 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0055.inter 
CONANA-PAIR            ../CONANA/T0055.pair 
# 
NUMBER-OF-PARENTS      4 
ALIGNMENT-DALI(1)      ../PARENTS/casp3.T0055.1esl.rot 
ALIGNMENT-DALI(2)      ../PARENTS/casp3.T0055.1lit.rot 
ALIGNMENT-DALI(3)      ../PARENTS/casp3.T0055.1rtm_1.rot 
ALIGNMENT-DALI(4)      ../PARENTS/casp3.T0055.1htn.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 966 atoms, MODEL 982 atoms, 966 common with TARGET 
           Number of atoms possible to evaluate: 933 
 
 
 CA-RMS TARGET<->PARENT(1esl)	 2.181936 
 
 CA-RMS TARGET<->PARENT(1lit)	 3.321523 
 
 CA-RMS TARGET<->PARENT(1rtm-1)	 2.161827 
 
 CA-RMS TARGET<->PARENT(1htn)	 1.879763 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    58.92           70.9   234    95.9   244     ARMSMC  
     WELL ORDERED  . . . . .    59.80           70.0   227    96.6   235     ARMSMC  
     NO INTER CONTACTS . . .    55.91           73.3   161    98.2   164     ARMSMC  
     SHIFTED CHAIN . . . . .    69.80           58.6   140    93.3   150     ARMSMC  
     ALTERNATIVE PARENT  . .    73.53           50.0    38    82.6    46     ARMSMC  
     SECONDARY STRUCTURE . .    31.70           85.1   114   100.0   114     ARMSMC  
     LARGE SHIFTS/INSERTIONS    77.74           52.9    70    89.7    78     ARMSMC  
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSMC  
     SURFACE . . . . . . . .    66.47           62.8   129    93.5   138     ARMSMC  
     BURIED  . . . . . . . .    48.05           81.0   105    99.1   106     ARMSMC  
     CORE  . . . . . . . . .    48.72           78.7   164    98.8   166     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    75.88           57.4   101    96.2   105     ARMSSC1 
     WELL ORDERED  . . . . .    75.01           57.7    97    97.0   100     ARMSSC1 
     NO INTER CONTACTS . . .    73.27           60.6    66    98.5    67     ARMSSC1 
     RELIABLE SIDE CHAINS  .    75.25           58.1    93    95.9    97     ARMSSC1 
     CHANGED ANGLES  . . . .    86.42           43.9    57    96.6    59     ARMSSC1 
     SHIFTED CHAIN . . . . .    82.71           47.6    63    94.0    67     ARMSSC1 
     ALTERNATIVE PARENT  . .    92.66           37.5    16    80.0    20     ARMSSC1 
     SECONDARY STRUCTURE . .    76.45           56.0    50   100.0    50     ARMSSC1 
     LARGE SHIFTS/INSERTIONS    84.83           45.2    31    88.6    35     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .    81.39           50.9    53    93.0    57     ARMSSC1 
     BURIED  . . . . . . . .    69.28           64.6    48   100.0    48     ARMSSC1 
     CORE  . . . . . . . . .    71.55           62.9    70   100.0    70     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    58.46           64.4    73    94.8    77     ARMSSC2 
     WELL ORDERED  . . . . .    57.99           64.3    70    95.9    73     ARMSSC2 
     NO INTER CONTACTS . . .    59.26           65.9    44    97.8    45     ARMSSC2 
     RELIABLE SIDE CHAINS  .    52.79           69.1    55    94.8    58     ARMSSC2 
     CHANGED ANGLES  . . . .    63.31           61.2    49    92.5    53     ARMSSC2 
     SHIFTED CHAIN . . . . .    56.89           66.0    47    92.2    51     ARMSSC2 
     ALTERNATIVE PARENT  . .    68.89           53.8    13    76.5    17     ARMSSC2 
     SECONDARY STRUCTURE . .    60.45           68.6    35   100.0    35     ARMSSC2 
     LARGE SHIFTS/INSERTIONS    66.34           42.9    21    84.0    25     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .    65.37           56.4    39    90.7    43     ARMSSC2 
     BURIED  . . . . . . . .    49.36           73.5    34   100.0    34     ARMSSC2 
     CORE  . . . . . . . . .    54.96           73.1    52   100.0    52     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    73.53           54.5    22    95.7    23     ARMSSC3 
     WELL ORDERED  . . . . .    73.21           57.9    19    95.0    20     ARMSSC3 
     NO INTER CONTACTS . . .    71.25           63.6    11   100.0    11     ARMSSC3 
     RELIABLE SIDE CHAINS  .    71.30           61.1    18   100.0    18     ARMSSC3 
     CHANGED ANGLES  . . . .    69.36           55.6    18    94.7    19     ARMSSC3 
     SHIFTED CHAIN . . . . .    71.45           57.1    14    93.3    15     ARMSSC3 
     ALTERNATIVE PARENT  . .    76.98           75.0     4    80.0     5     ARMSSC3 
     SECONDARY STRUCTURE . .    56.19           64.3    14   100.0    14     ARMSSC3 
     LARGE SHIFTS/INSERTIONS   100.05           28.6     7    87.5     8     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .    76.22           46.2    13    92.9    14     ARMSSC3 
     BURIED  . . . . . . . .    69.47           66.7     9   100.0     9     ARMSSC3 
     CORE  . . . . . . . . .    57.09           66.7    15   100.0    15     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    76.80           37.5     8   100.0     8     ARMSSC4 
     WELL ORDERED  . . . . .    69.96           42.9     7   100.0     7     ARMSSC4 
     NO INTER CONTACTS . . .    93.16            0.0     4   100.0     4     ARMSSC4 
     RELIABLE SIDE CHAINS  .    76.80           37.5     8   100.0     8     ARMSSC4 
     CHANGED ANGLES  . . . .    81.70           28.6     7   100.0     7     ARMSSC4 
     SHIFTED CHAIN . . . . .    74.75           25.0     4   100.0     4     ARMSSC4 
     ALTERNATIVE PARENT  . .    77.47           50.0     2   100.0     2     ARMSSC4 
     SECONDARY STRUCTURE . .    71.51           40.0     5   100.0     5     ARMSSC4 
     LARGE SHIFTS/INSERTIONS    53.86           66.7     3   100.0     3     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .    76.68           33.3     6   100.0     6     ARMSSC4 
     BURIED  . . . . . . . .    77.15           50.0     2   100.0     2     ARMSSC4 
     CORE  . . . . . . . . .    87.73           20.0     5   100.0     5     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =  -0.85109     r(1,2) =   0.36633     r(1,3) =   0.37611 
 r(2,1) =   0.52317     r(2,2) =   0.53161     r(2,3) =   0.66609 
 r(3,1) =   0.04406     r(3,2) =   0.76367     r(3,3) =  -0.64410 
THE OFFSET VECTOR: 
 v(1) =  56.31558     v(2) =  -1.14165     v(3) =  43.17349 
 
 Number of iteration 34                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.07           (Number of atoms:   73) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    3.95        119    96.7   123     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0332                            CRMSCA  
     WELL ORDERED  . . . . .    4.00        116    97.5   119     CRMSCA  
     NO INTER CONTACTS . . .    3.95         81    98.8    82     CRMSCA  
     SHIFTED CHAIN . . . . .    4.92         72    94.7    76     CRMSCA  
     ALTERNATIVE PARENT  . .    5.37         20    83.3    24     CRMSCA  
     SECONDARY STRUCTURE . .    3.21         57   100.0    57     CRMSCA  
     SHIFTED SS UNITS  . . .    5.78         10   100.0    10     CRMSCA  
     LARGE SHIFTS/INSERTIONS    5.71         36    90.0    40     CRMSCA  
     SURFACE . . . . . . . .    4.44         66    94.3    70     CRMSCA  
     BURIED  . . . . . . . .    3.23         53   100.0    53     CRMSCA  
     CORE  . . . . . . . . .    2.87         83   100.0    83     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    4.05        586    96.7   606     CRMSMC  
     WELL ORDERED  . . . . .    4.10        569    97.4   584     CRMSMC  
     NO INTER CONTACTS . . .    4.10        397    98.8   402     CRMSMC  
     SHIFTED CHAIN . . . . .    5.02        355    94.7   375     CRMSMC  
     ALTERNATIVE PARENT  . .    5.51         97    82.9   117     CRMSMC  
     SECONDARY STRUCTURE . .    3.26        283   100.0   283     CRMSMC  
     SHIFTED SS UNITS  . . .    5.81         50   100.0    50     CRMSMC  
     LARGE SHIFTS/INSERTIONS    5.83        177    89.8   197     CRMSMC  
     SURFACE . . . . . . . .    4.56        322    94.2   342     CRMSMC  
     BURIED  . . . . . . . .    3.31        264   100.0   264     CRMSMC  
     CORE  . . . . . . . . .    2.96        409   100.0   409     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    6.29        457    96.4   474     CRMSSC  
     WELL ORDERED  . . . . .    6.39        438    97.1   451     CRMSSC  
     NO INTER CONTACTS . . .    6.22        289    98.6   293     CRMSSC  
     RELIABLE SIDE CHAINS  .    6.16        395    96.8   408     CRMSSC  
     CHANGED ANGLES  . . . .    7.30        231    95.5   242     CRMSSC  
     SECONDARY STRUCTURE . .    5.10        235   100.0   235     CRMSSC  
     LARGE SHIFTS/INSERTIONS    8.95        141    89.2   158     CRMSSC  
     SURFACE . . . . . . . .    7.00        233    93.2   250     CRMSSC  
     BURIED  . . . . . . . .    5.45        224   100.0   224     CRMSSC  
     CORE  . . . . . . . . .    4.63        316   100.0   316     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    5.18        933    96.6   966     CRMSALL 
     WELL ORDERED  . . . . .    5.25        901    97.3   926     CRMSALL 
     NO INTER CONTACTS . . .    5.13        613    98.7   621     CRMSALL 
     SHIFTED CHAIN . . . . .    6.30        570    94.5   603     CRMSALL 
     ALTERNATIVE PARENT  . .    7.23        158    82.7   191     CRMSALL 
     SECONDARY STRUCTURE . .    4.21        463   100.0   463     CRMSALL 
     LARGE SHIFTS/INSERTIONS    7.41        285    89.6   318     CRMSALL 
     SURFACE . . . . . . . .    5.74        497    93.8   530     CRMSALL 
     BURIED  . . . . . . . .    4.46        436   100.0   436     CRMSALL 
     CORE  . . . . . . . . .    3.81        648   100.0   648     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     5.75      9   100.0     9      31-SAMRDSTMV-39   
 CA  LOOP  2     5.50      7   100.0     7      45-FTEVKGH-51   
 CA  LOOP  3     6.90      3    50.0     6      60-LQDGAY-65   
 CA  LOOP  4     7.25      5   100.0     5      76-PTDSD-80   
 CA  LOOP  5     5.21      4   100.0     4      90-PQSW-93   
 CA  LOOP  6     5.34      5   100.0     5     100-WSKYN-104  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     5.83     45   100.0    45      31-SAMRDSTMV-39   
 MC  LOOP  2     5.70     34   100.0    34      45-FTEVKGH-51   
 MC  LOOP  3     6.95     14    48.3    29      60-LQDGAY-65   
 MC  LOOP  4     7.39     25   100.0    25      76-PTDSD-80   
 MC  LOOP  5     5.46     20   100.0    20      90-PQSW-93   
 MC  LOOP  6     5.33     25   100.0    25     100-WSKYN-104  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     7.91     66   100.0    66      31-SAMRDSTMV-39   
 ALL LOOP  2     7.18     57   100.0    57      45-FTEVKGH-51   
 ALL LOOP  3    10.31     21    45.7    46      60-LQDGAY-65   
 ALL LOOP  4     7.94     36   100.0    36      76-PTDSD-80   
 ALL LOOP  5     7.36     36   100.0    36      90-PQSW-93   
 ALL LOOP  6     6.30     49   100.0    49     100-WSKYN-104  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     4.07      9   100.0     9      31-SAMRDSTMV-39   
 CA  LOOP  2     3.32      7   100.0     7      45-FTEVKGH-51   
 CA  LOOP  3     0.26      3    50.0     6      60-LQDGAY-65   
 CA  LOOP  4     2.21      5   100.0     5      76-PTDSD-80   
 CA  LOOP  5     1.99      4   100.0     4      90-PQSW-93   
 CA  LOOP  6     1.01      5   100.0     5     100-WSKYN-104  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     4.39     45   100.0    45      31-SAMRDSTMV-39   
 MC  LOOP  2     3.52     34   100.0    34      45-FTEVKGH-51   
 MC  LOOP  3     1.17     14    48.3    29      60-LQDGAY-65   
 MC  LOOP  4     2.72     25   100.0    25      76-PTDSD-80   
 MC  LOOP  5     2.62     20   100.0    20      90-PQSW-93   
 MC  LOOP  6     1.15     25   100.0    25     100-WSKYN-104  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     6.21     66   100.0    66      31-SAMRDSTMV-39   
 ALL LOOP  2     5.75     57   100.0    57      45-FTEVKGH-51   
 ALL LOOP  3     2.30     21    45.7    46      60-LQDGAY-65   
 ALL LOOP  4     3.98     36   100.0    36      76-PTDSD-80   
 ALL LOOP  5     5.48     36   100.0    36      90-PQSW-93   
 ALL LOOP  6     3.02     49   100.0    49     100-WSKYN-104  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    2.884      1.000       0.500    119    96.7   123     ERRCA  
     WELL ORDERED  . . . . .    2.945      1.000       0.500    116    97.5   119     ERRCA  
     NO INTER CONTACTS . . .    2.762      1.000       0.500     81    98.8    82     ERRCA  
     SHIFTED CHAIN . . . . .    4.134      1.000       0.500     72    94.7    76     ERRCA  
     ALTERNATIVE PARENT  . .    4.721      1.000       0.500     20    83.3    24     ERRCA  
     SECONDARY STRUCTURE . .    2.149      1.000       0.500     57   100.0    57     ERRCA  
     LARGE SHIFTS/INSERTIONS    5.190      1.000       0.500     36    90.0    40     ERRCA  
     SURFACE . . . . . . . .    3.462      1.000       0.500     66    94.3    70     ERRCA  
     BURIED  . . . . . . . .    2.165      1.000       0.500     53   100.0    53     ERRCA  
     CORE  . . . . . . . . .    1.884      1.000       0.500     83   100.0    83     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    2.962      1.000       0.500    586    96.7   606     ERRMC  
     WELL ORDERED  . . . . .    3.025      1.000       0.500    569    97.4   584     ERRMC  
     NO INTER CONTACTS . . .    2.881      1.000       0.500    397    98.8   402     ERRMC  
     SHIFTED CHAIN . . . . .    4.209      1.000       0.500    355    94.7   375     ERRMC  
     ALTERNATIVE PARENT  . .    4.827      1.000       0.500     97    82.9   117     ERRMC  
     SECONDARY STRUCTURE . .    2.190      1.000       0.500    283   100.0   283     ERRMC  
     LARGE SHIFTS/INSERTIONS    5.281      1.000       0.500    177    89.8   197     ERRMC  
     SURFACE . . . . . . . .    3.564      1.000       0.500    322    94.2   342     ERRMC  
     BURIED  . . . . . . . .    2.227      1.000       0.500    264   100.0   264     ERRMC  
     CORE  . . . . . . . . .    1.958      1.000       0.500    409   100.0   409     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    4.797      1.000       0.500    457    96.4   474     ERRSC  
     WELL ORDERED  . . . . .    4.900      1.000       0.500    438    97.1   451     ERRSC  
     NO INTER CONTACTS . . .    4.512      1.000       0.500    289    98.6   293     ERRSC  
     RELIABLE SIDE CHAINS  .    4.652      1.000       0.500    395    96.8   408     ERRSC  
     CHANGED ANGLES  . . . .    5.974      1.000       0.500    231    95.5   242     ERRSC  
     SHIFTED CHAIN . . . . .    6.378      1.000       0.500    282    94.3   299     ERRSC  
     ALTERNATIVE PARENT  . .    8.002      1.000       0.500     78    82.1    95     ERRSC  
     SECONDARY STRUCTURE . .    3.690      1.000       0.500    235   100.0   235     ERRSC  
     LARGE SHIFTS/INSERTIONS    8.228      1.000       0.500    141    89.2   158     ERRSC  
     SURFACE . . . . . . . .    5.864      1.000       0.500    233    93.2   250     ERRSC  
     BURIED  . . . . . . . .    3.686      1.000       0.500    224   100.0   224     ERRSC  
     CORE  . . . . . . . . .    3.266      1.000       0.500    316   100.0   316     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    3.781      1.000       0.500    933    96.6   966     ERRALL 
     WELL ORDERED  . . . . .    3.853      1.000       0.500    901    97.3   926     ERRALL 
     NO INTER CONTACTS . . .    3.576      1.000       0.500    613    98.7   621     ERRALL 
     SHIFTED CHAIN . . . . .    5.174      1.000       0.500    570    94.5   603     ERRALL 
     ALTERNATIVE PARENT  . .    6.249      1.000       0.500    158    82.7   191     ERRALL 
     SECONDARY STRUCTURE . .    2.885      1.000       0.500    463   100.0   463     ERRALL 
     LARGE SHIFTS/INSERTIONS    6.584      1.000       0.500    285    89.6   318     ERRALL 
     SURFACE . . . . . . . .    4.543      1.000       0.500    497    93.8   530     ERRALL 
     BURIED  . . . . . . . .    2.913      1.000       0.500    436   100.0   436     ERRALL 
     CORE  . . . . . . . . .    2.549      1.000       0.500    648   100.0   648     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        48        69        74        87       119     119     123   DISTCA 
CA  (P)     39.02     56.10     60.16     70.73     96.75             123   DISTCA 
CA  (RMS)    0.62      0.94      1.09      1.99      3.95                   DISTCA 
 
ALL (N)       299       438       503       618       881     933     966   DISTALL 
ALL (P)     30.95     45.34     52.07     63.98     91.20             966   DISTALL 
ALL (RMS)    0.64      0.97      1.26      2.11      4.33                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)          83            83            36          RMSLSI 
CA  (P)       67.48         67.48         29.27          RMSLSI 
CA  (RMS)      1.17          2.87          5.71          RMSLSI 
 
 
 
END of the results output 
