 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0082.inter 
# 
NUMBER-OF-PARENTS      1 
ALIGNMENT-DALI(1)      ../PARENTS/casp3.T0082.1bol.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
           TARGET 1495 atoms, MODEL 1495 atoms, 1495 common with TARGET 
           Number of atoms possible to evaluate: 1495 
 
 
 CA-RMS TARGET<->PARENT(1bol)	 2.220320 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    80.99           42.1   378   100.0   378     ARMSMC  
     WELL ORDERED  . . . . .    80.79           42.6   371   100.0   371     ARMSMC  
     NO INTER CONTACTS . . .    79.95           42.4   276   100.0   276     ARMSMC  
     SHIFTED CHAIN . . . . .    82.89           41.4   302   100.0   302     ARMSMC  
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSMC  
     SECONDARY STRUCTURE . .    77.73           49.5   204   100.0   204     ARMSMC  
     LARGE SHIFTS/INSERTIONS    90.05           36.7   120   100.0   120     ARMSMC  
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSMC  
     SURFACE . . . . . . . .    84.13           42.3   208   100.0   208     ARMSMC  
     BURIED  . . . . . . . .    76.96           41.8   170   100.0   170     ARMSMC  
     CORE  . . . . . . . . .    76.40           44.6   258   100.0   258     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    76.28           48.1   162   100.0   162     ARMSSC1 
     WELL ORDERED  . . . . .    75.45           49.3   148   100.0   148     ARMSSC1 
     NO INTER CONTACTS . . .    71.42           52.1   119   100.0   119     ARMSSC1 
     RELIABLE SIDE CHAINS  .    76.39           48.1   154   100.0   154     ARMSSC1 
     CHANGED ANGLES  . . . .    73.68           46.2    93   100.0    93     ARMSSC1 
     SHIFTED CHAIN . . . . .    75.98           48.0   127   100.0   127     ARMSSC1 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SECONDARY STRUCTURE . .    77.59           52.8    89   100.0    89     ARMSSC1 
     LARGE SHIFTS/INSERTIONS    76.73           41.2    51   100.0    51     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .    80.02           45.5    88   100.0    88     ARMSSC1 
     BURIED  . . . . . . . .    71.58           51.4    74   100.0    74     ARMSSC1 
     CORE  . . . . . . . . .    76.08           51.4   111   100.0   111     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    73.09           36.5   115   100.0   115     ARMSSC2 
     WELL ORDERED  . . . . .    71.12           38.6   101   100.0   101     ARMSSC2 
     NO INTER CONTACTS . . .    68.63           38.4    86   100.0    86     ARMSSC2 
     RELIABLE SIDE CHAINS  .    69.26           35.6    87   100.0    87     ARMSSC2 
     CHANGED ANGLES  . . . .    70.75           35.0    80   100.0    80     ARMSSC2 
     SHIFTED CHAIN . . . . .    73.83           35.2    88   100.0    88     ARMSSC2 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SECONDARY STRUCTURE . .    68.12           46.3    67   100.0    67     ARMSSC2 
     LARGE SHIFTS/INSERTIONS    82.21           33.3    30   100.0    30     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .    77.48           30.5    59   100.0    59     ARMSSC2 
     BURIED  . . . . . . . .    68.15           42.9    56   100.0    56     ARMSSC2 
     CORE  . . . . . . . . .    69.58           37.6    85   100.0    85     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    85.90           41.7    36   100.0    36     ARMSSC3 
     WELL ORDERED  . . . . .    72.75           42.1    19   100.0    19     ARMSSC3 
     NO INTER CONTACTS . . .    85.06           40.9    22   100.0    22     ARMSSC3 
     RELIABLE SIDE CHAINS  .    77.01           59.1    22   100.0    22     ARMSSC3 
     CHANGED ANGLES  . . . .    87.27           39.4    33   100.0    33     ARMSSC3 
     SHIFTED CHAIN . . . . .    86.53           44.8    29   100.0    29     ARMSSC3 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SECONDARY STRUCTURE . .    87.15           41.7    24   100.0    24     ARMSSC3 
     LARGE SHIFTS/INSERTIONS    90.41           40.0    10   100.0    10     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .    87.50           46.2    26   100.0    26     ARMSSC3 
     BURIED  . . . . . . . .    81.60           30.0    10   100.0    10     ARMSSC3 
     CORE  . . . . . . . . .    84.10           42.3    26   100.0    26     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .   103.65           15.8    19   100.0    19     ARMSSC4 
     WELL ORDERED  . . . . .    96.56           11.1     9   100.0     9     ARMSSC4 
     NO INTER CONTACTS . . .   102.87           18.2    11   100.0    11     ARMSSC4 
     RELIABLE SIDE CHAINS  .   103.65           15.8    19   100.0    19     ARMSSC4 
     CHANGED ANGLES  . . . .   106.14           16.7    18   100.0    18     ARMSSC4 
     SHIFTED CHAIN . . . . .   108.15           17.6    17   100.0    17     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SECONDARY STRUCTURE . .   107.29            8.3    12   100.0    12     ARMSSC4 
     LARGE SHIFTS/INSERTIONS   101.69           33.3     6   100.0     6     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .    96.64           18.8    16   100.0    16     ARMSSC4 
     BURIED  . . . . . . . .   135.00            0.0     3   100.0     3     ARMSSC4 
     CORE  . . . . . . . . .   104.53            7.7    13   100.0    13     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =   0.78570     r(1,2) =   0.52036     r(1,3) =   0.33450 
 r(2,1) =  -0.12215     r(2,2) =   0.66060     r(2,3) =  -0.74073 
 r(3,1) =  -0.60642     r(3,2) =   0.54114     r(3,3) =   0.58260 
THE OFFSET VECTOR: 
 v(1) = -21.22518     v(2) =  21.31586     v(3) =  32.21989 
 
 Number of iteration 25                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.62           (Number of atoms:    7) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   19.56        190   100.0   190     CRMSCA  
     CRN = ALL/NP  . . . . .    0.1029                            CRMSCA  
     WELL ORDERED  . . . . .   19.65        187   100.0   187     CRMSCA  
     NO INTER CONTACTS . . .   19.84        139   100.0   139     CRMSCA  
     SHIFTED CHAIN . . . . .   20.19        152   100.0   152     CRMSCA  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSCA  
     SECONDARY STRUCTURE . .   19.59        102   100.0   102     CRMSCA  
     SHIFTED SS UNITS  . . .   20.36         54   100.0    54     CRMSCA  
     LARGE SHIFTS/INSERTIONS   19.89         60   100.0    60     CRMSCA  
     SURFACE . . . . . . . .   20.10        104   100.0   104     CRMSCA  
     BURIED  . . . . . . . .   18.87         86   100.0    86     CRMSCA  
     CORE  . . . . . . . . .   19.40        130   100.0   130     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   19.59        935   100.0   935     CRMSMC  
     WELL ORDERED  . . . . .   19.67        917   100.0   917     CRMSMC  
     NO INTER CONTACTS . . .   19.89        683   100.0   683     CRMSMC  
     SHIFTED CHAIN . . . . .   20.22        746   100.0   746     CRMSMC  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSMC  
     SECONDARY STRUCTURE . .   19.62        506   100.0   506     CRMSMC  
     SHIFTED SS UNITS  . . .   20.35        267   100.0   267     CRMSMC  
     LARGE SHIFTS/INSERTIONS   19.90        293   100.0   293     CRMSMC  
     SURFACE . . . . . . . .   20.17        512   100.0   512     CRMSMC  
     BURIED  . . . . . . . .   18.87        423   100.0   423     CRMSMC  
     CORE  . . . . . . . . .   19.45        642   100.0   642     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   20.72        735   100.0   735     CRMSSC  
     WELL ORDERED  . . . . .   20.55        651   100.0   651     CRMSSC  
     NO INTER CONTACTS . . .   20.73        549   100.0   549     CRMSSC  
     RELIABLE SIDE CHAINS  .   20.88        625   100.0   625     CRMSSC  
     CHANGED ANGLES  . . . .   22.64        368   100.0   368     CRMSSC  
     SECONDARY STRUCTURE . .   20.67        426   100.0   426     CRMSSC  
     LARGE SHIFTS/INSERTIONS   21.43        196   100.0   196     CRMSSC  
     SURFACE . . . . . . . .   21.96        368   100.0   368     CRMSSC  
     BURIED  . . . . . . . .   19.40        367   100.0   367     CRMSSC  
     CORE  . . . . . . . . .   20.45        539   100.0   539     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   20.10       1495   100.0  1495     CRMSALL 
     WELL ORDERED  . . . . .   20.03       1398   100.0  1398     CRMSALL 
     NO INTER CONTACTS . . .   20.27       1105   100.0  1105     CRMSALL 
     SHIFTED CHAIN . . . . .   20.77       1165   100.0  1165     CRMSALL 
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSALL 
     SECONDARY STRUCTURE . .   20.15        834   100.0   834     CRMSALL 
     LARGE SHIFTS/INSERTIONS   20.51        436   100.0   436     CRMSALL 
     SURFACE . . . . . . . .   20.94        784   100.0   784     CRMSALL 
     BURIED  . . . . . . . .   19.14        711   100.0   711     CRMSALL 
     CORE  . . . . . . . . .   19.94       1059   100.0  1059     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1    15.02     18   100.0    18      13-AVCSFQKSGSCPGSGLRT-30   
 CA  LOOP  2    17.33     18   100.0    18      43-TSLTNCPGSPFDITKISH-60   
 CA  LOOP  3     6.06      5   100.0     5      93-ESTFN-97   
 CA  LOOP  4    25.50      3   100.0     3     127-GRT-129  
 CA  LOOP  5    34.22      7   100.0     7     153-TDPQTKV-159  
 CA  LOOP  6    19.44      3   100.0     3     171-QDG-173  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1    15.06     87   100.0    87      13-AVCSFQKSGSCPGSGLRT-30   
 MC  LOOP  2    17.37     89   100.0    89      43-TSLTNCPGSPFDITKISH-60   
 MC  LOOP  3     6.25     25   100.0    25      93-ESTFN-97   
 MC  LOOP  4    25.58     14   100.0    14     127-GRT-129  
 MC  LOOP  5    34.01     35   100.0    35     153-TDPQTKV-159  
 MC  LOOP  6    19.47     14   100.0    14     171-QDG-173  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1    15.49    122   100.0   122      13-AVCSFQKSGSCPGSGLRT-30   
 ALL LOOP  2    17.85    133   100.0   133      43-TSLTNCPGSPFDITKISH-60   
 ALL LOOP  3     7.78     41   100.0    41      93-ESTFN-97   
 ALL LOOP  4    25.73     22   100.0    22     127-GRT-129  
 ALL LOOP  5    35.05     54   100.0    54     153-TDPQTKV-159  
 ALL LOOP  6    20.25     21   100.0    21     171-QDG-173  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     5.70     18   100.0    18      13-AVCSFQKSGSCPGSGLRT-30   
 CA  LOOP  2     6.01     18   100.0    18      43-TSLTNCPGSPFDITKISH-60   
 CA  LOOP  3     1.89      5   100.0     5      93-ESTFN-97   
 CA  LOOP  4     0.80      3   100.0     3     127-GRT-129  
 CA  LOOP  5     2.26      7   100.0     7     153-TDPQTKV-159  
 CA  LOOP  6     0.34      3   100.0     3     171-QDG-173  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     5.81     87   100.0    87      13-AVCSFQKSGSCPGSGLRT-30   
 MC  LOOP  2     6.02     89   100.0    89      43-TSLTNCPGSPFDITKISH-60   
 MC  LOOP  3     2.17     25   100.0    25      93-ESTFN-97   
 MC  LOOP  4     2.17     14   100.0    14     127-GRT-129  
 MC  LOOP  5     2.69     35   100.0    35     153-TDPQTKV-159  
 MC  LOOP  6     1.46     14   100.0    14     171-QDG-173  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     6.40    122   100.0   122      13-AVCSFQKSGSCPGSGLRT-30   
 ALL LOOP  2     7.01    133   100.0   133      43-TSLTNCPGSPFDITKISH-60   
 ALL LOOP  3     4.76     41   100.0    41      93-ESTFN-97   
 ALL LOOP  4     2.28     22   100.0    22     127-GRT-129  
 ALL LOOP  5     4.15     54   100.0    54     153-TDPQTKV-159  
 ALL LOOP  6     3.72     21   100.0    21     171-QDG-173  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    9.553      0.324       0.186    190   100.0   190     ERRCA  
     WELL ORDERED  . . . . .    9.652      0.326       0.188    187   100.0   187     ERRCA  
     NO INTER CONTACTS . . .    9.811      0.333       0.192    139   100.0   139     ERRCA  
     SHIFTED CHAIN . . . . .   10.207      0.343       0.202    152   100.0   152     ERRCA  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRCA  
     SECONDARY STRUCTURE . .    9.402      0.307       0.167    102   100.0   102     ERRCA  
     LARGE SHIFTS/INSERTIONS    9.789      0.319       0.174     60   100.0    60     ERRCA  
     SURFACE . . . . . . . .   10.077      0.331       0.184    104   100.0   104     ERRCA  
     BURIED  . . . . . . . .    8.920      0.316       0.189     86   100.0    86     ERRCA  
     CORE  . . . . . . . . .    9.445      0.326       0.192    130   100.0   130     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    9.555      0.322       0.186    935   100.0   935     ERRMC  
     WELL ORDERED  . . . . .    9.637      0.324       0.188    917   100.0   917     ERRMC  
     NO INTER CONTACTS . . .    9.842      0.332       0.192    683   100.0   683     ERRMC  
     SHIFTED CHAIN . . . . .   10.200      0.340       0.202    746   100.0   746     ERRMC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRMC  
     SECONDARY STRUCTURE . .    9.444      0.308       0.170    506   100.0   506     ERRMC  
     LARGE SHIFTS/INSERTIONS    9.763      0.318       0.171    293   100.0   293     ERRMC  
     SURFACE . . . . . . . .   10.085      0.329       0.185    512   100.0   512     ERRMC  
     BURIED  . . . . . . . .    8.914      0.314       0.188    423   100.0   423     ERRMC  
     CORE  . . . . . . . . .    9.460      0.324       0.193    642   100.0   642     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   10.309      0.327       0.178    735   100.0   735     ERRSC  
     WELL ORDERED  . . . . .   10.174      0.325       0.178    651   100.0   651     ERRSC  
     NO INTER CONTACTS . . .   10.405      0.333       0.182    549   100.0   549     ERRSC  
     RELIABLE SIDE CHAINS  .   10.425      0.328       0.178    625   100.0   625     ERRSC  
     CHANGED ANGLES  . . . .   11.917      0.352       0.186    368   100.0   368     ERRSC  
     SHIFTED CHAIN . . . . .   10.996      0.343       0.190    557   100.0   557     ERRSC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRSC  
     SECONDARY STRUCTURE . .   10.401      0.329       0.177    426   100.0   426     ERRSC  
     LARGE SHIFTS/INSERTIONS   10.819      0.327       0.167    196   100.0   196     ERRSC  
     SURFACE . . . . . . . .   11.476      0.349       0.188    368   100.0   368     ERRSC  
     BURIED  . . . . . . . .    9.139      0.304       0.168    367   100.0   367     ERRSC  
     CORE  . . . . . . . . .   10.124      0.326       0.182    539   100.0   539     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    9.893      0.324       0.183   1495   100.0  1495     ERRALL 
     WELL ORDERED  . . . . .    9.856      0.324       0.184   1398   100.0  1398     ERRALL 
     NO INTER CONTACTS . . .   10.093      0.332       0.188   1105   100.0  1105     ERRALL 
     SHIFTED CHAIN . . . . .   10.547      0.341       0.197   1165   100.0  1165     ERRALL 
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRALL 
     SECONDARY STRUCTURE . .    9.919      0.319       0.174    834   100.0   834     ERRALL 
     LARGE SHIFTS/INSERTIONS   10.171      0.322       0.170    436   100.0   436     ERRALL 
     SURFACE . . . . . . . .   10.680      0.338       0.186    784   100.0   784     ERRALL 
     BURIED  . . . . . . . .    9.026      0.309       0.179    711   100.0   711     ERRALL 
     CORE  . . . . . . . . .    9.779      0.325       0.188   1059   100.0  1059     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         2         5         7        10        37     190     190   DISTCA 
CA  (P)      1.05      2.63      3.68      5.26     19.47             190   DISTCA 
CA  (RMS)    0.61      1.23      1.62      2.75      6.78                   DISTCA 
 
ALL (N)         9        19        43        73       270    1495    1495   DISTALL 
ALL (P)      0.60      1.27      2.88      4.88     18.06            1495   DISTALL 
ALL (RMS)    0.68      1.29      2.02      3.09      7.05                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         130           130            60          RMSLSI 
CA  (P)       68.42         68.42         31.58          RMSLSI 
CA  (RMS)      1.44         19.40         19.89          RMSLSI 
 
 
 
END of the results output 
