 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0062.inter 
CONANA-PAIR            ../CONANA/T0062.pair 
# 
NUMBER-OF-PARENTS      6 
ALIGNMENT-DALI(1)      ../PARENTS/casp3.T0062.2cnd.rot 
ALIGNMENT-DALI(2)      ../PARENTS/casp3.T0062.1ndh.rot 
ALIGNMENT-DALI(3)      ../PARENTS/casp3.T0062.1fdr.rot 
ALIGNMENT-DALI(4)      ../PARENTS/casp3.T0062.1amo_A.rot 
ALIGNMENT-DALI(5)      ../PARENTS/casp3.T0062.1fnc.rot 
ALIGNMENT-DALI(6)      ../PARENTS/casp3.T0062.2pia.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 1793 atoms, MODEL 1837 atoms, 1793 common with TARGET 
           Number of atoms possible to evaluate: 1758 
 
 
 CA-RMS TARGET<->PARENT(2cnd)	 2.429767 
 
 CA-RMS TARGET<->PARENT(1ndh)	 2.615694 
 
 CA-RMS TARGET<->PARENT(1fdr)	 3.203933 
 
 CA-RMS TARGET<->PARENT(1amo_A)	 2.678109 
 
 CA-RMS TARGET<->PARENT(1fnc)	 2.402750 
 
 CA-RMS TARGET<->PARENT(2pia)	 2.791516 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    61.64           60.5   430    96.2   447     ARMSMC  
     WELL ORDERED  . . . . .    59.63           62.5   365    96.8   377     ARMSMC  
     NO INTER CONTACTS . . .    61.46           61.0   377    96.4   391     ARMSMC  
     SHIFTED CHAIN . . . . .    62.88           59.8   363    95.5   380     ARMSMC  
     ALTERNATIVE PARENT  . .    64.74           56.1   173    96.1   180     ARMSMC  
     SECONDARY STRUCTURE . .    60.63           57.8   244   100.0   244     ARMSMC  
     LARGE SHIFTS/INSERTIONS    73.20           47.2   125    92.6   135     ARMSMC  
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSMC  
     SURFACE . . . . . . . .    63.56           56.8   222    97.4   228     ARMSMC  
     BURIED  . . . . . . . .    59.53           64.4   208    95.0   219     ARMSMC  
     CORE  . . . . . . . . .    56.22           65.9   305    97.8   312     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    79.22           50.0   158    96.9   163     ARMSSC1 
     WELL ORDERED  . . . . .    72.92           58.3   103    97.2   106     ARMSSC1 
     NO INTER CONTACTS . . .    78.62           50.4   137    97.2   141     ARMSSC1 
     RELIABLE SIDE CHAINS  .    79.48           49.7   145    96.7   150     ARMSSC1 
     CHANGED ANGLES  . . . .    82.71           44.8   105    96.3   109     ARMSSC1 
     SHIFTED CHAIN . . . . .    79.87           50.0   132    96.4   137     ARMSSC1 
     ALTERNATIVE PARENT  . .    80.10           45.3    64    97.0    66     ARMSSC1 
     SECONDARY STRUCTURE . .    77.54           49.5    95   100.0    95     ARMSSC1 
     LARGE SHIFTS/INSERTIONS    77.10           52.1    48    94.1    51     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .    85.01           43.7    87    97.8    89     ARMSSC1 
     BURIED  . . . . . . . .    71.48           57.7    71    95.9    74     ARMSSC1 
     CORE  . . . . . . . . .    80.13           49.1   110    98.2   112     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    73.21           45.0   109    95.6   114     ARMSSC2 
     WELL ORDERED  . . . . .    74.53           48.5    66    95.7    69     ARMSSC2 
     NO INTER CONTACTS . . .    72.13           45.8    96    96.0   100     ARMSSC2 
     RELIABLE SIDE CHAINS  .    72.94           42.5    87    94.6    92     ARMSSC2 
     CHANGED ANGLES  . . . .    70.14           44.2    86    94.5    91     ARMSSC2 
     SHIFTED CHAIN . . . . .    71.66           45.7    92    94.8    97     ARMSSC2 
     ALTERNATIVE PARENT  . .    57.81           51.2    43    95.6    45     ARMSSC2 
     SECONDARY STRUCTURE . .    78.51           40.3    62   100.0    62     ARMSSC2 
     LARGE SHIFTS/INSERTIONS    59.20           54.3    35    92.1    38     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .    72.41           48.3    60    96.8    62     ARMSSC2 
     BURIED  . . . . . . . .    74.19           40.8    49    94.2    52     ARMSSC2 
     CORE  . . . . . . . . .    78.98           40.5    74    97.4    76     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    74.76           30.0    30    93.8    32     ARMSSC3 
     WELL ORDERED  . . . . .    75.66           33.3    15    93.8    16     ARMSSC3 
     NO INTER CONTACTS . . .    74.09           31.0    29    93.5    31     ARMSSC3 
     RELIABLE SIDE CHAINS  .    75.73           28.0    25    92.6    27     ARMSSC3 
     CHANGED ANGLES  . . . .    78.83           22.7    22   100.0    22     ARMSSC3 
     SHIFTED CHAIN . . . . .    69.30           34.6    26    92.9    28     ARMSSC3 
     ALTERNATIVE PARENT  . .    55.60           42.9    14   100.0    14     ARMSSC3 
     SECONDARY STRUCTURE . .    64.42           37.5    16   100.0    16     ARMSSC3 
     LARGE SHIFTS/INSERTIONS    67.53           22.2     9    81.8    11     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .    79.00           27.8    18    94.7    19     ARMSSC3 
     BURIED  . . . . . . . .    67.89           33.3    12    92.3    13     ARMSSC3 
     CORE  . . . . . . . . .    77.64           33.3    21   100.0    21     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    80.10           33.3     9   100.0     9     ARMSSC4 
     WELL ORDERED  . . . . .    48.08           50.0     2   100.0     2     ARMSSC4 
     NO INTER CONTACTS . . .    80.10           33.3     9   100.0     9     ARMSSC4 
     RELIABLE SIDE CHAINS  .    80.10           33.3     9   100.0     9     ARMSSC4 
     CHANGED ANGLES  . . . .    78.58           37.5     8   100.0     8     ARMSSC4 
     SHIFTED CHAIN . . . . .    84.95           25.0     8   100.0     8     ARMSSC4 
     ALTERNATIVE PARENT  . .    96.06           20.0     5   100.0     5     ARMSSC4 
     SECONDARY STRUCTURE . .   100.64            0.0     5   100.0     5     ARMSSC4 
     LARGE SHIFTS/INSERTIONS    10.86          100.0     1   100.0     1     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .    85.41           42.9     7   100.0     7     ARMSSC4 
     BURIED  . . . . . . . .    57.77            0.0     2   100.0     2     ARMSSC4 
     CORE  . . . . . . . . .    84.87           25.0     8   100.0     8     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =  -0.82664     r(1,2) =  -0.25272     r(1,3) =  -0.50280 
 r(2,1) =   0.24219     r(2,2) =  -0.96628     r(2,3) =   0.08750 
 r(3,1) =  -0.50795     r(3,2) =  -0.04944     r(3,3) =   0.85996 
THE OFFSET VECTOR: 
 v(1) =  37.42553     v(2) =  61.87439     v(3) = 104.34434 
 
 Number of iteration 55                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.50           (Number of atoms:  118) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    4.25        222    98.2   226     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0192                            CRMSCA  
     WELL ORDERED  . . . . .    3.92        191    99.5   192     CRMSCA  
     NO INTER CONTACTS . . .    4.34        194    98.0   198     CRMSCA  
     SHIFTED CHAIN . . . . .    4.05        188    97.9   192     CRMSCA  
     ALTERNATIVE PARENT  . .    4.26         90   100.0    90     CRMSCA  
     SECONDARY STRUCTURE . .    3.44        122   100.0   122     CRMSCA  
     SHIFTED SS UNITS  . . .    2.57         11   100.0    11     CRMSCA  
     LARGE SHIFTS/INSERTIONS    5.15         64    94.1    68     CRMSCA  
     SURFACE . . . . . . . .    4.54        112    97.4   115     CRMSCA  
     BURIED  . . . . . . . .    3.94        110    99.1   111     CRMSCA  
     CORE  . . . . . . . . .    3.83        158   100.0   158     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    4.37       1094    98.2  1114     CRMSMC  
     WELL ORDERED  . . . . .    4.05        945    99.5   950     CRMSMC  
     NO INTER CONTACTS . . .    4.46        956    98.0   976     CRMSMC  
     SHIFTED CHAIN . . . . .    4.16        928    97.9   948     CRMSMC  
     ALTERNATIVE PARENT  . .    4.36        445   100.0   445     CRMSMC  
     SECONDARY STRUCTURE . .    3.57        607   100.0   607     CRMSMC  
     SHIFTED SS UNITS  . . .    2.72         55   100.0    55     CRMSMC  
     LARGE SHIFTS/INSERTIONS    5.30        317    94.1   337     CRMSMC  
     SURFACE . . . . . . . .    4.68        552    97.4   567     CRMSMC  
     BURIED  . . . . . . . .    4.04        542    99.1   547     CRMSMC  
     CORE  . . . . . . . . .    3.94        777   100.0   777     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    6.22        870    97.9   889     CRMSSC  
     WELL ORDERED  . . . . .    5.55        616    98.9   623     CRMSSC  
     NO INTER CONTACTS . . .    6.32        750    97.5   769     CRMSSC  
     RELIABLE SIDE CHAINS  .    6.28        752    97.5   771     CRMSSC  
     CHANGED ANGLES  . . . .    6.71        447    96.8   462     CRMSSC  
     SECONDARY STRUCTURE . .    5.31        477   100.0   477     CRMSSC  
     LARGE SHIFTS/INSERTIONS    7.20        252    93.0   271     CRMSSC  
     SURFACE . . . . . . . .    7.14        453    97.4   465     CRMSSC  
     BURIED  . . . . . . . .    5.04        417    98.3   424     CRMSSC  
     CORE  . . . . . . . . .    5.77        618   100.0   618     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    5.31       1758    98.0  1793     CRMSALL 
     WELL ORDERED  . . . . .    4.72       1392    99.2  1403     CRMSALL 
     NO INTER CONTACTS . . .    5.41       1526    97.8  1561     CRMSALL 
     SHIFTED CHAIN . . . . .    5.11       1494    97.7  1529     CRMSALL 
     ALTERNATIVE PARENT  . .    5.31        707   100.0   707     CRMSALL 
     SECONDARY STRUCTURE . .    4.46        965   100.0   965     CRMSALL 
     LARGE SHIFTS/INSERTIONS    6.24        508    93.6   543     CRMSALL 
     SURFACE . . . . . . . .    5.98        901    97.4   925     CRMSALL 
     BURIED  . . . . . . . .    4.50        857    98.7   868     CRMSALL 
     CORE  . . . . . . . . .    4.89       1250   100.0  1250     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     5.72      3   100.0     3      26-AAF-28   
 CA  LOOP  2     4.28      7   100.0     7      52-STPDEKG-58   
 CA  LOOP  3     3.96      7   100.0     7      79-RILKDHQ-85   
 CA  LOOP  4     8.45      8   100.0     8      95-AWLRDDEE-102  
 CA  LOOP  5     3.02      4   100.0     4     128-NPNR-131  
 CA  LOOP  6     4.12     10   100.0    10     181-VLTAVLQDHG-190  
 CA  LOOP  7     3.41     12   100.0    12     204-EMAKIARDLFCS-215  
 CA  LOOP  8    10.71      1    20.0     5     228-AFAFI-232  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     5.60     15   100.0    15      26-AAF-28   
 MC  LOOP  2     4.36     34   100.0    34      52-STPDEKG-58   
 MC  LOOP  3     4.07     35   100.0    35      79-RILKDHQ-85   
 MC  LOOP  4     8.60     40   100.0    40      95-AWLRDDEE-102  
 MC  LOOP  5     3.53     20   100.0    20     128-NPNR-131  
 MC  LOOP  6     4.09     49   100.0    49     181-VLTAVLQDHG-190  
 MC  LOOP  7     3.67     60   100.0    60     204-EMAKIARDLFCS-215  
 MC  LOOP  8    11.79      5    20.0    25     228-AFAFI-232  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     5.11     21   100.0    21      26-AAF-28   
 ALL LOOP  2     4.94     50   100.0    50      52-STPDEKG-58   
 ALL LOOP  3     5.09     63   100.0    63      79-RILKDHQ-85   
 ALL LOOP  4     9.90     72   100.0    72      95-AWLRDDEE-102  
 ALL LOOP  5     3.95     34   100.0    34     128-NPNR-131  
 ALL LOOP  6     5.06     73   100.0    73     181-VLTAVLQDHG-190  
 ALL LOOP  7     4.59     94   100.0    94     204-EMAKIARDLFCS-215  
 ALL LOOP  8    11.79      5    12.5    40     228-AFAFI-232  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     0.04      3   100.0     3      26-AAF-28   
 CA  LOOP  2     0.86      7   100.0     7      52-STPDEKG-58   
 CA  LOOP  3     3.23      7   100.0     7      79-RILKDHQ-85   
 CA  LOOP  4     3.86      8   100.0     8      95-AWLRDDEE-102  
 CA  LOOP  5     0.62      4   100.0     4     128-NPNR-131  
 CA  LOOP  6     1.77     10   100.0    10     181-VLTAVLQDHG-190  
 CA  LOOP  7     2.60     12   100.0    12     204-EMAKIARDLFCS-215  
 WARNING! LOOP  8 cannot be considered (not enough atoms). 
 
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     1.27     15   100.0    15      26-AAF-28   
 MC  LOOP  2     1.21     34   100.0    34      52-STPDEKG-58   
 MC  LOOP  3     3.33     35   100.0    35      79-RILKDHQ-85   
 MC  LOOP  4     3.98     40   100.0    40      95-AWLRDDEE-102  
 MC  LOOP  5     1.75     20   100.0    20     128-NPNR-131  
 MC  LOOP  6     1.98     49   100.0    49     181-VLTAVLQDHG-190  
 MC  LOOP  7     2.82     60   100.0    60     204-EMAKIARDLFCS-215  
 WARNING! LOOP  8 cannot be considered (not enough atoms). 
 
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     2.36     21   100.0    21      26-AAF-28   
 ALL LOOP  2     2.01     50   100.0    50      52-STPDEKG-58   
 ALL LOOP  3     5.16     63   100.0    63      79-RILKDHQ-85   
 ALL LOOP  4     6.13     72   100.0    72      95-AWLRDDEE-102  
 ALL LOOP  5     3.58     34   100.0    34     128-NPNR-131  
 ALL LOOP  6     2.73     73   100.0    73     181-VLTAVLQDHG-190  
 ALL LOOP  7     4.01     94   100.0    94     204-EMAKIARDLFCS-215  
 WARNING! LOOP  8 cannot be considered (not enough atoms). 
 
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.936      0.536       0.578    222    98.2   226     ERRCA  
     WELL ORDERED  . . . . .    6.015      0.548       0.592    191    99.5   192     ERRCA  
     NO INTER CONTACTS . . .    5.914      0.533       0.576    194    98.0   198     ERRCA  
     SHIFTED CHAIN . . . . .    5.894      0.528       0.575    188    97.9   192     ERRCA  
     ALTERNATIVE PARENT  . .    5.461      0.471       0.524     90   100.0    90     ERRCA  
     SECONDARY STRUCTURE . .    6.569      0.612       0.652    122   100.0   122     ERRCA  
     LARGE SHIFTS/INSERTIONS    4.884      0.400       0.454     64    94.1    68     ERRCA  
     SURFACE . . . . . . . .    5.660      0.498       0.543    112    97.4   115     ERRCA  
     BURIED  . . . . . . . .    6.216      0.575       0.613    110    99.1   111     ERRCA  
     CORE  . . . . . . . . .    6.362      0.591       0.628    158   100.0   158     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.873      0.528       0.568   1094    98.2  1114     ERRMC  
     WELL ORDERED  . . . . .    5.962      0.542       0.582    945    99.5   950     ERRMC  
     NO INTER CONTACTS . . .    5.847      0.525       0.565    956    98.0   976     ERRMC  
     SHIFTED CHAIN . . . . .    5.842      0.522       0.567    928    97.9   948     ERRMC  
     ALTERNATIVE PARENT  . .    5.415      0.466       0.518    445   100.0   445     ERRMC  
     SECONDARY STRUCTURE . .    6.474      0.600       0.640    607   100.0   607     ERRMC  
     LARGE SHIFTS/INSERTIONS    4.873      0.400       0.448    317    94.1   337     ERRMC  
     SURFACE . . . . . . . .    5.570      0.488       0.531    552    97.4   567     ERRMC  
     BURIED  . . . . . . . .    6.182      0.570       0.606    542    99.1   547     ERRMC  
     CORE  . . . . . . . . .    6.281      0.581       0.618    777   100.0   777     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    4.925      0.410       0.439    870    97.9   889     ERRSC  
     WELL ORDERED  . . . . .    5.144      0.443       0.476    616    98.9   623     ERRSC  
     NO INTER CONTACTS . . .    4.955      0.413       0.440    750    97.5   769     ERRSC  
     RELIABLE SIDE CHAINS  .    4.936      0.408       0.437    752    97.5   771     ERRSC  
     CHANGED ANGLES  . . . .    4.599      0.365       0.393    447    96.8   462     ERRSC  
     SHIFTED CHAIN . . . . .    4.777      0.398       0.431    742    97.5   761     ERRSC  
     ALTERNATIVE PARENT  . .    4.335      0.344       0.380    347   100.0   347     ERRSC  
     SECONDARY STRUCTURE . .    5.490      0.475       0.514    477   100.0   477     ERRSC  
     LARGE SHIFTS/INSERTIONS    3.918      0.294       0.314    252    93.0   271     ERRSC  
     SURFACE . . . . . . . .    4.540      0.351       0.376    453    97.4   465     ERRSC  
     BURIED  . . . . . . . .    5.343      0.474       0.508    417    98.3   424     ERRSC  
     CORE  . . . . . . . . .    5.335      0.457       0.490    618   100.0   618     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.452      0.475       0.510   1758    98.0  1793     ERRALL 
     WELL ORDERED  . . . . .    5.637      0.502       0.540   1392    99.2  1403     ERRALL 
     NO INTER CONTACTS . . .    5.452      0.475       0.509   1526    97.8  1561     ERRALL 
     SHIFTED CHAIN . . . . .    5.365      0.466       0.505   1494    97.7  1529     ERRALL 
     ALTERNATIVE PARENT  . .    4.945      0.412       0.457    707   100.0   707     ERRALL 
     SECONDARY STRUCTURE . .    6.032      0.543       0.583    965   100.0   965     ERRALL 
     LARGE SHIFTS/INSERTIONS    4.489      0.356       0.392    508    93.6   543     ERRALL 
     SURFACE . . . . . . . .    5.114      0.426       0.460    901    97.4   925     ERRALL 
     BURIED  . . . . . . . .    5.809      0.527       0.563    857    98.7   868     ERRALL 
     CORE  . . . . . . . . .    5.844      0.523       0.558   1250   100.0  1250     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        41        93       126       174       214     222     226   DISTCA 
CA  (P)     18.14     41.15     55.75     76.99     94.69             226   DISTCA 
CA  (RMS)    0.71      1.23      1.62      2.42      3.67                   DISTCA 
 
ALL (N)       213       593       877      1227      1628    1758    1793   DISTALL 
ALL (P)     11.88     33.07     48.91     68.43     90.80            1793   DISTALL 
ALL (RMS)    0.72      1.28      1.76      2.55      4.18                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         158           158            64          RMSLSI 
CA  (P)       69.91         69.91         28.32          RMSLSI 
CA  (RMS)      1.56          3.83          5.15          RMSLSI 
 
 
 
END of the results output 
