 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0062.inter 
CONANA-PAIR            ../CONANA/T0062.pair 
# 
NUMBER-OF-PARENTS      6 
ALIGNMENT-DALI(1)      ../PARENTS/casp3.T0062.2cnd.rot 
ALIGNMENT-DALI(2)      ../PARENTS/casp3.T0062.1ndh.rot 
ALIGNMENT-DALI(3)      ../PARENTS/casp3.T0062.1fdr.rot 
ALIGNMENT-DALI(4)      ../PARENTS/casp3.T0062.1amo_A.rot 
ALIGNMENT-DALI(5)      ../PARENTS/casp3.T0062.1fnc.rot 
ALIGNMENT-DALI(6)      ../PARENTS/casp3.T0062.2pia.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 1793 atoms, MODEL 1838 atoms, 1793 common with TARGET 
           Number of atoms possible to evaluate: 1708 
 
 
 CA-RMS TARGET<->PARENT(2cnd)	 2.429767 
 
 CA-RMS TARGET<->PARENT(1ndh)	 2.615694 
 
 CA-RMS TARGET<->PARENT(1fdr)	 3.203933 
 
 CA-RMS TARGET<->PARENT(1amo_A)	 2.678109 
 
 CA-RMS TARGET<->PARENT(1fnc)	 2.402750 
 
 CA-RMS TARGET<->PARENT(2pia)	 2.791516 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    56.56           67.6   404    90.4   447     ARMSMC  
     WELL ORDERED  . . . . .    52.94           69.0   339    89.9   377     ARMSMC  
     NO INTER CONTACTS . . .    53.85           69.3   348    89.0   391     ARMSMC  
     SHIFTED CHAIN . . . . .    56.35           68.5   337    88.7   380     ARMSMC  
     ALTERNATIVE PARENT  . .    61.37           68.9   164    91.1   180     ARMSMC  
     SECONDARY STRUCTURE . .    53.96           72.3   231    94.7   244     ARMSMC  
     LARGE SHIFTS/INSERTIONS    68.83           61.8   110    81.5   135     ARMSMC  
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSMC  
     SURFACE . . . . . . . .    61.13           66.5   203    89.0   228     ARMSMC  
     BURIED  . . . . . . . .    51.53           68.7   201    91.8   219     ARMSMC  
     CORE  . . . . . . . . .    51.21           69.7   294    94.2   312     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    91.11           37.2   148    90.8   163     ARMSSC1 
     WELL ORDERED  . . . . .    88.66           43.6    94    88.7   106     ARMSSC1 
     NO INTER CONTACTS . . .    91.04           37.3   126    89.4   141     ARMSSC1 
     RELIABLE SIDE CHAINS  .    91.21           37.5   136    90.7   150     ARMSSC1 
     CHANGED ANGLES  . . . .    94.14           32.3    96    88.1   109     ARMSSC1 
     SHIFTED CHAIN . . . . .    90.04           38.5   122    89.1   137     ARMSSC1 
     ALTERNATIVE PARENT  . .    92.58           32.2    59    89.4    66     ARMSSC1 
     SECONDARY STRUCTURE . .    88.69           40.7    91    95.8    95     ARMSSC1 
     LARGE SHIFTS/INSERTIONS    85.47           41.5    41    80.4    51     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .    92.77           33.3    78    87.6    89     ARMSSC1 
     BURIED  . . . . . . . .    89.24           41.4    70    94.6    74     ARMSSC1 
     CORE  . . . . . . . . .    93.19           35.5   107    95.5   112     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    81.57           45.0   100    87.7   114     ARMSSC2 
     WELL ORDERED  . . . . .    83.78           50.0    60    87.0    69     ARMSSC2 
     NO INTER CONTACTS . . .    79.15           46.5    86    86.0   100     ARMSSC2 
     RELIABLE SIDE CHAINS  .    82.04           45.0    80    87.0    92     ARMSSC2 
     CHANGED ANGLES  . . . .    79.99           44.9    78    85.7    91     ARMSSC2 
     SHIFTED CHAIN . . . . .    80.18           45.8    83    85.6    97     ARMSSC2 
     ALTERNATIVE PARENT  . .    80.86           42.1    38    84.4    45     ARMSSC2 
     SECONDARY STRUCTURE . .    87.23           42.4    59    95.2    62     ARMSSC2 
     LARGE SHIFTS/INSERTIONS    66.09           53.6    28    73.7    38     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .    81.17           41.2    51    82.3    62     ARMSSC2 
     BURIED  . . . . . . . .    81.97           49.0    49    94.2    52     ARMSSC2 
     CORE  . . . . . . . . .    86.84           41.7    72    94.7    76     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    90.33           25.0    28    87.5    32     ARMSSC3 
     WELL ORDERED  . . . . .    95.11           30.8    13    81.2    16     ARMSSC3 
     NO INTER CONTACTS . . .    88.88           25.9    27    87.1    31     ARMSSC3 
     RELIABLE SIDE CHAINS  .    90.45           25.0    24    88.9    27     ARMSSC3 
     CHANGED ANGLES  . . . .    89.15           31.8    22   100.0    22     ARMSSC3 
     SHIFTED CHAIN . . . . .    88.02           29.2    24    85.7    28     ARMSSC3 
     ALTERNATIVE PARENT  . .    69.54           38.5    13    92.9    14     ARMSSC3 
     SECONDARY STRUCTURE . .    90.02           33.3    15    93.8    16     ARMSSC3 
     LARGE SHIFTS/INSERTIONS    74.60           25.0     8    72.7    11     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .    89.93           18.8    16    84.2    19     ARMSSC3 
     BURIED  . . . . . . . .    90.86           33.3    12    92.3    13     ARMSSC3 
     CORE  . . . . . . . . .    95.90           25.0    20    95.2    21     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    73.65           33.3     9   100.0     9     ARMSSC4 
     WELL ORDERED  . . . . .    26.86           50.0     2   100.0     2     ARMSSC4 
     NO INTER CONTACTS . . .    73.65           33.3     9   100.0     9     ARMSSC4 
     RELIABLE SIDE CHAINS  .    73.65           33.3     9   100.0     9     ARMSSC4 
     CHANGED ANGLES  . . . .    71.81           37.5     8   100.0     8     ARMSSC4 
     SHIFTED CHAIN . . . . .    77.75           25.0     8   100.0     8     ARMSSC4 
     ALTERNATIVE PARENT  . .    83.52           20.0     5   100.0     5     ARMSSC4 
     SECONDARY STRUCTURE . .    63.09           20.0     5   100.0     5     ARMSSC4 
     LARGE SHIFTS/INSERTIONS   126.34            0.0     1   100.0     1     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .    82.15           28.6     7   100.0     7     ARMSSC4 
     BURIED  . . . . . . . .    28.14           50.0     2   100.0     2     ARMSSC4 
     CORE  . . . . . . . . .    64.09           37.5     8   100.0     8     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =  -0.79341     r(1,2) =  -0.23843     r(1,3) =  -0.56005 
 r(2,1) =   0.21472     r(2,2) =  -0.97057     r(2,3) =   0.10901 
 r(3,1) =  -0.56956     r(3,2) =  -0.03376     r(3,3) =   0.82126 
THE OFFSET VECTOR: 
 v(1) =  37.32160     v(2) =  61.93952     v(3) = 104.15224 
 
 Number of iteration 63                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.42           (Number of atoms:  144) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    3.36        216    95.6   226     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0156                            CRMSCA  
     WELL ORDERED  . . . . .    3.30        182    94.8   192     CRMSCA  
     NO INTER CONTACTS . . .    3.36        188    94.9   198     CRMSCA  
     SHIFTED CHAIN . . . . .    3.50        182    94.8   192     CRMSCA  
     ALTERNATIVE PARENT  . .    3.61         83    92.2    90     CRMSCA  
     SECONDARY STRUCTURE . .    2.25        122   100.0   122     CRMSCA  
     SHIFTED SS UNITS  . . .    1.86         11   100.0    11     CRMSCA  
     LARGE SHIFTS/INSERTIONS    4.56         60    88.2    68     CRMSCA  
     SURFACE . . . . . . . .    3.47        108    93.9   115     CRMSCA  
     BURIED  . . . . . . . .    3.25        108    97.3   111     CRMSCA  
     CORE  . . . . . . . . .    2.76        156    98.7   158     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    3.43       1065    95.6  1114     CRMSMC  
     WELL ORDERED  . . . . .    3.32        902    94.9   950     CRMSMC  
     NO INTER CONTACTS . . .    3.44        927    95.0   976     CRMSMC  
     SHIFTED CHAIN . . . . .    3.54        899    94.8   948     CRMSMC  
     ALTERNATIVE PARENT  . .    3.69        410    92.1   445     CRMSMC  
     SECONDARY STRUCTURE . .    2.30        607   100.0   607     CRMSMC  
     SHIFTED SS UNITS  . . .    1.91         55   100.0    55     CRMSMC  
     LARGE SHIFTS/INSERTIONS    4.62        297    88.1   337     CRMSMC  
     SURFACE . . . . . . . .    3.56        532    93.8   567     CRMSMC  
     BURIED  . . . . . . . .    3.29        533    97.4   547     CRMSMC  
     CORE  . . . . . . . . .    2.83        768    98.8   777     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    5.05        844    94.9   889     CRMSSC  
     WELL ORDERED  . . . . .    4.92        589    94.5   623     CRMSSC  
     NO INTER CONTACTS . . .    5.06        724    94.1   769     CRMSSC  
     RELIABLE SIDE CHAINS  .    5.08        728    94.4   771     CRMSSC  
     CHANGED ANGLES  . . . .    5.15        429    92.9   462     CRMSSC  
     SECONDARY STRUCTURE . .    4.22        477   100.0   477     CRMSSC  
     LARGE SHIFTS/INSERTIONS    6.24        231    85.2   271     CRMSSC  
     SURFACE . . . . . . . .    5.57        425    91.4   465     CRMSSC  
     BURIED  . . . . . . . .    4.47        419    98.8   424     CRMSSC  
     CORE  . . . . . . . . .    4.52        613    99.2   618     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    4.26       1708    95.3  1793     CRMSALL 
     WELL ORDERED  . . . . .    4.06       1329    94.7  1403     CRMSALL 
     NO INTER CONTACTS . . .    4.26       1476    94.6  1561     CRMSALL 
     SHIFTED CHAIN . . . . .    4.41       1444    94.4  1529     CRMSALL 
     ALTERNATIVE PARENT  . .    4.64        644    91.1   707     CRMSALL 
     SECONDARY STRUCTURE . .    3.34        965   100.0   965     CRMSALL 
     LARGE SHIFTS/INSERTIONS    5.41        471    86.7   543     CRMSALL 
     SURFACE . . . . . . . .    4.61        857    92.6   925     CRMSALL 
     BURIED  . . . . . . . .    3.87        851    98.0   868     CRMSALL 
     CORE  . . . . . . . . .    3.73       1237    99.0  1250     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     3.14      3   100.0     3      26-AAF-28   
 CA  LOOP  2     3.21      7   100.0     7      52-STPDEKG-58   
 CA  LOOP  3     3.98      7   100.0     7      79-RILKDHQ-85   
 CA  LOOP  4     0.00      0     0.0     8      95-AWLRDDEE-102  
 CA  LOOP  5     4.52      4   100.0     4     128-NPNR-131  
 CA  LOOP  6     4.63     10   100.0    10     181-VLTAVLQDHG-190  
 CA  LOOP  7     3.61     12   100.0    12     204-EMAKIARDLFCS-215  
 CA  LOOP  8     8.62      5   100.0     5     228-AFAFI-232  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     3.28     15   100.0    15      26-AAF-28   
 MC  LOOP  2     3.33     34   100.0    34      52-STPDEKG-58   
 MC  LOOP  3     3.96     35   100.0    35      79-RILKDHQ-85   
 MC  LOOP  4     0.00      0     0.0    40      95-AWLRDDEE-102  
 MC  LOOP  5     4.81     20   100.0    20     128-NPNR-131  
 MC  LOOP  6     4.61     49   100.0    49     181-VLTAVLQDHG-190  
 MC  LOOP  7     3.61     60   100.0    60     204-EMAKIARDLFCS-215  
 MC  LOOP  8     8.66     25   100.0    25     228-AFAFI-232  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     3.41     21   100.0    21      26-AAF-28   
 ALL LOOP  2     4.07     50   100.0    50      52-STPDEKG-58   
 ALL LOOP  3     6.20     63   100.0    63      79-RILKDHQ-85   
 ALL LOOP  4     0.00      0     0.0    72      95-AWLRDDEE-102  
 ALL LOOP  5     5.19     34   100.0    34     128-NPNR-131  
 ALL LOOP  6     5.38     73   100.0    73     181-VLTAVLQDHG-190  
 ALL LOOP  7     4.25     94   100.0    94     204-EMAKIARDLFCS-215  
 ALL LOOP  8     8.57     40   100.0    40     228-AFAFI-232  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     0.36      3   100.0     3      26-AAF-28   
 CA  LOOP  2     0.66      7   100.0     7      52-STPDEKG-58   
 CA  LOOP  3     2.94      7   100.0     7      79-RILKDHQ-85   
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 CA  LOOP  5     2.26      4   100.0     4     128-NPNR-131  
 CA  LOOP  6     1.86     10   100.0    10     181-VLTAVLQDHG-190  
 CA  LOOP  7     1.87     12   100.0    12     204-EMAKIARDLFCS-215  
 CA  LOOP  8     2.97      5   100.0     5     228-AFAFI-232  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     1.22     15   100.0    15      26-AAF-28   
 MC  LOOP  2     1.19     34   100.0    34      52-STPDEKG-58   
 MC  LOOP  3     3.03     35   100.0    35      79-RILKDHQ-85   
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 MC  LOOP  5     2.64     20   100.0    20     128-NPNR-131  
 MC  LOOP  6     1.99     49   100.0    49     181-VLTAVLQDHG-190  
 MC  LOOP  7     1.89     60   100.0    60     204-EMAKIARDLFCS-215  
 MC  LOOP  8     3.31     25   100.0    25     228-AFAFI-232  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     2.33     21   100.0    21      26-AAF-28   
 ALL LOOP  2     2.06     50   100.0    50      52-STPDEKG-58   
 ALL LOOP  3     5.07     63   100.0    63      79-RILKDHQ-85   
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 ALL LOOP  5     3.46     34   100.0    34     128-NPNR-131  
 ALL LOOP  6     2.70     73   100.0    73     181-VLTAVLQDHG-190  
 ALL LOOP  7     2.40     94   100.0    94     204-EMAKIARDLFCS-215  
 ALL LOOP  8     5.40     40   100.0    40     228-AFAFI-232  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    2.071      0.581       0.293    216    95.6   226     ERRCA  
     WELL ORDERED  . . . . .    1.997      0.566       0.286    182    94.8   192     ERRCA  
     NO INTER CONTACTS . . .    2.086      0.593       0.299    188    94.9   198     ERRCA  
     SHIFTED CHAIN . . . . .    2.241      0.616       0.308    182    94.8   192     ERRCA  
     ALTERNATIVE PARENT  . .    2.620      0.684       0.342     83    92.2    90     ERRCA  
     SECONDARY STRUCTURE . .    1.452      0.554       0.280    122   100.0   122     ERRCA  
     LARGE SHIFTS/INSERTIONS    3.584      0.751       0.375     60    88.2    68     ERRCA  
     SURFACE . . . . . . . .    2.226      0.588       0.297    108    93.9   115     ERRCA  
     BURIED  . . . . . . . .    1.915      0.574       0.288    108    97.3   111     ERRCA  
     CORE  . . . . . . . . .    1.489      0.516       0.261    156    98.7   158     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    2.124      0.590       0.297   1065    95.6  1114     ERRMC  
     WELL ORDERED  . . . . .    2.028      0.577       0.291    902    94.9   950     ERRMC  
     NO INTER CONTACTS . . .    2.142      0.601       0.302    927    95.0   976     ERRMC  
     SHIFTED CHAIN . . . . .    2.270      0.618       0.309    899    94.8   948     ERRMC  
     ALTERNATIVE PARENT  . .    2.654      0.684       0.342    410    92.1   445     ERRMC  
     SECONDARY STRUCTURE . .    1.488      0.558       0.281    607   100.0   607     ERRMC  
     LARGE SHIFTS/INSERTIONS    3.606      0.750       0.375    297    88.1   337     ERRMC  
     SURFACE . . . . . . . .    2.309      0.600       0.302    532    93.8   567     ERRMC  
     BURIED  . . . . . . . .    1.939      0.580       0.292    533    97.4   547     ERRMC  
     CORE  . . . . . . . . .    1.551      0.528       0.267    768    98.8   777     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    3.577      0.700       0.351    844    94.9   889     ERRSC  
     WELL ORDERED  . . . . .    3.412      0.689       0.345    589    94.5   623     ERRSC  
     NO INTER CONTACTS . . .    3.573      0.703       0.353    724    94.1   769     ERRSC  
     RELIABLE SIDE CHAINS  .    3.573      0.695       0.349    728    94.4   771     ERRSC  
     CHANGED ANGLES  . . . .    3.859      0.735       0.368    429    92.9   462     ERRSC  
     SHIFTED CHAIN . . . . .    3.760      0.716       0.358    716    94.1   761     ERRSC  
     ALTERNATIVE PARENT  . .    4.297      0.759       0.379    312    89.9   347     ERRSC  
     SECONDARY STRUCTURE . .    2.942      0.681       0.342    477   100.0   477     ERRSC  
     LARGE SHIFTS/INSERTIONS    5.040      0.791       0.396    231    85.2   271     ERRSC  
     SURFACE . . . . . . . .    4.083      0.719       0.361    425    91.4   465     ERRSC  
     BURIED  . . . . . . . .    3.065      0.680       0.341    419    98.8   424     ERRSC  
     CORE  . . . . . . . . .    3.026      0.666       0.334    613    99.2   618     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    2.795      0.641       0.322   1708    95.3  1793     ERRALL 
     WELL ORDERED  . . . . .    2.602      0.624       0.314   1329    94.7  1403     ERRALL 
     NO INTER CONTACTS . . .    2.798      0.649       0.326   1476    94.6  1561     ERRALL 
     SHIFTED CHAIN . . . . .    2.963      0.664       0.332   1444    94.4  1529     ERRALL 
     ALTERNATIVE PARENT  . .    3.388      0.717       0.358    644    91.1   707     ERRALL 
     SECONDARY STRUCTURE . .    2.161      0.615       0.309    965   100.0   965     ERRALL 
     LARGE SHIFTS/INSERTIONS    4.231      0.767       0.384    471    86.7   543     ERRALL 
     SURFACE . . . . . . . .    3.134      0.657       0.330    857    92.6   925     ERRALL 
     BURIED  . . . . . . . .    2.454      0.626       0.314    851    98.0   868     ERRALL 
     CORE  . . . . . . . . .    2.249      0.594       0.299   1237    99.0  1250     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        47       122       158       192       213     216     226   DISTCA 
CA  (P)     20.80     53.98     69.91     84.96     94.25             226   DISTCA 
CA  (RMS)    0.73      1.21      1.59      2.15      3.09                   DISTCA 
 
ALL (N)       229       749      1057      1371      1657    1708    1793   DISTALL 
ALL (P)     12.77     41.77     58.95     76.46     92.41            1793   DISTALL 
ALL (RMS)    0.72      1.30      1.74      2.41      3.74                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         158           156            60          RMSLSI 
CA  (P)       69.91         69.03         26.55          RMSLSI 
CA  (RMS)      1.56          2.76          4.56          RMSLSI 
 
 
 
END of the results output 
