 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0082.inter 
# 
NUMBER-OF-PARENTS      1 
ALIGNMENT-DALI(1)      ../PARENTS/casp3.T0082.1bol.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 1495 atoms, MODEL 1542 atoms, 1494 common with TARGET 
           Number of atoms possible to evaluate: 1483 
 
 
 CA-RMS TARGET<->PARENT(1bol)	 2.220320 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    67.65           61.2   376    99.5   378     ARMSMC  
     WELL ORDERED  . . . . .    65.97           62.3   369    99.5   371     ARMSMC  
     NO INTER CONTACTS . . .    68.74           59.9   274    99.3   276     ARMSMC  
     SHIFTED CHAIN . . . . .    70.74           57.0   300    99.3   302     ARMSMC  
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSMC  
     SECONDARY STRUCTURE . .    50.51           76.5   204   100.0   204     ARMSMC  
     LARGE SHIFTS/INSERTIONS    94.50           34.2   120   100.0   120     ARMSMC  
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSMC  
     SURFACE . . . . . . . .    75.07           56.0   207    99.5   208     ARMSMC  
     BURIED  . . . . . . . .    57.26           67.5   169    99.4   170     ARMSMC  
     CORE  . . . . . . . . .    50.35           73.8   256    99.2   258     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    76.62           44.7   161    99.4   162     ARMSSC1 
     WELL ORDERED  . . . . .    74.79           46.3   147    99.3   148     ARMSSC1 
     NO INTER CONTACTS . . .    73.77           48.3   118    99.2   119     ARMSSC1 
     RELIABLE SIDE CHAINS  .    76.72           43.1   153    99.4   154     ARMSSC1 
     CHANGED ANGLES  . . . .    83.72           31.5    92    98.9    93     ARMSSC1 
     SHIFTED CHAIN . . . . .    76.94           41.3   126    99.2   127     ARMSSC1 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SECONDARY STRUCTURE . .    76.32           47.2    89   100.0    89     ARMSSC1 
     LARGE SHIFTS/INSERTIONS    85.46           23.5    51   100.0    51     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .    84.72           33.0    88   100.0    88     ARMSSC1 
     BURIED  . . . . . . . .    65.55           58.9    73    98.6    74     ARMSSC1 
     CORE  . . . . . . . . .    72.16           54.5   110    99.1   111     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    70.61           43.0   114    99.1   115     ARMSSC2 
     WELL ORDERED  . . . . .    70.58           42.0   100    99.0   101     ARMSSC2 
     NO INTER CONTACTS . . .    67.03           44.7    85    98.8    86     ARMSSC2 
     RELIABLE SIDE CHAINS  .    64.13           46.5    86    98.9    87     ARMSSC2 
     CHANGED ANGLES  . . . .    74.87           32.9    79    98.8    80     ARMSSC2 
     SHIFTED CHAIN . . . . .    70.48           41.4    87    98.9    88     ARMSSC2 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SECONDARY STRUCTURE . .    70.92           49.3    67   100.0    67     ARMSSC2 
     LARGE SHIFTS/INSERTIONS    79.11           23.3    30   100.0    30     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .    69.74           33.9    59   100.0    59     ARMSSC2 
     BURIED  . . . . . . . .    71.53           52.7    55    98.2    56     ARMSSC2 
     CORE  . . . . . . . . .    67.32           50.0    84    98.8    85     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    92.72           22.2    36   100.0    36     ARMSSC3 
     WELL ORDERED  . . . . .    97.62           26.3    19   100.0    19     ARMSSC3 
     NO INTER CONTACTS . . .    90.98           27.3    22   100.0    22     ARMSSC3 
     RELIABLE SIDE CHAINS  .    91.52           22.7    22   100.0    22     ARMSSC3 
     CHANGED ANGLES  . . . .    91.23           21.2    33   100.0    33     ARMSSC3 
     SHIFTED CHAIN . . . . .    93.85           24.1    29   100.0    29     ARMSSC3 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SECONDARY STRUCTURE . .    95.89           20.8    24   100.0    24     ARMSSC3 
     LARGE SHIFTS/INSERTIONS    92.19           10.0    10   100.0    10     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .    90.16           19.2    26   100.0    26     ARMSSC3 
     BURIED  . . . . . . . .    99.05           30.0    10   100.0    10     ARMSSC3 
     CORE  . . . . . . . . .    92.92           26.9    26   100.0    26     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    67.43           26.3    19   100.0    19     ARMSSC4 
     WELL ORDERED  . . . . .    49.04           33.3     9   100.0     9     ARMSSC4 
     NO INTER CONTACTS . . .    69.74           27.3    11   100.0    11     ARMSSC4 
     RELIABLE SIDE CHAINS  .    67.43           26.3    19   100.0    19     ARMSSC4 
     CHANGED ANGLES  . . . .    65.78           27.8    18   100.0    18     ARMSSC4 
     SHIFTED CHAIN . . . . .    69.84           23.5    17   100.0    17     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SECONDARY STRUCTURE . .    54.30           33.3    12   100.0    12     ARMSSC4 
     LARGE SHIFTS/INSERTIONS    93.63            0.0     6   100.0     6     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .    69.56           25.0    16   100.0    16     ARMSSC4 
     BURIED  . . . . . . . .    54.69           33.3     3   100.0     3     ARMSSC4 
     CORE  . . . . . . . . .    50.97           38.5    13   100.0    13     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =   0.60065     r(1,2) =   0.72029     r(1,3) =  -0.34699 
 r(2,1) =  -0.40394     r(2,2) =  -0.10114     r(2,3) =  -0.90918 
 r(3,1) =  -0.68996     r(3,2) =   0.68626     r(3,3) =   0.23020 
THE OFFSET VECTOR: 
 v(1) =  21.99530     v(2) =  37.65250     v(3) =  26.95475 
 
 Number of iteration 44                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.48           (Number of atoms:   98) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    9.43        189    99.5   190     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0499                            CRMSCA  
     WELL ORDERED  . . . . .    9.41        186    99.5   187     CRMSCA  
     NO INTER CONTACTS . . .   10.02        138    99.3   139     CRMSCA  
     SHIFTED CHAIN . . . . .    8.25        151    99.3   152     CRMSCA  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSCA  
     SECONDARY STRUCTURE . .   10.39        102   100.0   102     CRMSCA  
     SHIFTED SS UNITS  . . .    2.52         54   100.0    54     CRMSCA  
     LARGE SHIFTS/INSERTIONS   10.49         60   100.0    60     CRMSCA  
     SURFACE . . . . . . . .    7.58        104   100.0   104     CRMSCA  
     BURIED  . . . . . . . .   11.29         85    98.8    86     CRMSCA  
     CORE  . . . . . . . . .    8.90        129    99.2   130     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    9.51        929    99.4   935     CRMSMC  
     WELL ORDERED  . . . . .    9.52        911    99.3   917     CRMSMC  
     NO INTER CONTACTS . . .   10.13        677    99.1   683     CRMSMC  
     SHIFTED CHAIN . . . . .    8.30        740    99.2   746     CRMSMC  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSMC  
     SECONDARY STRUCTURE . .   10.47        506   100.0   506     CRMSMC  
     SHIFTED SS UNITS  . . .    2.56        267   100.0   267     CRMSMC  
     LARGE SHIFTS/INSERTIONS   10.52        293   100.0   293     CRMSMC  
     SURFACE . . . . . . . .    7.61        512   100.0   512     CRMSMC  
     BURIED  . . . . . . . .   11.42        417    98.6   423     CRMSMC  
     CORE  . . . . . . . . .    9.01        636    99.1   642     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   10.69        728    99.0   735     CRMSSC  
     WELL ORDERED  . . . . .   10.80        644    98.9   651     CRMSSC  
     NO INTER CONTACTS . . .   11.44        542    98.7   549     CRMSSC  
     RELIABLE SIDE CHAINS  .   10.65        618    98.9   625     CRMSSC  
     CHANGED ANGLES  . . . .   10.78        362    98.4   368     CRMSSC  
     SECONDARY STRUCTURE . .   10.79        426   100.0   426     CRMSSC  
     LARGE SHIFTS/INSERTIONS   11.50        196   100.0   196     CRMSSC  
     SURFACE . . . . . . . .    8.84        368   100.0   368     CRMSSC  
     BURIED  . . . . . . . .   12.30        360    98.1   367     CRMSSC  
     CORE  . . . . . . . . .   10.38        532    98.7   539     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   10.05       1483    99.2  1495     CRMSALL 
     WELL ORDERED  . . . . .   10.07       1386    99.1  1398     CRMSALL 
     NO INTER CONTACTS . . .   10.73       1093    98.9  1105     CRMSALL 
     SHIFTED CHAIN . . . . .    8.47       1153    99.0  1165     CRMSALL 
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSALL 
     SECONDARY STRUCTURE . .   10.59        834   100.0   834     CRMSALL 
     LARGE SHIFTS/INSERTIONS   10.89        436   100.0   436     CRMSALL 
     SURFACE . . . . . . . .    8.15        784   100.0   784     CRMSALL 
     BURIED  . . . . . . . .   11.82        699    98.3   711     CRMSALL 
     CORE  . . . . . . . . .    9.68       1047    98.9  1059     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1    14.11     18   100.0    18      13-AVCSFQKSGSCPGSGLRT-30   
 CA  LOOP  2     8.50     18   100.0    18      43-TSLTNCPGSPFDITKISH-60   
 CA  LOOP  3     4.15      5   100.0     5      93-ESTFN-97   
 CA  LOOP  4     3.06      3   100.0     3     127-GRT-129  
 CA  LOOP  5    14.08      7   100.0     7     153-TDPQTKV-159  
 CA  LOOP  6     7.71      3   100.0     3     171-QDG-173  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1    14.11     87   100.0    87      13-AVCSFQKSGSCPGSGLRT-30   
 MC  LOOP  2     8.50     89   100.0    89      43-TSLTNCPGSPFDITKISH-60   
 MC  LOOP  3     4.36     25   100.0    25      93-ESTFN-97   
 MC  LOOP  4     2.91     14   100.0    14     127-GRT-129  
 MC  LOOP  5    14.27     35   100.0    35     153-TDPQTKV-159  
 MC  LOOP  6     7.38     14   100.0    14     171-QDG-173  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1    14.11    122   100.0   122      13-AVCSFQKSGSCPGSGLRT-30   
 ALL LOOP  2     9.08    133   100.0   133      43-TSLTNCPGSPFDITKISH-60   
 ALL LOOP  3     5.31     41   100.0    41      93-ESTFN-97   
 ALL LOOP  4     5.87     22   100.0    22     127-GRT-129  
 ALL LOOP  5    14.89     54   100.0    54     153-TDPQTKV-159  
 ALL LOOP  6     9.26     21   100.0    21     171-QDG-173  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     7.17     18   100.0    18      13-AVCSFQKSGSCPGSGLRT-30   
 CA  LOOP  2     3.32     18   100.0    18      43-TSLTNCPGSPFDITKISH-60   
 CA  LOOP  3     1.37      5   100.0     5      93-ESTFN-97   
 CA  LOOP  4     0.78      3   100.0     3     127-GRT-129  
 CA  LOOP  5     4.19      7   100.0     7     153-TDPQTKV-159  
 CA  LOOP  6     0.52      3   100.0     3     171-QDG-173  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     7.25     87   100.0    87      13-AVCSFQKSGSCPGSGLRT-30   
 MC  LOOP  2     3.49     89   100.0    89      43-TSLTNCPGSPFDITKISH-60   
 MC  LOOP  3     1.58     25   100.0    25      93-ESTFN-97   
 MC  LOOP  4     2.05     14   100.0    14     127-GRT-129  
 MC  LOOP  5     4.70     35   100.0    35     153-TDPQTKV-159  
 MC  LOOP  6     1.37     14   100.0    14     171-QDG-173  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     7.48    122   100.0   122      13-AVCSFQKSGSCPGSGLRT-30   
 ALL LOOP  2     4.54    133   100.0   133      43-TSLTNCPGSPFDITKISH-60   
 ALL LOOP  3     3.23     41   100.0    41      93-ESTFN-97   
 ALL LOOP  4     2.70     22   100.0    22     127-GRT-129  
 ALL LOOP  5     6.18     54   100.0    54     153-TDPQTKV-159  
 ALL LOOP  6     2.97     21   100.0    21     171-QDG-173  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.185      0.468       0.241    189    99.5   190     ERRCA  
     WELL ORDERED  . . . . .    5.111      0.462       0.239    186    99.5   187     ERRCA  
     NO INTER CONTACTS . . .    5.502      0.459       0.239    138    99.3   139     ERRCA  
     SHIFTED CHAIN . . . . .    4.567      0.473       0.243    151    99.3   152     ERRCA  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRCA  
     SECONDARY STRUCTURE . .    5.379      0.421       0.217    102   100.0   102     ERRCA  
     LARGE SHIFTS/INSERTIONS    7.665      0.696       0.348     60   100.0    60     ERRCA  
     SURFACE . . . . . . . .    4.469      0.490       0.248    104   100.0   104     ERRCA  
     BURIED  . . . . . . . .    6.060      0.440       0.233     85    98.8    86     ERRCA  
     CORE  . . . . . . . . .    4.031      0.362       0.192    129    99.2   130     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.271      0.479       0.249    929    99.4   935     ERRMC  
     WELL ORDERED  . . . . .    5.225      0.474       0.246    911    99.3   917     ERRMC  
     NO INTER CONTACTS . . .    5.626      0.473       0.248    677    99.1   683     ERRMC  
     SHIFTED CHAIN . . . . .    4.637      0.484       0.251    740    99.2   746     ERRMC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRMC  
     SECONDARY STRUCTURE . .    5.467      0.432       0.224    506   100.0   506     ERRMC  
     LARGE SHIFTS/INSERTIONS    7.693      0.700       0.350    293   100.0   293     ERRMC  
     SURFACE . . . . . . . .    4.526      0.505       0.259    512   100.0   512     ERRMC  
     BURIED  . . . . . . . .    6.186      0.448       0.236    417    98.6   423     ERRMC  
     CORE  . . . . . . . . .    4.155      0.377       0.202    636    99.1   642     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    6.418      0.556       0.280    728    99.0   735     ERRSC  
     WELL ORDERED  . . . . .    6.288      0.536       0.270    644    98.9   651     ERRSC  
     NO INTER CONTACTS . . .    6.893      0.556       0.281    542    98.7   549     ERRSC  
     RELIABLE SIDE CHAINS  .    6.314      0.546       0.276    618    98.9   625     ERRSC  
     CHANGED ANGLES  . . . .    7.079      0.618       0.309    362    98.4   368     ERRSC  
     SHIFTED CHAIN . . . . .    5.385      0.557       0.281    550    98.7   557     ERRSC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRSC  
     SECONDARY STRUCTURE . .    5.989      0.504       0.255    426   100.0   426     ERRSC  
     LARGE SHIFTS/INSERTIONS    9.038      0.750       0.375    196   100.0   196     ERRSC  
     SURFACE . . . . . . . .    5.877      0.598       0.300    368   100.0   368     ERRSC  
     BURIED  . . . . . . . .    6.971      0.512       0.259    360    98.1   367     ERRSC  
     CORE  . . . . . . . . .    5.453      0.484       0.245    532    98.7   539     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.779      0.514       0.263   1483    99.2  1495     ERRALL 
     WELL ORDERED  . . . . .    5.657      0.499       0.256   1386    99.1  1398     ERRALL 
     NO INTER CONTACTS . . .    6.190      0.510       0.262   1093    98.9  1105     ERRALL 
     SHIFTED CHAIN . . . . .    4.941      0.515       0.264   1153    99.0  1165     ERRALL 
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRALL 
     SECONDARY STRUCTURE . .    5.689      0.466       0.239    834   100.0   834     ERRALL 
     LARGE SHIFTS/INSERTIONS    8.195      0.719       0.359    436   100.0   436     ERRALL 
     SURFACE . . . . . . . .    5.100      0.545       0.277    784   100.0   784     ERRALL 
     BURIED  . . . . . . . .    6.541      0.479       0.247    699    98.3   711     ERRALL 
     CORE  . . . . . . . . .    4.774      0.428       0.223   1047    98.9  1059     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        22        86       105       125       146     189     190   DISTCA 
CA  (P)     11.58     45.26     55.26     65.79     76.84             190   DISTCA 
CA  (RMS)    0.76      1.36      1.58      2.08      3.29                   DISTCA 
 
ALL (N)       127       535       733       941      1117    1483    1495   DISTALL 
ALL (P)      8.49     35.79     49.03     62.94     74.72            1495   DISTALL 
ALL (RMS)    0.78      1.41      1.75      2.41      3.59                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         130           129            60          RMSLSI 
CA  (P)       68.42         67.89         31.58          RMSLSI 
CA  (RMS)      1.44          8.90         10.49          RMSLSI 
 
 
 
END of the results output 
