
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms  147 (  147),  selected  147 , name T0303TS168_1-D1
# Molecule2: number of CA atoms  147 ( 1151),  selected  147 , name T0303_D1.pdb
# PARAMETERS: T0303TS168_1-D1.T0303_D1.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:   147         1 - 224         4.81     4.81
  LCS_AVERAGE:    100.00

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    52       147 - 198         1.98     5.38
  LONGEST_CONTINUOUS_SEGMENT:    52       148 - 199         1.98     5.36
  LCS_AVERAGE:     25.06

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    15       173 - 187         0.85     5.70
  LONGEST_CONTINUOUS_SEGMENT:    15       174 - 188         0.96     5.45
  LCS_AVERAGE:      5.78

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  147
LCS_GDT     M       1     M       1      3    6  147     3    3    4    6   12   16   50   78   91  105  124  127  132  136  138  140  141  142  142  142 
LCS_GDT     T       2     T       2      3    6  147     3    3    4   10   34   42   64   88  105  120  127  132  135  137  139  140  141  142  142  142 
LCS_GDT     Q       3     Q       3      4   11  147     3   11   27   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     F       4     F       4      5   11  147     5   12   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     K       5     K       5      5   11  147     3   12   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     L       6     L       6      5   11  147     3   12   28   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     I       7     I       7      5   11  147     3    5   19   40   67   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     G       8     G       8      5   11  147     3   15   29   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     F       9     F       9      5   11  147     3    5    9   14   36   60   92  108  119  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     D      10     D      10      4   24  147     3    4    6   24   51   80   97  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     L      11     L      11      4   27  147    10   15   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     D      12     D      12      6   27  147     4    7   21   43   67   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     G      13     G      13      6   45  147     4   10   28   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     T      14     T      14      6   45  147     4   11   25   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     L      15     L      15      6   45  147     4    9   21   43   67   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     V      16     V      16      6   45  147     4    9   21   40   67   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     N      17     N      17      6   45  147     4    7   25   40   63   88  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     R      95     R      95      3   45  147     5   12   24   35   62   85  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     L      96     L      96      7   45  147     4   15   29   48   66   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     Y      97     Y      97      7   45  147     3   15   27   48   66   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     P      98     P      98      7   45  147     3    7    9   29   51   75   95  113  121  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     N      99     N      99     12   45  147     5   16   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     V     100     V     100     12   45  147    10   19   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     K     101     K     101     12   45  147    10   19   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     E     102     E     102     12   45  147    10   19   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     T     103     T     103     12   45  147    10   19   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     L     104     L     104     12   45  147    10   19   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     E     105     E     105     12   45  147    10   19   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     A     106     A     106     12   45  147    10   19   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     L     107     L     107     12   45  147    10   19   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     K     108     K     108     12   45  147    10   19   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     A     109     A     109     12   45  147    10   19   31   48   67   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     Q     110     Q     110     12   45  147     3   13   30   48   69   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     G     111     G     111      3   45  147     3    5   14   27   48   63   79  105  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     Y     112     Y     112      3   45  147     3   16   29   48   66   88  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     I     113     I     113      6   45  147     3    6   16   32   44   63   82  109  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     L     114     L     114      6   45  147     3    5    9   27   41   53   76  105  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     A     115     A     115      6   45  147     3    5   14   25   44   66   91  111  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     V     116     V     116      6   45  147     3    8   12   25   44   61   80  111  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     V     117     V     117      6   45  147     3    8   15   32   44   61   80  111  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     T     118     T     118      6   45  147     3   10   21   44   68   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     N     119     N     119     13   45  147     4   17   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     K     120     K     120     13   45  147     4    7   25   48   67   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     P     121     P     121     13   45  147     4   10   28   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     T     122     T     122     13   45  147     8   19   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     K     123     K     123     13   45  147     4   19   31   48   67   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     H     124     H     124     13   45  147     8   19   31   48   68   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     V     125     V     125     13   45  147     8   19   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     Q     126     Q     126     13   45  147     6   12   28   48   67   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     P     127     P     127     13   45  147     6   17   31   48   67   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     I     128     I     128     13   45  147     6   16   31   48   67   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     L     129     L     129     13   45  147     6   16   29   48   67   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     T     130     T     130     13   45  147     6   16   27   48   66   88  103  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     A     131     A     131     13   45  147     6   16   29   48   66   88  104  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     F     132     F     132     12   45  147     3   14   29   48   67   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     G     133     G     133      5   45  147     3   16   29   48   67   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     I     134     I     134      5   45  147     4   16   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     D     135     D     135      5   42  147     4    8   19   28   36   71   96  112  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     H     136     H     136      5   42  147     4    4    9   26   53   77   97  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     L     137     L     137      5   26  147     4    4   20   46   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     F     138     F     138      5    8  147     4    5    8   40   68   87  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     S     139     S     139      4    8  147     3    4    8   34   60   86  104  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     E     140     E     140      5    8  147     4   11   23   31   44   68   90  111  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     M     141     M     141      5    8  147     4    9   19   29   55   76  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     L     142     L     142      5    8  147     4    9   18   28   53   75   97  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     G     143     G     143      5   11  147     4    7   14   30   56   78   94  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     G     144     G     144      5   11  147     3    4    9   27   53   75   97  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     Q     145     Q     145      7   51  147     4    9   27   48   67   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     S     146     S     146      7   51  147     4    6   25   48   67   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     L     147     L     147      7   52  147     4   10   25   44   67   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     P     148     P     148      7   52  147     8   14   26   46   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     E     149     E     149      7   52  147     3    8   24   48   68   90  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     I     150     I     150      7   52  147     3   12   24   46   69   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     K     151     K     151      7   52  147     4   15   29   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     P     152     P     152      5   52  147     3   12   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     H     153     H     153      4   52  147     5   17   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     P     154     P     154     13   52  147    11   16   29   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     A     155     A     155     13   52  147    11   15   29   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     P     156     P     156     13   52  147    11   15   29   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     F     157     F     157     13   52  147    11   15   29   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     Y     158     Y     158     13   52  147    11   15   29   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     Y     159     Y     159     13   52  147    11   15   29   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     L     160     L     160     13   52  147    11   15   29   48   70   87  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     C     161     C     161     13   52  147    11   15   29   48   70   88  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     G     162     G     162     13   52  147    11   15   29   48   70   90  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     K     163     K     163     13   52  147    11   15   26   48   70   87  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     F     164     F     164     13   52  147    11   14   24   48   70   90  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     G     165     G     165     13   52  147     4   15   26   48   70   88  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     L     166     L     166     13   52  147     4   11   29   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     Y     167     Y     167      5   52  147     3   13   21   33   58   81   99  111  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     P     168     P     168      5   52  147     3    6   24   39   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     K     169     K     169      5   52  147     3   10   24   42   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     Q     170     Q     170      5   52  147     3    4   16   31   63   87  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     I     171     I     171      7   52  147     5   16   29   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     L     172     L     172      7   52  147     5   16   29   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     F     173     F     173     15   52  147     4   15   29   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     V     174     V     174     15   52  147     5   15   29   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     G     175     G     175     15   52  147     4   15   29   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     D     176     D     176     15   52  147     8   19   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     S     177     S     177     15   52  147     6   19   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     Q     178     Q     178     15   52  147     6   14   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     N     179     N     179     15   52  147     6   19   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     D     180     D     180     15   52  147     8   14   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     I     181     I     181     15   52  147     8   14   30   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     F     182     F     182     15   52  147     8   14   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     A     183     A     183     15   52  147     8   14   29   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     A     184     A     184     15   52  147     8   14   26   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     H     185     H     185     15   52  147     8   14   24   46   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     S     186     S     186     15   52  147     8   14   24   42   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     A     187     A     187     15   52  147     3   12   24   43   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     G     188     G     188     15   52  147     3   11   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     C     189     C     189     13   52  147     4   15   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     A     190     A     190     13   52  147     5   13   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     V     191     V     191     13   52  147     5   19   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     V     192     V     192     13   52  147     8   19   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     G     193     G     193     13   52  147     3   12   29   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     L     194     L     194     10   52  147     6   10   25   41   65   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     T     195     T     195      5   52  147     3    3   12   40   62   88  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     Y     196     Y     196      4   52  147     3   10   25   41   66   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     G     197     G     197      4   52  147     3    8   19   38   65   89  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     Y     198     Y     198      4   52  147     3    7   20   36   60   86  105  113  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     N     199     N     199      4   52  147     3    5   14   32   59   82  105  113  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     Y     200     Y     200      3    6  147     3    3    4    7   10   11   13   28   35   80   99  118  127  136  138  140  141  142  142  142 
LCS_GDT     N     201     N     201      3    6  147     3    3    6   11   39   60   74   92  105  123  129  133  136  138  139  140  141  142  142  142 
LCS_GDT     I     202     I     202      3    6  147     3    3   17   39   57   79   94  113  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     P     203     P     203      5    8  147     4   10   23   42   65   85  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     I     204     I     204      5    8  147     8   19   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     A     205     A     205      5    8  147     8   19   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     Q     206     Q     206      5    8  147     4   12   31   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     S     207     S     207      5    8  147     3   11   24   48   70   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     K     208     K     208      4    8  147     3    4   12   27   58   84  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     P     209     P     209      4    8  147     3    7   24   47   68   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     D     210     D     210      4    8  147     3   10   31   47   68   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     W     211     W     211      4    6  147     3    4    5    7   25   49   78  107  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     I     212     I     212      3    6  147     3   19   31   48   69   91  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     F     213     F     213      3    6  147     3   10   23   41   64   84  105  115  124  128  132  134  136  138  139  140  141  142  142  142 
LCS_GDT     D     214     D     214      3    6  147     3    3   12   26   38   54   71   84  101  117  129  134  136  138  139  140  141  142  142  142 
LCS_GDT     D     215     D     215      3    6  147     3    3    4   26   38   54   75   92  112  126  131  134  136  138  139  140  141  142  142  142 
LCS_GDT     F     216     F     216      5    9  147     3    4   11   25   33   54   70   86  105  117  131  134  136  138  139  140  141  142  142  142 
LCS_GDT     A     217     A     217      7    9  147     3    4    7   11   20   38   48   65   91  110  116  126  135  138  139  140  141  142  142  142 
LCS_GDT     D     218     D     218      7    9  147     3    6    7    8   33   49   67   88  119  127  132  133  136  138  139  140  141  142  142  142 
LCS_GDT     I     219     I     219      7    9  147     5    6    7   16   23   36   55   63   95  108  123  130  134  137  139  139  141  142  142  142 
LCS_GDT     L     220     L     220      7    9  147     5    6    7    8   11   20   25   32   45   59   81   97  119  127  134  136  138  139  140  141 
LCS_GDT     K     221     K     221      7    9  147     5    6    7    8   11   20   25   29   49   70   78   93  103  116  129  133  135  138  139  141 
LCS_GDT     I     222     I     222      7    9  147     5    6    7    8   10   10   11   11   27   35   42   47   54   61   65  106  115  121  128  137 
LCS_GDT     T     223     T     223      7    9  147     5    6    7    8   10   10   11   11   12   23   24   28   45   49   65   75   82   91   98  102 
LCS_GDT     Q     224     Q     224      3    9  147     3    3    3    6   10   10   11   11   12   14   14   17   18   18   18   46   49   54   56   63 
LCS_AVERAGE  LCS_A:  43.61  (   5.78   25.06  100.00 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA     11     19     31     48     70     91    105    115    124    128    132    134    136    138    139    140    141    142    142    142 
GDT PERCENT_CA   7.48  12.93  21.09  32.65  47.62  61.90  71.43  78.23  84.35  87.07  89.80  91.16  92.52  93.88  94.56  95.24  95.92  96.60  96.60  96.60
GDT RMS_LOCAL    0.29   0.66   0.99   1.45   1.85   2.14   2.33   2.53   2.75   2.83   2.96   3.04   3.15   3.24   3.30   3.39   3.48   3.55   3.55   3.55
GDT RMS_ALL_CA   5.86   4.91   4.96   5.08   4.97   4.92   4.90   4.89   4.88   4.89   4.85   4.86   4.88   4.86   4.88   4.90   4.92   4.90   4.90   4.90

#      Molecule1      Molecule2       DISTANCE
LGA    M       1      M       1         11.055
LGA    T       2      T       2          8.500
LGA    Q       3      Q       3          3.387
LGA    F       4      F       4          1.926
LGA    K       5      K       5          1.791
LGA    L       6      L       6          1.931
LGA    I       7      I       7          3.026
LGA    G       8      G       8          1.539
LGA    F       9      F       9          4.750
LGA    D      10      D      10          3.903
LGA    L      11      L      11          1.081
LGA    D      12      D      12          2.772
LGA    G      13      G      13          1.949
LGA    T      14      T      14          2.606
LGA    L      15      L      15          2.556
LGA    V      16      V      16          2.784
LGA    N      17      N      17          3.114
LGA    R      95      R      95          3.669
LGA    L      96      L      96          2.567
LGA    Y      97      Y      97          2.721
LGA    P      98      P      98          4.832
LGA    N      99      N      99          1.545
LGA    V     100      V     100          0.818
LGA    K     101      K     101          0.789
LGA    E     102      E     102          1.201
LGA    T     103      T     103          1.424
LGA    L     104      L     104          0.741
LGA    E     105      E     105          1.116
LGA    A     106      A     106          1.710
LGA    L     107      L     107          1.376
LGA    K     108      K     108          1.122
LGA    A     109      A     109          2.018
LGA    Q     110      Q     110          1.349
LGA    G     111      G     111          5.720
LGA    Y     112      Y     112          2.525
LGA    I     113      I     113          5.219
LGA    L     114      L     114          5.371
LGA    A     115      A     115          4.846
LGA    V     116      V     116          4.988
LGA    V     117      V     117          4.869
LGA    T     118      T     118          3.321
LGA    N     119      N     119          2.015
LGA    K     120      K     120          2.549
LGA    P     121      P     121          2.026
LGA    T     122      T     122          1.615
LGA    K     123      K     123          1.645
LGA    H     124      H     124          1.009
LGA    V     125      V     125          1.577
LGA    Q     126      Q     126          2.814
LGA    P     127      P     127          2.361
LGA    I     128      I     128          1.917
LGA    L     129      L     129          2.772
LGA    T     130      T     130          3.621
LGA    A     131      A     131          3.490
LGA    F     132      F     132          2.281
LGA    G     133      G     133          1.669
LGA    I     134      I     134          0.818
LGA    D     135      D     135          4.415
LGA    H     136      H     136          3.983
LGA    L     137      L     137          2.890
LGA    F     138      F     138          3.781
LGA    S     139      S     139          3.967
LGA    E     140      E     140          4.673
LGA    M     141      M     141          3.503
LGA    L     142      L     142          3.885
LGA    G     143      G     143          4.035
LGA    G     144      G     144          3.882
LGA    Q     145      Q     145          3.014
LGA    S     146      S     146          3.285
LGA    L     147      L     147          3.516
LGA    P     148      P     148          3.191
LGA    E     149      E     149          3.618
LGA    I     150      I     150          3.388
LGA    K     151      K     151          2.088
LGA    P     152      P     152          2.159
LGA    H     153      H     153          2.547
LGA    P     154      P     154          2.325
LGA    A     155      A     155          2.829
LGA    P     156      P     156          2.873
LGA    F     157      F     157          2.822
LGA    Y     158      Y     158          2.860
LGA    Y     159      Y     159          3.092
LGA    L     160      L     160          3.631
LGA    C     161      C     161          3.494
LGA    G     162      G     162          3.533
LGA    K     163      K     163          3.817
LGA    F     164      F     164          3.349
LGA    G     165      G     165          3.949
LGA    L     166      L     166          2.944
LGA    Y     167      Y     167          4.861
LGA    P     168      P     168          3.097
LGA    K     169      K     169          3.223
LGA    Q     170      Q     170          3.161
LGA    I     171      I     171          1.887
LGA    L     172      L     172          1.972
LGA    F     173      F     173          1.951
LGA    V     174      V     174          1.734
LGA    G     175      G     175          1.757
LGA    D     176      D     176          0.747
LGA    S     177      S     177          0.258
LGA    Q     178      Q     178          1.594
LGA    N     179      N     179          1.515
LGA    D     180      D     180          0.335
LGA    I     181      I     181          1.483
LGA    F     182      F     182          1.750
LGA    A     183      A     183          1.395
LGA    A     184      A     184          2.261
LGA    H     185      H     185          2.811
LGA    S     186      S     186          2.970
LGA    A     187      A     187          2.887
LGA    G     188      G     188          2.147
LGA    C     189      C     189          1.694
LGA    A     190      A     190          1.540
LGA    V     191      V     191          1.012
LGA    V     192      V     192          0.911
LGA    G     193      G     193          1.664
LGA    L     194      L     194          3.292
LGA    T     195      T     195          3.363
LGA    Y     196      Y     196          3.222
LGA    G     197      G     197          3.276
LGA    Y     198      Y     198          5.009
LGA    N     199      N     199          5.253
LGA    Y     200      Y     200         11.084
LGA    N     201      N     201          8.546
LGA    I     202      I     202          5.903
LGA    P     203      P     203          3.092
LGA    I     204      I     204          1.151
LGA    A     205      A     205          1.471
LGA    Q     206      Q     206          1.892
LGA    S     207      S     207          3.658
LGA    K     208      K     208          4.052
LGA    P     209      P     209          2.467
LGA    D     210      D     210          1.985
LGA    W     211      W     211          5.063
LGA    I     212      I     212          1.928
LGA    F     213      F     213          3.750
LGA    D     214      D     214          8.189
LGA    D     215      D     215          7.001
LGA    F     216      F     216          7.164
LGA    A     217      A     217          8.208
LGA    D     218      D     218          6.306
LGA    I     219      I     219          8.051
LGA    L     220      L     220         11.841
LGA    K     221      K     221         13.408
LGA    I     222      I     222         16.757
LGA    T     223      T     223         18.913
LGA    Q     224      Q     224         24.532

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)  147  147    4.0    115    2.53    54.762    52.493     4.367

LGA_LOCAL      RMSD =  2.533  Number of atoms =  115  DIST =   4.00
LGA_ALL_ATOMS  RMSD =  4.857  Number of atoms =  147 
Std_ALL_ATOMS  RMSD =  4.808  (standard rmsd on all 147 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =   0.286487 * X  +   0.603279 * Y  +  -0.744298 * Z  +  -9.614388
  Y_new =   0.528874 * X  +  -0.747354 * Y  +  -0.402187 * Z  +  79.403839
  Z_new =  -0.798885 * X  +  -0.278419 * Y  +  -0.533166 * Z  +  16.243246 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =  -2.660344    0.481249  [ DEG:  -152.4265     27.5735 ]
  Theta =   0.925439    2.216153  [ DEG:    53.0238    126.9762 ]
  Phi   =   1.074354   -2.067238  [ DEG:    61.5560   -118.4440 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0303TS168_1-D1                               
REMARK     2: T0303_D1.pdb                                  
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0303TS168_1-D1.T0303_D1.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:  147  147   4.0  115   2.53  52.493     4.81
REMARK  ---------------------------------------------------------- 
MOLECULE T0303TS168_1-D1
PFRMAT TS
TARGET T0303
MODEL 1
PARENT N/A
ATOM      1  CA  MET     1     -16.666  48.591  10.212  1.00 25.00           C
ATOM      2  CA  THR     2     -15.109  51.292   8.045  1.00 25.00           C
ATOM      3  CA  GLN     3     -15.644  54.899   9.053  1.00 25.00           C
ATOM      4  CA  PHE     4     -16.408  58.124  10.933  1.00 25.00           C
ATOM      5  CA  LYS     5     -15.361  58.052  14.615  1.00 25.00           C
ATOM      6  CA  LEU     6     -12.717  60.294  16.168  1.00 25.00           C
ATOM      7  CA  ILE     7     -12.286  64.111  16.196  1.00 25.00           C
ATOM      8  CA  GLY     8     -10.187  67.054  14.969  1.00 25.00           C
ATOM      9  CA  PHE     9      -8.512  68.651  17.984  1.00 25.00           C
ATOM     10  CA  ASP    10      -8.677  72.149  19.348  1.00 25.00           C
ATOM     11  CA  LEU    11     -10.303  75.519  19.777  1.00 25.00           C
ATOM     12  CA  ASP    12     -10.757  77.630  16.644  1.00 25.00           C
ATOM     13  CA  GLY    13     -13.706  79.447  15.070  1.00 25.00           C
ATOM     14  CA  THR    14     -16.543  77.210  14.046  1.00 25.00           C
ATOM     15  CA  LEU    15     -15.722  74.595  16.744  1.00 25.00           C
ATOM     16  CA  VAL    16     -15.097  77.163  19.516  1.00 25.00           C
ATOM     17  CA  ASN    17     -15.442  80.806  20.705  1.00 25.00           C
ATOM     95  CA  ARG    95     -20.069  81.383  25.948  1.00 25.00           C
ATOM     96  CA  LEU    96     -18.858  78.938  23.317  1.00 25.00           C
ATOM     97  CA  TYR    97     -20.379  80.177  20.096  1.00 25.00           C
ATOM     98  CA  PRO    98     -23.949  79.185  21.117  1.00 25.00           C
ATOM     99  CA  ASN    99     -24.512  77.126  17.927  1.00 25.00           C
ATOM    100  CA  VAL   100     -21.209  75.239  17.926  1.00 25.00           C
ATOM    101  CA  LYS   101     -22.506  73.205  20.900  1.00 25.00           C
ATOM    102  CA  GLU   102     -25.522  72.061  18.833  1.00 25.00           C
ATOM    103  CA  THR   103     -23.197  71.024  15.971  1.00 25.00           C
ATOM    104  CA  LEU   104     -21.010  69.060  18.427  1.00 25.00           C
ATOM    105  CA  GLU   105     -24.115  67.310  19.830  1.00 25.00           C
ATOM    106  CA  ALA   106     -25.244  66.414  16.282  1.00 25.00           C
ATOM    107  CA  LEU   107     -21.768  65.007  15.506  1.00 25.00           C
ATOM    108  CA  LYS   108     -21.867  62.923  18.717  1.00 25.00           C
ATOM    109  CA  ALA   109     -25.329  61.586  17.773  1.00 25.00           C
ATOM    110  CA  GLN   110     -24.378  58.305  16.037  1.00 25.00           C
ATOM    111  CA  GLY   111     -23.243  59.755  12.701  1.00 25.00           C
ATOM    112  CA  TYR   112     -19.932  60.403  14.397  1.00 25.00           C
ATOM    113  CA  ILE   113     -17.218  63.134  14.530  1.00 25.00           C
ATOM    114  CA  LEU   114     -16.731  66.893  14.753  1.00 25.00           C
ATOM    115  CA  ALA   115     -14.375  68.865  17.002  1.00 25.00           C
ATOM    116  CA  VAL   116     -12.057  71.717  15.837  1.00 25.00           C
ATOM    117  CA  VAL   117      -8.691  72.120  14.099  1.00 25.00           C
ATOM    118  CA  THR   118      -5.960  74.442  15.322  1.00 25.00           C
ATOM    119  CA  ASN   119      -2.612  74.576  17.093  1.00 25.00           C
ATOM    120  CA  LYS   120      -4.712  75.821  19.994  1.00 25.00           C
ATOM    121  CA  PRO   121      -3.015  77.138  23.105  1.00 25.00           C
ATOM    122  CA  THR   122      -2.441  73.718  24.688  1.00 25.00           C
ATOM    123  CA  LYS   123      -3.100  73.972  28.452  1.00 25.00           C
ATOM    124  CA  HIS   124      -5.526  76.876  27.856  1.00 25.00           C
ATOM    125  CA  VAL   125      -7.345  74.837  25.173  1.00 25.00           C
ATOM    126  CA  GLN   126      -7.610  71.866  27.575  1.00 25.00           C
ATOM    127  CA  PRO   127      -9.020  74.161  30.297  1.00 25.00           C
ATOM    128  CA  ILE   128     -11.587  75.559  27.822  1.00 25.00           C
ATOM    129  CA  LEU   129     -12.607  72.002  26.833  1.00 25.00           C
ATOM    130  CA  THR   130     -13.006  71.063  30.524  1.00 25.00           C
ATOM    131  CA  ALA   131     -15.170  74.170  31.106  1.00 25.00           C
ATOM    132  CA  PHE   132     -18.278  75.416  29.360  1.00 25.00           C
ATOM    133  CA  GLY   133     -20.552  72.369  29.981  1.00 25.00           C
ATOM    134  CA  ILE   134     -18.860  71.084  26.842  1.00 25.00           C
ATOM    135  CA  ASP   135     -19.541  67.544  28.171  1.00 25.00           C
ATOM    136  CA  HIS   136     -19.341  65.751  24.793  1.00 25.00           C
ATOM    137  CA  LEU   137     -16.489  68.065  23.706  1.00 25.00           C
ATOM    138  CA  PHE   138     -14.633  67.355  26.980  1.00 25.00           C
ATOM    139  CA  SER   139     -15.084  63.589  26.448  1.00 25.00           C
ATOM    140  CA  GLU   140     -13.737  63.908  22.877  1.00 25.00           C
ATOM    141  CA  MET   141     -11.116  66.683  22.421  1.00 25.00           C
ATOM    142  CA  LEU   142      -7.395  66.070  22.429  1.00 25.00           C
ATOM    143  CA  GLY   143      -4.394  68.440  22.663  1.00 25.00           C
ATOM    144  CA  GLY   144      -2.391  71.065  20.841  1.00 25.00           C
ATOM    145  CA  GLN   145       1.341  71.561  21.242  1.00 25.00           C
ATOM    146  CA  SER   146       2.649  67.971  21.281  1.00 25.00           C
ATOM    147  CA  LEU   147       5.173  68.545  18.451  1.00 25.00           C
ATOM    148  CA  PRO   148       8.023  71.099  18.306  1.00 25.00           C
ATOM    149  CA  GLU   149       5.732  73.167  16.075  1.00 25.00           C
ATOM    150  CA  ILE   150       2.699  74.251  14.021  1.00 25.00           C
ATOM    151  CA  LYS   151      -0.218  74.174  11.494  1.00 25.00           C
ATOM    152  CA  PRO   152       1.678  72.882   8.440  1.00 25.00           C
ATOM    153  CA  HIS   153       2.385  69.138   8.132  1.00 25.00           C
ATOM    154  CA  PRO   154       0.561  68.829  11.456  1.00 25.00           C
ATOM    155  CA  ALA   155       2.162  67.657  14.732  1.00 25.00           C
ATOM    156  CA  PRO   156      -0.990  68.663  16.661  1.00 25.00           C
ATOM    157  CA  PHE   157      -3.163  66.742  14.160  1.00 25.00           C
ATOM    158  CA  TYR   158      -0.924  63.659  14.544  1.00 25.00           C
ATOM    159  CA  TYR   159      -1.195  63.906  18.356  1.00 25.00           C
ATOM    160  CA  LEU   160      -5.007  64.159  18.093  1.00 25.00           C
ATOM    161  CA  CYS   161      -5.078  61.080  15.817  1.00 25.00           C
ATOM    162  CA  GLY   162      -2.908  59.152  18.316  1.00 25.00           C
ATOM    163  CA  LYS   163      -5.258  60.157  21.169  1.00 25.00           C
ATOM    164  CA  PHE   164      -8.279  58.991  19.124  1.00 25.00           C
ATOM    165  CA  GLY   165      -6.886  55.458  18.911  1.00 25.00           C
ATOM    166  CA  LEU   166      -6.574  55.793  15.165  1.00 25.00           C
ATOM    167  CA  TYR   167      -9.480  55.541  12.792  1.00 25.00           C
ATOM    168  CA  PRO   168      -8.176  57.879  10.024  1.00 25.00           C
ATOM    169  CA  LYS   169     -11.318  57.732   7.839  1.00 25.00           C
ATOM    170  CA  GLN   170     -12.512  61.069   9.290  1.00 25.00           C
ATOM    171  CA  ILE   171      -9.927  62.972  11.250  1.00 25.00           C
ATOM    172  CA  LEU   172     -11.793  66.046  10.024  1.00 25.00           C
ATOM    173  CA  PHE   173     -11.768  69.818  10.621  1.00 25.00           C
ATOM    174  CA  VAL   174     -13.884  72.836  11.233  1.00 25.00           C
ATOM    175  CA  GLY   175     -11.701  75.806  12.067  1.00 25.00           C
ATOM    176  CA  ASP   176     -11.323  78.851   9.857  1.00 25.00           C
ATOM    177  CA  SER   177      -7.655  78.938   8.740  1.00 25.00           C
ATOM    178  CA  GLN   178      -6.489  77.097   5.638  1.00 25.00           C
ATOM    179  CA  ASN   179      -3.664  75.799   7.874  1.00 25.00           C
ATOM    180  CA  ASP   180      -6.195  73.831   9.970  1.00 25.00           C
ATOM    181  CA  ILE   181      -7.698  72.326   6.786  1.00 25.00           C
ATOM    182  CA  PHE   182      -4.203  71.330   5.576  1.00 25.00           C
ATOM    183  CA  ALA   183      -3.471  69.695   8.961  1.00 25.00           C
ATOM    184  CA  ALA   184      -6.778  67.772   8.775  1.00 25.00           C
ATOM    185  CA  HIS   185      -5.919  66.589   5.235  1.00 25.00           C
ATOM    186  CA  SER   186      -2.469  65.437   6.430  1.00 25.00           C
ATOM    187  CA  ALA   187      -4.392  62.400   7.674  1.00 25.00           C
ATOM    188  CA  GLY   188      -5.856  60.963   4.537  1.00 25.00           C
ATOM    189  CA  CYS   189      -9.010  62.573   5.792  1.00 25.00           C
ATOM    190  CA  ALA   190     -12.242  64.489   5.217  1.00 25.00           C
ATOM    191  CA  VAL   191     -12.152  68.274   5.558  1.00 25.00           C
ATOM    192  CA  VAL   192     -14.288  71.434   5.522  1.00 25.00           C
ATOM    193  CA  GLY   193     -14.962  74.993   6.481  1.00 25.00           C
ATOM    194  CA  LEU   194     -17.988  75.586   8.692  1.00 25.00           C
ATOM    195  CA  THR   195     -16.409  79.046   9.235  1.00 25.00           C
ATOM    196  CA  TYR   196     -19.048  81.424  10.712  1.00 25.00           C
ATOM    197  CA  GLY   197     -16.133  83.161  12.428  1.00 25.00           C
ATOM    198  CA  TYR   198     -13.804  83.311   9.429  1.00 25.00           C
ATOM    199  CA  ASN   199     -11.992  84.074   6.208  1.00 25.00           C
ATOM    200  CA  TYR   200     -14.578  82.852   3.714  1.00 25.00           C
ATOM    201  CA  ASN   201     -12.910  84.295   0.617  1.00 25.00           C
ATOM    202  CA  ILE   202      -9.867  83.860  -1.667  1.00 25.00           C
ATOM    203  CA  PRO   203      -7.756  82.725   1.320  1.00 25.00           C
ATOM    204  CA  ILE   204     -10.467  80.208   2.311  1.00 25.00           C
ATOM    205  CA  ALA   205     -10.572  78.870  -1.276  1.00 25.00           C
ATOM    206  CA  GLN   206      -6.759  78.505  -1.278  1.00 25.00           C
ATOM    207  CA  SER   207      -6.993  74.873  -2.334  1.00 25.00           C
ATOM    208  CA  LYS   208      -6.908  71.272  -1.143  1.00 25.00           C
ATOM    209  CA  PRO   209      -9.134  71.143   1.993  1.00 25.00           C
ATOM    210  CA  ASP   210     -11.975  70.736  -0.503  1.00 25.00           C
ATOM    211  CA  TRP   211     -12.039  74.399   0.561  1.00 25.00           C
ATOM    212  CA  ILE   212     -15.363  75.978   1.446  1.00 25.00           C
ATOM    213  CA  PHE   213     -19.097  76.823   1.586  1.00 25.00           C
ATOM    214  CA  ASP   214     -21.521  73.966   0.930  1.00 25.00           C
ATOM    215  CA  ASP   215     -22.077  73.007   4.558  1.00 25.00           C
ATOM    216  CA  PHE   216     -25.220  72.620   6.551  1.00 25.00           C
ATOM    217  CA  ALA   217     -27.127  74.944   4.176  1.00 25.00           C
ATOM    218  CA  ASP   218     -27.774  77.390   7.051  1.00 25.00           C
ATOM    219  CA  ILE   219     -24.057  77.328   7.973  1.00 25.00           C
ATOM    220  CA  LEU   220     -23.116  78.014   4.324  1.00 25.00           C
ATOM    221  CA  LYS   221     -25.574  80.949   4.216  1.00 25.00           C
ATOM    222  CA  ILE   222     -24.077  82.355   7.448  1.00 25.00           C
ATOM    223  CA  THR   223     -20.554  82.044   5.981  1.00 25.00           C
ATOM    224  CA  GLN   224     -18.775  85.400   6.025  1.00 25.00           C
TER
END
