 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0055.inter 
CONANA-PAIR            ../CONANA/T0055.pair 
# 
NUMBER-OF-PARENTS      4 
ALIGNMENT-DALI(1)      ../PARENTS/casp3.T0055.1esl.rot 
ALIGNMENT-DALI(2)      ../PARENTS/casp3.T0055.1lit.rot 
ALIGNMENT-DALI(3)      ../PARENTS/casp3.T0055.1rtm_1.rot 
ALIGNMENT-DALI(4)      ../PARENTS/casp3.T0055.1htn.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 966 atoms, MODEL 982 atoms, 966 common with TARGET 
           Number of atoms possible to evaluate: 946 
 
 
 CA-RMS TARGET<->PARENT(1esl)	 2.181936 
 
 CA-RMS TARGET<->PARENT(1lit)	 3.321523 
 
 CA-RMS TARGET<->PARENT(1rtm-1)	 2.161827 
 
 CA-RMS TARGET<->PARENT(1htn)	 1.879763 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    67.24           59.6   240    98.4   244     ARMSMC  
     WELL ORDERED  . . . . .    65.90           60.6   231    98.3   235     ARMSMC  
     NO INTER CONTACTS . . .    63.97           58.5   164   100.0   164     ARMSMC  
     SHIFTED CHAIN . . . . .    79.42           47.9   146    97.3   150     ARMSMC  
     ALTERNATIVE PARENT  . .    93.16           31.1    45    97.8    46     ARMSMC  
     SECONDARY STRUCTURE . .    46.38           71.2   111    97.4   114     ARMSMC  
     LARGE SHIFTS/INSERTIONS    94.68           37.7    77    98.7    78     ARMSMC  
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSMC  
     SURFACE . . . . . . . .    77.12           52.9   136    98.6   138     ARMSMC  
     BURIED  . . . . . . . .    51.53           68.3   104    98.1   106     ARMSMC  
     CORE  . . . . . . . . .    49.21           69.9   163    98.2   166     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    69.27           59.2   103    98.1   105     ARMSSC1 
     WELL ORDERED  . . . . .    70.85           58.2    98    98.0   100     ARMSSC1 
     NO INTER CONTACTS . . .    71.30           56.7    67   100.0    67     ARMSSC1 
     RELIABLE SIDE CHAINS  .    69.50           58.9    95    97.9    97     ARMSSC1 
     CHANGED ANGLES  . . . .    86.92           38.6    57    96.6    59     ARMSSC1 
     SHIFTED CHAIN . . . . .    75.12           50.8    65    97.0    67     ARMSSC1 
     ALTERNATIVE PARENT  . .    75.53           47.4    19    95.0    20     ARMSSC1 
     SECONDARY STRUCTURE . .    66.23           65.3    49    98.0    50     ARMSSC1 
     LARGE SHIFTS/INSERTIONS    83.55           41.2    34    97.1    35     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .    71.19           58.9    56    98.2    57     ARMSSC1 
     BURIED  . . . . . . . .    66.91           59.6    47    97.9    48     ARMSSC1 
     CORE  . . . . . . . . .    61.01           68.1    69    98.6    70     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    68.43           48.0    75    97.4    77     ARMSSC2 
     WELL ORDERED  . . . . .    68.78           47.9    71    97.3    73     ARMSSC2 
     NO INTER CONTACTS . . .    69.76           48.9    45   100.0    45     ARMSSC2 
     RELIABLE SIDE CHAINS  .    58.77           57.1    56    96.6    58     ARMSSC2 
     CHANGED ANGLES  . . . .    77.69           35.3    51    96.2    53     ARMSSC2 
     SHIFTED CHAIN . . . . .    68.02           42.9    49    96.1    51     ARMSSC2 
     ALTERNATIVE PARENT  . .    43.79           62.5    16    94.1    17     ARMSSC2 
     SECONDARY STRUCTURE . .    63.10           61.8    34    97.1    35     ARMSSC2 
     LARGE SHIFTS/INSERTIONS    65.67           45.8    24    96.0    25     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .    71.03           42.9    42    97.7    43     ARMSSC2 
     BURIED  . . . . . . . .    64.98           54.5    33    97.1    34     ARMSSC2 
     CORE  . . . . . . . . .    69.70           49.0    51    98.1    52     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    62.64           52.2    23   100.0    23     ARMSSC3 
     WELL ORDERED  . . . . .    64.18           50.0    20   100.0    20     ARMSSC3 
     NO INTER CONTACTS . . .    57.99           54.5    11   100.0    11     ARMSSC3 
     RELIABLE SIDE CHAINS  .    53.10           61.1    18   100.0    18     ARMSSC3 
     CHANGED ANGLES  . . . .    68.60           42.1    19   100.0    19     ARMSSC3 
     SHIFTED CHAIN . . . . .    68.83           40.0    15   100.0    15     ARMSSC3 
     ALTERNATIVE PARENT  . .    57.86           40.0     5   100.0     5     ARMSSC3 
     SECONDARY STRUCTURE . .    49.13           64.3    14   100.0    14     ARMSSC3 
     LARGE SHIFTS/INSERTIONS    92.91           25.0     8   100.0     8     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .    74.92           35.7    14   100.0    14     ARMSSC3 
     BURIED  . . . . . . . .    35.97           77.8     9   100.0     9     ARMSSC3 
     CORE  . . . . . . . . .    37.57           66.7    15   100.0    15     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .   107.02           25.0     8   100.0     8     ARMSSC4 
     WELL ORDERED  . . . . .    98.34           28.6     7   100.0     7     ARMSSC4 
     NO INTER CONTACTS . . .   108.88            0.0     4   100.0     4     ARMSSC4 
     RELIABLE SIDE CHAINS  .   107.02           25.0     8   100.0     8     ARMSSC4 
     CHANGED ANGLES  . . . .    92.22           28.6     7   100.0     7     ARMSSC4 
     SHIFTED CHAIN . . . . .    62.86           25.0     4   100.0     4     ARMSSC4 
     ALTERNATIVE PARENT  . .    77.78           50.0     2   100.0     2     ARMSSC4 
     SECONDARY STRUCTURE . .   114.53           20.0     5   100.0     5     ARMSSC4 
     LARGE SHIFTS/INSERTIONS    26.61           66.7     3   100.0     3     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .    81.39           33.3     6   100.0     6     ARMSSC4 
     BURIED  . . . . . . . .   161.05            0.0     2   100.0     2     ARMSSC4 
     CORE  . . . . . . . . .   133.79            0.0     5   100.0     5     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =   0.74549     r(1,2) =   0.32012     r(1,3) =  -0.58460 
 r(2,1) =  -0.07962     r(2,2) =  -0.82805     r(2,3) =  -0.55497 
 r(3,1) =  -0.66174     r(3,2) =   0.46027     r(3,3) =  -0.59182 
THE OFFSET VECTOR: 
 v(1) = -12.37387     v(2) = 130.18747     v(3) =  31.78145 
 
 Number of iteration 52                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.27           (Number of atoms:   77) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    4.24        121    98.4   123     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0350                            CRMSCA  
     WELL ORDERED  . . . . .    4.28        117    98.3   119     CRMSCA  
     NO INTER CONTACTS . . .    4.02         82   100.0    82     CRMSCA  
     SHIFTED CHAIN . . . . .    5.30         74    97.4    76     CRMSCA  
     ALTERNATIVE PARENT  . .    5.85         23    95.8    24     CRMSCA  
     SECONDARY STRUCTURE . .    4.26         56    98.2    57     CRMSCA  
     SHIFTED SS UNITS  . . .    7.14         10   100.0    10     CRMSCA  
     LARGE SHIFTS/INSERTIONS    6.35         39    97.5    40     CRMSCA  
     SURFACE . . . . . . . .    4.91         69    98.6    70     CRMSCA  
     BURIED  . . . . . . . .    3.12         52    98.1    53     CRMSCA  
     CORE  . . . . . . . . .    2.70         82    98.8    83     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    4.28        596    98.3   606     CRMSMC  
     WELL ORDERED  . . . . .    4.32        574    98.3   584     CRMSMC  
     NO INTER CONTACTS . . .    4.10        402   100.0   402     CRMSMC  
     SHIFTED CHAIN . . . . .    5.34        365    97.3   375     CRMSMC  
     ALTERNATIVE PARENT  . .    5.88        112    95.7   117     CRMSMC  
     SECONDARY STRUCTURE . .    4.27        278    98.2   283     CRMSMC  
     SHIFTED SS UNITS  . . .    7.13         50   100.0    50     CRMSMC  
     LARGE SHIFTS/INSERTIONS    6.41        192    97.5   197     CRMSMC  
     SURFACE . . . . . . . .    4.98        337    98.5   342     CRMSMC  
     BURIED  . . . . . . . .    3.15        259    98.1   264     CRMSMC  
     CORE  . . . . . . . . .    2.74        404    98.8   409     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    6.01        462    97.5   474     CRMSSC  
     WELL ORDERED  . . . . .    6.12        439    97.3   451     CRMSSC  
     NO INTER CONTACTS . . .    6.11        293   100.0   293     CRMSSC  
     RELIABLE SIDE CHAINS  .    5.98        396    97.1   408     CRMSSC  
     CHANGED ANGLES  . . . .    7.10        232    95.9   242     CRMSSC  
     SECONDARY STRUCTURE . .    5.39        227    96.6   235     CRMSSC  
     LARGE SHIFTS/INSERTIONS    9.05        154    97.5   158     CRMSSC  
     SURFACE . . . . . . . .    7.10        246    98.4   250     CRMSSC  
     BURIED  . . . . . . . .    4.47        216    96.4   224     CRMSSC  
     CORE  . . . . . . . . .    3.65        308    97.5   316     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    5.13        946    97.9   966     CRMSALL 
     WELL ORDERED  . . . . .    5.20        906    97.8   926     CRMSALL 
     NO INTER CONTACTS . . .    5.08        621   100.0   621     CRMSALL 
     SHIFTED CHAIN . . . . .    6.33        583    96.7   603     CRMSALL 
     ALTERNATIVE PARENT  . .    7.09        183    95.8   191     CRMSALL 
     SECONDARY STRUCTURE . .    4.79        451    97.4   463     CRMSALL 
     LARGE SHIFTS/INSERTIONS    7.73        310    97.5   318     CRMSALL 
     SURFACE . . . . . . . .    5.99        522    98.5   530     CRMSALL 
     BURIED  . . . . . . . .    3.83        424    97.2   436     CRMSALL 
     CORE  . . . . . . . . .    3.18        636    98.1   648     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     6.74      9   100.0     9      31-SAMRDSTMV-39   
 CA  LOOP  2     8.74      7   100.0     7      45-FTEVKGH-51   
 CA  LOOP  3     7.10      6   100.0     6      60-LQDGAY-65   
 CA  LOOP  4     5.44      5   100.0     5      76-PTDSD-80   
 CA  LOOP  5     4.87      4   100.0     4      90-PQSW-93   
 CA  LOOP  6     2.87      5   100.0     5     100-WSKYN-104  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     6.80     45   100.0    45      31-SAMRDSTMV-39   
 MC  LOOP  2     8.91     34   100.0    34      45-FTEVKGH-51   
 MC  LOOP  3     6.93     29   100.0    29      60-LQDGAY-65   
 MC  LOOP  4     5.56     25   100.0    25      76-PTDSD-80   
 MC  LOOP  5     5.12     20   100.0    20      90-PQSW-93   
 MC  LOOP  6     2.82     25   100.0    25     100-WSKYN-104  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     8.16     66   100.0    66      31-SAMRDSTMV-39   
 ALL LOOP  2    10.45     57   100.0    57      45-FTEVKGH-51   
 ALL LOOP  3     8.86     46   100.0    46      60-LQDGAY-65   
 ALL LOOP  4     5.90     36   100.0    36      76-PTDSD-80   
 ALL LOOP  5     7.53     36   100.0    36      90-PQSW-93   
 ALL LOOP  6     3.06     49   100.0    49     100-WSKYN-104  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     3.50      9   100.0     9      31-SAMRDSTMV-39   
 CA  LOOP  2     3.06      7   100.0     7      45-FTEVKGH-51   
 CA  LOOP  3     1.25      6   100.0     6      60-LQDGAY-65   
 CA  LOOP  4     2.45      5   100.0     5      76-PTDSD-80   
 CA  LOOP  5     1.98      4   100.0     4      90-PQSW-93   
 CA  LOOP  6     0.36      5   100.0     5     100-WSKYN-104  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     3.62     45   100.0    45      31-SAMRDSTMV-39   
 MC  LOOP  2     3.28     34   100.0    34      45-FTEVKGH-51   
 MC  LOOP  3     1.87     29   100.0    29      60-LQDGAY-65   
 MC  LOOP  4     2.95     25   100.0    25      76-PTDSD-80   
 MC  LOOP  5     2.81     20   100.0    20      90-PQSW-93   
 MC  LOOP  6     1.22     25   100.0    25     100-WSKYN-104  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     4.95     66   100.0    66      31-SAMRDSTMV-39   
 ALL LOOP  2     5.65     57   100.0    57      45-FTEVKGH-51   
 ALL LOOP  3     3.79     46   100.0    46      60-LQDGAY-65   
 ALL LOOP  4     3.88     36   100.0    36      76-PTDSD-80   
 ALL LOOP  5     5.77     36   100.0    36      90-PQSW-93   
 ALL LOOP  6     1.86     49   100.0    49     100-WSKYN-104  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    6.038      0.569       0.585    121    98.4   123     ERRCA  
     WELL ORDERED  . . . . .    6.007      0.565       0.581    117    98.3   119     ERRCA  
     NO INTER CONTACTS . . .    6.257      0.600       0.613     82   100.0    82     ERRCA  
     SHIFTED CHAIN . . . . .    4.770      0.410       0.428     74    97.4    76     ERRCA  
     ALTERNATIVE PARENT  . .    4.143      0.330       0.364     23    95.8    24     ERRCA  
     SECONDARY STRUCTURE . .    6.489      0.630       0.637     56    98.2    57     ERRCA  
     LARGE SHIFTS/INSERTIONS    3.622      0.277       0.288     39    97.5    40     ERRCA  
     SURFACE . . . . . . . .    5.390      0.487       0.507     69    98.6    70     ERRCA  
     BURIED  . . . . . . . .    6.898      0.677       0.688     52    98.1    53     ERRCA  
     CORE  . . . . . . . . .    7.188      0.707       0.726     82    98.8    83     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    6.007      0.563       0.581    596    98.3   606     ERRMC  
     WELL ORDERED  . . . . .    5.980      0.561       0.578    574    98.3   584     ERRMC  
     NO INTER CONTACTS . . .    6.205      0.592       0.606    402   100.0   402     ERRMC  
     SHIFTED CHAIN . . . . .    4.775      0.410       0.428    365    97.3   375     ERRMC  
     ALTERNATIVE PARENT  . .    4.218      0.339       0.366    112    95.7   117     ERRMC  
     SECONDARY STRUCTURE . .    6.468      0.625       0.633    278    98.2   283     ERRMC  
     LARGE SHIFTS/INSERTIONS    3.594      0.275       0.288    192    97.5   197     ERRMC  
     SURFACE . . . . . . . .    5.358      0.482       0.502    337    98.5   342     ERRMC  
     BURIED  . . . . . . . .    6.852      0.669       0.683    259    98.1   264     ERRMC  
     CORE  . . . . . . . . .    7.154      0.700       0.720    404    98.8   409     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.546      0.494       0.512    462    97.5   474     ERRSC  
     WELL ORDERED  . . . . .    5.525      0.493       0.509    439    97.3   451     ERRSC  
     NO INTER CONTACTS . . .    5.777      0.520       0.533    293   100.0   293     ERRSC  
     RELIABLE SIDE CHAINS  .    5.648      0.506       0.523    396    97.1   408     ERRSC  
     CHANGED ANGLES  . . . .    4.884      0.399       0.420    232    95.9   242     ERRSC  
     SHIFTED CHAIN . . . . .    4.417      0.357       0.367    287    96.0   299     ERRSC  
     ALTERNATIVE PARENT  . .    3.796      0.278       0.277     91    95.8    95     ERRSC  
     SECONDARY STRUCTURE . .    6.148      0.564       0.586    227    96.6   235     ERRSC  
     LARGE SHIFTS/INSERTIONS    3.494      0.234       0.222    154    97.5   158     ERRSC  
     SURFACE . . . . . . . .    4.610      0.377       0.392    246    98.4   250     ERRSC  
     BURIED  . . . . . . . .    6.612      0.628       0.649    216    96.4   224     ERRSC  
     CORE  . . . . . . . . .    6.572      0.625       0.657    308    97.5   316     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.815      0.533       0.551    946    97.9   966     ERRALL 
     WELL ORDERED  . . . . .    5.794      0.531       0.548    906    97.8   926     ERRALL 
     NO INTER CONTACTS . . .    6.042      0.562       0.576    621   100.0   621     ERRALL 
     SHIFTED CHAIN . . . . .    4.644      0.389       0.403    583    96.7   603     ERRALL 
     ALTERNATIVE PARENT  . .    4.055      0.313       0.328    183    95.8   191     ERRALL 
     SECONDARY STRUCTURE . .    6.326      0.597       0.612    451    97.4   463     ERRALL 
     LARGE SHIFTS/INSERTIONS    3.616      0.262       0.263    310    97.5   318     ERRALL 
     SURFACE . . . . . . . .    5.046      0.437       0.455    522    98.5   530     ERRALL 
     BURIED  . . . . . . . .    6.762      0.651       0.669    424    97.2   436     ERRALL 
     CORE  . . . . . . . . .    6.887      0.666       0.691    636    98.1   648     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        35        69        78        87       119     121     123   DISTCA 
CA  (P)     28.46     56.10     63.41     70.73     96.75             123   DISTCA 
CA  (RMS)    0.70      1.08      1.30      1.81      3.94                   DISTCA 
 
ALL (N)       232       489       561       654       887     946     966   DISTALL 
ALL (P)     24.02     50.62     58.07     67.70     91.82             966   DISTALL 
ALL (RMS)    0.72      1.15      1.39      1.97      4.10                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)          83            82            39          RMSLSI 
CA  (P)       67.48         66.67         31.71          RMSLSI 
CA  (RMS)      1.17          2.70          6.35          RMSLSI 
 
 
 
END of the results output 
