 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0082.inter 
# 
NUMBER-OF-PARENTS      1 
ALIGNMENT-DALI(1)      ../PARENTS/casp3.T0082.1bol.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
           TARGET 1495 atoms, MODEL 1495 atoms, 1495 common with TARGET 
           Number of atoms possible to evaluate: 1495 
 
 
 CA-RMS TARGET<->PARENT(1bol)	 2.220320 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    81.70           44.2   378   100.0   378     ARMSMC  
     WELL ORDERED  . . . . .    80.96           44.2   371   100.0   371     ARMSMC  
     NO INTER CONTACTS . . .    82.81           41.3   276   100.0   276     ARMSMC  
     SHIFTED CHAIN . . . . .    84.12           45.0   302   100.0   302     ARMSMC  
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSMC  
     SECONDARY STRUCTURE . .    74.72           51.0   204   100.0   204     ARMSMC  
     LARGE SHIFTS/INSERTIONS    91.97           36.7   120   100.0   120     ARMSMC  
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSMC  
     SURFACE . . . . . . . .    84.10           47.1   208   100.0   208     ARMSMC  
     BURIED  . . . . . . . .    78.66           40.6   170   100.0   170     ARMSMC  
     CORE  . . . . . . . . .    76.45           47.7   258   100.0   258     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    73.47           51.9   162   100.0   162     ARMSSC1 
     WELL ORDERED  . . . . .    73.57           52.0   148   100.0   148     ARMSSC1 
     NO INTER CONTACTS . . .    68.25           55.5   119   100.0   119     ARMSSC1 
     RELIABLE SIDE CHAINS  .    73.44           51.9   154   100.0   154     ARMSSC1 
     CHANGED ANGLES  . . . .    72.25           50.5    93   100.0    93     ARMSSC1 
     SHIFTED CHAIN . . . . .    74.26           52.8   127   100.0   127     ARMSSC1 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SECONDARY STRUCTURE . .    78.04           48.3    89   100.0    89     ARMSSC1 
     LARGE SHIFTS/INSERTIONS    70.48           51.0    51   100.0    51     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .    72.83           51.1    88   100.0    88     ARMSSC1 
     BURIED  . . . . . . . .    74.21           52.7    74   100.0    74     ARMSSC1 
     CORE  . . . . . . . . .    74.80           52.3   111   100.0   111     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    78.19           35.7   115   100.0   115     ARMSSC2 
     WELL ORDERED  . . . . .    78.38           35.6   101   100.0   101     ARMSSC2 
     NO INTER CONTACTS . . .    74.89           36.0    86   100.0    86     ARMSSC2 
     RELIABLE SIDE CHAINS  .    71.17           37.9    87   100.0    87     ARMSSC2 
     CHANGED ANGLES  . . . .    73.31           40.0    80   100.0    80     ARMSSC2 
     SHIFTED CHAIN . . . . .    81.76           34.1    88   100.0    88     ARMSSC2 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SECONDARY STRUCTURE . .    78.81           41.8    67   100.0    67     ARMSSC2 
     LARGE SHIFTS/INSERTIONS    93.32           26.7    30   100.0    30     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .    83.51           28.8    59   100.0    59     ARMSSC2 
     BURIED  . . . . . . . .    72.16           42.9    56   100.0    56     ARMSSC2 
     CORE  . . . . . . . . .    72.09           38.8    85   100.0    85     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    93.05           33.3    36   100.0    36     ARMSSC3 
     WELL ORDERED  . . . . .    83.70           42.1    19   100.0    19     ARMSSC3 
     NO INTER CONTACTS . . .    98.58           31.8    22   100.0    22     ARMSSC3 
     RELIABLE SIDE CHAINS  .    86.46           45.5    22   100.0    22     ARMSSC3 
     CHANGED ANGLES  . . . .    94.17           30.3    33   100.0    33     ARMSSC3 
     SHIFTED CHAIN . . . . .    94.82           34.5    29   100.0    29     ARMSSC3 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SECONDARY STRUCTURE . .    96.99           29.2    24   100.0    24     ARMSSC3 
     LARGE SHIFTS/INSERTIONS    88.67           30.0    10   100.0    10     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .    93.63           34.6    26   100.0    26     ARMSSC3 
     BURIED  . . . . . . . .    91.51           30.0    10   100.0    10     ARMSSC3 
     CORE  . . . . . . . . .    94.68           34.6    26   100.0    26     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    97.95           21.1    19   100.0    19     ARMSSC4 
     WELL ORDERED  . . . . .    87.71           22.2     9   100.0     9     ARMSSC4 
     NO INTER CONTACTS . . .    92.46           27.3    11   100.0    11     ARMSSC4 
     RELIABLE SIDE CHAINS  .    97.95           21.1    19   100.0    19     ARMSSC4 
     CHANGED ANGLES  . . . .   100.20           22.2    18   100.0    18     ARMSSC4 
     SHIFTED CHAIN . . . . .   100.30           23.5    17   100.0    17     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SECONDARY STRUCTURE . .   106.80            8.3    12   100.0    12     ARMSSC4 
     LARGE SHIFTS/INSERTIONS    90.07           33.3     6   100.0     6     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .    89.89           25.0    16   100.0    16     ARMSSC4 
     BURIED  . . . . . . . .   132.96            0.0     3   100.0     3     ARMSSC4 
     CORE  . . . . . . . . .   101.39           15.4    13   100.0    13     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =   0.80008     r(1,2) =   0.24747     r(1,3) =   0.54646 
 r(2,1) =   0.19149     r(2,2) =   0.75793     r(2,3) =  -0.62360 
 r(3,1) =  -0.56850     r(3,2) =   0.60357     r(3,3) =   0.55902 
THE OFFSET VECTOR: 
 v(1) = -14.94645     v(2) =  -0.42877     v(3) =  21.89604 
 
 Number of iteration 27                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   2.02           (Number of atoms:   10) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   22.85        190   100.0   190     CRMSCA  
     CRN = ALL/NP  . . . . .    0.1203                            CRMSCA  
     WELL ORDERED  . . . . .   22.98        187   100.0   187     CRMSCA  
     NO INTER CONTACTS . . .   23.11        139   100.0   139     CRMSCA  
     SHIFTED CHAIN . . . . .   24.17        152   100.0   152     CRMSCA  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSCA  
     SECONDARY STRUCTURE . .   23.25        102   100.0   102     CRMSCA  
     SHIFTED SS UNITS  . . .   26.67         54   100.0    54     CRMSCA  
     LARGE SHIFTS/INSERTIONS   21.40         60   100.0    60     CRMSCA  
     SURFACE . . . . . . . .   24.09        104   100.0   104     CRMSCA  
     BURIED  . . . . . . . .   21.26         86   100.0    86     CRMSCA  
     CORE  . . . . . . . . .   23.49        130   100.0   130     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   22.89        935   100.0   935     CRMSMC  
     WELL ORDERED  . . . . .   23.01        917   100.0   917     CRMSMC  
     NO INTER CONTACTS . . .   23.14        683   100.0   683     CRMSMC  
     SHIFTED CHAIN . . . . .   24.21        746   100.0   746     CRMSMC  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSMC  
     SECONDARY STRUCTURE . .   23.25        506   100.0   506     CRMSMC  
     SHIFTED SS UNITS  . . .   26.64        267   100.0   267     CRMSMC  
     LARGE SHIFTS/INSERTIONS   21.39        293   100.0   293     CRMSMC  
     SURFACE . . . . . . . .   24.16        512   100.0   512     CRMSMC  
     BURIED  . . . . . . . .   21.24        423   100.0   423     CRMSMC  
     CORE  . . . . . . . . .   23.54        642   100.0   642     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   23.74        735   100.0   735     CRMSSC  
     WELL ORDERED  . . . . .   23.33        651   100.0   651     CRMSSC  
     NO INTER CONTACTS . . .   23.54        549   100.0   549     CRMSSC  
     RELIABLE SIDE CHAINS  .   23.97        625   100.0   625     CRMSSC  
     CHANGED ANGLES  . . . .   25.57        368   100.0   368     CRMSSC  
     SECONDARY STRUCTURE . .   24.00        426   100.0   426     CRMSSC  
     LARGE SHIFTS/INSERTIONS   22.75        196   100.0   196     CRMSSC  
     SURFACE . . . . . . . .   26.08        368   100.0   368     CRMSSC  
     BURIED  . . . . . . . .   21.13        367   100.0   367     CRMSSC  
     CORE  . . . . . . . . .   24.09        539   100.0   539     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   23.28       1495   100.0  1495     CRMSALL 
     WELL ORDERED  . . . . .   23.13       1398   100.0  1398     CRMSALL 
     NO INTER CONTACTS . . .   23.31       1105   100.0  1105     CRMSALL 
     SHIFTED CHAIN . . . . .   24.72       1165   100.0  1165     CRMSALL 
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSALL 
     SECONDARY STRUCTURE . .   23.64        834   100.0   834     CRMSALL 
     LARGE SHIFTS/INSERTIONS   21.93        436   100.0   436     CRMSALL 
     SURFACE . . . . . . . .   25.03        784   100.0   784     CRMSALL 
     BURIED  . . . . . . . .   21.18        711   100.0   711     CRMSALL 
     CORE  . . . . . . . . .   23.81       1059   100.0  1059     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     9.20     18   100.0    18      13-AVCSFQKSGSCPGSGLRT-30   
 CA  LOOP  2    16.55     18   100.0    18      43-TSLTNCPGSPFDITKISH-60   
 CA  LOOP  3     5.82      5   100.0     5      93-ESTFN-97   
 CA  LOOP  4    35.00      3   100.0     3     127-GRT-129  
 CA  LOOP  5    40.41      7   100.0     7     153-TDPQTKV-159  
 CA  LOOP  6    16.76      3   100.0     3     171-QDG-173  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     9.35     87   100.0    87      13-AVCSFQKSGSCPGSGLRT-30   
 MC  LOOP  2    16.55     89   100.0    89      43-TSLTNCPGSPFDITKISH-60   
 MC  LOOP  3     5.87     25   100.0    25      93-ESTFN-97   
 MC  LOOP  4    35.24     14   100.0    14     127-GRT-129  
 MC  LOOP  5    40.19     35   100.0    35     153-TDPQTKV-159  
 MC  LOOP  6    17.01     14   100.0    14     171-QDG-173  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     9.73    122   100.0   122      13-AVCSFQKSGSCPGSGLRT-30   
 ALL LOOP  2    17.06    133   100.0   133      43-TSLTNCPGSPFDITKISH-60   
 ALL LOOP  3     6.95     41   100.0    41      93-ESTFN-97   
 ALL LOOP  4    35.49     22   100.0    22     127-GRT-129  
 ALL LOOP  5    41.06     54   100.0    54     153-TDPQTKV-159  
 ALL LOOP  6    17.21     21   100.0    21     171-QDG-173  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     5.57     18   100.0    18      13-AVCSFQKSGSCPGSGLRT-30   
 CA  LOOP  2     4.77     18   100.0    18      43-TSLTNCPGSPFDITKISH-60   
 CA  LOOP  3     1.40      5   100.0     5      93-ESTFN-97   
 CA  LOOP  4     0.85      3   100.0     3     127-GRT-129  
 CA  LOOP  5     2.23      7   100.0     7     153-TDPQTKV-159  
 CA  LOOP  6     0.51      3   100.0     3     171-QDG-173  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     5.64     87   100.0    87      13-AVCSFQKSGSCPGSGLRT-30   
 MC  LOOP  2     4.81     89   100.0    89      43-TSLTNCPGSPFDITKISH-60   
 MC  LOOP  3     2.06     25   100.0    25      93-ESTFN-97   
 MC  LOOP  4     2.19     14   100.0    14     127-GRT-129  
 MC  LOOP  5     2.63     35   100.0    35     153-TDPQTKV-159  
 MC  LOOP  6     1.57     14   100.0    14     171-QDG-173  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     6.23    122   100.0   122      13-AVCSFQKSGSCPGSGLRT-30   
 ALL LOOP  2     5.82    133   100.0   133      43-TSLTNCPGSPFDITKISH-60   
 ALL LOOP  3     4.49     41   100.0    41      93-ESTFN-97   
 ALL LOOP  4     2.48     22   100.0    22     127-GRT-129  
 ALL LOOP  5     4.15     54   100.0    54     153-TDPQTKV-159  
 ALL LOOP  6     3.64     21   100.0    21     171-QDG-173  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   12.289      0.373       0.219    190   100.0   190     ERRCA  
     WELL ORDERED  . . . . .   12.425      0.376       0.221    187   100.0   187     ERRCA  
     NO INTER CONTACTS . . .   12.655      0.381       0.218    139   100.0   139     ERRCA  
     SHIFTED CHAIN . . . . .   13.458      0.392       0.227    152   100.0   152     ERRCA  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRCA  
     SECONDARY STRUCTURE . .   12.960      0.400       0.244    102   100.0   102     ERRCA  
     LARGE SHIFTS/INSERTIONS   10.752      0.348       0.216     60   100.0    60     ERRCA  
     SURFACE . . . . . . . .   13.208      0.378       0.212    104   100.0   104     ERRCA  
     BURIED  . . . . . . . .   11.177      0.366       0.228     86   100.0    86     ERRCA  
     CORE  . . . . . . . . .   12.998      0.384       0.220    130   100.0   130     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   12.303      0.371       0.219    935   100.0   935     ERRMC  
     WELL ORDERED  . . . . .   12.427      0.374       0.221    917   100.0   917     ERRMC  
     NO INTER CONTACTS . . .   12.648      0.379       0.217    683   100.0   683     ERRMC  
     SHIFTED CHAIN . . . . .   13.490      0.391       0.228    746   100.0   746     ERRMC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRMC  
     SECONDARY STRUCTURE . .   12.893      0.394       0.241    506   100.0   506     ERRMC  
     LARGE SHIFTS/INSERTIONS   10.764      0.347       0.222    293   100.0   293     ERRMC  
     SURFACE . . . . . . . .   13.275      0.379       0.211    512   100.0   512     ERRMC  
     BURIED  . . . . . . . .   11.126      0.362       0.229    423   100.0   423     ERRMC  
     CORE  . . . . . . . . .   13.005      0.382       0.218    642   100.0   642     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   12.771      0.364       0.200    735   100.0   735     ERRSC  
     WELL ORDERED  . . . . .   12.409      0.358       0.199    651   100.0   651     ERRSC  
     NO INTER CONTACTS . . .   12.825      0.373       0.205    549   100.0   549     ERRSC  
     RELIABLE SIDE CHAINS  .   13.002      0.368       0.203    625   100.0   625     ERRSC  
     CHANGED ANGLES  . . . .   14.428      0.390       0.207    368   100.0   368     ERRSC  
     SHIFTED CHAIN . . . . .   14.252      0.388       0.211    557   100.0   557     ERRSC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRSC  
     SECONDARY STRUCTURE . .   13.214      0.380       0.217    426   100.0   426     ERRSC  
     LARGE SHIFTS/INSERTIONS   11.366      0.329       0.185    196   100.0   196     ERRSC  
     SURFACE . . . . . . . .   14.841      0.391       0.202    368   100.0   368     ERRSC  
     BURIED  . . . . . . . .   10.696      0.336       0.199    367   100.0   367     ERRSC  
     CORE  . . . . . . . . .   13.282      0.376       0.206    539   100.0   539     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   12.523      0.369       0.211   1495   100.0  1495     ERRALL 
     WELL ORDERED  . . . . .   12.415      0.368       0.212   1398   100.0  1398     ERRALL 
     NO INTER CONTACTS . . .   12.721      0.376       0.212   1105   100.0  1105     ERRALL 
     SHIFTED CHAIN . . . . .   13.835      0.390       0.220   1165   100.0  1165     ERRALL 
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRALL 
     SECONDARY STRUCTURE . .   13.083      0.388       0.231    834   100.0   834     ERRALL 
     LARGE SHIFTS/INSERTIONS   10.998      0.340       0.207    436   100.0   436     ERRALL 
     SURFACE . . . . . . . .   13.978      0.385       0.208    784   100.0   784     ERRALL 
     BURIED  . . . . . . . .   10.919      0.351       0.215    711   100.0   711     ERRALL 
     CORE  . . . . . . . . .   13.151      0.380       0.213   1059   100.0  1059     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         3        10        15        43     190     190   DISTCA 
CA  (P)      0.00      1.58      5.26      7.89     22.63             190   DISTCA 
CA  (RMS)    0.00      1.46      2.02      2.88      6.41                   DISTCA 
 
ALL (N)         2        15        40       101       311    1495    1495   DISTALL 
ALL (P)      0.13      1.00      2.68      6.76     20.80            1495   DISTALL 
ALL (RMS)    0.91      1.42      2.11      3.38      6.76                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         130           130            60          RMSLSI 
CA  (P)       68.42         68.42         31.58          RMSLSI 
CA  (RMS)      1.44         23.49         21.40          RMSLSI 
 
 
 
END of the results output 
