 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0082.inter 
# 
NUMBER-OF-PARENTS      1 
ALIGNMENT-DALI(1)      ../PARENTS/casp3.T0082.1bol.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
           TARGET 1495 atoms, MODEL 1495 atoms, 1495 common with TARGET 
           Number of atoms possible to evaluate: 1448 
 
 
 CA-RMS TARGET<->PARENT(1bol)	 2.220320 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    72.27           53.8   366    96.8   378     ARMSMC  
     WELL ORDERED  . . . . .    70.64           54.9   359    96.8   371     ARMSMC  
     NO INTER CONTACTS . . .    71.02           51.9   264    95.7   276     ARMSMC  
     SHIFTED CHAIN . . . . .    77.07           50.3   290    96.0   302     ARMSMC  
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSMC  
     SECONDARY STRUCTURE . .    61.76           68.2   198    97.1   204     ARMSMC  
     LARGE SHIFTS/INSERTIONS    93.24           35.3   116    96.7   120     ARMSMC  
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSMC  
     SURFACE . . . . . . . .    79.85           51.5   202    97.1   208     ARMSMC  
     BURIED  . . . . . . . .    61.68           56.7   164    96.5   170     ARMSMC  
     CORE  . . . . . . . . .    60.11           62.4   250    96.9   258     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    81.01           47.5   158    97.5   162     ARMSSC1 
     WELL ORDERED  . . . . .    78.34           50.7   144    97.3   148     ARMSSC1 
     NO INTER CONTACTS . . .    83.95           47.0   115    96.6   119     ARMSSC1 
     RELIABLE SIDE CHAINS  .    79.91           48.0   150    97.4   154     ARMSSC1 
     CHANGED ANGLES  . . . .    94.78           28.6    91    97.8    93     ARMSSC1 
     SHIFTED CHAIN . . . . .    79.47           48.0   123    96.9   127     ARMSSC1 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SECONDARY STRUCTURE . .    75.51           51.2    86    96.6    89     ARMSSC1 
     LARGE SHIFTS/INSERTIONS    85.81           42.0    50    98.0    51     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .    81.49           46.0    87    98.9    88     ARMSSC1 
     BURIED  . . . . . . . .    80.42           49.3    71    95.9    74     ARMSSC1 
     CORE  . . . . . . . . .    78.70           50.0   108    97.3   111     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    78.17           41.4   111    96.5   115     ARMSSC2 
     WELL ORDERED  . . . . .    75.09           44.3    97    96.0   101     ARMSSC2 
     NO INTER CONTACTS . . .    77.13           42.7    82    95.3    86     ARMSSC2 
     RELIABLE SIDE CHAINS  .    73.83           41.7    84    96.6    87     ARMSSC2 
     CHANGED ANGLES  . . . .    86.36           33.3    78    97.5    80     ARMSSC2 
     SHIFTED CHAIN . . . . .    82.63           36.9    84    95.5    88     ARMSSC2 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SECONDARY STRUCTURE . .    75.56           46.9    64    95.5    67     ARMSSC2 
     LARGE SHIFTS/INSERTIONS    81.75           37.9    29    96.7    30     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .    87.26           31.0    58    98.3    59     ARMSSC2 
     BURIED  . . . . . . . .    66.82           52.8    53    94.6    56     ARMSSC2 
     CORE  . . . . . . . . .    76.87           42.7    82    96.5    85     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    87.85           22.2    36   100.0    36     ARMSSC3 
     WELL ORDERED  . . . . .    76.57           15.8    19   100.0    19     ARMSSC3 
     NO INTER CONTACTS . . .    86.87           18.2    22   100.0    22     ARMSSC3 
     RELIABLE SIDE CHAINS  .    71.03           27.3    22   100.0    22     ARMSSC3 
     CHANGED ANGLES  . . . .    91.24           18.2    33   100.0    33     ARMSSC3 
     SHIFTED CHAIN . . . . .    93.94           17.2    29   100.0    29     ARMSSC3 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SECONDARY STRUCTURE . .    81.00           20.8    24   100.0    24     ARMSSC3 
     LARGE SHIFTS/INSERTIONS   102.73           10.0    10   100.0    10     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .    92.01           30.8    26   100.0    26     ARMSSC3 
     BURIED  . . . . . . . .    75.96            0.0    10   100.0    10     ARMSSC3 
     CORE  . . . . . . . . .    81.40           26.9    26   100.0    26     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    98.98           10.5    19   100.0    19     ARMSSC4 
     WELL ORDERED  . . . . .   111.26            0.0     9   100.0     9     ARMSSC4 
     NO INTER CONTACTS . . .   101.40            9.1    11   100.0    11     ARMSSC4 
     RELIABLE SIDE CHAINS  .    98.98           10.5    19   100.0    19     ARMSSC4 
     CHANGED ANGLES  . . . .   101.04           11.1    18   100.0    18     ARMSSC4 
     SHIFTED CHAIN . . . . .   102.39           11.8    17   100.0    17     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SECONDARY STRUCTURE . .   111.91            8.3    12   100.0    12     ARMSSC4 
     LARGE SHIFTS/INSERTIONS    73.50           33.3     6   100.0     6     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .    90.84           12.5    16   100.0    16     ARMSSC4 
     BURIED  . . . . . . . .   134.30            0.0     3   100.0     3     ARMSSC4 
     CORE  . . . . . . . . .   108.74            0.0    13   100.0    13     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =   0.75674     r(1,2) =  -0.31400     r(1,3) =   0.57337 
 r(2,1) =  -0.57237     r(2,2) =  -0.74198     r(2,3) =   0.34909 
 r(3,1) =   0.31582     r(3,2) =  -0.59235     r(3,3) =  -0.74120 
THE OFFSET VECTOR: 
 v(1) =   4.00299     v(2) =  78.17347     v(3) =  33.46362 
 
 Number of iteration 64                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.06           (Number of atoms:   68) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   14.32        184    96.8   190     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0778                            CRMSCA  
     WELL ORDERED  . . . . .   14.35        181    96.8   187     CRMSCA  
     NO INTER CONTACTS . . .   14.41        133    95.7   139     CRMSCA  
     SHIFTED CHAIN . . . . .   14.27        146    96.1   152     CRMSCA  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSCA  
     SECONDARY STRUCTURE . .   12.90         99    97.1   102     CRMSCA  
     SHIFTED SS UNITS  . . .    5.84         51    94.4    54     CRMSCA  
     LARGE SHIFTS/INSERTIONS   16.26         58    96.7    60     CRMSCA  
     SURFACE . . . . . . . .   14.34        101    97.1   104     CRMSCA  
     BURIED  . . . . . . . .   14.29         83    96.5    86     CRMSCA  
     CORE  . . . . . . . . .   13.33        126    96.9   130     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   14.40        906    96.9   935     CRMSMC  
     WELL ORDERED  . . . . .   14.45        888    96.8   917     CRMSMC  
     NO INTER CONTACTS . . .   14.52        654    95.8   683     CRMSMC  
     SHIFTED CHAIN . . . . .   14.33        717    96.1   746     CRMSMC  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSMC  
     SECONDARY STRUCTURE . .   12.95        491    97.0   506     CRMSMC  
     SHIFTED SS UNITS  . . .    5.81        252    94.4   267     CRMSMC  
     LARGE SHIFTS/INSERTIONS   16.37        283    96.6   293     CRMSMC  
     SURFACE . . . . . . . .   14.39        498    97.3   512     CRMSMC  
     BURIED  . . . . . . . .   14.42        408    96.5   423     CRMSMC  
     CORE  . . . . . . . . .   13.42        623    97.0   642     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   15.38        712    96.9   735     CRMSSC  
     WELL ORDERED  . . . . .   15.46        629    96.6   651     CRMSSC  
     NO INTER CONTACTS . . .   15.44        526    95.8   549     CRMSSC  
     RELIABLE SIDE CHAINS  .   15.58        604    96.6   625     CRMSSC  
     CHANGED ANGLES  . . . .   15.79        355    96.5   368     CRMSSC  
     SECONDARY STRUCTURE . .   13.45        411    96.5   426     CRMSSC  
     LARGE SHIFTS/INSERTIONS   16.54        191    97.4   196     CRMSSC  
     SURFACE . . . . . . . .   15.96        363    98.6   368     CRMSSC  
     BURIED  . . . . . . . .   14.74        349    95.1   367     CRMSSC  
     CORE  . . . . . . . . .   14.93        521    96.7   539     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   14.83       1448    96.9  1495     CRMSALL 
     WELL ORDERED  . . . . .   14.87       1352    96.7  1398     CRMSALL 
     NO INTER CONTACTS . . .   14.93       1058    95.7  1105     CRMSALL 
     SHIFTED CHAIN . . . . .   14.47       1118    96.0  1165     CRMSALL 
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSALL 
     SECONDARY STRUCTURE . .   13.16        807    96.8   834     CRMSALL 
     LARGE SHIFTS/INSERTIONS   16.38        423    97.0   436     CRMSALL 
     SURFACE . . . . . . . .   15.08        767    97.8   784     CRMSALL 
     BURIED  . . . . . . . .   14.55        681    95.8   711     CRMSALL 
     CORE  . . . . . . . . .   14.15       1025    96.8  1059     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1    19.12     18   100.0    18      13-AVCSFQKSGSCPGSGLRT-30   
 CA  LOOP  2     7.67     18   100.0    18      43-TSLTNCPGSPFDITKISH-60   
 CA  LOOP  3     3.99      5   100.0     5      93-ESTFN-97   
 CA  LOOP  4     5.05      3   100.0     3     127-GRT-129  
 CA  LOOP  5    28.19      7   100.0     7     153-TDPQTKV-159  
 CA  LOOP  6    22.59      3   100.0     3     171-QDG-173  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1    19.17     87   100.0    87      13-AVCSFQKSGSCPGSGLRT-30   
 MC  LOOP  2     7.71     89   100.0    89      43-TSLTNCPGSPFDITKISH-60   
 MC  LOOP  3     4.31     25   100.0    25      93-ESTFN-97   
 MC  LOOP  4     5.01     14   100.0    14     127-GRT-129  
 MC  LOOP  5    28.52     35   100.0    35     153-TDPQTKV-159  
 MC  LOOP  6    23.06     14   100.0    14     171-QDG-173  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1    18.96    122   100.0   122      13-AVCSFQKSGSCPGSGLRT-30   
 ALL LOOP  2     8.15    133   100.0   133      43-TSLTNCPGSPFDITKISH-60   
 ALL LOOP  3     6.58     41   100.0    41      93-ESTFN-97   
 ALL LOOP  4     5.78     22   100.0    22     127-GRT-129  
 ALL LOOP  5    28.83     54   100.0    54     153-TDPQTKV-159  
 ALL LOOP  6    22.90     21   100.0    21     171-QDG-173  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     9.79     18   100.0    18      13-AVCSFQKSGSCPGSGLRT-30   
 CA  LOOP  2     4.17     18   100.0    18      43-TSLTNCPGSPFDITKISH-60   
 CA  LOOP  3     2.41      5   100.0     5      93-ESTFN-97   
 CA  LOOP  4     0.21      3   100.0     3     127-GRT-129  
 CA  LOOP  5     5.23      7   100.0     7     153-TDPQTKV-159  
 CA  LOOP  6     0.16      3   100.0     3     171-QDG-173  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     9.76     87   100.0    87      13-AVCSFQKSGSCPGSGLRT-30   
 MC  LOOP  2     4.33     89   100.0    89      43-TSLTNCPGSPFDITKISH-60   
 MC  LOOP  3     2.82     25   100.0    25      93-ESTFN-97   
 MC  LOOP  4     2.07     14   100.0    14     127-GRT-129  
 MC  LOOP  5     5.60     35   100.0    35     153-TDPQTKV-159  
 MC  LOOP  6     1.16     14   100.0    14     171-QDG-173  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     9.82    122   100.0   122      13-AVCSFQKSGSCPGSGLRT-30   
 ALL LOOP  2     5.29    133   100.0   133      43-TSLTNCPGSPFDITKISH-60   
 ALL LOOP  3     3.98     41   100.0    41      93-ESTFN-97   
 ALL LOOP  4     4.56     22   100.0    22     127-GRT-129  
 ALL LOOP  5     6.55     54   100.0    54     153-TDPQTKV-159  
 ALL LOOP  6     3.42     21   100.0    21     171-QDG-173  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    8.945      0.516       0.478    184    96.8   190     ERRCA  
     WELL ORDERED  . . . . .    9.056      0.522       0.485    181    96.8   187     ERRCA  
     NO INTER CONTACTS . . .    9.054      0.530       0.490    133    95.7   139     ERRCA  
     SHIFTED CHAIN . . . . .    8.617      0.479       0.449    146    96.1   152     ERRCA  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRCA  
     SECONDARY STRUCTURE . .    9.131      0.592       0.569     99    97.1   102     ERRCA  
     LARGE SHIFTS/INSERTIONS    8.275      0.353       0.306     58    96.7    60     ERRCA  
     SURFACE . . . . . . . .    8.346      0.456       0.423    101    97.1   104     ERRCA  
     BURIED  . . . . . . . .    9.673      0.588       0.544     83    96.5    86     ERRCA  
     CORE  . . . . . . . . .    9.253      0.590       0.556    126    96.9   130     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    8.991      0.516       0.476    906    96.9   935     ERRMC  
     WELL ORDERED  . . . . .    9.102      0.523       0.483    888    96.8   917     ERRMC  
     NO INTER CONTACTS . . .    9.094      0.528       0.484    654    95.8   683     ERRMC  
     SHIFTED CHAIN . . . . .    8.659      0.481       0.447    717    96.1   746     ERRMC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRMC  
     SECONDARY STRUCTURE . .    9.133      0.590       0.566    491    97.0   506     ERRMC  
     LARGE SHIFTS/INSERTIONS    8.380      0.357       0.309    283    96.6   293     ERRMC  
     SURFACE . . . . . . . .    8.413      0.459       0.424    498    97.3   512     ERRMC  
     BURIED  . . . . . . . .    9.695      0.586       0.539    408    96.5   423     ERRMC  
     CORE  . . . . . . . . .    9.268      0.588       0.552    623    97.0   642     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    9.078      0.487       0.440    712    96.9   735     ERRSC  
     WELL ORDERED  . . . . .    9.331      0.508       0.460    629    96.6   651     ERRSC  
     NO INTER CONTACTS . . .    9.484      0.522       0.476    526    95.8   549     ERRSC  
     RELIABLE SIDE CHAINS  .    9.094      0.482       0.432    604    96.6   625     ERRSC  
     CHANGED ANGLES  . . . .    8.187      0.379       0.331    355    96.5   368     ERRSC  
     SHIFTED CHAIN . . . . .    8.292      0.440       0.403    534    95.9   557     ERRSC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRSC  
     SECONDARY STRUCTURE . .    8.889      0.546       0.522    411    96.5   426     ERRSC  
     LARGE SHIFTS/INSERTIONS    7.571      0.302       0.234    191    97.4   196     ERRSC  
     SURFACE . . . . . . . .    8.562      0.410       0.360    363    98.6   368     ERRSC  
     BURIED  . . . . . . . .    9.615      0.567       0.523    349    95.1   367     ERRSC  
     CORE  . . . . . . . . .    9.631      0.554       0.515    521    96.7   539     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    9.021      0.502       0.460   1448    96.9  1495     ERRALL 
     WELL ORDERED  . . . . .    9.195      0.517       0.474   1352    96.7  1398     ERRALL 
     NO INTER CONTACTS . . .    9.257      0.525       0.480   1058    95.7  1105     ERRALL 
     SHIFTED CHAIN . . . . .    8.477      0.462       0.428   1118    96.0  1165     ERRALL 
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRALL 
     SECONDARY STRUCTURE . .    9.003      0.569       0.545    807    96.8   834     ERRALL 
     LARGE SHIFTS/INSERTIONS    8.019      0.335       0.279    423    97.0   436     ERRALL 
     SURFACE . . . . . . . .    8.462      0.436       0.396    767    97.8   784     ERRALL 
     BURIED  . . . . . . . .    9.650      0.577       0.532    681    95.8   711     ERRALL 
     CORE  . . . . . . . . .    9.434      0.572       0.534   1025    96.8  1059     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        43        64        70        95       116     184     190   DISTCA 
CA  (P)     22.63     33.68     36.84     50.00     61.05             190   DISTCA 
CA  (RMS)    0.64      0.92      1.15      2.36      3.73                   DISTCA 
 
ALL (N)       310       462       533       701       897    1448    1495   DISTALL 
ALL (P)     20.74     30.90     35.65     46.89     60.00            1495   DISTALL 
ALL (RMS)    0.64      0.97      1.28      2.28      3.92                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         130           126            58          RMSLSI 
CA  (P)       68.42         66.32         30.53          RMSLSI 
CA  (RMS)      1.44         13.33         16.26          RMSLSI 
 
 
 
END of the results output 
