 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0082.inter 
# 
NUMBER-OF-PARENTS      1 
ALIGNMENT-DALI(1)      ../PARENTS/casp3.T0082.1bol.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
           TARGET 1495 atoms, MODEL 1495 atoms, 1495 common with TARGET 
           Number of atoms possible to evaluate: 1347 
 
 
 CA-RMS TARGET<->PARENT(1bol)	 2.220320 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    57.88           70.4   328    86.8   378     ARMSMC  
     WELL ORDERED  . . . . .    56.15           71.7   321    86.5   371     ARMSMC  
     NO INTER CONTACTS . . .    56.21           69.1   246    89.1   276     ARMSMC  
     SHIFTED CHAIN . . . . .    63.15           65.0   254    84.1   302     ARMSMC  
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSMC  
     SECONDARY STRUCTURE . .    38.27           84.5   194    95.1   204     ARMSMC  
     LARGE SHIFTS/INSERTIONS    83.19           42.9    77    64.2   120     ARMSMC  
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSMC  
     SURFACE . . . . . . . .    63.47           64.7   170    81.7   208     ARMSMC  
     BURIED  . . . . . . . .    51.19           76.6   158    92.9   170     ARMSMC  
     CORE  . . . . . . . . .    47.49           78.9   251    97.3   258     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    67.19           61.8   144    88.9   162     ARMSSC1 
     WELL ORDERED  . . . . .    64.39           64.4   132    89.2   148     ARMSSC1 
     NO INTER CONTACTS . . .    67.02           62.4   109    91.6   119     ARMSSC1 
     RELIABLE SIDE CHAINS  .    69.11           59.6   136    88.3   154     ARMSSC1 
     CHANGED ANGLES  . . . .    76.93           48.1    79    84.9    93     ARMSSC1 
     SHIFTED CHAIN . . . . .    71.55           57.3   110    86.6   127     ARMSSC1 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SECONDARY STRUCTURE . .    62.81           66.3    86    96.6    89     ARMSSC1 
     LARGE SHIFTS/INSERTIONS    72.01           54.3    35    68.6    51     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .    74.09           51.4    74    84.1    88     ARMSSC1 
     BURIED  . . . . . . . .    59.02           72.9    70    94.6    74     ARMSSC1 
     CORE  . . . . . . . . .    65.56           64.2   109    98.2   111     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    66.51           62.5   104    90.4   115     ARMSSC2 
     WELL ORDERED  . . . . .    66.05           63.4    93    92.1   101     ARMSSC2 
     NO INTER CONTACTS . . .    59.79           67.1    79    91.9    86     ARMSSC2 
     RELIABLE SIDE CHAINS  .    53.20           69.2    78    89.7    87     ARMSSC2 
     CHANGED ANGLES  . . . .    72.91           52.2    69    86.2    80     ARMSSC2 
     SHIFTED CHAIN . . . . .    68.11           59.7    77    87.5    88     ARMSSC2 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SECONDARY STRUCTURE . .    67.18           65.2    66    98.5    67     ARMSSC2 
     LARGE SHIFTS/INSERTIONS    79.21           52.4    21    70.0    30     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .    76.99           46.0    50    84.7    59     ARMSSC2 
     BURIED  . . . . . . . .    55.06           77.8    54    96.4    56     ARMSSC2 
     CORE  . . . . . . . . .    62.89           65.1    83    97.6    85     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    89.60           33.3    33    91.7    36     ARMSSC3 
     WELL ORDERED  . . . . .    80.17           33.3    18    94.7    19     ARMSSC3 
     NO INTER CONTACTS . . .    99.29           33.3    21    95.5    22     ARMSSC3 
     RELIABLE SIDE CHAINS  .    84.15           42.9    21    95.5    22     ARMSSC3 
     CHANGED ANGLES  . . . .    90.52           30.0    30    90.9    33     ARMSSC3 
     SHIFTED CHAIN . . . . .    87.21           34.6    26    89.7    29     ARMSSC3 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SECONDARY STRUCTURE . .    81.60           39.1    23    95.8    24     ARMSSC3 
     LARGE SHIFTS/INSERTIONS   106.69           25.0     8    80.0    10     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .    92.47           34.8    23    88.5    26     ARMSSC3 
     BURIED  . . . . . . . .    82.61           30.0    10   100.0    10     ARMSSC3 
     CORE  . . . . . . . . .    83.39           36.0    25    96.2    26     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    68.80           50.0    18    94.7    19     ARMSSC4 
     WELL ORDERED  . . . . .    87.62           50.0     8    88.9     9     ARMSSC4 
     NO INTER CONTACTS . . .    75.88           63.6    11   100.0    11     ARMSSC4 
     RELIABLE SIDE CHAINS  .    68.80           50.0    18    94.7    19     ARMSSC4 
     CHANGED ANGLES  . . . .    70.68           47.1    17    94.4    18     ARMSSC4 
     SHIFTED CHAIN . . . . .    72.27           50.0    16    94.1    17     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SECONDARY STRUCTURE . .    75.28           41.7    12   100.0    12     ARMSSC4 
     LARGE SHIFTS/INSERTIONS    56.96           60.0     5    83.3     6     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .    50.44           53.3    15    93.8    16     ARMSSC4 
     BURIED  . . . . . . . .   125.22           33.3     3   100.0     3     ARMSSC4 
     CORE  . . . . . . . . .    72.84           46.2    13   100.0    13     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =   0.70649     r(1,2) =  -0.25113     r(1,3) =   0.66167 
 r(2,1) =  -0.59265     r(2,2) =  -0.72095     r(2,3) =   0.35917 
 r(3,1) =   0.38683     r(3,2) =  -0.64588     r(3,3) =  -0.65818 
THE OFFSET VECTOR: 
 v(1) =   4.09588     v(2) =  78.19863     v(3) =  31.68792 
 
 Number of iteration 54                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.31           (Number of atoms:   99) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    6.59        169    88.9   190     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0390                            CRMSCA  
     WELL ORDERED  . . . . .    6.62        166    88.8   187     CRMSCA  
     NO INTER CONTACTS . . .    6.81        127    91.4   139     CRMSCA  
     SHIFTED CHAIN . . . . .    6.52        132    86.8   152     CRMSCA  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSCA  
     SECONDARY STRUCTURE . .    6.38         99    97.1   102     CRMSCA  
     SHIFTED SS UNITS  . . .    3.09         53    98.1    54     CRMSCA  
     LARGE SHIFTS/INSERTIONS    7.87         41    68.3    60     CRMSCA  
     SURFACE . . . . . . . .    6.62         88    84.6   104     CRMSCA  
     BURIED  . . . . . . . .    6.56         81    94.2    86     CRMSCA  
     CORE  . . . . . . . . .    6.12        128    98.5   130     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    6.65        833    89.1   935     CRMSMC  
     WELL ORDERED  . . . . .    6.68        815    88.9   917     CRMSMC  
     NO INTER CONTACTS . . .    6.90        625    91.5   683     CRMSMC  
     SHIFTED CHAIN . . . . .    6.59        649    87.0   746     CRMSMC  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSMC  
     SECONDARY STRUCTURE . .    6.41        491    97.0   506     CRMSMC  
     SHIFTED SS UNITS  . . .    3.11        262    98.1   267     CRMSMC  
     LARGE SHIFTS/INSERTIONS    8.02        201    68.6   293     CRMSMC  
     SURFACE . . . . . . . .    6.66        434    84.8   512     CRMSMC  
     BURIED  . . . . . . . .    6.64        399    94.3   423     CRMSMC  
     CORE  . . . . . . . . .    6.15        632    98.4   642     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    7.38        671    91.3   735     CRMSSC  
     WELL ORDERED  . . . . .    7.08        596    91.6   651     CRMSSC  
     NO INTER CONTACTS . . .    7.13        509    92.7   549     CRMSSC  
     RELIABLE SIDE CHAINS  .    7.07        569    91.0   625     CRMSSC  
     CHANGED ANGLES  . . . .    8.21        327    88.9   368     CRMSSC  
     SECONDARY STRUCTURE . .    6.66        417    97.9   426     CRMSSC  
     LARGE SHIFTS/INSERTIONS    9.88        141    71.9   196     CRMSSC  
     SURFACE . . . . . . . .    8.25        322    87.5   368     CRMSSC  
     BURIED  . . . . . . . .    6.48        349    95.1   367     CRMSSC  
     CORE  . . . . . . . . .    6.56        530    98.3   539     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    6.97       1347    90.1  1495     CRMSALL 
     WELL ORDERED  . . . . .    6.82       1259    90.1  1398     CRMSALL 
     NO INTER CONTACTS . . .    6.98       1017    92.0  1105     CRMSALL 
     SHIFTED CHAIN . . . . .    7.08       1023    87.8  1165     CRMSALL 
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSALL 
     SECONDARY STRUCTURE . .    6.50        813    97.5   834     CRMSALL 
     LARGE SHIFTS/INSERTIONS    8.86        305    70.0   436     CRMSALL 
     SURFACE . . . . . . . .    7.39        674    86.0   784     CRMSALL 
     BURIED  . . . . . . . .    6.53        673    94.7   711     CRMSALL 
     CORE  . . . . . . . . .    6.32       1042    98.4  1059     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     7.75      7    38.9    18      13-AVCSFQKSGSCPGSGLRT-30   
 CA  LOOP  2     4.72     10    55.6    18      43-TSLTNCPGSPFDITKISH-60   
 CA  LOOP  3     4.46      5   100.0     5      93-ESTFN-97   
 CA  LOOP  4     4.13      3   100.0     3     127-GRT-129  
 CA  LOOP  5    14.10      7   100.0     7     153-TDPQTKV-159  
 CA  LOOP  6     7.69      3   100.0     3     171-QDG-173  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     7.71     34    39.1    87      13-AVCSFQKSGSCPGSGLRT-30   
 MC  LOOP  2     4.75     50    56.2    89      43-TSLTNCPGSPFDITKISH-60   
 MC  LOOP  3     4.76     25   100.0    25      93-ESTFN-97   
 MC  LOOP  4     4.12     14   100.0    14     127-GRT-129  
 MC  LOOP  5    14.30     35   100.0    35     153-TDPQTKV-159  
 MC  LOOP  6     8.07     14   100.0    14     171-QDG-173  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     8.55     48    39.3   122      13-AVCSFQKSGSCPGSGLRT-30   
 ALL LOOP  2     5.59     76    57.1   133      43-TSLTNCPGSPFDITKISH-60   
 ALL LOOP  3     7.27     41   100.0    41      93-ESTFN-97   
 ALL LOOP  4     5.76     22   100.0    22     127-GRT-129  
 ALL LOOP  5    14.90     54   100.0    54     153-TDPQTKV-159  
 ALL LOOP  6     8.06     21   100.0    21     171-QDG-173  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     2.82      7    38.9    18      13-AVCSFQKSGSCPGSGLRT-30   
 CA  LOOP  2     3.62     10    55.6    18      43-TSLTNCPGSPFDITKISH-60   
 CA  LOOP  3     3.15      5   100.0     5      93-ESTFN-97   
 CA  LOOP  4     0.13      3   100.0     3     127-GRT-129  
 CA  LOOP  5     4.25      7   100.0     7     153-TDPQTKV-159  
 CA  LOOP  6     0.59      3   100.0     3     171-QDG-173  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     3.26     34    39.1    87      13-AVCSFQKSGSCPGSGLRT-30   
 MC  LOOP  2     3.77     50    56.2    89      43-TSLTNCPGSPFDITKISH-60   
 MC  LOOP  3     3.55     25   100.0    25      93-ESTFN-97   
 MC  LOOP  4     0.76     14   100.0    14     127-GRT-129  
 MC  LOOP  5     4.71     35   100.0    35     153-TDPQTKV-159  
 MC  LOOP  6     1.46     14   100.0    14     171-QDG-173  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     4.73     48    39.3   122      13-AVCSFQKSGSCPGSGLRT-30   
 ALL LOOP  2     4.59     76    57.1   133      43-TSLTNCPGSPFDITKISH-60   
 ALL LOOP  3     5.45     41   100.0    41      93-ESTFN-97   
 ALL LOOP  4     2.22     22   100.0    22     127-GRT-129  
 ALL LOOP  5     6.35     54   100.0    54     153-TDPQTKV-159  
 ALL LOOP  6     2.82     21   100.0    21     171-QDG-173  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    4.344      1.000       0.500    169    88.9   190     ERRCA  
     WELL ORDERED  . . . . .    4.341      1.000       0.500    166    88.8   187     ERRCA  
     NO INTER CONTACTS . . .    4.342      1.000       0.500    127    91.4   139     ERRCA  
     SHIFTED CHAIN . . . . .    4.668      1.000       0.500    132    86.8   152     ERRCA  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRCA  
     SECONDARY STRUCTURE . .    3.648      1.000       0.500     99    97.1   102     ERRCA  
     LARGE SHIFTS/INSERTIONS    6.629      1.000       0.500     41    68.3    60     ERRCA  
     SURFACE . . . . . . . .    4.902      1.000       0.500     88    84.6   104     ERRCA  
     BURIED  . . . . . . . .    3.738      1.000       0.500     81    94.2    86     ERRCA  
     CORE  . . . . . . . . .    3.612      1.000       0.500    128    98.5   130     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    4.394      1.000       0.500    833    89.1   935     ERRMC  
     WELL ORDERED  . . . . .    4.386      1.000       0.500    815    88.9   917     ERRMC  
     NO INTER CONTACTS . . .    4.430      1.000       0.500    625    91.5   683     ERRMC  
     SHIFTED CHAIN . . . . .    4.724      1.000       0.500    649    87.0   746     ERRMC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRMC  
     SECONDARY STRUCTURE . .    3.681      1.000       0.500    491    97.0   506     ERRMC  
     LARGE SHIFTS/INSERTIONS    6.744      1.000       0.500    201    68.6   293     ERRMC  
     SURFACE . . . . . . . .    4.924      1.000       0.500    434    84.8   512     ERRMC  
     BURIED  . . . . . . . .    3.817      1.000       0.500    399    94.3   423     ERRMC  
     CORE  . . . . . . . . .    3.646      1.000       0.500    632    98.4   642     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.125      1.000       0.500    671    91.3   735     ERRSC  
     WELL ORDERED  . . . . .    4.766      1.000       0.500    596    91.6   651     ERRSC  
     NO INTER CONTACTS . . .    4.796      1.000       0.500    509    92.7   549     ERRSC  
     RELIABLE SIDE CHAINS  .    4.913      1.000       0.500    569    91.0   625     ERRSC  
     CHANGED ANGLES  . . . .    6.262      1.000       0.500    327    88.9   368     ERRSC  
     SHIFTED CHAIN . . . . .    5.739      1.000       0.500    495    88.9   557     ERRSC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRSC  
     SECONDARY STRUCTURE . .    4.128      1.000       0.500    417    97.9   426     ERRSC  
     LARGE SHIFTS/INSERTIONS    8.727      1.000       0.500    141    71.9   196     ERRSC  
     SURFACE . . . . . . . .    6.436      1.000       0.500    322    87.5   368     ERRSC  
     BURIED  . . . . . . . .    3.915      1.000       0.500    349    95.1   367     ERRSC  
     CORE  . . . . . . . . .    4.166      1.000       0.500    530    98.3   539     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    4.713      1.000       0.500   1347    90.1  1495     ERRALL 
     WELL ORDERED  . . . . .    4.522      1.000       0.500   1259    90.1  1398     ERRALL 
     NO INTER CONTACTS . . .    4.579      1.000       0.500   1017    92.0  1105     ERRALL 
     SHIFTED CHAIN . . . . .    5.164      1.000       0.500   1023    87.8  1165     ERRALL 
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRALL 
     SECONDARY STRUCTURE . .    3.878      1.000       0.500    813    97.5   834     ERRALL 
     LARGE SHIFTS/INSERTIONS    7.574      1.000       0.500    305    70.0   436     ERRALL 
     SURFACE . . . . . . . .    5.579      1.000       0.500    674    86.0   784     ERRALL 
     BURIED  . . . . . . . .    3.846      1.000       0.500    673    94.7   711     ERRALL 
     CORE  . . . . . . . . .    3.876      1.000       0.500   1042    98.4  1059     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        38        90       102       122       152     169     190   DISTCA 
CA  (P)     20.00     47.37     53.68     64.21     80.00             190   DISTCA 
CA  (RMS)    0.73      1.18      1.38      2.15      4.09                   DISTCA 
 
ALL (N)       273       640       762       914      1163    1347    1495   DISTALL 
ALL (P)     18.26     42.81     50.97     61.14     77.79            1495   DISTALL 
ALL (RMS)    0.71      1.20      1.46      2.11      4.08                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         130           128            41          RMSLSI 
CA  (P)       68.42         67.37         21.58          RMSLSI 
CA  (RMS)      1.44          6.12          7.87          RMSLSI 
 
 
 
END of the results output 
