 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0082.inter 
# 
NUMBER-OF-PARENTS      1 
ALIGNMENT-DALI(1)      ../PARENTS/casp3.T0082.1bol.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 1495 atoms, MODEL 826 atoms, 826 common with TARGET 
           Number of atoms possible to evaluate: 826 
 
 
 CA-RMS TARGET<->PARENT(1bol)	 2.220320 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    43.52           80.2   268    70.9   378     ARMSMC  
     WELL ORDERED  . . . . .    43.48           80.4   265    71.4   371     ARMSMC  
     NO INTER CONTACTS . . .    42.35           78.8   208    75.4   276     ARMSMC  
     SHIFTED CHAIN . . . . .    47.12           76.2   202    66.9   302     ARMSMC  
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSMC  
     SECONDARY STRUCTURE . .    23.78           92.4   172    84.3   204     ARMSMC  
     LARGE SHIFTS/INSERTIONS    77.22           45.8    59    49.2   120     ARMSMC  
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSMC  
     SURFACE . . . . . . . .    48.85           74.5   137    65.9   208     ARMSMC  
     BURIED  . . . . . . . .    37.14           86.3   131    77.1   170     ARMSMC  
     CORE  . . . . . . . . .    27.31           90.0   209    81.0   258     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    31.68           86.8    38    23.5   162     ARMSSC1 
     WELL ORDERED  . . . . .    31.68           86.8    38    25.7   148     ARMSSC1 
     NO INTER CONTACTS . . .    33.82           84.8    33    27.7   119     ARMSSC1 
     RELIABLE SIDE CHAINS  .    32.46           86.1    36    23.4   154     ARMSSC1 
     CHANGED ANGLES  . . . .    67.90           37.5     8     8.6    93     ARMSSC1 
     SHIFTED CHAIN . . . . .    31.43           87.5    24    18.9   127     ARMSSC1 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SECONDARY STRUCTURE . .    36.08           83.3    24    27.0    89     ARMSSC1 
     LARGE SHIFTS/INSERTIONS    41.07           83.3     6    11.8    51     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .    45.86           78.6    14    15.9    88     ARMSSC1 
     BURIED  . . . . . . . .    19.03           91.7    24    32.4    74     ARMSSC1 
     CORE  . . . . . . . . .    29.59           87.5    32    28.8   111     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    57.75           77.8    27    23.5   115     ARMSSC2 
     WELL ORDERED  . . . . .    57.75           77.8    27    26.7   101     ARMSSC2 
     NO INTER CONTACTS . . .    60.54           79.2    24    27.9    86     ARMSSC2 
     RELIABLE SIDE CHAINS  .    53.02           76.2    21    24.1    87     ARMSSC2 
     CHANGED ANGLES  . . . .    93.24           40.0    10    12.5    80     ARMSSC2 
     SHIFTED CHAIN . . . . .    73.09           68.8    16    18.2    88     ARMSSC2 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SECONDARY STRUCTURE . .    68.95           72.2    18    26.9    67     ARMSSC2 
     LARGE SHIFTS/INSERTIONS    69.78           66.7     3    10.0    30     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .    81.74           55.6     9    15.3    59     ARMSSC2 
     BURIED  . . . . . . . .    40.77           88.9    18    32.1    56     ARMSSC2 
     CORE  . . . . . . . . .    56.07           79.2    24    28.2    85     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    79.78           50.0     4    11.1    36     ARMSSC3 
     WELL ORDERED  . . . . .    92.12           33.3     3    15.8    19     ARMSSC3 
     NO INTER CONTACTS . . .    79.78           50.0     4    18.2    22     ARMSSC3 
     RELIABLE SIDE CHAINS  .    52.77           66.7     3    13.6    22     ARMSSC3 
     CHANGED ANGLES  . . . .   111.67            0.0     2     6.1    33     ARMSSC3 
     SHIFTED CHAIN . . . . .    52.77           66.7     3    10.3    29     ARMSSC3 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SECONDARY STRUCTURE . .    79.78           50.0     4    16.7    24     ARMSSC3 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    10     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .     0.06          100.0     1     3.8    26     ARMSSC3 
     BURIED  . . . . . . . .    92.12           33.3     3    30.0    10     ARMSSC3 
     CORE  . . . . . . . . .    79.78           50.0     4    15.4    26     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .   127.15           50.0     2    10.5    19     ARMSSC4 
     WELL ORDERED  . . . . .   179.06            0.0     1    11.1     9     ARMSSC4 
     NO INTER CONTACTS . . .   127.15           50.0     2    18.2    11     ARMSSC4 
     RELIABLE SIDE CHAINS  .   127.15           50.0     2    10.5    19     ARMSSC4 
     CHANGED ANGLES  . . . .   179.06            0.0     1     5.6    18     ARMSSC4 
     SHIFTED CHAIN . . . . .   127.15           50.0     2    11.8    17     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SECONDARY STRUCTURE . .   127.15           50.0     2    16.7    12     ARMSSC4 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0     6     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .    16.38          100.0     1     6.2    16     ARMSSC4 
     BURIED  . . . . . . . .   179.06            0.0     1    33.3     3     ARMSSC4 
     CORE  . . . . . . . . .   127.15           50.0     2    15.4    13     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =   0.71045     r(1,2) =  -0.24266     r(1,3) =   0.66059 
 r(2,1) =  -0.58774     r(2,2) =  -0.72087     r(2,3) =   0.36730 
 r(3,1) =   0.38707     r(3,2) =  -0.64920     r(3,3) =  -0.65476 
THE OFFSET VECTOR: 
 v(1) =   3.78957     v(2) =  78.01895     v(3) =  31.70622 
 
 Number of iteration 49                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.41           (Number of atoms:  116) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    6.86        190   100.0   190     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0361                            CRMSCA  
     WELL ORDERED  . . . . .    6.90        187   100.0   187     CRMSCA  
     NO INTER CONTACTS . . .    6.50        139   100.0   139     CRMSCA  
     SHIFTED CHAIN . . . . .    6.85        152   100.0   152     CRMSCA  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSCA  
     SECONDARY STRUCTURE . .    6.72        102   100.0   102     CRMSCA  
     SHIFTED SS UNITS  . . .    2.56         54   100.0    54     CRMSCA  
     LARGE SHIFTS/INSERTIONS    9.13         60   100.0    60     CRMSCA  
     SURFACE . . . . . . . .    6.82        104   100.0   104     CRMSCA  
     BURIED  . . . . . . . .    6.91         86   100.0    86     CRMSCA  
     CORE  . . . . . . . . .    5.51        130   100.0   130     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    6.24        671    71.8   935     CRMSMC  
     WELL ORDERED  . . . . .    6.27        663    72.3   917     CRMSMC  
     NO INTER CONTACTS . . .    6.11        510    74.7   683     CRMSMC  
     SHIFTED CHAIN . . . . .    6.13        510    68.4   746     CRMSMC  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSMC  
     SECONDARY STRUCTURE . .    5.89        398    78.7   506     CRMSMC  
     SHIFTED SS UNITS  . . .    2.47        224    83.9   267     CRMSMC  
     LARGE SHIFTS/INSERTIONS    8.87        171    58.4   293     CRMSMC  
     SURFACE . . . . . . . .    6.40        349    68.2   512     CRMSMC  
     BURIED  . . . . . . . .    6.06        322    76.1   423     CRMSMC  
     CORE  . . . . . . . . .    5.04        500    77.9   642     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    4.56        195    26.5   735     CRMSSC  
     WELL ORDERED  . . . . .    4.54        193    29.6   651     CRMSSC  
     NO INTER CONTACTS . . .    4.40        175    31.9   549     CRMSSC  
     RELIABLE SIDE CHAINS  .    3.79        171    27.4   625     CRMSSC  
     CHANGED ANGLES  . . . .    6.27         44    12.0   368     CRMSSC  
     SECONDARY STRUCTURE . .    3.70        130    30.5   426     CRMSSC  
     LARGE SHIFTS/INSERTIONS   10.34         20    10.2   196     CRMSSC  
     SURFACE . . . . . . . .    6.72         52    14.1   368     CRMSSC  
     BURIED  . . . . . . . .    3.46        143    39.0   367     CRMSSC  
     CORE  . . . . . . . . .    3.31        175    32.5   539     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    5.94        826    55.3  1495     CRMSALL 
     WELL ORDERED  . . . . .    5.96        816    58.4  1398     CRMSALL 
     NO INTER CONTACTS . . .    5.76        650    58.8  1105     CRMSALL 
     SHIFTED CHAIN . . . . .    5.95        599    51.4  1165     CRMSALL 
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSALL 
     SECONDARY STRUCTURE . .    5.49        502    60.2   834     CRMSALL 
     LARGE SHIFTS/INSERTIONS    8.99        185    42.4   436     CRMSALL 
     SURFACE . . . . . . . .    6.43        387    49.4   784     CRMSALL 
     BURIED  . . . . . . . .    5.46        439    61.7   711     CRMSALL 
     CORE  . . . . . . . . .    4.70        641    60.5  1059     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1    12.81     18   100.0    18      13-AVCSFQKSGSCPGSGLRT-30   
 CA  LOOP  2     4.59     18   100.0    18      43-TSLTNCPGSPFDITKISH-60   
 CA  LOOP  3     3.31      5   100.0     5      93-ESTFN-97   
 CA  LOOP  4     3.98      3   100.0     3     127-GRT-129  
 CA  LOOP  5    14.11      7   100.0     7     153-TDPQTKV-159  
 CA  LOOP  6     6.22      3   100.0     3     171-QDG-173  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1    12.63     34    39.1    87      13-AVCSFQKSGSCPGSGLRT-30   
 MC  LOOP  2     4.86     58    65.2    89      43-TSLTNCPGSPFDITKISH-60   
 MC  LOOP  3     2.85     12    48.0    25      93-ESTFN-97   
 MC  LOOP  4     3.48     10    71.4    14     127-GRT-129  
 MC  LOOP  5    14.41     29    82.9    35     153-TDPQTKV-159  
 MC  LOOP  6     5.13     10    71.4    14     171-QDG-173  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1    12.74     36    29.5   122      13-AVCSFQKSGSCPGSGLRT-30   
 ALL LOOP  2     4.96     61    45.9   133      43-TSLTNCPGSPFDITKISH-60   
 ALL LOOP  3     2.87     14    34.1    41      93-ESTFN-97   
 ALL LOOP  4     3.59     12    54.5    22     127-GRT-129  
 ALL LOOP  5    14.71     31    57.4    54     153-TDPQTKV-159  
 ALL LOOP  6     6.06     13    61.9    21     171-QDG-173  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     5.00     18   100.0    18      13-AVCSFQKSGSCPGSGLRT-30   
 CA  LOOP  2     2.80     18   100.0    18      43-TSLTNCPGSPFDITKISH-60   
 CA  LOOP  3     2.32      5   100.0     5      93-ESTFN-97   
 CA  LOOP  4     0.13      3   100.0     3     127-GRT-129  
 CA  LOOP  5     4.25      7   100.0     7     153-TDPQTKV-159  
 CA  LOOP  6     0.65      3   100.0     3     171-QDG-173  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     4.58     34    39.1    87      13-AVCSFQKSGSCPGSGLRT-30   
 MC  LOOP  2     2.88     58    65.2    89      43-TSLTNCPGSPFDITKISH-60   
 MC  LOOP  3     2.45     12    48.0    25      93-ESTFN-97   
 MC  LOOP  4     0.76     10    71.4    14     127-GRT-129  
 MC  LOOP  5     4.51     29    82.9    35     153-TDPQTKV-159  
 MC  LOOP  6     1.44     10    71.4    14     171-QDG-173  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     4.73     36    29.5   122      13-AVCSFQKSGSCPGSGLRT-30   
 ALL LOOP  2     3.21     61    45.9   133      43-TSLTNCPGSPFDITKISH-60   
 ALL LOOP  3     2.66     14    34.1    41      93-ESTFN-97   
 ALL LOOP  4     0.84     12    54.5    22     127-GRT-129  
 ALL LOOP  5     4.88     31    57.4    54     153-TDPQTKV-159  
 ALL LOOP  6     1.47     13    61.9    21     171-QDG-173  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    3.062      0.340       0.296    190   100.0   190     ERRCA  
     WELL ORDERED  . . . . .    3.107      0.344       0.300    187   100.0   187     ERRCA  
     NO INTER CONTACTS . . .    2.855      0.346       0.312    139   100.0   139     ERRCA  
     SHIFTED CHAIN . . . . .    3.021      0.302       0.245    152   100.0   152     ERRCA  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRCA  
     SECONDARY STRUCTURE . .    2.966      0.367       0.345    102   100.0   102     ERRCA  
     LARGE SHIFTS/INSERTIONS    4.880      0.364       0.208     60   100.0    60     ERRCA  
     SURFACE . . . . . . . .    2.993      0.299       0.238    104   100.0   104     ERRCA  
     BURIED  . . . . . . . .    3.146      0.388       0.366     86   100.0    86     ERRCA  
     CORE  . . . . . . . . .    2.223      0.328       0.336    130   100.0   130     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    2.708      0.340       0.299    671    71.8   935     ERRMC  
     WELL ORDERED  . . . . .    2.734      0.343       0.302    663    72.3   917     ERRMC  
     NO INTER CONTACTS . . .    2.608      0.345       0.308    510    74.7   683     ERRMC  
     SHIFTED CHAIN . . . . .    2.616      0.296       0.239    510    68.4   746     ERRMC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRMC  
     SECONDARY STRUCTURE . .    2.499      0.362       0.348    398    78.7   506     ERRMC  
     LARGE SHIFTS/INSERTIONS    4.830      0.377       0.201    171    58.4   293     ERRMC  
     SURFACE . . . . . . . .    2.819      0.312       0.250    349    68.2   512     ERRMC  
     BURIED  . . . . . . . .    2.588      0.370       0.353    322    76.1   423     ERRMC  
     CORE  . . . . . . . . .    1.982      0.327       0.333    500    77.9   642     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    1.710      0.287       0.234    195    26.5   735     ERRSC  
     WELL ORDERED  . . . . .    1.680      0.285       0.234    193    29.6   651     ERRSC  
     NO INTER CONTACTS . . .    1.632      0.290       0.239    175    31.9   549     ERRSC  
     RELIABLE SIDE CHAINS  .    1.452      0.283       0.237    171    27.4   625     ERRSC  
     CHANGED ANGLES  . . . .    3.156      0.386       0.238     44    12.0   368     ERRSC  
     SHIFTED CHAIN . . . . .    2.024      0.292       0.206    114    20.5   557     ERRSC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRSC  
     SECONDARY STRUCTURE . .    1.279      0.270       0.245    130    30.5   426     ERRSC  
     LARGE SHIFTS/INSERTIONS    6.998      0.565       0.282     20    10.2   196     ERRSC  
     SURFACE . . . . . . . .    3.309      0.361       0.217     52    14.1   368     ERRSC  
     BURIED  . . . . . . . .    1.128      0.261       0.241    143    39.0   367     ERRSC  
     CORE  . . . . . . . . .    1.105      0.256       0.229    175    32.5   539     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    2.511      0.330       0.287    826    55.3  1495     ERRALL 
     WELL ORDERED  . . . . .    2.525      0.332       0.290    816    58.4  1398     ERRALL 
     NO INTER CONTACTS . . .    2.390      0.334       0.293    650    58.8  1105     ERRALL 
     SHIFTED CHAIN . . . . .    2.532      0.297       0.236    599    51.4  1165     ERRALL 
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRALL 
     SECONDARY STRUCTURE . .    2.237      0.342       0.326    502    60.2   834     ERRALL 
     LARGE SHIFTS/INSERTIONS    5.009      0.392       0.207    185    42.4   436     ERRALL 
     SURFACE . . . . . . . .    2.873      0.318       0.247    387    49.4   784     ERRALL 
     BURIED  . . . . . . . .    2.191      0.341       0.323    439    61.7   711     ERRALL 
     CORE  . . . . . . . . .    1.790      0.312       0.310    641    60.5  1059     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        39       103       129       147       160     190     190   DISTCA 
CA  (P)     20.53     54.21     67.89     77.37     84.21             190   DISTCA 
CA  (RMS)    0.74      1.26      1.60      2.01      2.78                   DISTCA 
 
ALL (N)       233       533       620       690       735     826    1495   DISTALL 
ALL (P)     15.59     35.65     41.47     46.15     49.16            1495   DISTALL 
ALL (RMS)    0.73      1.21      1.45      1.84      2.48                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         130           130            60          RMSLSI 
CA  (P)       68.42         68.42         31.58          RMSLSI 
CA  (RMS)      1.44          5.51          9.13          RMSLSI 
 
 
 
END of the results output 
