 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0055.inter 
CONANA-PAIR            ../CONANA/T0055.pair 
# 
NUMBER-OF-PARENTS      4 
ALIGNMENT-DALI(1)      ../PARENTS/casp3.T0055.1esl.rot 
ALIGNMENT-DALI(2)      ../PARENTS/casp3.T0055.1lit.rot 
ALIGNMENT-DALI(3)      ../PARENTS/casp3.T0055.1rtm_1.rot 
ALIGNMENT-DALI(4)      ../PARENTS/casp3.T0055.1htn.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 966 atoms, MODEL 577 atoms, 565 common with TARGET 
           Number of atoms possible to evaluate: 549 
 
 
 CA-RMS TARGET<->PARENT(1esl)	 2.181936 
 
 CA-RMS TARGET<->PARENT(1lit)	 3.321523 
 
 CA-RMS TARGET<->PARENT(1rtm-1)	 2.161827 
 
 CA-RMS TARGET<->PARENT(1htn)	 1.879763 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    46.85           67.6   188    77.0   244     ARMSMC  
     WELL ORDERED  . . . . .    47.61           66.3   181    77.0   235     ARMSMC  
     NO INTER CONTACTS . . .    42.67           69.2   130    79.3   164     ARMSMC  
     SHIFTED CHAIN . . . . .    56.05           54.7   106    70.7   150     ARMSMC  
     ALTERNATIVE PARENT  . .    63.58           48.1    27    58.7    46     ARMSMC  
     SECONDARY STRUCTURE . .    34.25           80.4   102    89.5   114     ARMSMC  
     LARGE SHIFTS/INSERTIONS    70.31           44.6    56    71.8    78     ARMSMC  
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSMC  
     SURFACE . . . . . . . .    53.37           61.0   105    76.1   138     ARMSMC  
     BURIED  . . . . . . . .    37.00           75.9    83    78.3   106     ARMSMC  
     CORE  . . . . . . . . .    32.08           77.3   132    79.5   166     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    52.74           68.0    25    23.8   105     ARMSSC1 
     WELL ORDERED  . . . . .    51.11           69.6    23    23.0   100     ARMSSC1 
     NO INTER CONTACTS . . .    46.90           75.0    16    23.9    67     ARMSSC1 
     RELIABLE SIDE CHAINS  .    53.80           66.7    24    24.7    97     ARMSSC1 
     CHANGED ANGLES  . . . .    60.67           42.9     7    11.9    59     ARMSSC1 
     SHIFTED CHAIN . . . . .    66.15           37.5     8    11.9    67     ARMSSC1 
     ALTERNATIVE PARENT  . .     6.45          100.0     1     5.0    20     ARMSSC1 
     SECONDARY STRUCTURE . .    56.76           71.4    14    28.0    50     ARMSSC1 
     LARGE SHIFTS/INSERTIONS    53.20           33.3     3     8.6    35     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .    70.23           33.3     9    15.8    57     ARMSSC1 
     BURIED  . . . . . . . .    39.64           87.5    16    33.3    48     ARMSSC1 
     CORE  . . . . . . . . .    52.67           72.7    22    31.4    70     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    84.30           40.0    20    26.0    77     ARMSSC2 
     WELL ORDERED  . . . . .    79.04           44.4    18    24.7    73     ARMSSC2 
     NO INTER CONTACTS . . .    90.56           36.4    11    24.4    45     ARMSSC2 
     RELIABLE SIDE CHAINS  .    82.27           38.9    18    31.0    58     ARMSSC2 
     CHANGED ANGLES  . . . .    78.86           36.4    11    20.8    53     ARMSSC2 
     SHIFTED CHAIN . . . . .    88.33           14.3     7    13.7    51     ARMSSC2 
     ALTERNATIVE PARENT  . .    94.97            0.0     1     5.9    17     ARMSSC2 
     SECONDARY STRUCTURE . .    74.78           40.0    10    28.6    35     ARMSSC2 
     LARGE SHIFTS/INSERTIONS    64.63           33.3     3    12.0    25     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .   100.91           12.5     8    18.6    43     ARMSSC2 
     BURIED  . . . . . . . .    71.10           58.3    12    35.3    34     ARMSSC2 
     CORE  . . . . . . . . .    87.31           41.2    17    32.7    52     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    98.58           42.9     7    30.4    23     ARMSSC3 
     WELL ORDERED  . . . . .    97.66           40.0     5    25.0    20     ARMSSC3 
     NO INTER CONTACTS . . .   113.59           33.3     3    27.3    11     ARMSSC3 
     RELIABLE SIDE CHAINS  .    67.93           60.0     5    27.8    18     ARMSSC3 
     CHANGED ANGLES  . . . .   110.78           25.0     4    21.1    19     ARMSSC3 
     SHIFTED CHAIN . . . . .    97.98           33.3     3    20.0    15     ARMSSC3 
     ALTERNATIVE PARENT  . .     1.28          100.0     1    20.0     5     ARMSSC3 
     SECONDARY STRUCTURE . .   119.43            0.0     3    21.4    14     ARMSSC3 
     LARGE SHIFTS/INSERTIONS   111.05           50.0     2    25.0     8     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .    99.13           40.0     5    35.7    14     ARMSSC3 
     BURIED  . . . . . . . .    97.18           50.0     2    22.2     9     ARMSSC3 
     CORE  . . . . . . . . .    93.12           40.0     5    33.3    15     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    70.30           50.0     2    25.0     8     ARMSSC4 
     WELL ORDERED  . . . . .     3.50          100.0     1    14.3     7     ARMSSC4 
     NO INTER CONTACTS . . .    99.36            0.0     1    25.0     4     ARMSSC4 
     RELIABLE SIDE CHAINS  .    70.30           50.0     2    25.0     8     ARMSSC4 
     CHANGED ANGLES  . . . .    70.30           50.0     2    28.6     7     ARMSSC4 
     SHIFTED CHAIN . . . . .     3.50          100.0     1    25.0     4     ARMSSC4 
     ALTERNATIVE PARENT  . .     3.50          100.0     1    50.0     2     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0     5     ARMSSC4 
     LARGE SHIFTS/INSERTIONS     3.50          100.0     1    33.3     3     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .    70.30           50.0     2    33.3     6     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     2     ARMSSC4 
     CORE  . . . . . . . . .    99.36            0.0     1    20.0     5     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =  -0.61304     r(1,2) =   0.70507     r(1,3) =  -0.35645 
 r(2,1) =  -0.77867     r(2,2) =  -0.61554     r(2,3) =   0.12162 
 r(3,1) =  -0.13366     r(3,2) =   0.35211     r(3,3) =   0.92636 
THE OFFSET VECTOR: 
 v(1) =   7.65148     v(2) =  61.12623     v(3) = -32.80860 
 
 Number of iteration 42                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.23           (Number of atoms:   78) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    3.88        121    98.4   123     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0320                            CRMSCA  
     WELL ORDERED  . . . . .    3.93        118    99.2   119     CRMSCA  
     NO INTER CONTACTS . . .    3.16         82   100.0    82     CRMSCA  
     SHIFTED CHAIN . . . . .    4.65         74    97.4    76     CRMSCA  
     ALTERNATIVE PARENT  . .    4.61         23    95.8    24     CRMSCA  
     SECONDARY STRUCTURE . .    3.39         57   100.0    57     CRMSCA  
     SHIFTED SS UNITS  . . .    2.50         10   100.0    10     CRMSCA  
     LARGE SHIFTS/INSERTIONS    4.95         39    97.5    40     CRMSCA  
     SURFACE . . . . . . . .    4.61         68    97.1    70     CRMSCA  
     BURIED  . . . . . . . .    2.66         53   100.0    53     CRMSCA  
     CORE  . . . . . . . . .    3.25         82    98.8    83     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    3.50        450    74.3   606     CRMSMC  
     WELL ORDERED  . . . . .    3.55        436    74.7   584     CRMSMC  
     NO INTER CONTACTS . . .    2.85        306    76.1   402     CRMSMC  
     SHIFTED CHAIN . . . . .    4.45        259    69.1   375     CRMSMC  
     ALTERNATIVE PARENT  . .    4.11         72    61.5   117     CRMSMC  
     SECONDARY STRUCTURE . .    2.75        231    81.6   283     CRMSMC  
     SHIFTED SS UNITS  . . .    2.44         40    80.0    50     CRMSMC  
     LARGE SHIFTS/INSERTIONS    4.83        135    68.5   197     CRMSMC  
     SURFACE . . . . . . . .    4.21        248    72.5   342     CRMSMC  
     BURIED  . . . . . . . .    2.34        202    76.5   264     CRMSMC  
     CORE  . . . . . . . . .    2.73        315    77.0   409     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    5.01        125    26.4   474     CRMSSC  
     WELL ORDERED  . . . . .    5.15        113    25.1   451     CRMSSC  
     NO INTER CONTACTS . . .    3.13         78    26.6   293     CRMSSC  
     RELIABLE SIDE CHAINS  .    4.60        115    28.2   408     CRMSSC  
     CHANGED ANGLES  . . . .    7.21         44    18.2   242     CRMSSC  
     SECONDARY STRUCTURE . .    4.07         74    31.5   235     CRMSSC  
     LARGE SHIFTS/INSERTIONS   10.42         13     8.2   158     CRMSSC  
     SURFACE . . . . . . . .    6.83         39    15.6   250     CRMSSC  
     BURIED  . . . . . . . .    3.92         86    38.4   224     CRMSSC  
     CORE  . . . . . . . . .    3.92        112    35.4   316     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    3.89        549    56.8   966     CRMSALL 
     WELL ORDERED  . . . . .    3.94        525    56.7   926     CRMSALL 
     NO INTER CONTACTS . . .    2.95        367    59.1   621     CRMSALL 
     SHIFTED CHAIN . . . . .    5.05        287    47.6   603     CRMSALL 
     ALTERNATIVE PARENT  . .    4.16         76    39.8   191     CRMSALL 
     SECONDARY STRUCTURE . .    3.15        290    62.6   463     CRMSALL 
     LARGE SHIFTS/INSERTIONS    5.48        145    45.6   318     CRMSALL 
     SURFACE . . . . . . . .    4.63        278    52.5   530     CRMSALL 
     BURIED  . . . . . . . .    2.94        271    62.2   436     CRMSALL 
     CORE  . . . . . . . . .    3.12        404    62.3   648     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     2.77      9   100.0     9      31-SAMRDSTMV-39   
 CA  LOOP  2     3.15      7   100.0     7      45-FTEVKGH-51   
 CA  LOOP  3     6.06      6   100.0     6      60-LQDGAY-65   
 CA  LOOP  4     6.99      5   100.0     5      76-PTDSD-80   
 CA  LOOP  5     6.20      4   100.0     4      90-PQSW-93   
 CA  LOOP  6     3.86      5   100.0     5     100-WSKYN-104  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     2.50     30    66.7    45      31-SAMRDSTMV-39   
 MC  LOOP  2     2.93     28    82.4    34      45-FTEVKGH-51   
 MC  LOOP  3     4.93     12    41.4    29      60-LQDGAY-65   
 MC  LOOP  4     6.96     21    84.0    25      76-PTDSD-80   
 MC  LOOP  5     6.80     17    85.0    20      90-PQSW-93   
 MC  LOOP  6     3.30     15    60.0    25     100-WSKYN-104  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     2.50     30    45.5    66      31-SAMRDSTMV-39   
 ALL LOOP  2     2.93     28    49.1    57      45-FTEVKGH-51   
 ALL LOOP  3     4.93     12    26.1    46      60-LQDGAY-65   
 ALL LOOP  4     7.02     23    63.9    36      76-PTDSD-80   
 ALL LOOP  5     9.21     21    58.3    36      90-PQSW-93   
 ALL LOOP  6     3.72     19    38.8    49     100-WSKYN-104  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     1.98      9   100.0     9      31-SAMRDSTMV-39   
 CA  LOOP  2     2.18      7   100.0     7      45-FTEVKGH-51   
 CA  LOOP  3     2.88      6   100.0     6      60-LQDGAY-65   
 CA  LOOP  4     2.38      5   100.0     5      76-PTDSD-80   
 CA  LOOP  5     0.97      4   100.0     4      90-PQSW-93   
 CA  LOOP  6     1.51      5   100.0     5     100-WSKYN-104  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     1.62     30    66.7    45      31-SAMRDSTMV-39   
 MC  LOOP  2     2.08     28    82.4    34      45-FTEVKGH-51   
 MC  LOOP  3     2.47     12    41.4    29      60-LQDGAY-65   
 MC  LOOP  4     2.49     21    84.0    25      76-PTDSD-80   
 MC  LOOP  5     2.08     17    85.0    20      90-PQSW-93   
 MC  LOOP  6     1.78     15    60.0    25     100-WSKYN-104  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     1.62     30    45.5    66      31-SAMRDSTMV-39   
 ALL LOOP  2     2.08     28    49.1    57      45-FTEVKGH-51   
 ALL LOOP  3     2.47     12    26.1    46      60-LQDGAY-65   
 ALL LOOP  4     3.17     23    63.9    36      76-PTDSD-80   
 ALL LOOP  5     2.52     21    58.3    36      90-PQSW-93   
 ALL LOOP  6     2.45     19    38.8    49     100-WSKYN-104  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    1.872      0.363       0.346    121    98.4   123     ERRCA  
     WELL ORDERED  . . . . .    1.882      0.358       0.338    118    99.2   119     ERRCA  
     NO INTER CONTACTS . . .    1.696      0.387       0.396     82   100.0    82     ERRCA  
     SHIFTED CHAIN . . . . .    2.069      0.303       0.233     74    97.4    76     ERRCA  
     ALTERNATIVE PARENT  . .    1.762      0.239       0.166     23    95.8    24     ERRCA  
     SECONDARY STRUCTURE . .    1.566      0.350       0.360     57   100.0    57     ERRCA  
     LARGE SHIFTS/INSERTIONS    2.044      0.257       0.163     39    97.5    40     ERRCA  
     SURFACE . . . . . . . .    2.181      0.345       0.282     68    97.1    70     ERRCA  
     BURIED  . . . . . . . .    1.476      0.387       0.427     53   100.0    53     ERRCA  
     CORE  . . . . . . . . .    1.790      0.414       0.432     82    98.8    83     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    1.741      0.366       0.353    450    74.3   606     ERRMC  
     WELL ORDERED  . . . . .    1.752      0.361       0.345    436    74.7   584     ERRMC  
     NO INTER CONTACTS . . .    1.579      0.387       0.399    306    76.1   402     ERRMC  
     SHIFTED CHAIN . . . . .    2.074      0.315       0.245    259    69.1   375     ERRMC  
     ALTERNATIVE PARENT  . .    1.572      0.231       0.169     72    61.5   117     ERRMC  
     SECONDARY STRUCTURE . .    1.357      0.347       0.369    231    81.6   283     ERRMC  
     LARGE SHIFTS/INSERTIONS    2.081      0.265       0.168    135    68.5   197     ERRMC  
     SURFACE . . . . . . . .    2.029      0.345       0.291    248    72.5   342     ERRMC  
     BURIED  . . . . . . . .    1.388      0.391       0.428    202    76.5   264     ERRMC  
     CORE  . . . . . . . . .    1.596      0.409       0.432    315    77.0   409     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    2.577      0.415       0.304    125    26.4   474     ERRSC  
     WELL ORDERED  . . . . .    2.654      0.418       0.307    113    25.1   451     ERRSC  
     NO INTER CONTACTS . . .    1.595      0.369       0.298     78    26.6   293     ERRSC  
     RELIABLE SIDE CHAINS  .    2.361      0.400       0.293    115    28.2   408     ERRSC  
     CHANGED ANGLES  . . . .    4.306      0.487       0.290     44    18.2   242     ERRSC  
     SHIFTED CHAIN . . . . .    5.641      0.562       0.307     36    12.0   299     ERRSC  
     ALTERNATIVE PARENT  . .    3.243      0.473       0.237      5     5.3    95     ERRSC  
     SECONDARY STRUCTURE . .    1.907      0.343       0.264     74    31.5   235     ERRSC  
     LARGE SHIFTS/INSERTIONS    7.579      0.631       0.316     13     8.2   158     ERRSC  
     SURFACE . . . . . . . .    3.964      0.474       0.275     39    15.6   250     ERRSC  
     BURIED  . . . . . . . .    1.948      0.388       0.317     86    38.4   224     ERRSC  
     CORE  . . . . . . . . .    1.996      0.390       0.303    112    35.4   316     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    1.928      0.375       0.340    549    56.8   966     ERRALL 
     WELL ORDERED  . . . . .    1.941      0.371       0.335    525    56.7   926     ERRALL 
     NO INTER CONTACTS . . .    1.606      0.383       0.376    367    59.1   621     ERRALL 
     SHIFTED CHAIN . . . . .    2.468      0.341       0.251    287    47.6   603     ERRALL 
     ALTERNATIVE PARENT  . .    1.656      0.244       0.173     76    39.8   191     ERRALL 
     SECONDARY STRUCTURE . .    1.499      0.344       0.341    290    62.6   463     ERRALL 
     LARGE SHIFTS/INSERTIONS    2.491      0.291       0.178    145    45.6   318     ERRALL 
     SURFACE . . . . . . . .    2.270      0.359       0.287    278    52.5   530     ERRALL 
     BURIED  . . . . . . . .    1.577      0.391       0.394    271    62.2   436     ERRALL 
     CORE  . . . . . . . . .    1.726      0.405       0.398    404    62.3   648     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        45        67        79        97       118     121     123   DISTCA 
CA  (P)     36.59     54.47     64.23     78.86     95.93             123   DISTCA 
CA  (RMS)    0.68      0.98      1.26      2.00      3.56                   DISTCA 
 
ALL (N)       210       324       393       455       534     549     966   DISTALL 
ALL (P)     21.74     33.54     40.68     47.10     55.28             966   DISTALL 
ALL (RMS)    0.68      1.04      1.39      1.93      3.36                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)          83            82            39          RMSLSI 
CA  (P)       67.48         66.67         31.71          RMSLSI 
CA  (RMS)      1.17          3.25          4.95          RMSLSI 
 
 
 
END of the results output 
