 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0055.inter 
CONANA-PAIR            ../CONANA/T0055.pair 
# 
NUMBER-OF-PARENTS      4 
ALIGNMENT-DALI(1)      ../PARENTS/casp3.T0055.1esl.rot 
ALIGNMENT-DALI(2)      ../PARENTS/casp3.T0055.1lit.rot 
ALIGNMENT-DALI(3)      ../PARENTS/casp3.T0055.1rtm_1.rot 
ALIGNMENT-DALI(4)      ../PARENTS/casp3.T0055.1htn.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 966 atoms, MODEL 553 atoms, 545 common with TARGET 
           Number of atoms possible to evaluate: 436 
 
 
 CA-RMS TARGET<->PARENT(1esl)	 2.181936 
 
 CA-RMS TARGET<->PARENT(1lit)	 3.321523 
 
 CA-RMS TARGET<->PARENT(1rtm-1)	 2.161827 
 
 CA-RMS TARGET<->PARENT(1htn)	 1.879763 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    93.49           39.0   210    86.1   244     ARMSMC  
     WELL ORDERED  . . . . .    92.70           38.8   201    85.5   235     ARMSMC  
     NO INTER CONTACTS . . .    94.01           38.3   149    90.9   164     ARMSMC  
     SHIFTED CHAIN . . . . .    86.50           47.1   121    80.7   150     ARMSMC  
     ALTERNATIVE PARENT  . .    86.05           48.7    39    84.8    46     ARMSMC  
     SECONDARY STRUCTURE . .    99.26           35.9   103    90.4   114     ARMSMC  
     LARGE SHIFTS/INSERTIONS    76.26           54.0    63    80.8    78     ARMSMC  
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSMC  
     SURFACE . . . . . . . .    91.67           41.1   112    81.2   138     ARMSMC  
     BURIED  . . . . . . . .    95.52           36.7    98    92.5   106     ARMSMC  
     CORE  . . . . . . . . .    99.97           32.7   147    88.6   166     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   105     ARMSSC1 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   100     ARMSSC1 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    67     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    97     ARMSSC1 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    59     ARMSSC1 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    67     ARMSSC1 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0    20     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    50     ARMSSC1 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    35     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    57     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    48     ARMSSC1 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    70     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    77     ARMSSC2 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    73     ARMSSC2 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    45     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    58     ARMSSC2 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    53     ARMSSC2 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    51     ARMSSC2 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0    17     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    35     ARMSSC2 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    25     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    43     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    34     ARMSSC2 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    52     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    23     ARMSSC3 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    20     ARMSSC3 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    11     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    18     ARMSSC3 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    19     ARMSSC3 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    15     ARMSSC3 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     5     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    14     ARMSSC3 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0     8     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    14     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     9     ARMSSC3 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    15     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0     8     ARMSSC4 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0     7     ARMSSC4 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0     4     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0     8     ARMSSC4 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0     7     ARMSSC4 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0     4     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     2     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0     5     ARMSSC4 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0     3     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0     6     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     2     ARMSSC4 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0     5     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =   0.35117     r(1,2) =  -0.44376     r(1,3) =  -0.82447 
 r(2,1) =   0.91835     r(2,2) =   0.33489     r(2,3) =   0.21090 
 r(3,1) =   0.18252     r(3,2) =  -0.83122     r(3,3) =   0.52513 
THE OFFSET VECTOR: 
 v(1) = 122.97467     v(2) = -28.05646     v(3) =  56.51828 
 
 Number of iteration 24                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.72           (Number of atoms:    6) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   17.22        109    88.6   123     CRMSCA  
     CRN = ALL/NP  . . . . .    0.1579                            CRMSCA  
     WELL ORDERED  . . . . .   17.19        105    88.2   119     CRMSCA  
     NO INTER CONTACTS . . .   16.98         76    92.7    82     CRMSCA  
     SHIFTED CHAIN . . . . .   18.54         64    84.2    76     CRMSCA  
     ALTERNATIVE PARENT  . .   18.70         21    87.5    24     CRMSCA  
     SECONDARY STRUCTURE . .   15.17         53    93.0    57     CRMSCA  
     SHIFTED SS UNITS  . . .    9.19          9    90.0    10     CRMSCA  
     LARGE SHIFTS/INSERTIONS   19.52         34    85.0    40     CRMSCA  
     SURFACE . . . . . . . .   18.17         59    84.3    70     CRMSCA  
     BURIED  . . . . . . . .   16.02         50    94.3    53     CRMSCA  
     CORE  . . . . . . . . .   16.06         75    90.4    83     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   17.16        436    71.9   606     CRMSMC  
     WELL ORDERED  . . . . .   17.09        419    71.7   584     CRMSMC  
     NO INTER CONTACTS . . .   16.97        304    75.6   402     CRMSMC  
     SHIFTED CHAIN . . . . .   18.47        256    68.3   375     CRMSMC  
     ALTERNATIVE PARENT  . .   18.49         84    71.8   117     CRMSMC  
     SECONDARY STRUCTURE . .   15.20        212    74.9   283     CRMSMC  
     SHIFTED SS UNITS  . . .    8.96         36    72.0    50     CRMSMC  
     LARGE SHIFTS/INSERTIONS   19.44        136    69.0   197     CRMSMC  
     SURFACE . . . . . . . .   18.06        236    69.0   342     CRMSMC  
     BURIED  . . . . . . . .   16.04        200    75.8   264     CRMSMC  
     CORE  . . . . . . . . .   16.02        300    73.3   409     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    0.00          0     0.0   474     CRMSSC  
     WELL ORDERED  . . . . .    0.00          0     0.0   451     CRMSSC  
     NO INTER CONTACTS . . .    0.00          0     0.0   293     CRMSSC  
     RELIABLE SIDE CHAINS  .    0.00          0     0.0   408     CRMSSC  
     CHANGED ANGLES  . . . .    0.00          0     0.0   242     CRMSSC  
     SECONDARY STRUCTURE . .    0.00          0     0.0   235     CRMSSC  
     LARGE SHIFTS/INSERTIONS    0.00          0     0.0   158     CRMSSC  
     SURFACE . . . . . . . .    0.00          0     0.0   250     CRMSSC  
     BURIED  . . . . . . . .    0.00          0     0.0   224     CRMSSC  
     CORE  . . . . . . . . .    0.00          0     0.0   316     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   17.16        436    45.1   966     CRMSALL 
     WELL ORDERED  . . . . .   17.09        419    45.2   926     CRMSALL 
     NO INTER CONTACTS . . .   16.97        304    49.0   621     CRMSALL 
     SHIFTED CHAIN . . . . .   18.47        256    42.5   603     CRMSALL 
     ALTERNATIVE PARENT  . .   18.49         84    44.0   191     CRMSALL 
     SECONDARY STRUCTURE . .   15.20        212    45.8   463     CRMSALL 
     LARGE SHIFTS/INSERTIONS   19.44        136    42.8   318     CRMSALL 
     SURFACE . . . . . . . .   18.06        236    44.5   530     CRMSALL 
     BURIED  . . . . . . . .   16.04        200    45.9   436     CRMSALL 
     CORE  . . . . . . . . .   16.02        300    46.3   648     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1    16.76      6    66.7     9      31-SAMRDSTMV-39   
 CA  LOOP  2    19.10      7   100.0     7      45-FTEVKGH-51   
 CA  LOOP  3    21.44      6   100.0     6      60-LQDGAY-65   
 CA  LOOP  4    17.00      5   100.0     5      76-PTDSD-80   
 CA  LOOP  5    33.54      2    50.0     4      90-PQSW-93   
 CA  LOOP  6    11.92      5   100.0     5     100-WSKYN-104  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1    16.59     24    53.3    45      31-SAMRDSTMV-39   
 MC  LOOP  2    19.84     28    82.4    34      45-FTEVKGH-51   
 MC  LOOP  3    20.94     24    82.8    29      60-LQDGAY-65   
 MC  LOOP  4    17.62     20    80.0    25      76-PTDSD-80   
 MC  LOOP  5    32.77      8    40.0    20      90-PQSW-93   
 MC  LOOP  6    11.21     20    80.0    25     100-WSKYN-104  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1    16.59     24    36.4    66      31-SAMRDSTMV-39   
 ALL LOOP  2    19.84     28    49.1    57      45-FTEVKGH-51   
 ALL LOOP  3    20.94     24    52.2    46      60-LQDGAY-65   
 ALL LOOP  4    17.62     20    55.6    36      76-PTDSD-80   
 ALL LOOP  5    32.77      8    22.2    36      90-PQSW-93   
 ALL LOOP  6    11.21     20    40.8    49     100-WSKYN-104  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     2.40      6    66.7     9      31-SAMRDSTMV-39   
 CA  LOOP  2     2.09      7   100.0     7      45-FTEVKGH-51   
 CA  LOOP  3     3.04      6   100.0     6      60-LQDGAY-65   
 CA  LOOP  4     0.95      5   100.0     5      76-PTDSD-80   
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 CA  LOOP  6     0.83      5   100.0     5     100-WSKYN-104  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     2.53     24    53.3    45      31-SAMRDSTMV-39   
 MC  LOOP  2     2.34     28    82.4    34      45-FTEVKGH-51   
 MC  LOOP  3     3.01     24    82.8    29      60-LQDGAY-65   
 MC  LOOP  4     1.76     20    80.0    25      76-PTDSD-80   
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 MC  LOOP  6     1.65     20    80.0    25     100-WSKYN-104  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     2.53     24    36.4    66      31-SAMRDSTMV-39   
 ALL LOOP  2     2.34     28    49.1    57      45-FTEVKGH-51   
 ALL LOOP  3     3.01     24    52.2    46      60-LQDGAY-65   
 ALL LOOP  4     1.76     20    55.6    36      76-PTDSD-80   
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 ALL LOOP  6     1.65     20    40.8    49     100-WSKYN-104  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   15.340      1.000       0.500    109    88.6   123     ERRCA  
     WELL ORDERED  . . . . .   15.522      1.000       0.500    105    88.2   119     ERRCA  
     NO INTER CONTACTS . . .   15.303      1.000       0.500     76    92.7    82     ERRCA  
     SHIFTED CHAIN . . . . .   16.793      1.000       0.500     64    84.2    76     ERRCA  
     ALTERNATIVE PARENT  . .   17.437      1.000       0.500     21    87.5    24     ERRCA  
     SECONDARY STRUCTURE . .   13.394      1.000       0.500     53    93.0    57     ERRCA  
     LARGE SHIFTS/INSERTIONS   18.265      1.000       0.500     34    85.0    40     ERRCA  
     SURFACE . . . . . . . .   16.133      1.000       0.500     59    84.3    70     ERRCA  
     BURIED  . . . . . . . .   14.404      1.000       0.500     50    94.3    53     ERRCA  
     CORE  . . . . . . . . .   14.013      1.000       0.500     75    90.4    83     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   15.270      1.000       0.500    436    71.9   606     ERRMC  
     WELL ORDERED  . . . . .   15.396      1.000       0.500    419    71.7   584     ERRMC  
     NO INTER CONTACTS . . .   15.333      1.000       0.500    304    75.6   402     ERRMC  
     SHIFTED CHAIN . . . . .   16.686      1.000       0.500    256    68.3   375     ERRMC  
     ALTERNATIVE PARENT  . .   17.103      1.000       0.500     84    71.8   117     ERRMC  
     SECONDARY STRUCTURE . .   13.375      1.000       0.500    212    74.9   283     ERRMC  
     LARGE SHIFTS/INSERTIONS   18.131      1.000       0.500    136    69.0   197     ERRMC  
     SURFACE . . . . . . . .   15.987      1.000       0.500    236    69.0   342     ERRMC  
     BURIED  . . . . . . . .   14.423      1.000       0.500    200    75.8   264     ERRMC  
     CORE  . . . . . . . . .   13.973      1.000       0.500    300    73.3   409     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.000      0.000       0.000      0     0.0   474     ERRSC  
     WELL ORDERED  . . . . .    0.000      0.000       0.000      0     0.0   451     ERRSC  
     NO INTER CONTACTS . . .    0.000      0.000       0.000      0     0.0   293     ERRSC  
     RELIABLE SIDE CHAINS  .    0.000      0.000       0.000      0     0.0   408     ERRSC  
     CHANGED ANGLES  . . . .    0.000      0.000       0.000      0     0.0   242     ERRSC  
     SHIFTED CHAIN . . . . .    0.000      0.000       0.000      0     0.0   299     ERRSC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0    95     ERRSC  
     SECONDARY STRUCTURE . .    0.000      0.000       0.000      0     0.0   235     ERRSC  
     LARGE SHIFTS/INSERTIONS    0.000      0.000       0.000      0     0.0   158     ERRSC  
     SURFACE . . . . . . . .    0.000      0.000       0.000      0     0.0   250     ERRSC  
     BURIED  . . . . . . . .    0.000      0.000       0.000      0     0.0   224     ERRSC  
     CORE  . . . . . . . . .    0.000      0.000       0.000      0     0.0   316     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   15.270      1.000       0.500    436    45.1   966     ERRALL 
     WELL ORDERED  . . . . .   15.396      1.000       0.500    419    45.2   926     ERRALL 
     NO INTER CONTACTS . . .   15.333      1.000       0.500    304    49.0   621     ERRALL 
     SHIFTED CHAIN . . . . .   16.686      1.000       0.500    256    42.5   603     ERRALL 
     ALTERNATIVE PARENT  . .   17.103      1.000       0.500     84    44.0   191     ERRALL 
     SECONDARY STRUCTURE . .   13.375      1.000       0.500    212    45.8   463     ERRALL 
     LARGE SHIFTS/INSERTIONS   18.131      1.000       0.500    136    42.8   318     ERRALL 
     SURFACE . . . . . . . .   15.987      1.000       0.500    236    44.5   530     ERRALL 
     BURIED  . . . . . . . .   14.423      1.000       0.500    200    45.9   436     ERRALL 
     CORE  . . . . . . . . .   13.973      1.000       0.500    300    46.3   648     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         5         6        11        28     109     123   DISTCA 
CA  (P)      0.00      4.07      4.88      8.94     22.76             123   DISTCA 
CA  (RMS)    0.00      1.53      1.72      2.95      6.37                   DISTCA 
 
ALL (N)         1        11        24        46       115     436     966   DISTALL 
ALL (P)      0.10      1.14      2.48      4.76     11.90             966   DISTALL 
ALL (RMS)    0.95      1.58      2.05      3.09      6.36                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)          83            75            34          RMSLSI 
CA  (P)       67.48         60.98         27.64          RMSLSI 
CA  (RMS)      1.17         16.06         19.52          RMSLSI 
 
 
 
END of the results output 
