 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0068.inter 
# 
NUMBER-OF-PARENTS      1 
ALIGNMENT-DALI(1)      ../PARENTS/casp3.T0068.1rmg.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 2812 atoms, MODEL 1655 atoms, 1655 common with TARGET 
           Number of atoms possible to evaluate: 1348 
 
 
 CA-RMS TARGET<->PARENT(1rmg)	 2.240128 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    61.43           64.9   656    87.5   750     ARMSMC  
     WELL ORDERED  . . . . .    57.59           67.1   584    86.6   674     ARMSMC  
     NO INTER CONTACTS . . .    60.40           66.4   598    90.9   658     ARMSMC  
     SHIFTED CHAIN . . . . .    67.19           60.7   496    85.2   582     ARMSMC  
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSMC  
     SECONDARY STRUCTURE . .    49.00           75.0   364    96.8   376     ARMSMC  
     LARGE SHIFTS/INSERTIONS    86.83           43.0   193    75.7   255     ARMSMC  
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSMC  
     SURFACE . . . . . . . .    70.34           57.9   297    83.4   356     ARMSMC  
     BURIED  . . . . . . . .    52.94           70.8   359    91.1   394     ARMSMC  
     CORE  . . . . . . . . .    46.95           74.1   463    93.5   495     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   321     ARMSSC1 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   287     ARMSSC1 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   276     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   285     ARMSSC1 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0   220     ARMSSC1 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0   246     ARMSSC1 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   171     ARMSSC1 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0   102     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   166     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   155     ARMSSC1 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0   219     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   205     ARMSSC2 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   179     ARMSSC2 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   175     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   151     ARMSSC2 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0   166     ARMSSC2 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0   156     ARMSSC2 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   113     ARMSSC2 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    67     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   111     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    94     ARMSSC2 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0   138     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    70     ARMSSC3 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    50     ARMSSC3 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    51     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    63     ARMSSC3 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    68     ARMSSC3 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    62     ARMSSC3 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    34     ARMSSC3 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    36     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    58     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    12     ARMSSC3 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    34     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    47     ARMSSC4 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    33     ARMSSC4 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    32     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    47     ARMSSC4 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    45     ARMSSC4 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    40     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    23     ARMSSC4 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    24     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    44     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     3     ARMSSC4 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    23     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =   0.44041     r(1,2) =  -0.73965     r(1,3) =   0.50888 
 r(2,1) =  -0.61005     r(2,2) =   0.16932     r(2,3) =   0.77406 
 r(3,1) =  -0.65870     r(3,2) =  -0.65134     r(3,3) =  -0.37666 
THE OFFSET VECTOR: 
 v(1) =  29.70521     v(2) = -60.26725     v(3) = 187.88887 
 
 Number of iteration 31                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.10           (Number of atoms:  178) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   10.36        337    89.6   376     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0307                            CRMSCA  
     WELL ORDERED  . . . . .   10.67        300    88.8   338     CRMSCA  
     NO INTER CONTACTS . . .   10.11        306    93.0   329     CRMSCA  
     SHIFTED CHAIN . . . . .   11.67        255    87.3   292     CRMSCA  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSCA  
     SECONDARY STRUCTURE . .    7.47        184    97.9   188     CRMSCA  
     SHIFTED SS UNITS  . . .    9.05         64    97.0    66     CRMSCA  
     LARGE SHIFTS/INSERTIONS   15.87        100    78.1   128     CRMSCA  
     SURFACE . . . . . . . .   12.84        153    85.5   179     CRMSCA  
     BURIED  . . . . . . . .    7.72        184    93.4   197     CRMSCA  
     CORE  . . . . . . . . .    6.81        237    95.6   248     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   10.37       1348    72.9  1849     CRMSMC  
     WELL ORDERED  . . . . .   10.65       1207    72.4  1667     CRMSMC  
     NO INTER CONTACTS . . .   10.10       1224    75.8  1615     CRMSMC  
     SHIFTED CHAIN . . . . .   11.68       1020    71.1  1435     CRMSMC  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSMC  
     SECONDARY STRUCTURE . .    7.47        736    78.7   935     CRMSMC  
     SHIFTED SS UNITS  . . .    8.97        256    77.8   329     CRMSMC  
     LARGE SHIFTS/INSERTIONS   15.92        400    63.8   627     CRMSMC  
     SURFACE . . . . . . . .   12.76        612    69.0   887     CRMSMC  
     BURIED  . . . . . . . .    7.84        736    76.5   962     CRMSMC  
     CORE  . . . . . . . . .    6.77        948    77.6  1222     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    0.00          0     0.0  1308     CRMSSC  
     WELL ORDERED  . . . . .    0.00          0     0.0  1158     CRMSSC  
     NO INTER CONTACTS . . .    0.00          0     0.0  1116     CRMSSC  
     RELIABLE SIDE CHAINS  .    0.00          0     0.0  1108     CRMSSC  
     CHANGED ANGLES  . . . .    0.00          0     0.0   771     CRMSSC  
     SECONDARY STRUCTURE . .    0.00          0     0.0   715     CRMSSC  
     LARGE SHIFTS/INSERTIONS    0.00          0     0.0   424     CRMSSC  
     SURFACE . . . . . . . .    0.00          0     0.0   679     CRMSSC  
     BURIED  . . . . . . . .    0.00          0     0.0   629     CRMSSC  
     CORE  . . . . . . . . .    0.00          0     0.0   884     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   10.37       1348    47.9  2812     CRMSALL 
     WELL ORDERED  . . . . .   10.65       1207    48.0  2516     CRMSALL 
     NO INTER CONTACTS . . .   10.10       1224    50.3  2432     CRMSALL 
     SHIFTED CHAIN . . . . .   11.68       1020    47.1  2167     CRMSALL 
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSALL 
     SECONDARY STRUCTURE . .    7.47        736    50.2  1467     CRMSALL 
     LARGE SHIFTS/INSERTIONS   15.92        400    42.7   936     CRMSALL 
     SURFACE . . . . . . . .   12.76        612    43.9  1395     CRMSALL 
     BURIED  . . . . . . . .    7.84        736    51.9  1417     CRMSALL 
     CORE  . . . . . . . . .    6.77        948    50.5  1876     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1    24.14     11    68.8    16       5-TVSEPKTPSSCTTLKA-20   
 CA  LOOP  2    22.18      5   100.0     5      37-DQGKA-41   
 CA  LOOP  3    17.72      4   100.0     4      46-AGST-49   
 CA  LOOP  4     5.95      2    50.0     4      59-LPSG-62   
 CA  LOOP  5    22.48     24   100.0    24      77-NNAKSFENAPSSCGVVDKNGKGCD-100  
 CA  LOOP  6     9.72     10    38.5    26     125-VKLQDKKVSWWELAADAKVKKLKQNT-150  
 CA  LOOP  7     4.21      2    66.7     3     197-TAR-199  
 CA  LOOP  8     9.12      2    33.3     6     231-YKGRAE-236  
 CA  LOOP  9     4.36      4   100.0     4     286-SAAG-289  
 CA  LOOP 10     5.64      6   100.0     6     316-KKEGSN-321  
 CA  LOOP 11     9.28      6   100.0     6     336-ETKGVV-341  
 CA  LOOP 12     6.47      8   100.0     8     346-ENAKKPIE-353  
 CA  LOOP 13     7.99      3   100.0     3     363-SDS-365  
 CA  LOOP 14     7.17      4   100.0     4     373-NVKK-376  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1    24.29     44    55.0    80       5-TVSEPKTPSSCTTLKA-20   
 MC  LOOP  2    22.29     20    83.3    24      37-DQGKA-41   
 MC  LOOP  3    18.14     16    84.2    19      46-AGST-49   
 MC  LOOP  4     5.79      8    42.1    19      59-LPSG-62   
 MC  LOOP  5    22.52     96    82.1   117      77-NNAKSFENAPSSCGVVDKNGKGCD-100  
 MC  LOOP  6     9.98     40    30.8   130     125-VKLQDKKVSWWELAADAKVKKLKQNT-150  
 MC  LOOP  7     3.71      8    53.3    15     197-TAR-199  
 MC  LOOP  8     9.49      8    27.6    29     231-YKGRAE-236  
 MC  LOOP  9     4.39     16    84.2    19     286-SAAG-289  
 MC  LOOP 10     5.33     24    82.8    29     316-KKEGSN-321  
 MC  LOOP 11     8.97     24    82.8    29     336-ETKGVV-341  
 MC  LOOP 12     6.44     32    80.0    40     346-ENAKKPIE-353  
 MC  LOOP 13     7.40     12    80.0    15     363-SDS-365  
 MC  LOOP 14     7.20     16    80.0    20     373-NVKK-376  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1    24.29     44    38.9   113       5-TVSEPKTPSSCTTLKA-20   
 ALL LOOP  2    22.29     20    57.1    35      37-DQGKA-41   
 ALL LOOP  3    18.14     16    72.7    22      46-AGST-49   
 ALL LOOP  4     5.79      8    32.0    25      59-LPSG-62   
 ALL LOOP  5    22.52     96    57.1   168      77-NNAKSFENAPSSCGVVDKNGKGCD-100  
 ALL LOOP  6     9.98     40    18.6   215     125-VKLQDKKVSWWELAADAKVKKLKQNT-150  
 ALL LOOP  7     3.71      8    34.8    23     197-TAR-199  
 ALL LOOP  8     9.49      8    16.0    50     231-YKGRAE-236  
 ALL LOOP  9     4.39     16    80.0    20     286-SAAG-289  
 ALL LOOP 10     5.33     24    53.3    45     316-KKEGSN-321  
 ALL LOOP 11     8.97     24    55.8    43     336-ETKGVV-341  
 ALL LOOP 12     6.44     32    50.0    64     346-ENAKKPIE-353  
 ALL LOOP 13     7.40     12    60.0    20     363-SDS-365  
 ALL LOOP 14     7.20     16    48.5    33     373-NVKK-376  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     3.65     11    68.8    16       5-TVSEPKTPSSCTTLKA-20   
 CA  LOOP  2     1.89      5   100.0     5      37-DQGKA-41   
 CA  LOOP  3     1.14      4   100.0     4      46-AGST-49   
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 CA  LOOP  5    10.34     24   100.0    24      77-NNAKSFENAPSSCGVVDKNGKGCD-100  
 CA  LOOP  6     4.17     10    38.5    26     125-VKLQDKKVSWWELAADAKVKKLKQNT-150  
 WARNING! LOOP  7 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  8 cannot be considered (not enough atoms). 
 
 CA  LOOP  9     1.30      4   100.0     4     286-SAAG-289  
 CA  LOOP 10     2.15      6   100.0     6     316-KKEGSN-321  
 CA  LOOP 11     1.91      6   100.0     6     336-ETKGVV-341  
 CA  LOOP 12     3.31      8   100.0     8     346-ENAKKPIE-353  
 CA  LOOP 13     0.69      3   100.0     3     363-SDS-365  
 CA  LOOP 14     0.33      4   100.0     4     373-NVKK-376  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     3.67     44    55.0    80       5-TVSEPKTPSSCTTLKA-20   
 MC  LOOP  2     2.31     20    83.3    24      37-DQGKA-41   
 MC  LOOP  3     1.93     16    84.2    19      46-AGST-49   
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 MC  LOOP  5    10.19     96    82.1   117      77-NNAKSFENAPSSCGVVDKNGKGCD-100  
 MC  LOOP  6     4.09     40    30.8   130     125-VKLQDKKVSWWELAADAKVKKLKQNT-150  
 WARNING! LOOP  7 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  8 cannot be considered (not enough atoms). 
 
 MC  LOOP  9     1.91     16    84.2    19     286-SAAG-289  
 MC  LOOP 10     1.99     24    82.8    29     316-KKEGSN-321  
 MC  LOOP 11     2.08     24    82.8    29     336-ETKGVV-341  
 MC  LOOP 12     3.17     32    80.0    40     346-ENAKKPIE-353  
 MC  LOOP 13     2.25     12    80.0    15     363-SDS-365  
 MC  LOOP 14     1.17     16    80.0    20     373-NVKK-376  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     3.67     44    38.9   113       5-TVSEPKTPSSCTTLKA-20   
 ALL LOOP  2     2.31     20    57.1    35      37-DQGKA-41   
 ALL LOOP  3     1.93     16    72.7    22      46-AGST-49   
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 ALL LOOP  5    10.19     96    57.1   168      77-NNAKSFENAPSSCGVVDKNGKGCD-100  
 ALL LOOP  6     4.09     40    18.6   215     125-VKLQDKKVSWWELAADAKVKKLKQNT-150  
 WARNING! LOOP  7 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  8 cannot be considered (not enough atoms). 
 
 ALL LOOP  9     1.91     16    80.0    20     286-SAAG-289  
 ALL LOOP 10     1.99     24    53.3    45     316-KKEGSN-321  
 ALL LOOP 11     2.08     24    55.8    43     336-ETKGVV-341  
 ALL LOOP 12     3.17     32    50.0    64     346-ENAKKPIE-353  
 ALL LOOP 13     2.25     12    60.0    20     363-SDS-365  
 ALL LOOP 14     1.17     16    48.5    33     373-NVKK-376  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    6.373      1.000       0.500    337    89.6   376     ERRCA  
     WELL ORDERED  . . . . .    6.313      1.000       0.500    300    88.8   338     ERRCA  
     NO INTER CONTACTS . . .    5.988      1.000       0.500    306    93.0   329     ERRCA  
     SHIFTED CHAIN . . . . .    7.846      1.000       0.500    255    87.3   292     ERRCA  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRCA  
     SECONDARY STRUCTURE . .    4.304      1.000       0.500    184    97.9   188     ERRCA  
     LARGE SHIFTS/INSERTIONS   12.899      1.000       0.500    100    78.1   128     ERRCA  
     SURFACE . . . . . . . .    8.920      1.000       0.500    153    85.5   179     ERRCA  
     BURIED  . . . . . . . .    4.255      1.000       0.500    184    93.4   197     ERRCA  
     CORE  . . . . . . . . .    3.619      1.000       0.500    237    95.6   248     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    6.370      1.000       0.500   1348    72.9  1849     ERRMC  
     WELL ORDERED  . . . . .    6.305      1.000       0.500   1207    72.4  1667     ERRMC  
     NO INTER CONTACTS . . .    5.985      1.000       0.500   1224    75.8  1615     ERRMC  
     SHIFTED CHAIN . . . . .    7.835      1.000       0.500   1020    71.1  1435     ERRMC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRMC  
     SECONDARY STRUCTURE . .    4.317      1.000       0.500    736    78.7   935     ERRMC  
     LARGE SHIFTS/INSERTIONS   12.867      1.000       0.500    400    63.8   627     ERRMC  
     SURFACE . . . . . . . .    8.853      1.000       0.500    612    69.0   887     ERRMC  
     BURIED  . . . . . . . .    4.305      1.000       0.500    736    76.5   962     ERRMC  
     CORE  . . . . . . . . .    3.628      1.000       0.500    948    77.6  1222     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.000      0.000       0.000      0     0.0  1308     ERRSC  
     WELL ORDERED  . . . . .    0.000      0.000       0.000      0     0.0  1158     ERRSC  
     NO INTER CONTACTS . . .    0.000      0.000       0.000      0     0.0  1116     ERRSC  
     RELIABLE SIDE CHAINS  .    0.000      0.000       0.000      0     0.0  1108     ERRSC  
     CHANGED ANGLES  . . . .    0.000      0.000       0.000      0     0.0   771     ERRSC  
     SHIFTED CHAIN . . . . .    0.000      0.000       0.000      0     0.0   999     ERRSC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRSC  
     SECONDARY STRUCTURE . .    0.000      0.000       0.000      0     0.0   715     ERRSC  
     LARGE SHIFTS/INSERTIONS    0.000      0.000       0.000      0     0.0   424     ERRSC  
     SURFACE . . . . . . . .    0.000      0.000       0.000      0     0.0   679     ERRSC  
     BURIED  . . . . . . . .    0.000      0.000       0.000      0     0.0   629     ERRSC  
     CORE  . . . . . . . . .    0.000      0.000       0.000      0     0.0   884     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    6.370      1.000       0.500   1348    47.9  2812     ERRALL 
     WELL ORDERED  . . . . .    6.305      1.000       0.500   1207    48.0  2516     ERRALL 
     NO INTER CONTACTS . . .    5.985      1.000       0.500   1224    50.3  2432     ERRALL 
     SHIFTED CHAIN . . . . .    7.835      1.000       0.500   1020    47.1  2167     ERRALL 
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRALL 
     SECONDARY STRUCTURE . .    4.317      1.000       0.500    736    50.2  1467     ERRALL 
     LARGE SHIFTS/INSERTIONS   12.867      1.000       0.500    400    42.7   936     ERRALL 
     SURFACE . . . . . . . .    8.853      1.000       0.500    612    43.9  1395     ERRALL 
     BURIED  . . . . . . . .    4.305      1.000       0.500    736    51.9  1417     ERRALL 
     CORE  . . . . . . . . .    3.628      1.000       0.500    948    50.5  1876     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)       108       169       187       200       267     337     376   DISTCA 
CA  (P)     28.72     44.95     49.73     53.19     71.01             376   DISTCA 
CA  (RMS)    0.74      1.01      1.22      1.57      3.72                   DISTCA 
 
ALL (N)       437       676       743       810      1064    1348    2812   DISTALL 
ALL (P)     15.54     24.04     26.42     28.81     37.84            2812   DISTALL 
ALL (RMS)    0.74      1.02      1.21      1.66      3.66                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         248           237           100          RMSLSI 
CA  (P)       65.96         63.03         26.60          RMSLSI 
CA  (RMS)      1.37          6.81         15.87          RMSLSI 
 
 
 
END of the results output 
