 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0062.inter 
CONANA-PAIR            ../CONANA/T0062.pair 
# 
NUMBER-OF-PARENTS      6 
ALIGNMENT-DALI(1)      ../PARENTS/casp3.T0062.2cnd.rot 
ALIGNMENT-DALI(2)      ../PARENTS/casp3.T0062.1ndh.rot 
ALIGNMENT-DALI(3)      ../PARENTS/casp3.T0062.1fdr.rot 
ALIGNMENT-DALI(4)      ../PARENTS/casp3.T0062.1amo_A.rot 
ALIGNMENT-DALI(5)      ../PARENTS/casp3.T0062.1fnc.rot 
ALIGNMENT-DALI(6)      ../PARENTS/casp3.T0062.2pia.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 1793 atoms, MODEL 1072 atoms, 1048 common with TARGET 
           Number of atoms possible to evaluate: 772 
 
 
 CA-RMS TARGET<->PARENT(2cnd)	 2.429767 
 
 CA-RMS TARGET<->PARENT(1ndh)	 2.615694 
 
 CA-RMS TARGET<->PARENT(1fdr)	 3.203933 
 
 CA-RMS TARGET<->PARENT(1amo_A)	 2.678109 
 
 CA-RMS TARGET<->PARENT(1fnc)	 2.402750 
 
 CA-RMS TARGET<->PARENT(2pia)	 2.791516 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    86.12           42.0   314    70.2   447     ARMSMC  
     WELL ORDERED  . . . . .    85.85           40.8   272    72.1   377     ARMSMC  
     NO INTER CONTACTS . . .    87.19           41.6   279    71.4   391     ARMSMC  
     SHIFTED CHAIN . . . . .    86.98           40.3   273    71.8   380     ARMSMC  
     ALTERNATIVE PARENT  . .    80.73           44.3   122    67.8   180     ARMSMC  
     SECONDARY STRUCTURE . .    79.10           48.1   187    76.6   244     ARMSMC  
     LARGE SHIFTS/INSERTIONS    85.73           47.5    80    59.3   135     ARMSMC  
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSMC  
     SURFACE . . . . . . . .    88.02           41.7   151    66.2   228     ARMSMC  
     BURIED  . . . . . . . .    84.32           42.3   163    74.4   219     ARMSMC  
     CORE  . . . . . . . . .    86.26           40.2   234    75.0   312     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   163     ARMSSC1 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   106     ARMSSC1 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   141     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   150     ARMSSC1 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0   109     ARMSSC1 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0   137     ARMSSC1 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0    66     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    95     ARMSSC1 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    51     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    89     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    74     ARMSSC1 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0   112     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   114     ARMSSC2 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    69     ARMSSC2 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   100     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    92     ARMSSC2 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    91     ARMSSC2 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    97     ARMSSC2 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0    45     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    62     ARMSSC2 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    38     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    62     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    52     ARMSSC2 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    76     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    32     ARMSSC3 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    16     ARMSSC3 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    31     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    27     ARMSSC3 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    22     ARMSSC3 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    28     ARMSSC3 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0    14     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    16     ARMSSC3 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    11     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    19     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    13     ARMSSC3 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    21     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0     9     ARMSSC4 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0     2     ARMSSC4 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0     9     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0     9     ARMSSC4 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0     8     ARMSSC4 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0     8     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     5     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0     5     ARMSSC4 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0     1     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0     7     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     2     ARMSSC4 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0     8     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =  -0.90298     r(1,2) =   0.24584     r(1,3) =   0.35239 
 r(2,1) =   0.09058     r(2,2) =  -0.69280     r(2,3) =   0.71542 
 r(3,1) =   0.42002     r(3,2) =   0.67793     r(3,3) =   0.60332 
THE OFFSET VECTOR: 
 v(1) =  35.01363     v(2) =  34.88008     v(3) = 190.28844 
 
 Number of iteration 26                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.27           (Number of atoms:    8) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   17.71        193    85.4   226     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0918                            CRMSCA  
     WELL ORDERED  . . . . .   17.54        170    88.5   192     CRMSCA  
     NO INTER CONTACTS . . .   18.14        173    87.4   198     CRMSCA  
     SHIFTED CHAIN . . . . .   17.91        167    87.0   192     CRMSCA  
     ALTERNATIVE PARENT  . .   19.04         74    82.2    90     CRMSCA  
     SECONDARY STRUCTURE . .   16.94        114    93.4   122     CRMSCA  
     SHIFTED SS UNITS  . . .   17.72         11   100.0    11     CRMSCA  
     LARGE SHIFTS/INSERTIONS   19.68         55    80.9    68     CRMSCA  
     SURFACE . . . . . . . .   19.46         89    77.4   115     CRMSCA  
     BURIED  . . . . . . . .   16.07        104    93.7   111     CRMSCA  
     CORE  . . . . . . . . .   16.86        138    87.3   158     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   17.67        772    69.3  1114     CRMSMC  
     WELL ORDERED  . . . . .   17.51        688    72.4   950     CRMSMC  
     NO INTER CONTACTS . . .   18.08        692    70.9   976     CRMSMC  
     SHIFTED CHAIN . . . . .   17.87        668    70.5   948     CRMSMC  
     ALTERNATIVE PARENT  . .   19.02        296    66.5   445     CRMSMC  
     SECONDARY STRUCTURE . .   17.01        456    75.1   607     CRMSMC  
     SHIFTED SS UNITS  . . .   17.86         44    80.0    55     CRMSMC  
     LARGE SHIFTS/INSERTIONS   19.55        220    65.3   337     CRMSMC  
     SURFACE . . . . . . . .   19.37        356    62.8   567     CRMSMC  
     BURIED  . . . . . . . .   16.07        416    76.1   547     CRMSMC  
     CORE  . . . . . . . . .   16.86        552    71.0   777     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    0.00          0     0.0   889     CRMSSC  
     WELL ORDERED  . . . . .    0.00          0     0.0   623     CRMSSC  
     NO INTER CONTACTS . . .    0.00          0     0.0   769     CRMSSC  
     RELIABLE SIDE CHAINS  .    0.00          0     0.0   771     CRMSSC  
     CHANGED ANGLES  . . . .    0.00          0     0.0   462     CRMSSC  
     SECONDARY STRUCTURE . .    0.00          0     0.0   477     CRMSSC  
     LARGE SHIFTS/INSERTIONS    0.00          0     0.0   271     CRMSSC  
     SURFACE . . . . . . . .    0.00          0     0.0   465     CRMSSC  
     BURIED  . . . . . . . .    0.00          0     0.0   424     CRMSSC  
     CORE  . . . . . . . . .    0.00          0     0.0   618     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   17.67        772    43.1  1793     CRMSALL 
     WELL ORDERED  . . . . .   17.51        688    49.0  1403     CRMSALL 
     NO INTER CONTACTS . . .   18.08        692    44.3  1561     CRMSALL 
     SHIFTED CHAIN . . . . .   17.87        668    43.7  1529     CRMSALL 
     ALTERNATIVE PARENT  . .   19.02        296    41.9   707     CRMSALL 
     SECONDARY STRUCTURE . .   17.01        456    47.3   965     CRMSALL 
     LARGE SHIFTS/INSERTIONS   19.55        220    40.5   543     CRMSALL 
     SURFACE . . . . . . . .   19.37        356    38.5   925     CRMSALL 
     BURIED  . . . . . . . .   16.07        416    47.9   868     CRMSALL 
     CORE  . . . . . . . . .   16.86        552    44.2  1250     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1    17.33      3   100.0     3      26-AAF-28   
 CA  LOOP  2    15.04      3    42.9     7      52-STPDEKG-58   
 CA  LOOP  3    17.76      7   100.0     7      79-RILKDHQ-85   
 CA  LOOP  4    36.87      7    87.5     8      95-AWLRDDEE-102  
 CA  LOOP  5     0.00      0     0.0     4     128-NPNR-131  
 CA  LOOP  6    17.06     10   100.0    10     181-VLTAVLQDHG-190  
 CA  LOOP  7    14.58     11    91.7    12     204-EMAKIARDLFCS-215  
 CA  LOOP  8    10.17      5   100.0     5     228-AFAFI-232  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1    17.16     12    80.0    15      26-AAF-28   
 MC  LOOP  2    14.15     12    35.3    34      52-STPDEKG-58   
 MC  LOOP  3    17.95     28    80.0    35      79-RILKDHQ-85   
 MC  LOOP  4    36.42     28    70.0    40      95-AWLRDDEE-102  
 MC  LOOP  5     0.00      0     0.0    20     128-NPNR-131  
 MC  LOOP  6    17.12     40    81.6    49     181-VLTAVLQDHG-190  
 MC  LOOP  7    14.68     44    73.3    60     204-EMAKIARDLFCS-215  
 MC  LOOP  8    10.04     20    80.0    25     228-AFAFI-232  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1    17.16     12    57.1    21      26-AAF-28   
 ALL LOOP  2    14.15     12    24.0    50      52-STPDEKG-58   
 ALL LOOP  3    17.95     28    44.4    63      79-RILKDHQ-85   
 ALL LOOP  4    36.42     28    38.9    72      95-AWLRDDEE-102  
 ALL LOOP  5     0.00      0     0.0    34     128-NPNR-131  
 ALL LOOP  6    17.12     40    54.8    73     181-VLTAVLQDHG-190  
 ALL LOOP  7    14.68     44    46.8    94     204-EMAKIARDLFCS-215  
 ALL LOOP  8    10.04     20    50.0    40     228-AFAFI-232  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     0.43      3   100.0     3      26-AAF-28   
 CA  LOOP  2     0.88      3    42.9     7      52-STPDEKG-58   
 CA  LOOP  3     1.79      7   100.0     7      79-RILKDHQ-85   
 CA  LOOP  4     2.47      7    87.5     8      95-AWLRDDEE-102  
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 CA  LOOP  6     3.66     10   100.0    10     181-VLTAVLQDHG-190  
 CA  LOOP  7     2.17     11    91.7    12     204-EMAKIARDLFCS-215  
 CA  LOOP  8     0.14      5   100.0     5     228-AFAFI-232  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     1.74     12    80.0    15      26-AAF-28   
 MC  LOOP  2     1.37     12    35.3    34      52-STPDEKG-58   
 MC  LOOP  3     1.67     28    80.0    35      79-RILKDHQ-85   
 MC  LOOP  4     2.46     28    70.0    40      95-AWLRDDEE-102  
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 MC  LOOP  6     3.61     40    81.6    49     181-VLTAVLQDHG-190  
 MC  LOOP  7     2.17     44    73.3    60     204-EMAKIARDLFCS-215  
 MC  LOOP  8     0.62     20    80.0    25     228-AFAFI-232  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     1.74     12    57.1    21      26-AAF-28   
 ALL LOOP  2     1.37     12    24.0    50      52-STPDEKG-58   
 ALL LOOP  3     1.67     28    44.4    63      79-RILKDHQ-85   
 ALL LOOP  4     2.46     28    38.9    72      95-AWLRDDEE-102  
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 ALL LOOP  6     3.61     40    54.8    73     181-VLTAVLQDHG-190  
 ALL LOOP  7     2.17     44    46.8    94     204-EMAKIARDLFCS-215  
 ALL LOOP  8     0.62     20    50.0    40     228-AFAFI-232  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   15.802      1.000       0.500    193    85.4   226     ERRCA  
     WELL ORDERED  . . . . .   15.551      1.000       0.500    170    88.5   192     ERRCA  
     NO INTER CONTACTS . . .   16.185      1.000       0.500    173    87.4   198     ERRCA  
     SHIFTED CHAIN . . . . .   15.865      1.000       0.500    167    87.0   192     ERRCA  
     ALTERNATIVE PARENT  . .   17.320      1.000       0.500     74    82.2    90     ERRCA  
     SECONDARY STRUCTURE . .   15.289      1.000       0.500    114    93.4   122     ERRCA  
     LARGE SHIFTS/INSERTIONS   17.815      1.000       0.500     55    80.9    68     ERRCA  
     SURFACE . . . . . . . .   17.584      1.000       0.500     89    77.4   115     ERRCA  
     BURIED  . . . . . . . .   14.277      1.000       0.500    104    93.7   111     ERRCA  
     CORE  . . . . . . . . .   15.000      1.000       0.500    138    87.3   158     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   15.766      1.000       0.500    772    69.3  1114     ERRMC  
     WELL ORDERED  . . . . .   15.520      1.000       0.500    688    72.4   950     ERRMC  
     NO INTER CONTACTS . . .   16.125      1.000       0.500    692    70.9   976     ERRMC  
     SHIFTED CHAIN . . . . .   15.838      1.000       0.500    668    70.5   948     ERRMC  
     ALTERNATIVE PARENT  . .   17.303      1.000       0.500    296    66.5   445     ERRMC  
     SECONDARY STRUCTURE . .   15.353      1.000       0.500    456    75.1   607     ERRMC  
     LARGE SHIFTS/INSERTIONS   17.720      1.000       0.500    220    65.3   337     ERRMC  
     SURFACE . . . . . . . .   17.529      1.000       0.500    356    62.8   567     ERRMC  
     BURIED  . . . . . . . .   14.257      1.000       0.500    416    76.1   547     ERRMC  
     CORE  . . . . . . . . .   14.987      1.000       0.500    552    71.0   777     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.000      0.000       0.000      0     0.0   889     ERRSC  
     WELL ORDERED  . . . . .    0.000      0.000       0.000      0     0.0   623     ERRSC  
     NO INTER CONTACTS . . .    0.000      0.000       0.000      0     0.0   769     ERRSC  
     RELIABLE SIDE CHAINS  .    0.000      0.000       0.000      0     0.0   771     ERRSC  
     CHANGED ANGLES  . . . .    0.000      0.000       0.000      0     0.0   462     ERRSC  
     SHIFTED CHAIN . . . . .    0.000      0.000       0.000      0     0.0   761     ERRSC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0   347     ERRSC  
     SECONDARY STRUCTURE . .    0.000      0.000       0.000      0     0.0   477     ERRSC  
     LARGE SHIFTS/INSERTIONS    0.000      0.000       0.000      0     0.0   271     ERRSC  
     SURFACE . . . . . . . .    0.000      0.000       0.000      0     0.0   465     ERRSC  
     BURIED  . . . . . . . .    0.000      0.000       0.000      0     0.0   424     ERRSC  
     CORE  . . . . . . . . .    0.000      0.000       0.000      0     0.0   618     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   15.766      1.000       0.500    772    43.1  1793     ERRALL 
     WELL ORDERED  . . . . .   15.520      1.000       0.500    688    49.0  1403     ERRALL 
     NO INTER CONTACTS . . .   16.125      1.000       0.500    692    44.3  1561     ERRALL 
     SHIFTED CHAIN . . . . .   15.838      1.000       0.500    668    43.7  1529     ERRALL 
     ALTERNATIVE PARENT  . .   17.303      1.000       0.500    296    41.9   707     ERRALL 
     SECONDARY STRUCTURE . .   15.353      1.000       0.500    456    47.3   965     ERRALL 
     LARGE SHIFTS/INSERTIONS   17.720      1.000       0.500    220    40.5   543     ERRALL 
     SURFACE . . . . . . . .   17.529      1.000       0.500    356    38.5   925     ERRALL 
     BURIED  . . . . . . . .   14.257      1.000       0.500    416    47.9   868     ERRALL 
     CORE  . . . . . . . . .   14.987      1.000       0.500    552    44.2  1250     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         8         9        14        44     193     226   DISTCA 
CA  (P)      0.00      3.54      3.98      6.19     19.47             226   DISTCA 
CA  (RMS)    0.00      1.27      1.51      2.97      6.28                   DISTCA 
 
ALL (N)         2        19        32        64       178     772    1793   DISTALL 
ALL (P)      0.11      1.06      1.78      3.57      9.93            1793   DISTALL 
ALL (RMS)    0.65      1.30      1.96      3.21      6.37                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         158           138            55          RMSLSI 
CA  (P)       69.91         61.06         24.34          RMSLSI 
CA  (RMS)      1.56         16.86         19.68          RMSLSI 
 
 
 
END of the results output 
