 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0082.inter 
# 
NUMBER-OF-PARENTS      1 
ALIGNMENT-DALI(1)      ../PARENTS/casp3.T0082.1bol.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 1495 atoms, MODEL 891 atoms, 891 common with TARGET 
           Number of atoms possible to evaluate: 644 
 
 
 CA-RMS TARGET<->PARENT(1bol)	 2.220320 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    95.33           35.8   316    83.6   378     ARMSMC  
     WELL ORDERED  . . . . .    95.11           35.9   309    83.3   371     ARMSMC  
     NO INTER CONTACTS . . .    95.53           35.4   223    80.8   276     ARMSMC  
     SHIFTED CHAIN . . . . .    96.51           34.9   261    86.4   302     ARMSMC  
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSMC  
     SECONDARY STRUCTURE . .    96.64           40.2   164    80.4   204     ARMSMC  
     LARGE SHIFTS/INSERTIONS   105.29           26.8    97    80.8   120     ARMSMC  
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSMC  
     SURFACE . . . . . . . .    98.05           34.6   182    87.5   208     ARMSMC  
     BURIED  . . . . . . . .    91.50           37.3   134    78.8   170     ARMSMC  
     CORE  . . . . . . . . .    90.57           39.7   219    84.9   258     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   162     ARMSSC1 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   148     ARMSSC1 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   119     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   154     ARMSSC1 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    93     ARMSSC1 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0   127     ARMSSC1 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    89     ARMSSC1 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    51     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    88     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    74     ARMSSC1 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0   111     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   115     ARMSSC2 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   101     ARMSSC2 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    86     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    87     ARMSSC2 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    80     ARMSSC2 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    88     ARMSSC2 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    67     ARMSSC2 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    30     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    59     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    56     ARMSSC2 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    85     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    36     ARMSSC3 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    19     ARMSSC3 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    22     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    22     ARMSSC3 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    33     ARMSSC3 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    29     ARMSSC3 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    24     ARMSSC3 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    10     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    26     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    10     ARMSSC3 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    26     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    19     ARMSSC4 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0     9     ARMSSC4 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    11     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    19     ARMSSC4 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    18     ARMSSC4 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    17     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    12     ARMSSC4 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0     6     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    16     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     3     ARMSSC4 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    13     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =  -0.63654     r(1,2) =   0.74707     r(1,3) =   0.19158 
 r(2,1) =  -0.60654     r(2,2) =  -0.63834     r(2,3) =   0.47395 
 r(3,1) =   0.47637     r(3,2) =   0.18548     r(3,3) =   0.85946 
THE OFFSET VECTOR: 
 v(1) =  46.92052     v(2) =  -1.38157     v(3) =   3.13009 
 
 Number of iteration 26                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.81           (Number of atoms:    7) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   26.59        161    84.7   190     CRMSCA  
     CRN = ALL/NP  . . . . .    0.1652                            CRMSCA  
     WELL ORDERED  . . . . .   25.99        158    84.5   187     CRMSCA  
     NO INTER CONTACTS . . .   27.51        114    82.0   139     CRMSCA  
     SHIFTED CHAIN . . . . .   26.64        133    87.5   152     CRMSCA  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSCA  
     SECONDARY STRUCTURE . .   25.92         83    81.4   102     CRMSCA  
     SHIFTED SS UNITS  . . .   25.13         53    98.1    54     CRMSCA  
     LARGE SHIFTS/INSERTIONS   32.20         49    81.7    60     CRMSCA  
     SURFACE . . . . . . . .   28.51         92    88.5   104     CRMSCA  
     BURIED  . . . . . . . .   23.79         69    80.2    86     CRMSCA  
     CORE  . . . . . . . . .   23.72        112    86.2   130     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   26.51        644    68.9   935     CRMSMC  
     WELL ORDERED  . . . . .   25.88        631    68.8   917     CRMSMC  
     NO INTER CONTACTS . . .   27.45        456    66.8   683     CRMSMC  
     SHIFTED CHAIN . . . . .   26.58        532    71.3   746     CRMSMC  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSMC  
     SECONDARY STRUCTURE . .   25.88        332    65.6   506     CRMSMC  
     SHIFTED SS UNITS  . . .   25.00        212    79.4   267     CRMSMC  
     LARGE SHIFTS/INSERTIONS   32.15        196    66.9   293     CRMSMC  
     SURFACE . . . . . . . .   28.33        368    71.9   512     CRMSMC  
     BURIED  . . . . . . . .   23.88        276    65.2   423     CRMSMC  
     CORE  . . . . . . . . .   23.62        448    69.8   642     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    0.00          0     0.0   735     CRMSSC  
     WELL ORDERED  . . . . .    0.00          0     0.0   651     CRMSSC  
     NO INTER CONTACTS . . .    0.00          0     0.0   549     CRMSSC  
     RELIABLE SIDE CHAINS  .    0.00          0     0.0   625     CRMSSC  
     CHANGED ANGLES  . . . .    0.00          0     0.0   368     CRMSSC  
     SECONDARY STRUCTURE . .    0.00          0     0.0   426     CRMSSC  
     LARGE SHIFTS/INSERTIONS    0.00          0     0.0   196     CRMSSC  
     SURFACE . . . . . . . .    0.00          0     0.0   368     CRMSSC  
     BURIED  . . . . . . . .    0.00          0     0.0   367     CRMSSC  
     CORE  . . . . . . . . .    0.00          0     0.0   539     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   26.51        644    43.1  1495     CRMSALL 
     WELL ORDERED  . . . . .   25.88        631    45.1  1398     CRMSALL 
     NO INTER CONTACTS . . .   27.45        456    41.3  1105     CRMSALL 
     SHIFTED CHAIN . . . . .   26.58        532    45.7  1165     CRMSALL 
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSALL 
     SECONDARY STRUCTURE . .   25.88        332    39.8   834     CRMSALL 
     LARGE SHIFTS/INSERTIONS   32.15        196    45.0   436     CRMSALL 
     SURFACE . . . . . . . .   28.33        368    46.9   784     CRMSALL 
     BURIED  . . . . . . . .   23.88        276    38.8   711     CRMSALL 
     CORE  . . . . . . . . .   23.62        448    42.3  1059     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1    26.51     14    77.8    18      13-AVCSFQKSGSCPGSGLRT-30   
 CA  LOOP  2    43.96     18   100.0    18      43-TSLTNCPGSPFDITKISH-60   
 CA  LOOP  3    10.16      5   100.0     5      93-ESTFN-97   
 CA  LOOP  4    16.76      3   100.0     3     127-GRT-129  
 CA  LOOP  5     0.00      0     0.0     7     153-TDPQTKV-159  
 CA  LOOP  6    10.63      3   100.0     3     171-QDG-173  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1    26.42     56    64.4    87      13-AVCSFQKSGSCPGSGLRT-30   
 MC  LOOP  2    43.87     72    80.9    89      43-TSLTNCPGSPFDITKISH-60   
 MC  LOOP  3     9.96     20    80.0    25      93-ESTFN-97   
 MC  LOOP  4    16.64     12    85.7    14     127-GRT-129  
 MC  LOOP  5     0.00      0     0.0    35     153-TDPQTKV-159  
 MC  LOOP  6    10.54     12    85.7    14     171-QDG-173  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1    26.42     56    45.9   122      13-AVCSFQKSGSCPGSGLRT-30   
 ALL LOOP  2    43.87     72    54.1   133      43-TSLTNCPGSPFDITKISH-60   
 ALL LOOP  3     9.96     20    48.8    41      93-ESTFN-97   
 ALL LOOP  4    16.64     12    54.5    22     127-GRT-129  
 ALL LOOP  5     0.00      0     0.0    54     153-TDPQTKV-159  
 ALL LOOP  6    10.54     12    57.1    21     171-QDG-173  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     5.27     14    77.8    18      13-AVCSFQKSGSCPGSGLRT-30   
 CA  LOOP  2     5.87     18   100.0    18      43-TSLTNCPGSPFDITKISH-60   
 CA  LOOP  3     7.27      5   100.0     5      93-ESTFN-97   
 CA  LOOP  4     0.59      3   100.0     3     127-GRT-129  
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 CA  LOOP  6     0.14      3   100.0     3     171-QDG-173  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     5.23     56    64.4    87      13-AVCSFQKSGSCPGSGLRT-30   
 MC  LOOP  2     5.78     72    80.9    89      43-TSLTNCPGSPFDITKISH-60   
 MC  LOOP  3     7.76     20    80.0    25      93-ESTFN-97   
 MC  LOOP  4     1.48     12    85.7    14     127-GRT-129  
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 MC  LOOP  6     1.18     12    85.7    14     171-QDG-173  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     5.23     56    45.9   122      13-AVCSFQKSGSCPGSGLRT-30   
 ALL LOOP  2     5.78     72    54.1   133      43-TSLTNCPGSPFDITKISH-60   
 ALL LOOP  3     7.76     20    48.8    41      93-ESTFN-97   
 ALL LOOP  4     1.48     12    54.5    22     127-GRT-129  
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 ALL LOOP  6     1.18     12    57.1    21     171-QDG-173  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   23.396      1.000       0.500    161    84.7   190     ERRCA  
     WELL ORDERED  . . . . .   22.920      1.000       0.500    158    84.5   187     ERRCA  
     NO INTER CONTACTS . . .   24.126      1.000       0.500    114    82.0   139     ERRCA  
     SHIFTED CHAIN . . . . .   23.313      1.000       0.500    133    87.5   152     ERRCA  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRCA  
     SECONDARY STRUCTURE . .   23.136      1.000       0.500     83    81.4   102     ERRCA  
     LARGE SHIFTS/INSERTIONS   29.067      1.000       0.500     49    81.7    60     ERRCA  
     SURFACE . . . . . . . .   25.424      1.000       0.500     92    88.5   104     ERRCA  
     BURIED  . . . . . . . .   20.692      1.000       0.500     69    80.2    86     ERRCA  
     CORE  . . . . . . . . .   20.915      1.000       0.500    112    86.2   130     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   23.340      1.000       0.500    644    68.9   935     ERRMC  
     WELL ORDERED  . . . . .   22.843      1.000       0.500    631    68.8   917     ERRMC  
     NO INTER CONTACTS . . .   24.083      1.000       0.500    456    66.8   683     ERRMC  
     SHIFTED CHAIN . . . . .   23.264      1.000       0.500    532    71.3   746     ERRMC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRMC  
     SECONDARY STRUCTURE . .   23.120      1.000       0.500    332    65.6   506     ERRMC  
     LARGE SHIFTS/INSERTIONS   29.046      1.000       0.500    196    66.9   293     ERRMC  
     SURFACE . . . . . . . .   25.257      1.000       0.500    368    71.9   512     ERRMC  
     BURIED  . . . . . . . .   20.784      1.000       0.500    276    65.2   423     ERRMC  
     CORE  . . . . . . . . .   20.844      1.000       0.500    448    69.8   642     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.000      0.000       0.000      0     0.0   735     ERRSC  
     WELL ORDERED  . . . . .    0.000      0.000       0.000      0     0.0   651     ERRSC  
     NO INTER CONTACTS . . .    0.000      0.000       0.000      0     0.0   549     ERRSC  
     RELIABLE SIDE CHAINS  .    0.000      0.000       0.000      0     0.0   625     ERRSC  
     CHANGED ANGLES  . . . .    0.000      0.000       0.000      0     0.0   368     ERRSC  
     SHIFTED CHAIN . . . . .    0.000      0.000       0.000      0     0.0   557     ERRSC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRSC  
     SECONDARY STRUCTURE . .    0.000      0.000       0.000      0     0.0   426     ERRSC  
     LARGE SHIFTS/INSERTIONS    0.000      0.000       0.000      0     0.0   196     ERRSC  
     SURFACE . . . . . . . .    0.000      0.000       0.000      0     0.0   368     ERRSC  
     BURIED  . . . . . . . .    0.000      0.000       0.000      0     0.0   367     ERRSC  
     CORE  . . . . . . . . .    0.000      0.000       0.000      0     0.0   539     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   23.340      1.000       0.500    644    43.1  1495     ERRALL 
     WELL ORDERED  . . . . .   22.843      1.000       0.500    631    45.1  1398     ERRALL 
     NO INTER CONTACTS . . .   24.083      1.000       0.500    456    41.3  1105     ERRALL 
     SHIFTED CHAIN . . . . .   23.264      1.000       0.500    532    45.7  1165     ERRALL 
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRALL 
     SECONDARY STRUCTURE . .   23.120      1.000       0.500    332    39.8   834     ERRALL 
     LARGE SHIFTS/INSERTIONS   29.046      1.000       0.500    196    45.0   436     ERRALL 
     SURFACE . . . . . . . .   25.257      1.000       0.500    368    46.9   784     ERRALL 
     BURIED  . . . . . . . .   20.784      1.000       0.500    276    38.8   711     ERRALL 
     CORE  . . . . . . . . .   20.844      1.000       0.500    448    42.3  1059     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         1         4         7        10        27     161     190   DISTCA 
CA  (P)      0.53      2.11      3.68      5.26     14.21             190   DISTCA 
CA  (RMS)    0.92      1.40      1.81      2.97      6.41                   DISTCA 
 
ALL (N)         2        12        22        40       106     644    1495   DISTALL 
ALL (P)      0.13      0.80      1.47      2.68      7.09            1495   DISTALL 
ALL (RMS)    0.95      1.51      2.00      3.07      6.39                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         130           112            49          RMSLSI 
CA  (P)       68.42         58.95         25.79          RMSLSI 
CA  (RMS)      1.44         23.72         32.20          RMSLSI 
 
 
 
END of the results output 
