 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0062.inter 
CONANA-PAIR            ../CONANA/T0062.pair 
# 
NUMBER-OF-PARENTS      6 
ALIGNMENT-DALI(1)      ../PARENTS/casp3.T0062.2cnd.rot 
ALIGNMENT-DALI(2)      ../PARENTS/casp3.T0062.1ndh.rot 
ALIGNMENT-DALI(3)      ../PARENTS/casp3.T0062.1fdr.rot 
ALIGNMENT-DALI(4)      ../PARENTS/casp3.T0062.1amo_A.rot 
ALIGNMENT-DALI(5)      ../PARENTS/casp3.T0062.1fnc.rot 
ALIGNMENT-DALI(6)      ../PARENTS/casp3.T0062.2pia.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 1793 atoms, MODEL 1837 atoms, 1793 common with TARGET 
           Number of atoms possible to evaluate: 724 
 
 
 CA-RMS TARGET<->PARENT(2cnd)	 2.429767 
 
 CA-RMS TARGET<->PARENT(1ndh)	 2.615694 
 
 CA-RMS TARGET<->PARENT(1fdr)	 3.203933 
 
 CA-RMS TARGET<->PARENT(1amo_A)	 2.678109 
 
 CA-RMS TARGET<->PARENT(1fnc)	 2.402750 
 
 CA-RMS TARGET<->PARENT(2pia)	 2.791516 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    50.65           82.4   170    38.0   447     ARMSMC  
     WELL ORDERED  . . . . .    52.65           80.9   157    41.6   377     ARMSMC  
     NO INTER CONTACTS . . .    49.99           81.8   143    36.6   391     ARMSMC  
     SHIFTED CHAIN . . . . .    49.52           84.1   138    36.3   380     ARMSMC  
     ALTERNATIVE PARENT  . .    37.33           90.3    62    34.4   180     ARMSMC  
     SECONDARY STRUCTURE . .    57.05           76.3    93    38.1   244     ARMSMC  
     LARGE SHIFTS/INSERTIONS    28.76           96.9    32    23.7   135     ARMSMC  
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSMC  
     SURFACE . . . . . . . .    49.13           84.1    82    36.0   228     ARMSMC  
     BURIED  . . . . . . . .    52.04           80.7    88    40.2   219     ARMSMC  
     CORE  . . . . . . . . .    54.49           79.0   138    44.2   312     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    82.67           49.1    57    35.0   163     ARMSSC1 
     WELL ORDERED  . . . . .    80.13           52.3    44    41.5   106     ARMSSC1 
     NO INTER CONTACTS . . .    83.24           47.8    46    32.6   141     ARMSSC1 
     RELIABLE SIDE CHAINS  .    82.38           48.1    54    36.0   150     ARMSSC1 
     CHANGED ANGLES  . . . .    87.36           47.5    40    36.7   109     ARMSSC1 
     SHIFTED CHAIN . . . . .    85.12           45.7    46    33.6   137     ARMSSC1 
     ALTERNATIVE PARENT  . .    82.77           43.5    23    34.8    66     ARMSSC1 
     SECONDARY STRUCTURE . .    81.49           51.6    31    32.6    95     ARMSSC1 
     LARGE SHIFTS/INSERTIONS    87.53           40.0    15    29.4    51     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .    89.72           43.3    30    33.7    89     ARMSSC1 
     BURIED  . . . . . . . .    74.04           55.6    27    36.5    74     ARMSSC1 
     CORE  . . . . . . . . .    80.86           52.4    42    37.5   112     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    70.98           52.8    36    31.6   114     ARMSSC2 
     WELL ORDERED  . . . . .    69.02           57.7    26    37.7    69     ARMSSC2 
     NO INTER CONTACTS . . .    75.78           48.4    31    31.0   100     ARMSSC2 
     RELIABLE SIDE CHAINS  .    67.24           65.4    26    28.3    92     ARMSSC2 
     CHANGED ANGLES  . . . .    70.76           53.6    28    30.8    91     ARMSSC2 
     SHIFTED CHAIN . . . . .    73.33           57.1    28    28.9    97     ARMSSC2 
     ALTERNATIVE PARENT  . .    66.32           64.3    14    31.1    45     ARMSSC2 
     SECONDARY STRUCTURE . .    76.86           44.4    18    29.0    62     ARMSSC2 
     LARGE SHIFTS/INSERTIONS    68.06           66.7    12    31.6    38     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .    56.00           65.0    20    32.3    62     ARMSSC2 
     BURIED  . . . . . . . .    86.11           37.5    16    30.8    52     ARMSSC2 
     CORE  . . . . . . . . .    72.39           45.8    24    31.6    76     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    66.07           28.6     7    21.9    32     ARMSSC3 
     WELL ORDERED  . . . . .    61.11           33.3     3    18.8    16     ARMSSC3 
     NO INTER CONTACTS . . .    66.07           28.6     7    22.6    31     ARMSSC3 
     RELIABLE SIDE CHAINS  .    62.57           25.0     4    14.8    27     ARMSSC3 
     CHANGED ANGLES  . . . .    77.07           33.3     3    13.6    22     ARMSSC3 
     SHIFTED CHAIN . . . . .    55.96           40.0     5    17.9    28     ARMSSC3 
     ALTERNATIVE PARENT  . .    43.43           33.3     3    21.4    14     ARMSSC3 
     SECONDARY STRUCTURE . .    58.17           66.7     3    18.8    16     ARMSSC3 
     LARGE SHIFTS/INSERTIONS    52.47            0.0     2    18.2    11     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .    69.55           25.0     4    21.1    19     ARMSSC3 
     BURIED  . . . . . . . .    61.11           33.3     3    23.1    13     ARMSSC3 
     CORE  . . . . . . . . .    70.78           40.0     5    23.8    21     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0     9     ARMSSC4 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0     2     ARMSSC4 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0     9     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0     9     ARMSSC4 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0     8     ARMSSC4 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0     8     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     5     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0     5     ARMSSC4 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0     1     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0     7     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     2     ARMSSC4 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0     8     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =  -0.65673     r(1,2) =  -0.51071     r(1,3) =  -0.55487 
 r(2,1) =   0.46332     r(2,2) =  -0.85379     r(2,3) =   0.23745 
 r(3,1) =  -0.59501     r(3,2) =  -0.10114     r(3,3) =   0.79733 
THE OFFSET VECTOR: 
 v(1) =  43.14395     v(2) =  62.04698     v(3) = 105.19489 
 
 Number of iteration 25                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.33           (Number of atoms:   57) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    4.39         92    40.7   226     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0477                            CRMSCA  
     WELL ORDERED  . . . . .    4.38         86    44.8   192     CRMSCA  
     NO INTER CONTACTS . . .    4.51         76    38.4   198     CRMSCA  
     SHIFTED CHAIN . . . . .    4.52         76    39.6   192     CRMSCA  
     ALTERNATIVE PARENT  . .    4.36         38    42.2    90     CRMSCA  
     SECONDARY STRUCTURE . .    4.07         52    42.6   122     CRMSCA  
     SHIFTED SS UNITS  . . .    0.00          0     0.0    11     CRMSCA  
     LARGE SHIFTS/INSERTIONS    5.19         23    33.8    68     CRMSCA  
     SURFACE . . . . . . . .    4.79         44    38.3   115     CRMSCA  
     BURIED  . . . . . . . .    3.98         48    43.2   111     CRMSCA  
     CORE  . . . . . . . . .    4.09         69    43.7   158     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    4.51        451    40.5  1114     CRMSMC  
     WELL ORDERED  . . . . .    4.53        422    44.4   950     CRMSMC  
     NO INTER CONTACTS . . .    4.64        373    38.2   976     CRMSMC  
     SHIFTED CHAIN . . . . .    4.64        375    39.6   948     CRMSMC  
     ALTERNATIVE PARENT  . .    4.55        188    42.2   445     CRMSMC  
     SECONDARY STRUCTURE . .    4.19        257    42.3   607     CRMSMC  
     SHIFTED SS UNITS  . . .    0.00          0     0.0    55     CRMSMC  
     LARGE SHIFTS/INSERTIONS    5.37        115    34.1   337     CRMSMC  
     SURFACE . . . . . . . .    4.92        215    37.9   567     CRMSMC  
     BURIED  . . . . . . . .    4.10        236    43.1   547     CRMSMC  
     CORE  . . . . . . . . .    4.18        336    43.2   777     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    6.01        356    40.0   889     CRMSSC  
     WELL ORDERED  . . . . .    5.77        286    45.9   623     CRMSSC  
     NO INTER CONTACTS . . .    6.10        294    38.2   769     CRMSSC  
     RELIABLE SIDE CHAINS  .    5.67        296    38.4   771     CRMSSC  
     CHANGED ANGLES  . . . .    6.62        175    37.9   462     CRMSSC  
     SECONDARY STRUCTURE . .    5.52        188    39.4   477     CRMSSC  
     LARGE SHIFTS/INSERTIONS    6.83         97    35.8   271     CRMSSC  
     SURFACE . . . . . . . .    6.92        166    35.7   465     CRMSSC  
     BURIED  . . . . . . . .    5.10        190    44.8   424     CRMSSC  
     CORE  . . . . . . . . .    5.68        259    41.9   618     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    5.25        724    40.4  1793     CRMSALL 
     WELL ORDERED  . . . . .    5.08        631    45.0  1403     CRMSALL 
     NO INTER CONTACTS . . .    5.36        598    38.3  1561     CRMSALL 
     SHIFTED CHAIN . . . . .    5.38        599    39.2  1529     CRMSALL 
     ALTERNATIVE PARENT  . .    5.37        295    41.7   707     CRMSALL 
     SECONDARY STRUCTURE . .    4.80        396    41.0   965     CRMSALL 
     LARGE SHIFTS/INSERTIONS    6.09        189    34.8   543     CRMSALL 
     SURFACE . . . . . . . .    5.93        342    37.0   925     CRMSALL 
     BURIED  . . . . . . . .    4.55        382    44.0   868     CRMSALL 
     CORE  . . . . . . . . .    4.92        535    42.8  1250     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     0.00      0     0.0     3      26-AAF-28   
 CA  LOOP  2     0.00      0     0.0     7      52-STPDEKG-58   
 CA  LOOP  3     0.00      0     0.0     7      79-RILKDHQ-85   
 CA  LOOP  4     7.12      5    62.5     8      95-AWLRDDEE-102  
 CA  LOOP  5     3.70      4   100.0     4     128-NPNR-131  
 CA  LOOP  6     3.88      9    90.0    10     181-VLTAVLQDHG-190  
 CA  LOOP  7     0.00      0     0.0    12     204-EMAKIARDLFCS-215  
 CA  LOOP  8     0.00      0     0.0     5     228-AFAFI-232  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     0.00      0     0.0    15      26-AAF-28   
 MC  LOOP  2     0.00      0     0.0    34      52-STPDEKG-58   
 MC  LOOP  3     0.00      0     0.0    35      79-RILKDHQ-85   
 MC  LOOP  4     7.30     25    62.5    40      95-AWLRDDEE-102  
 MC  LOOP  5     4.18     20   100.0    20     128-NPNR-131  
 MC  LOOP  6     4.08     45    91.8    49     181-VLTAVLQDHG-190  
 MC  LOOP  7     0.00      0     0.0    60     204-EMAKIARDLFCS-215  
 MC  LOOP  8     0.00      0     0.0    25     228-AFAFI-232  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     0.00      0     0.0    21      26-AAF-28   
 ALL LOOP  2     0.00      0     0.0    50      52-STPDEKG-58   
 ALL LOOP  3     0.00      0     0.0    63      79-RILKDHQ-85   
 ALL LOOP  4     8.53     45    62.5    72      95-AWLRDDEE-102  
 ALL LOOP  5     4.70     34   100.0    34     128-NPNR-131  
 ALL LOOP  6     5.03     69    94.5    73     181-VLTAVLQDHG-190  
 ALL LOOP  7     0.00      0     0.0    94     204-EMAKIARDLFCS-215  
 ALL LOOP  8     0.00      0     0.0    40     228-AFAFI-232  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 WARNING! LOOP  1 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  2 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  3 cannot be considered (not enough atoms). 
 
 CA  LOOP  4     1.31      5    62.5     8      95-AWLRDDEE-102  
 CA  LOOP  5     1.52      4   100.0     4     128-NPNR-131  
 CA  LOOP  6     1.68      9    90.0    10     181-VLTAVLQDHG-190  
 WARNING! LOOP  7 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  8 cannot be considered (not enough atoms). 
 
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 WARNING! LOOP  1 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  2 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  3 cannot be considered (not enough atoms). 
 
 MC  LOOP  4     2.14     25    62.5    40      95-AWLRDDEE-102  
 MC  LOOP  5     2.45     20   100.0    20     128-NPNR-131  
 MC  LOOP  6     1.84     45    91.8    49     181-VLTAVLQDHG-190  
 WARNING! LOOP  7 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  8 cannot be considered (not enough atoms). 
 
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 WARNING! LOOP  1 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  2 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  3 cannot be considered (not enough atoms). 
 
 ALL LOOP  4     3.84     45    62.5    72      95-AWLRDDEE-102  
 ALL LOOP  5     4.33     34   100.0    34     128-NPNR-131  
 ALL LOOP  6     2.56     69    94.5    73     181-VLTAVLQDHG-190  
 WARNING! LOOP  7 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  8 cannot be considered (not enough atoms). 
 
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    2.701      0.578       0.290     92    40.7   226     ERRCA  
     WELL ORDERED  . . . . .    2.665      0.563       0.283     86    44.8   192     ERRCA  
     NO INTER CONTACTS . . .    2.794      0.589       0.295     76    38.4   198     ERRCA  
     SHIFTED CHAIN . . . . .    2.939      0.621       0.311     76    39.6   192     ERRCA  
     ALTERNATIVE PARENT  . .    3.113      0.686       0.343     38    42.2    90     ERRCA  
     SECONDARY STRUCTURE . .    2.366      0.580       0.291     52    42.6   122     ERRCA  
     LARGE SHIFTS/INSERTIONS    4.210      0.758       0.379     23    33.8    68     ERRCA  
     SURFACE . . . . . . . .    3.139      0.591       0.296     44    38.3   115     ERRCA  
     BURIED  . . . . . . . .    2.300      0.566       0.285     48    43.2   111     ERRCA  
     CORE  . . . . . . . . .    2.198      0.518       0.260     69    43.7   158     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    2.808      0.586       0.295    451    40.5  1114     ERRMC  
     WELL ORDERED  . . . . .    2.796      0.577       0.290    422    44.4   950     ERRMC  
     NO INTER CONTACTS . . .    2.913      0.599       0.301    373    38.2   976     ERRMC  
     SHIFTED CHAIN . . . . .    3.031      0.627       0.315    375    39.6   948     ERRMC  
     ALTERNATIVE PARENT  . .    3.253      0.688       0.344    188    42.2   445     ERRMC  
     SECONDARY STRUCTURE . .    2.452      0.584       0.292    257    42.3   607     ERRMC  
     LARGE SHIFTS/INSERTIONS    4.349      0.762       0.381    115    34.1   337     ERRMC  
     SURFACE . . . . . . . .    3.289      0.607       0.306    215    37.9   567     ERRMC  
     BURIED  . . . . . . . .    2.370      0.568       0.285    236    43.1   547     ERRMC  
     CORE  . . . . . . . . .    2.281      0.526       0.265    336    43.2   777     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    4.209      0.699       0.350    356    40.0   889     ERRSC  
     WELL ORDERED  . . . . .    4.016      0.693       0.347    286    45.9   623     ERRSC  
     NO INTER CONTACTS . . .    4.295      0.706       0.354    294    38.2   769     ERRSC  
     RELIABLE SIDE CHAINS  .    3.905      0.684       0.342    296    38.4   771     ERRSC  
     CHANGED ANGLES  . . . .    4.734      0.739       0.369    175    37.9   462     ERRSC  
     SHIFTED CHAIN . . . . .    4.477      0.733       0.367    295    38.8   761     ERRSC  
     ALTERNATIVE PARENT  . .    4.781      0.752       0.376    143    41.2   347     ERRSC  
     SECONDARY STRUCTURE . .    3.769      0.702       0.351    188    39.4   477     ERRSC  
     LARGE SHIFTS/INSERTIONS    5.716      0.807       0.404     97    35.8   271     ERRSC  
     SURFACE . . . . . . . .    5.092      0.729       0.365    166    35.7   465     ERRSC  
     BURIED  . . . . . . . .    3.438      0.672       0.336    190    44.8   424     ERRSC  
     CORE  . . . . . . . . .    3.645      0.658       0.329    259    41.9   618     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    3.445      0.638       0.320    724    40.4  1793     ERRALL 
     WELL ORDERED  . . . . .    3.297      0.626       0.314    631    45.0  1403     ERRALL 
     NO INTER CONTACTS . . .    3.543      0.648       0.325    598    38.3  1561     ERRALL 
     SHIFTED CHAIN . . . . .    3.692      0.675       0.338    599    39.2  1529     ERRALL 
     ALTERNATIVE PARENT  . .    3.924      0.716       0.358    295    41.7   707     ERRALL 
     SECONDARY STRUCTURE . .    3.020      0.637       0.319    396    41.0   965     ERRALL 
     LARGE SHIFTS/INSERTIONS    4.951      0.779       0.390    189    34.8   543     ERRALL 
     SURFACE . . . . . . . .    4.119      0.663       0.333    342    37.0   925     ERRALL 
     BURIED  . . . . . . . .    2.841      0.616       0.308    382    44.0   868     ERRALL 
     CORE  . . . . . . . . .    2.913      0.589       0.296    535    42.8  1250     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        23        52        59        71        84      92     226   DISTCA 
CA  (P)     10.18     23.01     26.11     31.42     37.17             226   DISTCA 
CA  (RMS)    0.73      1.21      1.40      2.00      3.32                   DISTCA 
 
ALL (N)       112       309       395       511       653     724    1793   DISTALL 
ALL (P)      6.25     17.23     22.03     28.50     36.42            1793   DISTALL 
ALL (RMS)    0.72      1.26      1.60      2.31      3.88                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         158            69            23          RMSLSI 
CA  (P)       69.91         30.53         10.18          RMSLSI 
CA  (RMS)      1.56          4.09          5.19          RMSLSI 
 
 
 
END of the results output 
