 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0082.inter 
# 
NUMBER-OF-PARENTS      1 
ALIGNMENT-DALI(1)      ../PARENTS/casp3.T0082.1bol.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 1495 atoms, MODEL 1496 atoms, 1495 common with TARGET 
           Number of atoms possible to evaluate: 1495 
 
 
 CA-RMS TARGET<->PARENT(1bol)	 2.220320 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    61.40           66.7   378   100.0   378     ARMSMC  
     WELL ORDERED  . . . . .    59.85           67.9   371   100.0   371     ARMSMC  
     NO INTER CONTACTS . . .    59.98           66.3   276   100.0   276     ARMSMC  
     SHIFTED CHAIN . . . . .    65.45           62.6   302   100.0   302     ARMSMC  
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSMC  
     SECONDARY STRUCTURE . .    36.76           82.8   204   100.0   204     ARMSMC  
     LARGE SHIFTS/INSERTIONS    89.51           43.3   120   100.0   120     ARMSMC  
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSMC  
     SURFACE . . . . . . . .    67.79           60.1   208   100.0   208     ARMSMC  
     BURIED  . . . . . . . .    52.53           74.7   170   100.0   170     ARMSMC  
     CORE  . . . . . . . . .    42.38           77.5   258   100.0   258     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    80.52           48.1   162   100.0   162     ARMSSC1 
     WELL ORDERED  . . . . .    77.16           50.7   148   100.0   148     ARMSSC1 
     NO INTER CONTACTS . . .    75.35           53.8   119   100.0   119     ARMSSC1 
     RELIABLE SIDE CHAINS  .    79.97           48.1   154   100.0   154     ARMSSC1 
     CHANGED ANGLES  . . . .    90.99           35.5    93   100.0    93     ARMSSC1 
     SHIFTED CHAIN . . . . .    82.27           46.5   127   100.0   127     ARMSSC1 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SECONDARY STRUCTURE . .    79.11           49.4    89   100.0    89     ARMSSC1 
     LARGE SHIFTS/INSERTIONS    89.58           41.2    51   100.0    51     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .    88.47           36.4    88   100.0    88     ARMSSC1 
     BURIED  . . . . . . . .    69.90           62.2    74   100.0    74     ARMSSC1 
     CORE  . . . . . . . . .    75.99           51.4   111   100.0   111     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    75.05           46.1   115   100.0   115     ARMSSC2 
     WELL ORDERED  . . . . .    74.89           46.5   101   100.0   101     ARMSSC2 
     NO INTER CONTACTS . . .    72.54           51.2    86   100.0    86     ARMSSC2 
     RELIABLE SIDE CHAINS  .    68.31           48.3    87   100.0    87     ARMSSC2 
     CHANGED ANGLES  . . . .    75.93           38.8    80   100.0    80     ARMSSC2 
     SHIFTED CHAIN . . . . .    77.96           40.9    88   100.0    88     ARMSSC2 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SECONDARY STRUCTURE . .    78.88           46.3    67   100.0    67     ARMSSC2 
     LARGE SHIFTS/INSERTIONS    81.92           36.7    30   100.0    30     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .    78.58           37.3    59   100.0    59     ARMSSC2 
     BURIED  . . . . . . . .    71.15           55.4    56   100.0    56     ARMSSC2 
     CORE  . . . . . . . . .    72.48           49.4    85   100.0    85     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    76.79           36.1    36   100.0    36     ARMSSC3 
     WELL ORDERED  . . . . .    60.02           47.4    19   100.0    19     ARMSSC3 
     NO INTER CONTACTS . . .    77.82           40.9    22   100.0    22     ARMSSC3 
     RELIABLE SIDE CHAINS  .    74.62           45.5    22   100.0    22     ARMSSC3 
     CHANGED ANGLES  . . . .    74.22           39.4    33   100.0    33     ARMSSC3 
     SHIFTED CHAIN . . . . .    82.20           27.6    29   100.0    29     ARMSSC3 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SECONDARY STRUCTURE . .    68.76           41.7    24   100.0    24     ARMSSC3 
     LARGE SHIFTS/INSERTIONS    98.84           20.0    10   100.0    10     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .    84.99           34.6    26   100.0    26     ARMSSC3 
     BURIED  . . . . . . . .    49.47           40.0    10   100.0    10     ARMSSC3 
     CORE  . . . . . . . . .    66.38           42.3    26   100.0    26     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    86.98           31.6    19   100.0    19     ARMSSC4 
     WELL ORDERED  . . . . .    91.24           22.2     9   100.0     9     ARMSSC4 
     NO INTER CONTACTS . . .    88.56           36.4    11   100.0    11     ARMSSC4 
     RELIABLE SIDE CHAINS  .    86.98           31.6    19   100.0    19     ARMSSC4 
     CHANGED ANGLES  . . . .    87.42           33.3    18   100.0    18     ARMSSC4 
     SHIFTED CHAIN . . . . .    88.95           35.3    17   100.0    17     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SECONDARY STRUCTURE . .    97.08            8.3    12   100.0    12     ARMSSC4 
     LARGE SHIFTS/INSERTIONS    67.02           83.3     6   100.0     6     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .    75.43           37.5    16   100.0    16     ARMSSC4 
     BURIED  . . . . . . . .   132.57            0.0     3   100.0     3     ARMSSC4 
     CORE  . . . . . . . . .    94.79            7.7    13   100.0    13     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =   0.68489     r(1,2) =  -0.09364     r(1,3) =   0.72261 
 r(2,1) =  -0.61448     r(2,2) =  -0.60719     r(2,3) =   0.50372 
 r(3,1) =   0.39160     r(3,2) =  -0.78902     r(3,3) =  -0.47340 
THE OFFSET VECTOR: 
 v(1) =  -1.71568     v(2) =  75.11716     v(3) =  36.37437 
 
 Number of iteration 35                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.22           (Number of atoms:  129) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    4.91        190   100.0   190     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0258                            CRMSCA  
     WELL ORDERED  . . . . .    4.87        187   100.0   187     CRMSCA  
     NO INTER CONTACTS . . .    3.78        139   100.0   139     CRMSCA  
     SHIFTED CHAIN . . . . .    5.46        152   100.0   152     CRMSCA  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSCA  
     SECONDARY STRUCTURE . .    2.40        102   100.0   102     CRMSCA  
     SHIFTED SS UNITS  . . .    1.52         54   100.0    54     CRMSCA  
     LARGE SHIFTS/INSERTIONS    8.27         60   100.0    60     CRMSCA  
     SURFACE . . . . . . . .    5.79        104   100.0   104     CRMSCA  
     BURIED  . . . . . . . .    3.56         86   100.0    86     CRMSCA  
     CORE  . . . . . . . . .    1.90        130   100.0   130     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    4.93        935   100.0   935     CRMSMC  
     WELL ORDERED  . . . . .    4.91        917   100.0   917     CRMSMC  
     NO INTER CONTACTS . . .    3.84        683   100.0   683     CRMSMC  
     SHIFTED CHAIN . . . . .    5.48        746   100.0   746     CRMSMC  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSMC  
     SECONDARY STRUCTURE . .    2.54        506   100.0   506     CRMSMC  
     SHIFTED SS UNITS  . . .    1.59        267   100.0   267     CRMSMC  
     LARGE SHIFTS/INSERTIONS    8.29        293   100.0   293     CRMSMC  
     SURFACE . . . . . . . .    5.78        512   100.0   512     CRMSMC  
     BURIED  . . . . . . . .    3.64        423   100.0   423     CRMSMC  
     CORE  . . . . . . . . .    2.00        642   100.0   642     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    5.79        735   100.0   735     CRMSSC  
     WELL ORDERED  . . . . .    5.50        651   100.0   651     CRMSSC  
     NO INTER CONTACTS . . .    4.41        549   100.0   549     CRMSSC  
     RELIABLE SIDE CHAINS  .    5.79        625   100.0   625     CRMSSC  
     CHANGED ANGLES  . . . .    7.09        368   100.0   368     CRMSSC  
     SECONDARY STRUCTURE . .    3.19        426   100.0   426     CRMSSC  
     LARGE SHIFTS/INSERTIONS    9.99        196   100.0   196     CRMSSC  
     SURFACE . . . . . . . .    6.89        368   100.0   368     CRMSSC  
     BURIED  . . . . . . . .    4.42        367   100.0   367     CRMSSC  
     CORE  . . . . . . . . .    3.07        539   100.0   539     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    5.33       1495   100.0  1495     CRMSALL 
     WELL ORDERED  . . . . .    5.15       1398   100.0  1398     CRMSALL 
     NO INTER CONTACTS . . .    4.09       1105   100.0  1105     CRMSALL 
     SHIFTED CHAIN . . . . .    5.96       1165   100.0  1165     CRMSALL 
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSALL 
     SECONDARY STRUCTURE . .    2.88        834   100.0   834     CRMSALL 
     LARGE SHIFTS/INSERTIONS    9.02        436   100.0   436     CRMSALL 
     SURFACE . . . . . . . .    6.28        784   100.0   784     CRMSALL 
     BURIED  . . . . . . . .    4.03        711   100.0   711     CRMSALL 
     CORE  . . . . . . . . .    2.57       1059   100.0  1059     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1    13.25     18   100.0    18      13-AVCSFQKSGSCPGSGLRT-30   
 CA  LOOP  2     4.34     18   100.0    18      43-TSLTNCPGSPFDITKISH-60   
 CA  LOOP  3     4.25      5   100.0     5      93-ESTFN-97   
 CA  LOOP  4     3.44      3   100.0     3     127-GRT-129  
 CA  LOOP  5     7.40      7   100.0     7     153-TDPQTKV-159  
 CA  LOOP  6     4.67      3   100.0     3     171-QDG-173  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1    13.30     87   100.0    87      13-AVCSFQKSGSCPGSGLRT-30   
 MC  LOOP  2     4.47     89   100.0    89      43-TSLTNCPGSPFDITKISH-60   
 MC  LOOP  3     4.40     25   100.0    25      93-ESTFN-97   
 MC  LOOP  4     2.87     14   100.0    14     127-GRT-129  
 MC  LOOP  5     7.44     35   100.0    35     153-TDPQTKV-159  
 MC  LOOP  6     4.55     14   100.0    14     171-QDG-173  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1    14.26    122   100.0   122      13-AVCSFQKSGSCPGSGLRT-30   
 ALL LOOP  2     5.37    133   100.0   133      43-TSLTNCPGSPFDITKISH-60   
 ALL LOOP  3     6.91     41   100.0    41      93-ESTFN-97   
 ALL LOOP  4     2.51     22   100.0    22     127-GRT-129  
 ALL LOOP  5     8.60     54   100.0    54     153-TDPQTKV-159  
 ALL LOOP  6     4.60     21   100.0    21     171-QDG-173  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     3.60     18   100.0    18      13-AVCSFQKSGSCPGSGLRT-30   
 CA  LOOP  2     3.15     18   100.0    18      43-TSLTNCPGSPFDITKISH-60   
 CA  LOOP  3     2.48      5   100.0     5      93-ESTFN-97   
 CA  LOOP  4     0.16      3   100.0     3     127-GRT-129  
 CA  LOOP  5     2.88      7   100.0     7     153-TDPQTKV-159  
 CA  LOOP  6     0.14      3   100.0     3     171-QDG-173  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     3.81     87   100.0    87      13-AVCSFQKSGSCPGSGLRT-30   
 MC  LOOP  2     3.32     89   100.0    89      43-TSLTNCPGSPFDITKISH-60   
 MC  LOOP  3     2.81     25   100.0    25      93-ESTFN-97   
 MC  LOOP  4     1.18     14   100.0    14     127-GRT-129  
 MC  LOOP  5     3.12     35   100.0    35     153-TDPQTKV-159  
 MC  LOOP  6     1.50     14   100.0    14     171-QDG-173  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     4.61    122   100.0   122      13-AVCSFQKSGSCPGSGLRT-30   
 ALL LOOP  2     4.32    133   100.0   133      43-TSLTNCPGSPFDITKISH-60   
 ALL LOOP  3     4.97     41   100.0    41      93-ESTFN-97   
 ALL LOOP  4     2.44     22   100.0    22     127-GRT-129  
 ALL LOOP  5     4.90     54   100.0    54     153-TDPQTKV-159  
 ALL LOOP  6     3.36     21   100.0    21     171-QDG-173  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    2.574      0.554       0.285    190   100.0   190     ERRCA  
     WELL ORDERED  . . . . .    2.516      0.549       0.283    187   100.0   187     ERRCA  
     NO INTER CONTACTS . . .    1.920      0.511       0.265    139   100.0   139     ERRCA  
     SHIFTED CHAIN . . . . .    3.120      0.625       0.315    152   100.0   152     ERRCA  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRCA  
     SECONDARY STRUCTURE . .    1.082      0.432       0.231    102   100.0   102     ERRCA  
     LARGE SHIFTS/INSERTIONS    5.967      0.778       0.389     60   100.0    60     ERRCA  
     SURFACE . . . . . . . .    3.399      0.636       0.321    104   100.0   104     ERRCA  
     BURIED  . . . . . . . .    1.577      0.456       0.242     86   100.0    86     ERRCA  
     CORE  . . . . . . . . .    1.008      0.451       0.238    130   100.0   130     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    2.615      0.561       0.286    935   100.0   935     ERRMC  
     WELL ORDERED  . . . . .    2.577      0.556       0.284    917   100.0   917     ERRMC  
     NO INTER CONTACTS . . .    1.993      0.523       0.269    683   100.0   683     ERRMC  
     SHIFTED CHAIN . . . . .    3.158      0.631       0.316    746   100.0   746     ERRMC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRMC  
     SECONDARY STRUCTURE . .    1.165      0.440       0.230    506   100.0   506     ERRMC  
     LARGE SHIFTS/INSERTIONS    5.977      0.781       0.392    293   100.0   293     ERRMC  
     SURFACE . . . . . . . .    3.411      0.639       0.320    512   100.0   512     ERRMC  
     BURIED  . . . . . . . .    1.651      0.468       0.245    423   100.0   423     ERRMC  
     CORE  . . . . . . . . .    1.080      0.461       0.238    642   100.0   642     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    3.452      0.644       0.323    735   100.0   735     ERRSC  
     WELL ORDERED  . . . . .    3.208      0.632       0.317    651   100.0   651     ERRSC  
     NO INTER CONTACTS . . .    2.590      0.608       0.305    549   100.0   549     ERRSC  
     RELIABLE SIDE CHAINS  .    3.382      0.633       0.317    625   100.0   625     ERRSC  
     CHANGED ANGLES  . . . .    4.732      0.714       0.357    368   100.0   368     ERRSC  
     SHIFTED CHAIN . . . . .    4.157      0.694       0.347    557   100.0   557     ERRSC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRSC  
     SECONDARY STRUCTURE . .    1.994      0.596       0.299    426   100.0   426     ERRSC  
     LARGE SHIFTS/INSERTIONS    7.607      0.807       0.404    196   100.0   196     ERRSC  
     SURFACE . . . . . . . .    4.529      0.710       0.355    368   100.0   368     ERRSC  
     BURIED  . . . . . . . .    2.373      0.579       0.290    367   100.0   367     ERRSC  
     CORE  . . . . . . . . .    1.941      0.585       0.293    539   100.0   539     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    2.995      0.600       0.304   1495   100.0  1495     ERRALL 
     WELL ORDERED  . . . . .    2.835      0.589       0.299   1398   100.0  1398     ERRALL 
     NO INTER CONTACTS . . .    2.265      0.564       0.287   1105   100.0  1105     ERRALL 
     SHIFTED CHAIN . . . . .    3.597      0.659       0.330   1165   100.0  1165     ERRALL 
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRALL 
     SECONDARY STRUCTURE . .    1.568      0.515       0.264    834   100.0   834     ERRALL 
     LARGE SHIFTS/INSERTIONS    6.632      0.791       0.396    436   100.0   436     ERRALL 
     SURFACE . . . . . . . .    3.897      0.669       0.335    784   100.0   784     ERRALL 
     BURIED  . . . . . . . .    2.000      0.523       0.269    711   100.0   711     ERRALL 
     CORE  . . . . . . . . .    1.498      0.521       0.266   1059   100.0  1059     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        55       119       134       156       180     190     190   DISTCA 
CA  (P)     28.95     62.63     70.53     82.11     94.74             190   DISTCA 
CA  (RMS)    0.64      1.10      1.31      1.90      3.14                   DISTCA 
 
ALL (N)       338       808       974      1180      1397    1495    1495   DISTALL 
ALL (P)     22.61     54.05     65.15     78.93     93.44            1495   DISTALL 
ALL (RMS)    0.67      1.17      1.48      2.13      3.41                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         130           130            60          RMSLSI 
CA  (P)       68.42         68.42         31.58          RMSLSI 
CA  (RMS)      1.44          1.90          8.27          RMSLSI 
 
 
 
END of the results output 
