
PFRMAT TS
TARGET T0352
AUTHOR SAM_T06_server
REMARK   6 
REMARK   6 T0352 model 2 Wed Jun 28 14:01:25 2006
METHOD The SAM-T06 server uses methods similar to SAM_T04 in CASP6 and
METHOD the SAM-T02 method in CASP5.
METHOD 
METHOD We start with a fully automated method:
METHOD    
METHOD     Use the SAM-T2K and SAM-T04 methods for finding homologs of the
METHOD       target and aligning them.
METHOD 
METHOD     Make local structure predictions using neural nets and the
METHOD       multiple alignments.  Different neural nets are used for the
METHOD       SAM-T2K alignments and the SAM-T04 alignments.
METHOD       We currently use 8 local-structure alphabets: 
METHOD 	DSSP
METHOD 	STRIDE
METHOD 	STR2	an extended version of DSSP that splits the beta strands
METHOD 		into multiple classes (parallel/antiparallel/mixed,
METHOD 					edge/center)
METHOD 	ALPHA	an discretization of the alpha torsion angle:
METHOD 		CA(i-i), CA(i), CA(i+1), CA(i+2)
METHOD 	BYS	a discretization of Ramachandran plots, due to Bystroff
METHOD 	CB_burial_14_7	a 7-state discretization of the number of C_beta
METHOD 		atoms in a 14 Angstrom radius sphere around the C_beta.
METHOD 	near-backbone-11 an 11-state discretization of the number of
METHOD 	      residues (represented by near-backbone points) in a 
METHOD 	      9.65 Angstrom radius sphere around the sidechain proxy
METHOD 	      spot for the residue.
METHOD 	DSSP_EHL2	CASP's collapse of the DSSP alphabet
METHOD 			DSSP_EHL2 is not predicted directly by a
METHOD 			neural net, but is computed as a weighted
METHOD 			average of the other backbone alphabet predictions. 
METHOD     
METHOD     We make 2-track HMMs with each alphabet (1.0 amino acid + 0.3 local structure)
METHOD       and use them to score a template library of 6400 (t04) or 9900 (t2k) templates
METHOD       We also used a single-track HMM to score not just the template
METHOD       library, but a non-redundant copy of the entire PDB.
METHOD 
METHOD     We also made a few 3-track HMMs (AA, str2, CB_burial_14_7 and 
METHOD       AA, str2, near-backbone-11) for finding and aligning more remote
METHOD       homologs.
METHOD     
METHOD     One-track HMMs built from the template library multiple alignments
METHOD        were used to score the target sequence (for early targets, only
METHOD        t2k template library was searched this way).
METHOD 
METHOD     All the logs of e-values were combined in a weighted average (with
METHOD        rather arbitrary weights, since we did not have time to
METHOD        optimize them), and the best templates ranked.  Ranking was
METHOD        separate for predictions from the t2k and t04 multiple alignments.
METHOD     
METHOD     Alignments of the target to the top templates were made using
METHOD       several different alignment methods (mainly using the SAM hmmscore
METHOD       program, but a few alignments were made with Bob Edgar's MUSCLE
METHOD       profile-profile aligner).
METHOD 
METHOD     Generate fragments (short 9-residue alignments for each position)
METHOD       using SAM's "fragfinder" program and the 3-track HMM.
METHOD 
METHOD     Then the "undertaker" program (named because it optimizes burial)
METHOD       is used to try to combine the alignments and the fragments into
METHOD       a consistent 3D model.  No single alignment or parent template
METHOD       was used, though in many cases one had much more influence than
METHOD       the others.  The alignment scores were not passed to undertaker,
METHOD       but were used only to pick the set of alignments and fragments
METHOD       that undertaker would see.  Helix and strand constraints
METHOD       generated from the secondary-structure predictions are passed to
METHOD       undertaker to use in the cost function.
METHOD 
METHOD     One important change in this server over previous methods is that
METHOD     sheet constraints are extracted from the top few alignments and
METHOD     passed to undertaker. 
METHOD -------------
MODEL  2
PARENT N/A
ATOM      2  N   PRO    57      24.447  16.575   3.044  1.00  0.00
ATOM      3  CA  PRO    57      24.039  16.104   4.360  1.00  0.00
ATOM      4  CB  PRO    57      24.978  16.837   5.322  1.00  0.00
ATOM      5  CG  PRO    57      26.212  17.088   4.521  1.00  0.00
ATOM      6  CD  PRO    57      25.745  17.420   3.131  1.00  0.00
ATOM      7  O   PRO    57      21.838  15.649   5.180  1.00  0.00
ATOM      8  C   PRO    57      22.581  16.454   4.621  1.00  0.00
ATOM      9  N   ARG    58      22.169  17.652   4.219  1.00  0.00
ATOM     10  CA  ARG    58      20.784  18.052   4.416  1.00  0.00
ATOM     11  CB  ARG    58      20.568  19.486   3.930  1.00  0.00
ATOM     12  CG  ARG    58      21.216  20.544   4.807  1.00  0.00
ATOM     13  CD  ARG    58      21.023  21.936   4.229  1.00  0.00
ATOM     14  NE  ARG    58      21.666  22.962   5.046  1.00  0.00
ATOM     15  CZ  ARG    58      21.710  24.252   4.726  1.00  0.00
ATOM     16  NH1 ARG    58      22.317  25.113   5.532  1.00  0.00
ATOM     17  NH2 ARG    58      21.148  24.676   3.603  1.00  0.00
ATOM     18  O   ARG    58      18.838  16.685   4.136  1.00  0.00
ATOM     19  C   ARG    58      19.871  17.120   3.632  1.00  0.00
ATOM     20  N   MET    59      20.258  16.817   2.397  1.00  0.00
ATOM     21  CA  MET    59      19.470  15.924   1.556  1.00  0.00
ATOM     22  CB  MET    59      20.145  15.737   0.196  1.00  0.00
ATOM     23  CG  MET    59      20.126  16.977  -0.682  1.00  0.00
ATOM     24  SD  MET    59      21.044  16.755  -2.220  1.00  0.00
ATOM     25  CE  MET    59      20.003  15.570  -3.067  1.00  0.00
ATOM     26  O   MET    59      18.242  14.015   2.340  1.00  0.00
ATOM     27  C   MET    59      19.339  14.566   2.232  1.00  0.00
ATOM     28  N   HIS    60      20.469  14.032   2.682  1.00  0.00
ATOM     29  CA  HIS    60      20.494  12.746   3.358  1.00  0.00
ATOM     30  CB  HIS    60      21.911  12.418   3.833  1.00  0.00
ATOM     31  CG  HIS    60      22.012  11.130   4.590  1.00  0.00
ATOM     32  CD2 HIS    60      22.184  10.758   5.988  1.00  0.00
ATOM     33  ND1 HIS    60      21.946   9.898   3.976  1.00  0.00
ATOM     34  CE1 HIS    60      22.066   8.937   4.910  1.00  0.00
ATOM     35  NE2 HIS    60      22.209   9.446   6.118  1.00  0.00
ATOM     36  O   HIS    60      18.737  11.870   4.742  1.00  0.00
ATOM     37  C   HIS    60      19.569  12.762   4.572  1.00  0.00
ATOM     38  N   ASP    61      19.720  13.781   5.411  1.00  0.00
ATOM     39  CA  ASP    61      18.895  13.901   6.606  1.00  0.00
ATOM     40  CB  ASP    61      19.333  15.105   7.441  1.00  0.00
ATOM     41  CG  ASP    61      20.653  14.872   8.151  1.00  0.00
ATOM     42  OD1 ASP    61      21.110  13.710   8.191  1.00  0.00
ATOM     43  OD2 ASP    61      21.231  15.852   8.667  1.00  0.00
ATOM     44  O   ASP    61      16.547  13.496   6.834  1.00  0.00
ATOM     45  C   ASP    61      17.439  14.085   6.222  1.00  0.00
ATOM     46  N   LEU    62      17.201  14.907   5.207  1.00  0.00
ATOM     47  CA  LEU    62      15.845  15.161   4.748  1.00  0.00
ATOM     48  CB  LEU    62      15.858  16.079   3.524  1.00  0.00
ATOM     49  CG  LEU    62      16.261  17.533   3.772  1.00  0.00
ATOM     50  CD1 LEU    62      16.415  18.280   2.456  1.00  0.00
ATOM     51  CD2 LEU    62      15.207  18.249   4.603  1.00  0.00
ATOM     52  O   LEU    62      14.071  13.553   4.834  1.00  0.00
ATOM     53  C   LEU    62      15.171  13.846   4.367  1.00  0.00
ATOM     54  N   LEU    63      15.835  13.058   3.525  1.00  0.00
ATOM     55  CA  LEU    63      15.287  11.776   3.093  1.00  0.00
ATOM     56  CB  LEU    63      16.261  11.070   2.146  1.00  0.00
ATOM     57  CG  LEU    63      16.444  11.703   0.766  1.00  0.00
ATOM     58  CD1 LEU    63      17.564  11.013   0.002  1.00  0.00
ATOM     59  CD2 LEU    63      15.167  11.585  -0.052  1.00  0.00
ATOM     60  O   LEU    63      14.023  10.196   4.376  1.00  0.00
ATOM     61  C   LEU    63      15.042  10.877   4.302  1.00  0.00
ATOM     62  N   ASP    64      15.980  10.884   5.245  1.00  0.00
ATOM     63  CA  ASP    64      15.858  10.078   6.453  1.00  0.00
ATOM     64  CB  ASP    64      17.070  10.289   7.364  1.00  0.00
ATOM     65  CG  ASP    64      18.324   9.630   6.827  1.00  0.00
ATOM     66  OD1 ASP    64      18.211   8.817   5.884  1.00  0.00
ATOM     67  OD2 ASP    64      19.420   9.926   7.347  1.00  0.00
ATOM     68  O   ASP    64      13.931   9.596   7.800  1.00  0.00
ATOM     69  C   ASP    64      14.602  10.458   7.233  1.00  0.00
ATOM     70  N   ASN    65      14.291  11.751   7.253  1.00  0.00
ATOM     71  CA  ASN    65      13.112  12.264   7.946  1.00  0.00
ATOM     72  CB  ASN    65      13.275  13.755   8.250  1.00  0.00
ATOM     73  CG  ASN    65      14.317  14.020   9.318  1.00  0.00
ATOM     74  ND2 ASN    65      14.923  15.201   9.271  1.00  0.00
ATOM     75  OD1 ASN    65      14.573  13.173  10.174  1.00  0.00
ATOM     76  O   ASN    65      10.848  12.733   7.288  1.00  0.00
ATOM     77  C   ASN    65      11.872  12.076   7.078  1.00  0.00
ATOM     78  N   LYS    66      11.977  11.183   6.098  1.00  0.00
ATOM     79  CA  LYS    66      10.884  10.887   5.175  1.00  0.00
ATOM     80  CB  LYS    66       9.636  10.451   5.946  1.00  0.00
ATOM     81  CG  LYS    66       9.837   9.208   6.799  1.00  0.00
ATOM     82  CD  LYS    66       8.536   8.771   7.452  1.00  0.00
ATOM     83  CE  LYS    66       8.757   7.596   8.391  1.00  0.00
ATOM     84  NZ  LYS    66       7.487   7.148   9.028  1.00  0.00
ATOM     85  O   LYS    66       9.312  12.187   3.900  1.00  0.00
ATOM     86  C   LYS    66      10.466  12.074   4.304  1.00  0.00
ATOM     87  N   GLN    67      11.414  12.956   4.006  1.00  0.00
ATOM     88  CA  GLN    67      11.130  14.112   3.161  1.00  0.00
ATOM     89  CB  GLN    67      12.105  15.251   3.465  1.00  0.00
ATOM     90  CG  GLN    67      12.033  15.766   4.894  1.00  0.00
ATOM     91  CD  GLN    67      10.702  16.420   5.210  1.00  0.00
ATOM     92  OE1 GLN    67      10.222  17.268   4.458  1.00  0.00
ATOM     93  NE2 GLN    67      10.101  16.027   6.327  1.00  0.00
ATOM     94  O   GLN    67      12.177  13.014   1.307  1.00  0.00
ATOM     95  C   GLN    67      11.264  13.742   1.685  1.00  0.00
ATOM     96  N   PRO    68      10.363  14.250   0.857  1.00  0.00
ATOM     97  CA  PRO    68      10.416  13.974  -0.570  1.00  0.00
ATOM     98  CB  PRO    68       9.314  12.936  -0.787  1.00  0.00
ATOM     99  CG  PRO    68       8.333  13.197   0.307  1.00  0.00
ATOM    100  CD  PRO    68       9.142  13.632   1.496  1.00  0.00
ATOM    101  O   PRO    68       9.307  16.055  -0.991  1.00  0.00
ATOM    102  C   PRO    68      10.156  15.252  -1.363  1.00  0.00
ATOM    103  N   LEU    69      10.892  15.431  -2.453  1.00  0.00
ATOM    104  CA  LEU    69      10.746  16.611  -3.295  1.00  0.00
ATOM    105  CB  LEU    69      11.588  16.470  -4.564  1.00  0.00
ATOM    106  CG  LEU    69      13.106  16.506  -4.380  1.00  0.00
ATOM    107  CD1 LEU    69      13.815  16.202  -5.690  1.00  0.00
ATOM    108  CD2 LEU    69      13.556  17.878  -3.901  1.00  0.00
ATOM    109  O   LEU    69       8.605  15.878  -4.107  1.00  0.00
ATOM    110  C   LEU    69       9.297  16.820  -3.716  1.00  0.00
ATOM    111  N   PRO    70       8.823  18.073  -3.643  1.00  0.00
ATOM    112  CA  PRO    70       7.452  18.425  -4.017  1.00  0.00
ATOM    113  CB  PRO    70       7.268  19.838  -3.462  1.00  0.00
ATOM    114  CG  PRO    70       8.641  20.422  -3.467  1.00  0.00
ATOM    115  CD  PRO    70       9.577  19.292  -3.137  1.00  0.00
ATOM    116  O   PRO    70       8.248  18.363  -6.271  1.00  0.00
ATOM    117  C   PRO    70       7.275  18.391  -5.530  1.00  0.00
ATOM    118  N   GLY    71       6.024  18.405  -6.006  1.00  0.00
ATOM    119  CA  GLY    71       5.774  18.381  -7.448  1.00  0.00
ATOM    120  O   GLY    71       5.835  20.767  -7.673  1.00  0.00
ATOM    121  C   GLY    71       6.175  19.683  -8.139  1.00  0.00
ATOM    122  N   ALA    72       6.924  19.588  -9.253  1.00  0.00
ATOM    123  CA  ALA    72       7.350  20.780  -9.994  1.00  0.00
ATOM    124  CB  ALA    72       8.155  20.382 -11.222  1.00  0.00
ATOM    125  O   ALA    72       5.034  21.058 -10.587  1.00  0.00
ATOM    126  C   ALA    72       6.134  21.591 -10.455  1.00  0.00
ATOM    127  N   PHE    73       6.337  22.880 -10.706  1.00  0.00
ATOM    128  CA  PHE    73       5.248  23.751 -11.138  1.00  0.00
ATOM    129  CB  PHE    73       5.780  25.144 -11.480  1.00  0.00
ATOM    130  CG  PHE    73       4.714  26.111 -11.909  1.00  0.00
ATOM    131  CD1 PHE    73       3.911  26.739 -10.972  1.00  0.00
ATOM    132  CD2 PHE    73       4.512  26.394 -13.249  1.00  0.00
ATOM    133  CE1 PHE    73       2.930  27.629 -11.366  1.00  0.00
ATOM    134  CE2 PHE    73       3.531  27.284 -13.643  1.00  0.00
ATOM    135  CZ  PHE    73       2.742  27.901 -12.708  1.00  0.00
ATOM    136  O   PHE    73       5.205  22.815 -13.356  1.00  0.00
ATOM    137  C   PHE    73       4.554  23.191 -12.375  1.00  0.00
ATOM    138  N   ALA    74       3.227  23.132 -12.310  1.00  0.00
ATOM    139  CA  ALA    74       2.416  22.627 -13.415  1.00  0.00
ATOM    140  CB  ALA    74       2.730  23.388 -14.694  1.00  0.00
ATOM    141  O   ALA    74       2.338  20.654 -14.781  1.00  0.00
ATOM    142  C   ALA    74       2.658  21.145 -13.697  1.00  0.00
ATOM    143  N   VAL    75       3.209  20.424 -12.727  1.00  0.00
ATOM    144  CA  VAL    75       3.474  19.002 -12.930  1.00  0.00
ATOM    145  CB  VAL    75       4.653  18.518 -12.064  1.00  0.00
ATOM    146  CG1 VAL    75       4.874  17.026 -12.250  1.00  0.00
ATOM    147  CG2 VAL    75       5.931  19.246 -12.448  1.00  0.00
ATOM    148  O   VAL    75       1.829  18.135 -11.432  1.00  0.00
ATOM    149  C   VAL    75       2.282  18.131 -12.575  1.00  0.00
ATOM    150  N   ALA    76       1.770  17.354 -13.544  1.00  0.00
ATOM    151  CA  ALA    76       0.622  16.476 -13.300  1.00  0.00
ATOM    152  CB  ALA    76       0.451  15.495 -14.450  1.00  0.00
ATOM    153  O   ALA    76       1.875  15.184 -11.711  1.00  0.00
ATOM    154  C   ALA    76       0.778  15.662 -12.018  1.00  0.00
ATOM    155  N   PRO    77      -0.317  15.501 -11.273  1.00  0.00
ATOM    156  CA  PRO    77      -0.283  14.737 -10.031  1.00  0.00
ATOM    157  CB  PRO    77      -1.726  14.789  -9.524  1.00  0.00
ATOM    158  CG  PRO    77      -2.270  16.063 -10.076  1.00  0.00
ATOM    159  CD  PRO    77      -1.688  16.203 -11.455  1.00  0.00
ATOM    160  O   PRO    77       0.951  12.764  -9.491  1.00  0.00
ATOM    161  C   PRO    77       0.167  13.300 -10.263  1.00  0.00
ATOM    162  N   TYR    78      -0.330  12.678 -11.320  1.00  0.00
ATOM    163  CA  TYR    78       0.037  11.298 -11.606  1.00  0.00
ATOM    164  CB  TYR    78      -0.625  10.825 -12.902  1.00  0.00
ATOM    165  CG  TYR    78      -0.273   9.407 -13.287  1.00  0.00
ATOM    166  CD1 TYR    78      -0.879   8.326 -12.660  1.00  0.00
ATOM    167  CD2 TYR    78       0.667   9.152 -14.278  1.00  0.00
ATOM    168  CE1 TYR    78      -0.563   7.027 -13.005  1.00  0.00
ATOM    169  CE2 TYR    78       0.996   7.859 -14.638  1.00  0.00
ATOM    170  CZ  TYR    78       0.372   6.794 -13.991  1.00  0.00
ATOM    171  OH  TYR    78       0.689   5.500 -14.338  1.00  0.00
ATOM    172  O   TYR    78       2.139  10.190 -11.303  1.00  0.00
ATOM    173  C   TYR    78       1.554  11.167 -11.763  1.00  0.00
ATOM    174  N   TYR    79       2.189  12.148 -12.406  1.00  0.00
ATOM    175  CA  TYR    79       3.638  12.103 -12.580  1.00  0.00
ATOM    176  CB  TYR    79       4.110  13.266 -13.454  1.00  0.00
ATOM    177  CG  TYR    79       5.605  13.292 -13.684  1.00  0.00
ATOM    178  CD1 TYR    79       6.199  12.431 -14.597  1.00  0.00
ATOM    179  CD2 TYR    79       6.416  14.179 -12.988  1.00  0.00
ATOM    180  CE1 TYR    79       7.564  12.447 -14.814  1.00  0.00
ATOM    181  CE2 TYR    79       7.782  14.210 -13.191  1.00  0.00
ATOM    182  CZ  TYR    79       8.353  13.333 -14.114  1.00  0.00
ATOM    183  OH  TYR    79       9.712  13.353 -14.328  1.00  0.00
ATOM    184  O   TYR    79       5.338  11.455 -11.025  1.00  0.00
ATOM    185  C   TYR    79       4.380  12.196 -11.258  1.00  0.00
ATOM    186  N   GLU    80       3.943  13.096 -10.387  1.00  0.00
ATOM    187  CA  GLU    80       4.609  13.224  -9.107  1.00  0.00
ATOM    188  CB  GLU    80       4.076  14.440  -8.344  1.00  0.00
ATOM    189  CG  GLU    80       4.778  14.699  -7.021  1.00  0.00
ATOM    190  CD  GLU    80       6.233  15.086  -7.199  1.00  0.00
ATOM    191  OE1 GLU    80       6.646  15.331  -8.352  1.00  0.00
ATOM    192  OE2 GLU    80       6.961  15.145  -6.186  1.00  0.00
ATOM    193  O   GLU    80       5.214  11.599  -7.457  1.00  0.00
ATOM    194  C   GLU    80       4.368  11.985  -8.272  1.00  0.00
ATOM    195  N   MET    81       3.218  11.347  -8.462  1.00  0.00
ATOM    196  CA  MET    81       2.949  10.138  -7.693  1.00  0.00
ATOM    197  CB  MET    81       1.533   9.630  -7.970  1.00  0.00
ATOM    198  CG  MET    81       0.435  10.519  -7.409  1.00  0.00
ATOM    199  SD  MET    81       0.512  10.671  -5.614  1.00  0.00
ATOM    200  CE  MET    81       0.055   9.012  -5.114  1.00  0.00
ATOM    201  O   MET    81       4.517   8.378  -7.283  1.00  0.00
ATOM    202  C   MET    81       3.964   9.093  -8.115  1.00  0.00
ATOM    203  N   ALA    82       4.208   9.004  -9.419  1.00  0.00
ATOM    204  CA  ALA    82       5.176   8.041  -9.914  1.00  0.00
ATOM    205  CB  ALA    82       5.277   8.122 -11.430  1.00  0.00
ATOM    206  O   ALA    82       7.317   7.429  -8.984  1.00  0.00
ATOM    207  C   ALA    82       6.555   8.343  -9.303  1.00  0.00
ATOM    208  N   LEU    83       6.862   9.628  -9.124  1.00  0.00
ATOM    209  CA  LEU    83       8.130  10.028  -8.532  1.00  0.00
ATOM    210  CB  LEU    83       8.240  11.553  -8.479  1.00  0.00
ATOM    211  CG  LEU    83       9.520  12.119  -7.861  1.00  0.00
ATOM    212  CD1 LEU    83      10.738  11.693  -8.665  1.00  0.00
ATOM    213  CD2 LEU    83       9.476  13.639  -7.834  1.00  0.00
ATOM    214  O   LEU    83       9.267   8.914  -6.730  1.00  0.00
ATOM    215  C   LEU    83       8.239   9.480  -7.115  1.00  0.00
ATOM    216  N   ALA    84       7.175   9.666  -6.337  1.00  0.00
ATOM    217  CA  ALA    84       7.136   9.185  -4.954  1.00  0.00
ATOM    218  CB  ALA    84       5.809   9.545  -4.305  1.00  0.00
ATOM    219  O   ALA    84       7.902   7.137  -3.970  1.00  0.00
ATOM    220  C   ALA    84       7.300   7.667  -4.900  1.00  0.00
ATOM    221  N   THR    85       6.764   6.972  -5.897  1.00  0.00
ATOM    222  CA  THR    85       6.872   5.518  -5.935  1.00  0.00
ATOM    223  CB  THR    85       6.022   4.919  -7.072  1.00  0.00
ATOM    224  CG2 THR    85       6.083   3.399  -7.037  1.00  0.00
ATOM    225  OG1 THR    85       4.659   5.333  -6.925  1.00  0.00
ATOM    226  O   THR    85       8.784   4.115  -5.610  1.00  0.00
ATOM    227  C   THR    85       8.319   5.114  -6.157  1.00  0.00
ATOM    228  N   ASP    86      12.036   1.571   1.023  1.00  0.00
ATOM    229  CA  ASP    86      12.333   0.160   0.773  1.00  0.00
ATOM    230  CB  ASP    86      11.195  -0.725   1.284  1.00  0.00
ATOM    231  CG  ASP    86      11.144  -0.792   2.798  1.00  0.00
ATOM    232  OD1 ASP    86      12.079  -0.278   3.448  1.00  0.00
ATOM    233  OD2 ASP    86      10.168  -1.358   3.335  1.00  0.00
ATOM    234  O   ASP    86      11.542   0.090  -1.485  1.00  0.00
ATOM    235  C   ASP    86      12.502  -0.054  -0.730  1.00  0.00
ATOM    236  N   HIS    87      13.702  -0.427  -1.162  1.00  0.00
ATOM    237  CA  HIS    87      13.960  -0.636  -2.587  1.00  0.00
ATOM    238  CB  HIS    87      15.397  -1.110  -2.808  1.00  0.00
ATOM    239  CG  HIS    87      16.427  -0.053  -2.555  1.00  0.00
ATOM    240  CD2 HIS    87      17.524   0.123  -1.613  1.00  0.00
ATOM    241  ND1 HIS    87      16.504   1.105  -3.298  1.00  0.00
ATOM    242  CE1 HIS    87      17.523   1.852  -2.839  1.00  0.00
ATOM    243  NE2 HIS    87      18.139   1.271  -1.828  1.00  0.00
ATOM    244  O   HIS    87      12.798  -1.642  -4.424  1.00  0.00
ATOM    245  C   HIS    87      13.048  -1.678  -3.222  1.00  0.00
ATOM    246  N   PRO    88      12.567  -2.616  -2.415  1.00  0.00
ATOM    247  CA  PRO    88      11.694  -3.664  -2.917  1.00  0.00
ATOM    248  CB  PRO    88      11.626  -4.670  -1.767  1.00  0.00
ATOM    249  CG  PRO    88      11.920  -3.864  -0.547  1.00  0.00
ATOM    250  CD  PRO    88      12.917  -2.820  -0.968  1.00  0.00
ATOM    251  O   PRO    88       9.609  -3.714  -4.093  1.00  0.00
ATOM    252  C   PRO    88      10.309  -3.136  -3.265  1.00  0.00
ATOM    253  N   GLN    89       9.930  -2.022  -2.644  1.00  0.00
ATOM    254  CA  GLN    89       8.626  -1.408  -2.869  1.00  0.00
ATOM    255  CB  GLN    89       8.234  -0.530  -1.679  1.00  0.00
ATOM    256  CG  GLN    89       8.053  -1.294  -0.377  1.00  0.00
ATOM    257  CD  GLN    89       7.780  -0.379   0.800  1.00  0.00
ATOM    258  OE1 GLN    89       7.922   0.839   0.701  1.00  0.00
ATOM    259  NE2 GLN    89       7.386  -0.967   1.925  1.00  0.00
ATOM    260  O   GLN    89       7.528  -0.183  -4.633  1.00  0.00
ATOM    261  C   GLN    89       8.602  -0.522  -4.117  1.00  0.00
ATOM    262  N   ARG    90      11.459  -0.808 -13.856  1.00  0.00
ATOM    263  CA  ARG    90      11.424  -0.024 -15.076  1.00  0.00
ATOM    264  CB  ARG    90      12.756  -0.130 -15.819  1.00  0.00
ATOM    265  CG  ARG    90      13.906   0.594 -15.138  1.00  0.00
ATOM    266  CD  ARG    90      15.214   0.377 -15.882  1.00  0.00
ATOM    267  NE  ARG    90      16.335   1.048 -15.226  1.00  0.00
ATOM    268  CZ  ARG    90      17.602   0.929 -15.606  1.00  0.00
ATOM    269  NH1 ARG    90      18.555   1.576 -14.951  1.00  0.00
ATOM    270  NH2 ARG    90      17.915   0.164 -16.644  1.00  0.00
ATOM    271  O   ARG    90       9.777   0.324 -16.760  1.00  0.00
ATOM    272  C   ARG    90      10.337  -0.485 -16.025  1.00  0.00
ATOM    273  N   ALA    91      10.027  -1.776 -16.016  1.00  0.00
ATOM    274  CA  ALA    91       8.977  -2.262 -16.894  1.00  0.00
ATOM    275  CB  ALA    91       8.895  -3.780 -16.833  1.00  0.00
ATOM    276  O   ALA    91       6.796  -1.316 -17.310  1.00  0.00
ATOM    277  C   ALA    91       7.634  -1.687 -16.476  1.00  0.00
ATOM    278  N   LEU    92       7.427  -1.605 -15.171  1.00  0.00
ATOM    279  CA  LEU    92       6.180  -1.067 -14.655  1.00  0.00
ATOM    280  CB  LEU    92       6.057  -1.346 -13.156  1.00  0.00
ATOM    281  CG  LEU    92       5.880  -2.810 -12.751  1.00  0.00
ATOM    282  CD1 LEU    92       5.926  -2.959 -11.237  1.00  0.00
ATOM    283  CD2 LEU    92       4.543  -3.346 -13.240  1.00  0.00
ATOM    284  O   LEU    92       5.085   1.017 -15.117  1.00  0.00
ATOM    285  C   LEU    92       6.144   0.446 -14.884  1.00  0.00
ATOM    286  N   ILE    93       7.310   1.085 -14.830  1.00  0.00
ATOM    287  CA  ILE    93       7.391   2.523 -15.048  1.00  0.00
ATOM    288  CB  ILE    93       8.819   3.050 -14.810  1.00  0.00
ATOM    289  CG1 ILE    93       9.193   2.924 -13.330  1.00  0.00
ATOM    290  CG2 ILE    93       8.919   4.513 -15.209  1.00  0.00
ATOM    291  CD1 ILE    93      10.660   3.168 -13.050  1.00  0.00
ATOM    292  O   ILE    93       6.191   3.721 -16.718  1.00  0.00
ATOM    293  C   ILE    93       6.993   2.831 -16.478  1.00  0.00
ATOM    294  N   LEU    94       7.532   2.076 -17.430  1.00  0.00
ATOM    295  CA  LEU    94       7.177   2.320 -18.815  1.00  0.00
ATOM    296  CB  LEU    94       7.916   1.349 -19.737  1.00  0.00
ATOM    297  CG  LEU    94       9.427   1.551 -19.865  1.00  0.00
ATOM    298  CD1 LEU    94      10.058   0.417 -20.658  1.00  0.00
ATOM    299  CD2 LEU    94       9.734   2.859 -20.578  1.00  0.00
ATOM    300  O   LEU    94       5.069   2.874 -19.821  1.00  0.00
ATOM    301  C   LEU    94       5.675   2.138 -19.040  1.00  0.00
ATOM    302  N   ALA    95       5.065   1.170 -18.355  1.00  0.00
ATOM    303  CA  ALA    95       3.635   0.924 -18.544  1.00  0.00
ATOM    304  CB  ALA    95       3.208  -0.324 -17.789  1.00  0.00
ATOM    305  O   ALA    95       1.811   2.470 -18.685  1.00  0.00
ATOM    306  C   ALA    95       2.784   2.081 -18.042  1.00  0.00
ATOM    307  N   GLU    96       3.167   2.614 -16.889  1.00  0.00
ATOM    308  CA  GLU    96       2.482   3.726 -16.265  1.00  0.00
ATOM    309  CB  GLU    96       3.112   4.051 -14.909  1.00  0.00
ATOM    310  CG  GLU    96       2.848   3.008 -13.837  1.00  0.00
ATOM    311  CD  GLU    96       3.587   3.299 -12.546  1.00  0.00
ATOM    312  OE1 GLU    96       4.364   4.277 -12.513  1.00  0.00
ATOM    313  OE2 GLU    96       3.390   2.550 -11.565  1.00  0.00
ATOM    314  O   GLU    96       1.591   5.673 -17.329  1.00  0.00
ATOM    315  C   GLU    96       2.575   4.957 -17.156  1.00  0.00
ATOM    316  N   LEU    97       3.754   5.200 -17.725  1.00  0.00
ATOM    317  CA  LEU    97       3.939   6.356 -18.605  1.00  0.00
ATOM    318  CB  LEU    97       5.418   6.527 -18.959  1.00  0.00
ATOM    319  CG  LEU    97       6.342   6.961 -17.820  1.00  0.00
ATOM    320  CD1 LEU    97       7.798   6.918 -18.262  1.00  0.00
ATOM    321  CD2 LEU    97       6.023   8.380 -17.378  1.00  0.00
ATOM    322  O   LEU    97       2.537   7.098 -20.407  1.00  0.00
ATOM    323  C   LEU    97       3.146   6.152 -19.886  1.00  0.00
ATOM    324  N   GLU    98       3.141   4.925 -20.397  1.00  0.00
ATOM    325  CA  GLU    98       2.379   4.642 -21.612  1.00  0.00
ATOM    326  CB  GLU    98       2.620   3.202 -22.071  1.00  0.00
ATOM    327  CG  GLU    98       4.012   2.954 -22.628  1.00  0.00
ATOM    328  CD  GLU    98       4.255   1.494 -22.959  1.00  0.00
ATOM    329  OE1 GLU    98       3.361   0.666 -22.683  1.00  0.00
ATOM    330  OE2 GLU    98       5.339   1.177 -23.492  1.00  0.00
ATOM    331  O   GLU    98       0.161   5.290 -22.246  1.00  0.00
ATOM    332  C   GLU    98       0.877   4.824 -21.367  1.00  0.00
ATOM    333  N   ALA   102       0.392   4.452 -20.186  1.00  0.00
ATOM    334  CA  ALA   102      -1.032   4.614 -19.910  1.00  0.00
ATOM    335  CB  ALA   102      -1.383   4.009 -18.560  1.00  0.00
ATOM    336  O   ALA   102      -2.440   6.495 -20.354  1.00  0.00
ATOM    337  C   ALA   102      -1.373   6.099 -19.896  1.00  0.00
ATOM    338  N   LEU   103      -0.462   6.920 -19.370  1.00  0.00
ATOM    339  CA  LEU   103      -0.682   8.369 -19.329  1.00  0.00
ATOM    340  CB  LEU   103       0.466   9.064 -18.595  1.00  0.00
ATOM    341  CG  LEU   103       0.556   8.818 -17.088  1.00  0.00
ATOM    342  CD1 LEU   103       1.835   9.412 -16.520  1.00  0.00
ATOM    343  CD2 LEU   103      -0.625   9.453 -16.369  1.00  0.00
ATOM    344  O   LEU   103      -1.637   9.718 -21.070  1.00  0.00
ATOM    345  C   LEU   103      -0.760   8.912 -20.756  1.00  0.00
ATOM    346  N   PHE   104       0.141   8.458 -21.621  1.00  0.00
ATOM    347  CA  PHE   104       0.136   8.913 -23.000  1.00  0.00
ATOM    348  CB  PHE   104       1.322   8.322 -23.764  1.00  0.00
ATOM    349  CG  PHE   104       1.383   8.740 -25.205  1.00  0.00
ATOM    350  CD1 PHE   104       1.873   9.986 -25.559  1.00  0.00
ATOM    351  CD2 PHE   104       0.951   7.889 -26.208  1.00  0.00
ATOM    352  CE1 PHE   104       1.930  10.371 -26.884  1.00  0.00
ATOM    353  CE2 PHE   104       1.007   8.275 -27.534  1.00  0.00
ATOM    354  CZ  PHE   104       1.495   9.510 -27.874  1.00  0.00
ATOM    355  O   PHE   104      -1.714   9.239 -24.490  1.00  0.00
ATOM    356  C   PHE   104      -1.154   8.484 -23.701  1.00  0.00
ATOM    357  N   ALA   105      -1.623   7.274 -23.409  1.00  0.00
ATOM    358  CA  ALA   105      -2.844   6.762 -24.023  1.00  0.00
ATOM    359  CB  ALA   105      -2.982   5.269 -23.764  1.00  0.00
ATOM    360  O   ALA   105      -5.085   7.604 -24.146  1.00  0.00
ATOM    361  C   ALA   105      -4.079   7.460 -23.455  1.00  0.00
ATOM    362  N   ASP   106      -4.003   7.890 -22.197  1.00  0.00
ATOM    363  CA  ASP   106      -5.124   8.576 -21.557  1.00  0.00
ATOM    364  CB  ASP   106      -5.657   7.753 -20.382  1.00  0.00
ATOM    365  CG  ASP   106      -6.927   8.332 -19.793  1.00  0.00
ATOM    366  OD1 ASP   106      -7.476   9.285 -20.386  1.00  0.00
ATOM    367  OD2 ASP   106      -7.375   7.833 -18.738  1.00  0.00
ATOM    368  O   ASP   106      -4.656  10.163 -19.817  1.00  0.00
ATOM    369  C   ASP   106      -4.692   9.935 -21.031  1.00  0.00
ATOM    370  N   ASP   107      -4.364  10.860 -21.950  1.00  0.00
ATOM    371  CA  ASP   107      -3.921  12.225 -21.651  1.00  0.00
ATOM    372  CB  ASP   107      -4.064  13.117 -22.885  1.00  0.00
ATOM    373  CG  ASP   107      -3.014  12.826 -23.941  1.00  0.00
ATOM    374  OD1 ASP   107      -2.035  12.117 -23.624  1.00  0.00
ATOM    375  OD2 ASP   107      -3.170  13.306 -25.082  1.00  0.00
ATOM    376  O   ASP   107      -4.119  13.767 -19.827  1.00  0.00
ATOM    377  C   ASP   107      -4.685  12.933 -20.534  1.00  0.00
ATOM    378  N   ALA   108      -5.965  12.622 -20.370  1.00  0.00
ATOM    379  CA  ALA   108      -6.719  13.286 -19.316  1.00  0.00
ATOM    380  CB  ALA   108      -8.168  12.825 -19.329  1.00  0.00
ATOM    381  O   ALA   108      -6.277  13.798 -17.024  1.00  0.00
ATOM    382  C   ALA   108      -6.151  12.987 -17.937  1.00  0.00
ATOM    383  N   SER   109      -5.505  11.833 -17.785  1.00  0.00
ATOM    384  CA  SER   109      -4.923  11.470 -16.498  1.00  0.00
ATOM    385  CB  SER   109      -4.265  10.090 -16.577  1.00  0.00
ATOM    386  OG  SER   109      -3.145  10.110 -17.444  1.00  0.00
ATOM    387  O   SER   109      -3.472  12.512 -14.897  1.00  0.00
ATOM    388  C   SER   109      -3.861  12.473 -16.064  1.00  0.00
ATOM    389  N   LEU   110      -3.398  13.282 -17.011  1.00  0.00
ATOM    390  CA  LEU   110      -2.364  14.278 -16.744  1.00  0.00
ATOM    391  CB  LEU   110      -1.431  14.418 -17.948  1.00  0.00
ATOM    392  CG  LEU   110      -0.645  13.166 -18.345  1.00  0.00
ATOM    393  CD1 LEU   110       0.160  13.417 -19.613  1.00  0.00
ATOM    394  CD2 LEU   110       0.321  12.766 -17.240  1.00  0.00
ATOM    395  O   LEU   110      -2.260  16.613 -16.171  1.00  0.00
ATOM    396  C   LEU   110      -2.975  15.647 -16.459  1.00  0.00
ATOM    397  N   GLU   111      -4.299  15.727 -16.544  1.00  0.00
ATOM    398  CA  GLU   111      -4.994  16.982 -16.295  1.00  0.00
ATOM    399  CB  GLU   111      -6.474  16.855 -16.661  1.00  0.00
ATOM    400  CG  GLU   111      -6.727  16.552 -18.128  1.00  0.00
ATOM    401  CD  GLU   111      -8.192  16.298 -18.427  1.00  0.00
ATOM    402  OE1 GLU   111      -9.007  16.337 -17.481  1.00  0.00
ATOM    403  OE2 GLU   111      -8.525  16.061 -19.607  1.00  0.00
ATOM    404  O   GLU   111      -4.835  18.556 -14.503  1.00  0.00
ATOM    405  C   GLU   111      -4.899  17.374 -14.830  1.00  0.00
TER
END



