 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0082.inter 
# 
NUMBER-OF-PARENTS      1 
ALIGNMENT-DALI(1)      ../PARENTS/casp3.T0082.1bol.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
           TARGET 1495 atoms, MODEL 1495 atoms, 1495 common with TARGET 
           Number of atoms possible to evaluate: 1495 
 
 
 CA-RMS TARGET<->PARENT(1bol)	 2.220320 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    81.94           41.5   378   100.0   378     ARMSMC  
     WELL ORDERED  . . . . .    81.54           42.0   371   100.0   371     ARMSMC  
     NO INTER CONTACTS . . .    81.95           40.9   276   100.0   276     ARMSMC  
     SHIFTED CHAIN . . . . .    84.22           40.4   302   100.0   302     ARMSMC  
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSMC  
     SECONDARY STRUCTURE . .    77.92           47.5   204   100.0   204     ARMSMC  
     LARGE SHIFTS/INSERTIONS    88.93           35.0   120   100.0   120     ARMSMC  
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSMC  
     SURFACE . . . . . . . .    84.63           43.8   208   100.0   208     ARMSMC  
     BURIED  . . . . . . . .    78.51           38.8   170   100.0   170     ARMSMC  
     CORE  . . . . . . . . .    78.47           44.6   258   100.0   258     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    76.93           49.4   162   100.0   162     ARMSSC1 
     WELL ORDERED  . . . . .    75.62           50.7   148   100.0   148     ARMSSC1 
     NO INTER CONTACTS . . .    73.45           52.9   119   100.0   119     ARMSSC1 
     RELIABLE SIDE CHAINS  .    77.04           49.4   154   100.0   154     ARMSSC1 
     CHANGED ANGLES  . . . .    72.98           50.5    93   100.0    93     ARMSSC1 
     SHIFTED CHAIN . . . . .    78.07           49.6   127   100.0   127     ARMSSC1 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SECONDARY STRUCTURE . .    78.38           49.4    89   100.0    89     ARMSSC1 
     LARGE SHIFTS/INSERTIONS    80.38           43.1    51   100.0    51     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .    82.31           44.3    88   100.0    88     ARMSSC1 
     BURIED  . . . . . . . .    69.98           55.4    74   100.0    74     ARMSSC1 
     CORE  . . . . . . . . .    75.29           52.3   111   100.0   111     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    70.63           43.5   115   100.0   115     ARMSSC2 
     WELL ORDERED  . . . . .    69.18           42.6   101   100.0   101     ARMSSC2 
     NO INTER CONTACTS . . .    67.72           45.3    86   100.0    86     ARMSSC2 
     RELIABLE SIDE CHAINS  .    64.90           44.8    87   100.0    87     ARMSSC2 
     CHANGED ANGLES  . . . .    63.45           50.0    80   100.0    80     ARMSSC2 
     SHIFTED CHAIN . . . . .    72.13           44.3    88   100.0    88     ARMSSC2 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SECONDARY STRUCTURE . .    69.83           47.8    67   100.0    67     ARMSSC2 
     LARGE SHIFTS/INSERTIONS    82.01           46.7    30   100.0    30     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .    74.90           39.0    59   100.0    59     ARMSSC2 
     BURIED  . . . . . . . .    65.83           48.2    56   100.0    56     ARMSSC2 
     CORE  . . . . . . . . .    66.14           42.4    85   100.0    85     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    83.03           30.6    36   100.0    36     ARMSSC3 
     WELL ORDERED  . . . . .    83.80           21.1    19   100.0    19     ARMSSC3 
     NO INTER CONTACTS . . .    82.21           27.3    22   100.0    22     ARMSSC3 
     RELIABLE SIDE CHAINS  .    82.54           45.5    22   100.0    22     ARMSSC3 
     CHANGED ANGLES  . . . .    83.25           27.3    33   100.0    33     ARMSSC3 
     SHIFTED CHAIN . . . . .    80.68           34.5    29   100.0    29     ARMSSC3 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SECONDARY STRUCTURE . .    85.38           25.0    24   100.0    24     ARMSSC3 
     LARGE SHIFTS/INSERTIONS    75.52           40.0    10   100.0    10     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .    83.27           38.5    26   100.0    26     ARMSSC3 
     BURIED  . . . . . . . .    82.40           10.0    10   100.0    10     ARMSSC3 
     CORE  . . . . . . . . .    85.74           26.9    26   100.0    26     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .   101.09           21.1    19   100.0    19     ARMSSC4 
     WELL ORDERED  . . . . .    90.57           11.1     9   100.0     9     ARMSSC4 
     NO INTER CONTACTS . . .    99.20           27.3    11   100.0    11     ARMSSC4 
     RELIABLE SIDE CHAINS  .   101.09           21.1    19   100.0    19     ARMSSC4 
     CHANGED ANGLES  . . . .   103.47           22.2    18   100.0    18     ARMSSC4 
     SHIFTED CHAIN . . . . .   106.39           17.6    17   100.0    17     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SECONDARY STRUCTURE . .   103.02            8.3    12   100.0    12     ARMSSC4 
     LARGE SHIFTS/INSERTIONS   104.78           33.3     6   100.0     6     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .    94.24           25.0    16   100.0    16     ARMSSC4 
     BURIED  . . . . . . . .   131.76            0.0     3   100.0     3     ARMSSC4 
     CORE  . . . . . . . . .    99.35           15.4    13   100.0    13     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =   0.83692     r(1,2) =   0.47339     r(1,3) =   0.27471 
 r(2,1) =  -0.00423     r(2,2) =   0.50749     r(2,3) =  -0.86165 
 r(3,1) =  -0.54731     r(3,2) =   0.71997     r(3,3) =   0.42673 
THE OFFSET VECTOR: 
 v(1) = -21.17157     v(2) =  20.33901     v(3) =  17.35962 
 
 Number of iteration 29                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.49           (Number of atoms:    6) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   21.70        190   100.0   190     CRMSCA  
     CRN = ALL/NP  . . . . .    0.1142                            CRMSCA  
     WELL ORDERED  . . . . .   21.77        187   100.0   187     CRMSCA  
     NO INTER CONTACTS . . .   22.12        139   100.0   139     CRMSCA  
     SHIFTED CHAIN . . . . .   22.96        152   100.0   152     CRMSCA  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSCA  
     SECONDARY STRUCTURE . .   21.30        102   100.0   102     CRMSCA  
     SHIFTED SS UNITS  . . .   24.35         54   100.0    54     CRMSCA  
     LARGE SHIFTS/INSERTIONS   21.64         60   100.0    60     CRMSCA  
     SURFACE . . . . . . . .   23.15        104   100.0   104     CRMSCA  
     BURIED  . . . . . . . .   19.79         86   100.0    86     CRMSCA  
     CORE  . . . . . . . . .   21.72        130   100.0   130     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   21.74        935   100.0   935     CRMSMC  
     WELL ORDERED  . . . . .   21.80        917   100.0   917     CRMSMC  
     NO INTER CONTACTS . . .   22.16        683   100.0   683     CRMSMC  
     SHIFTED CHAIN . . . . .   23.00        746   100.0   746     CRMSMC  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSMC  
     SECONDARY STRUCTURE . .   21.29        506   100.0   506     CRMSMC  
     SHIFTED SS UNITS  . . .   24.30        267   100.0   267     CRMSMC  
     LARGE SHIFTS/INSERTIONS   21.70        293   100.0   293     CRMSMC  
     SURFACE . . . . . . . .   23.25        512   100.0   512     CRMSMC  
     BURIED  . . . . . . . .   19.75        423   100.0   423     CRMSMC  
     CORE  . . . . . . . . .   21.76        642   100.0   642     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   22.72        735   100.0   735     CRMSSC  
     WELL ORDERED  . . . . .   22.18        651   100.0   651     CRMSSC  
     NO INTER CONTACTS . . .   22.63        549   100.0   549     CRMSSC  
     RELIABLE SIDE CHAINS  .   22.78        625   100.0   625     CRMSSC  
     CHANGED ANGLES  . . . .   24.74        368   100.0   368     CRMSSC  
     SECONDARY STRUCTURE . .   22.35        426   100.0   426     CRMSSC  
     LARGE SHIFTS/INSERTIONS   23.50        196   100.0   196     CRMSSC  
     SURFACE . . . . . . . .   25.41        368   100.0   368     CRMSSC  
     BURIED  . . . . . . . .   19.66        367   100.0   367     CRMSSC  
     CORE  . . . . . . . . .   22.43        539   100.0   539     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   22.18       1495   100.0  1495     CRMSALL 
     WELL ORDERED  . . . . .   21.93       1398   100.0  1398     CRMSALL 
     NO INTER CONTACTS . . .   22.36       1105   100.0  1105     CRMSALL 
     SHIFTED CHAIN . . . . .   23.53       1165   100.0  1165     CRMSALL 
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSALL 
     SECONDARY STRUCTURE . .   21.83        834   100.0   834     CRMSALL 
     LARGE SHIFTS/INSERTIONS   22.41        436   100.0   436     CRMSALL 
     SURFACE . . . . . . . .   24.21        784   100.0   784     CRMSALL 
     BURIED  . . . . . . . .   19.70        711   100.0   711     CRMSALL 
     CORE  . . . . . . . . .   22.08       1059   100.0  1059     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     9.14     18   100.0    18      13-AVCSFQKSGSCPGSGLRT-30   
 CA  LOOP  2    18.85     18   100.0    18      43-TSLTNCPGSPFDITKISH-60   
 CA  LOOP  3     8.30      5   100.0     5      93-ESTFN-97   
 CA  LOOP  4    33.07      3   100.0     3     127-GRT-129  
 CA  LOOP  5    41.14      7   100.0     7     153-TDPQTKV-159  
 CA  LOOP  6    13.29      3   100.0     3     171-QDG-173  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     9.29     87   100.0    87      13-AVCSFQKSGSCPGSGLRT-30   
 MC  LOOP  2    18.90     89   100.0    89      43-TSLTNCPGSPFDITKISH-60   
 MC  LOOP  3     8.37     25   100.0    25      93-ESTFN-97   
 MC  LOOP  4    33.16     14   100.0    14     127-GRT-129  
 MC  LOOP  5    40.93     35   100.0    35     153-TDPQTKV-159  
 MC  LOOP  6    13.35     14   100.0    14     171-QDG-173  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     9.94    122   100.0   122      13-AVCSFQKSGSCPGSGLRT-30   
 ALL LOOP  2    19.31    133   100.0   133      43-TSLTNCPGSPFDITKISH-60   
 ALL LOOP  3     9.83     41   100.0    41      93-ESTFN-97   
 ALL LOOP  4    33.36     22   100.0    22     127-GRT-129  
 ALL LOOP  5    41.75     54   100.0    54     153-TDPQTKV-159  
 ALL LOOP  6    13.90     21   100.0    21     171-QDG-173  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     5.62     18   100.0    18      13-AVCSFQKSGSCPGSGLRT-30   
 CA  LOOP  2     6.08     18   100.0    18      43-TSLTNCPGSPFDITKISH-60   
 CA  LOOP  3     2.82      5   100.0     5      93-ESTFN-97   
 CA  LOOP  4     0.72      3   100.0     3     127-GRT-129  
 CA  LOOP  5     2.30      7   100.0     7     153-TDPQTKV-159  
 CA  LOOP  6     0.51      3   100.0     3     171-QDG-173  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     5.66     87   100.0    87      13-AVCSFQKSGSCPGSGLRT-30   
 MC  LOOP  2     6.16     89   100.0    89      43-TSLTNCPGSPFDITKISH-60   
 MC  LOOP  3     3.29     25   100.0    25      93-ESTFN-97   
 MC  LOOP  4     2.11     14   100.0    14     127-GRT-129  
 MC  LOOP  5     2.74     35   100.0    35     153-TDPQTKV-159  
 MC  LOOP  6     1.55     14   100.0    14     171-QDG-173  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     6.21    122   100.0   122      13-AVCSFQKSGSCPGSGLRT-30   
 ALL LOOP  2     7.37    133   100.0   133      43-TSLTNCPGSPFDITKISH-60   
 ALL LOOP  3     5.25     41   100.0    41      93-ESTFN-97   
 ALL LOOP  4     2.80     22   100.0    22     127-GRT-129  
 ALL LOOP  5     4.21     54   100.0    54     153-TDPQTKV-159  
 ALL LOOP  6     3.61     21   100.0    21     171-QDG-173  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   11.244      0.351       0.202    190   100.0   190     ERRCA  
     WELL ORDERED  . . . . .   11.310      0.352       0.203    187   100.0   187     ERRCA  
     NO INTER CONTACTS . . .   11.729      0.363       0.206    139   100.0   139     ERRCA  
     SHIFTED CHAIN . . . . .   12.407      0.374       0.214    152   100.0   152     ERRCA  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRCA  
     SECONDARY STRUCTURE . .   11.174      0.365       0.221    102   100.0   102     ERRCA  
     LARGE SHIFTS/INSERTIONS   10.893      0.343       0.204     60   100.0    60     ERRCA  
     SURFACE . . . . . . . .   12.605      0.376       0.208    104   100.0   104     ERRCA  
     BURIED  . . . . . . . .    9.597      0.320       0.195     86   100.0    86     ERRCA  
     CORE  . . . . . . . . .   11.405      0.354       0.202    130   100.0   130     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   11.270      0.350       0.202    935   100.0   935     ERRMC  
     WELL ORDERED  . . . . .   11.317      0.351       0.203    917   100.0   917     ERRMC  
     NO INTER CONTACTS . . .   11.751      0.362       0.206    683   100.0   683     ERRMC  
     SHIFTED CHAIN . . . . .   12.433      0.372       0.214    746   100.0   746     ERRMC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRMC  
     SECONDARY STRUCTURE . .   11.115      0.360       0.218    506   100.0   506     ERRMC  
     LARGE SHIFTS/INSERTIONS   10.969      0.344       0.205    293   100.0   293     ERRMC  
     SURFACE . . . . . . . .   12.688      0.376       0.209    512   100.0   512     ERRMC  
     BURIED  . . . . . . . .    9.554      0.318       0.195    423   100.0   423     ERRMC  
     CORE  . . . . . . . . .   11.408      0.353       0.201    642   100.0   642     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   12.117      0.363       0.203    735   100.0   735     ERRSC  
     WELL ORDERED  . . . . .   11.633      0.354       0.200    651   100.0   651     ERRSC  
     NO INTER CONTACTS . . .   12.172      0.368       0.206    549   100.0   549     ERRSC  
     RELIABLE SIDE CHAINS  .   12.146      0.362       0.202    625   100.0   625     ERRSC  
     CHANGED ANGLES  . . . .   13.921      0.392       0.210    368   100.0   368     ERRSC  
     SHIFTED CHAIN . . . . .   13.512      0.388       0.215    557   100.0   557     ERRSC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRSC  
     SECONDARY STRUCTURE . .   11.912      0.363       0.208    426   100.0   426     ERRSC  
     LARGE SHIFTS/INSERTIONS   12.452      0.365       0.206    196   100.0   196     ERRSC  
     SURFACE . . . . . . . .   14.662      0.407       0.218    368   100.0   368     ERRSC  
     BURIED  . . . . . . . .    9.565      0.318       0.188    367   100.0   367     ERRSC  
     CORE  . . . . . . . . .   11.995      0.362       0.202    539   100.0   539     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   11.642      0.355       0.202   1495   100.0  1495     ERRALL 
     WELL ORDERED  . . . . .   11.426      0.351       0.201   1398   100.0  1398     ERRALL 
     NO INTER CONTACTS . . .   11.927      0.364       0.205   1105   100.0  1105     ERRALL 
     SHIFTED CHAIN . . . . .   12.895      0.379       0.214   1165   100.0  1165     ERRALL 
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRALL 
     SECONDARY STRUCTURE . .   11.513      0.362       0.213    834   100.0   834     ERRALL 
     LARGE SHIFTS/INSERTIONS   11.524      0.350       0.203    436   100.0   436     ERRALL 
     SURFACE . . . . . . . .   13.539      0.389       0.212    784   100.0   784     ERRALL 
     BURIED  . . . . . . . .    9.551      0.318       0.191    711   100.0   711     ERRALL 
     CORE  . . . . . . . . .   11.691      0.357       0.202   1059   100.0  1059     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         6         6        11        45     190     190   DISTCA 
CA  (P)      0.00      3.16      3.16      5.79     23.68             190   DISTCA 
CA  (RMS)    0.00      1.49      1.49      2.84      6.89                   DISTCA 
 
ALL (N)         3        18        32        89       313    1495    1495   DISTALL 
ALL (P)      0.20      1.20      2.14      5.95     20.94            1495   DISTALL 
ALL (RMS)    0.65      1.46      1.96      3.52      6.86                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         130           130            60          RMSLSI 
CA  (P)       68.42         68.42         31.58          RMSLSI 
CA  (RMS)      1.44         21.72         21.64          RMSLSI 
 
 
 
END of the results output 
