 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
# WARNING! The number of residues in SS section: 67 , MODEL 67 , TARGET 104 
#          The number of residues possible to evaluate: 67 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP     2     A     C     C             1.00 
 SSP     3     P     C     E             1.00 
 SSP     4     V     H     E             1.00 
 SSP     5     K     H     E             1.00 
 SSP     6     S     H     C             1.00 
 SSP     7     Q     H     C             1.00 
 SSP     8     E     C     H             1.00 
 SSP     9     S     C     H             1.00 
 SSP    10     I     H     H             1.00 
 SSP    11     N     H     H             1.00 
 SSP    12     Q     H     H             1.00 
 SSP    13     K     H     H             1.00 
 SSP    14     L     H     H             1.00 
 SSP    15     A     H     H             1.00 
 SSP    16     L     H     H             1.00 
 SSP    17     V     H     H             1.00 
 SSP    18     I     H     H             1.00 
 SSP    19     K     H     H             1.00 
 SSP    20     S     C     H             1.00 
 SSP    21     G     C     C             1.00 
 SSP    22     K     C     C             1.00 
 SSP    23     Y     E     C             1.00 
 SSP    24     T     E     C             1.00 
 SSP    25     L     E     C             1.00 
 SSP    26     G     C     C             1.00 
 SSP    27     Y     C     C             1.00 
 SSP    28     K     C     C             1.00 
 SSP    29     S     H     C             1.00 
 SSP    30     T     H     C             1.00 
 SSP    31     V     H     E             1.00 
 SSP    32     K     H     C             1.00 
 SSP    33     S     H     C             1.00 
 SSP    34     L     H     C             1.00 
 SSP    35     R     H     C             1.00 
 SSP    36     Q     H     C             1.00 
 SSP    37     G     H     C             1.00 
 SSP    38     K     C     C             1.00 
 SSP    39     S     C     C             1.00 
 SSP    40     K     C     E             1.00 
 SSP    41     L     E     E             1.00 
 SSP    42     I     E     E             1.00 
 SSP    43     I     E     E             1.00 
 SSP    44     I     E     E             1.00 
 SSP    45     A     E     C             1.00 
 SSP    46     A     C     C             1.00 
 SSP    47     N     C     C             1.00 
 SSP    48     T     C     C             1.00 
 SSP    49     P     C     C             1.00 
 SSP    50     V     H     C             1.00 
 SSP    51     L     H     C             1.00 
 SSP    52     R     H     C             1.00 
 SSP    53     K     H     H             1.00 
 SSP    54     S     H     H             1.00 
 SSP    55     E     H     H             1.00 
 SSP    56     L     H     H             1.00 
 SSP    57     E     H     H             1.00 
 SSP    58     Y     H     H             1.00 
 SSP    59     Y     H     H             1.00 
 SSP    60     A     H     H             1.00 
 SSP    61     M     H     H             1.00 
 SSP    62     L     H     H             1.00 
 SSP    63     S     H     C             1.00 
 SSP    64     K     C     C             1.00 
 SSP    65     T     C     C             1.00 
 SSP    66     K     C     C             1.00 
 SSP    67     V     E     C             1.00 
 SSP    68     Y     E     C             1.00 
 SSP  BREAK 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              58.2      54.1     40.0     75.0     64.4 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        56.7      64.9     50.0     45.1     64.4 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG            7              42.9              14.3 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00      67    100.0     58.2 
 
 BIN  0.00 - 1.00      1.00      67    100.0     58.2 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
 
 CONSIDERED - explicitly provided contacts (with positive confidence) or 
              non contacts (with negative confidence) possible to evaluate 
 SEP      - Minimum separation between residues considered 
 NPC      - Number of contacts predicted correctly 
 PC(P)    - Percent of contacts predicted correctly from CONSIDERED in PREDICTION 
 PC(T)    - Percent of contacts predicted correctly from CONSIDERED in TARGET with SEP limit 
 PC(TT)   - Percent of contacts predicted correctly from TOTAL in TARGET with SEP limit 
 
                        CONSIDERED     CONSIDERED       TOTAL          TOTAL 
                      in PREDICTION    in TARGET    in PREDICTION    in TARGET 
 ALL RESIDUES USED          68              68            68            104 
 ALL CONTACTS (< 8.0A)     285             272           285            548 
 
               in PREDICTION      Predicted correctly          Submitted as        in TARGET 
                CONSIDERED     NPC   PC(P)   PC(T)   PC(TT)    NOT  predicted   CONSIDERED  TOTAL  |   SEP 
 RES CONTACTS       285        158   55.44   58.09   28.83       0     0.00         272       548  |   1-9999 
 RES CONTACTS       172        156   90.70   78.39   53.42       0     0.00         199       292  |   1-4    
 RES CONTACTS        20          1    5.00    6.67    3.57       0     0.00          15        28  |   5-8    
 RES CONTACTS        93          1    1.08    1.72    0.44       0     0.00          58       228  |   9-9999 
 
 
 
# WARNING! TARGET 1647 atoms, MODEL 811 atoms, 803 common with TARGET 
           Number of atoms possible to evaluate: 546 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    74.01           53.7   134    65.0   206     ARMSMC  
     SECONDARY STRUCTURE . .    60.05           65.5    87    88.8    98     ARMSMC  
     SURFACE . . . . . . . .    74.03           48.8    84    66.7   126     ARMSMC  
     BURIED  . . . . . . . .    73.97           62.0    50    62.5    80     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    93.62           28.3    60    69.0    87     ARMSSC1 
     RELIABLE SIDE CHAINS  .    95.19           23.6    55    70.5    78     ARMSSC1 
     SECONDARY STRUCTURE . .    92.00           30.0    40    88.9    45     ARMSSC1 
     SURFACE . . . . . . . .    93.82           20.5    39    68.4    57     ARMSSC1 
     BURIED  . . . . . . . .    93.26           42.9    21    70.0    30     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    75.21           27.9    43    70.5    61     ARMSSC2 
     RELIABLE SIDE CHAINS  .    66.00           27.3    33    75.0    44     ARMSSC2 
     SECONDARY STRUCTURE . .    75.38           30.0    30    93.8    32     ARMSSC2 
     SURFACE . . . . . . . .    75.11           24.1    29    67.4    43     ARMSSC2 
     BURIED  . . . . . . . .    75.42           35.7    14    77.8    18     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    83.39           30.0    20    80.0    25     ARMSSC3 
     RELIABLE SIDE CHAINS  .    87.76           23.5    17    81.0    21     ARMSSC3 
     SECONDARY STRUCTURE . .    78.03           45.5    11   100.0    11     ARMSSC3 
     SURFACE . . . . . . . .    83.15           31.6    19    79.2    24     ARMSSC3 
     BURIED  . . . . . . . .    87.72            0.0     1   100.0     1     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    67.10           53.8    13    86.7    15     ARMSSC4 
     RELIABLE SIDE CHAINS  .    67.10           53.8    13    86.7    15     ARMSSC4 
     SECONDARY STRUCTURE . .    57.95           50.0     6   100.0     6     ARMSSC4 
     SURFACE . . . . . . . .    67.10           53.8    13    86.7    15     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1    2 - 69   68   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    29     41 - 69       4.75    12.44 
  LCS LOCAL_SCORE:             37.52 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1    2 - 69   68   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    18     52 - 69       1.83    13.86 
  LCS LOCAL_SCORE:             17.58 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1    2 - 69   68   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    14      7 - 20       1.00    16.35 
  LCS LOCAL_SCORE:             11.22 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS       2       A     4    4   17       C        2   3   3   3   3   3   3   8   9  12  17  20  22  23  32  34  37  39  42  48  
 LCS       3       P     4    4   24       C        2   3   3   3   3   4   6   8   9  12  17  20  22  26  32  34  37  39  46  49  
 LCS       4       V     4    5   24       H        2   3   3   3   3   4   5   7   9  12  17  20  22  26  32  36  37  39  42  49  
 LCS       5       K     4    5   24       H        2   3   3   3   3   5  10  10  12  22  24  25  30  33  38  42  44  46  47  49  
 LCS       6       S     4   15   24       H        2   2   5   8  11  16  17  19  21  23  27  31  32  34  38  42  44  46  47  49  
 LCS       7       Q    14   16   24       H        2   6  12  13  14  16  17  19  21  23  26  31  32  34  38  42  44  46  47  49  
 LCS       8       E    14   16   24       C        2   4  10  13  14  16  17  19  21  23  27  31  32  34  38  42  44  46  47  49  
 LCS       9       S    14   16   24       C        5  11  12  13  14  16  17  19  21  23  27  31  32  34  38  42  44  46  47  49  
 LCS      10       I    14   16   24       H        5  11  12  13  14  16  17  19  21  23  27  31  32  34  38  42  44  46  47  49  
 LCS      11       N    14   16   24       H        4  11  12  13  14  16  17  19  21  23  27  31  32  34  38  42  44  46  47  49  
 LCS      12       Q    14   16   24       H        5  11  12  13  14  16  17  19  21  23  27  31  32  34  38  42  44  46  47  49  
 LCS      13       K    14   16   24       H        7  11  12  13  14  16  17  19  21  23  27  31  32  34  38  42  44  46  47  49  
 LCS      14       L    14   16   24       H        7  11  12  13  14  16  17  19  21  23  27  31  32  34  38  42  44  46  47  49  
 LCS      15       A    14   16   24       H        7  11  12  13  14  16  17  19  21  23  27  31  32  34  38  42  44  46  47  49  
 LCS      16       L    14   16   24       H        7  11  12  13  14  16  17  19  21  23  27  31  32  34  38  42  44  46  47  49  
 LCS      17       V    14   16   24       H        7  11  12  13  14  16  17  19  21  23  27  31  32  34  38  42  44  46  47  49  
 LCS      18       I    14   16   24       H        7  11  12  13  14  14  16  19  21  23  27  31  32  34  38  42  44  46  47  49  
 LCS      19       K    14   16   24       H        7  11  12  13  14  14  16  19  21  23  25  31  32  34  38  42  44  46  47  49  
 LCS      20       S    14   16   24       C        7  11  12  13  14  14  16  19  21  23  27  31  32  34  38  42  44  46  47  49  
 LCS      21       G     4   16   24       C        2   3   3  13  14  14  16  19  21  23  27  31  32  34  38  42  44  46  47  49  
 LCS      22       K     3   16   24       C        0   2   2   8  12  16  17  19  21  23  27  31  32  34  38  42  44  46  47  49  
 LCS      23       Y     3    5   24       E        2   2   2   3   4   5   7   9  13  22  25  31  32  34  38  42  44  46  47  49  
 LCS      24       T     4    5   24       E        2   2   3   3   5   7  14  17  19  23  27  31  32  34  38  42  44  46  47  49  
 LCS      25       L     4    5   24       E        2   2   3   3   5   6   9  11  13  18  19  22  28  31  38  42  44  46  47  49  
 LCS      26       G     4    5   24       C        2   2   3   3   5   6   6  11  15  18  21  24  25  27  35  39  44  46  47  49  
 LCS      27       Y     4    5   24       C        2   2   3   3   4   9  11  15  17  19  22  25  28  32  38  42  44  46  47  49  
 LCS      28       K     3    5   23       C        2   2   2   2   3  10  12  14  15  16  22  24  25  30  33  37  40  43  47  49  
 LCS      29       S     3    4   17       H        0   2  10  11  11  15  18  19  20  21  22  23  25  30  33  37  38  42  43  48  
 LCS      30       T     3    4   21       H        0   2   2   2   3  13  18  19  20  21  22  24  25  28  33  36  38  40  43  45  
 LCS      31       V     4    4   21       H        2   3   3   3   4   4   7   9  12  17  18  20  22  25  29  30  33  37  39  40  
 LCS      32       K     4    4   21       H        2   3   3   3   3   4   6   8   9  11  13  15  15  16  24  25  32  37  39  40  
 LCS      33       S     4    4   21       H        2   3   3   3   4   4   7   9  13  17  18  20  22  23  24  28  32  37  39  40  
 LCS      34       L     4    4   21       H        2   3   3   3   3   4   8  11  13  17  18  20  22  23  24  29  32  37  39  40  
 LCS      35       R     4    4   21       H        2   3   3   3   4   8   9  11  13  17  18  20  22  23  24  25  27  30  34  38  
 LCS      36       Q     4    4   21       H        2   3   3   3   3   4   7   9  13  17  18  20  22  23  24  26  32  37  39  40  
 LCS      37       G     4    4   21       H        2   2   3   5   7   8   9  11  13  17  18  20  22  23  24  26  32  37  39  40  
 LCS      38       K     4    4   21       C        2   2   3   3   5   7   9  10  13  15  18  20  22  23  24  26  30  37  38  40  
 LCS      39       S     4    9   21       C        2   2   3   3   4   7   7  10  12  14  17  20  22  23  24  26  30  37  39  40  
 LCS      40       K     4   10   27       C        2   3   5   6   8   8  10  11  13  17  18  20  25  27  31  31  33  37  39  40  
 LCS      41       L     7   10   29       E        3   5   6   7   8   8  10  11  13  17  18  23  27  28  31  31  33  37  39  41  
 LCS      42       I     7   10   29       E        3   5   6   7   8   8  10  11  13  17  18  23  27  28  31  35  38  40  43  45  
 LCS      43       I     7   10   29       E        3   5   6   7   8   8  11  17  19  21  25  27  32  34  38  42  44  46  47  49  
 LCS      44       I     7   10   29       E        3   5   6   7   8  13  17  19  21  23  27  31  32  34  38  42  44  46  47  49  
 LCS      45       A     7   10   29       E        3   5   6   7   8  13  15  17  20  23  27  31  32  34  38  42  44  46  47  49  
 LCS      46       A     7   10   29       C        3   5   6   7   8   8  10  12  16  19  22  25  28  33  38  42  44  46  47  49  
 LCS      47       N     7   10   29       C        2   4   6   7   8   8  12  15  17  19  23  25  28  34  38  42  44  46  47  49  
 LCS      48       T     3   10   29       C        2   2   4   4   6   9  12  15  17  19  22  25  28  32  37  42  44  46  47  49  
 LCS      49       P     3   10   29       C        2   2   4   7   8   8  10  12  15  19  21  24  27  28  31  32  34  37  42  48  
 LCS      50       V     3    8   29       H        2   2   2   3   6   8  10  12  15  19  22  25  27  28  35  38  39  46  47  49  
 LCS      51       L     3   13   29       H        2   2   2   8   9  13  17  19  20  23  25  29  32  34  38  42  44  46  47  49  
 LCS      52       R    11   18   29       H        4   7  12  13  14  17  18  19  20  23  27  31  32  34  38  42  44  46  47  49  
 LCS      53       K    11   18   29       H        4   9  12  13  14  17  18  19  20  23  27  31  32  34  38  42  44  46  47  49  
 LCS      54       S    11   18   29       H        8   9  12  13  14  17  18  19  20  23  27  31  32  34  38  42  44  46  47  49  
 LCS      55       E    11   18   29       H        8   9  12  13  14  17  18  19  20  23  27  31  32  34  38  42  44  46  47  49  
 LCS      56       L    11   18   29       H        8   9  12  13  14  17  18  19  21  23  27  31  32  34  38  42  44  46  47  49  
 LCS      57       E    11   18   29       H        8   9  12  13  14  17  18  19  20  23  27  31  32  34  38  42  44  46  47  49  
 LCS      58       Y    11   18   29       H        8   9  12  13  14  17  18  19  20  23  27  31  32  34  38  42  44  46  47  49  
 LCS      59       Y    11   18   29       H        8   9  12  13  14  17  18  19  20  23  27  31  32  34  38  42  44  46  47  49  
 LCS      60       A    11   18   29       H        8   9  11  13  14  17  18  19  21  23  27  31  32  34  38  42  44  46  47  49  
 LCS      61       M    11   18   29       H        8   9  10  13  14  17  18  19  20  23  27  31  32  34  38  42  44  46  47  49  
 LCS      62       L    11   18   29       H        8   9  12  13  14  17  18  19  20  21  22  25  28  33  38  42  44  46  47  49  
 LCS      63       S    11   18   29       H        2   6  12  13  14  17  18  19  20  21  22  25  27  31  34  36  42  46  47  49  
 LCS      64       K     6   18   29       C        2   4   5   7  11  17  17  18  20  21  22  24  27  28  32  36  38  42  46  48  
 LCS      65       T     6   18   29       C        3   6  12  13  14  17  18  19  20  21  24  27  31  34  38  42  44  46  47  49  
 LCS      66       K     6   18   29       C        3   4   5   9  14  17  18  19  21  23  27  31  32  34  38  42  44  46  47  49  
 LCS      67       V     6   18   29       E        3   4   5   7  11  17  18  19  21  23  25  31  32  34  38  42  44  46  47  49  
 LCS      68       Y     6   18   29       E        3   6  12  13  14  17  18  19  20  21  22  25  27  34  38  42  44  46  47  49  
 LCS      69       Y     5   18   29       E        2   6  12  13  14  17  18  19  20  21  22  25  27  28  31  42  44  46  47  49  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   4.80 
 
 NUMBER_OF_CA_Tg:  104      NUMBER_OF_CA_Pr:   68      PERCENT_OF_CA:  65.38  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max       9      12      13      14      15      18      19      20      22      24      29      33      34      36      40      44      46      48      49      51  
 GDT PERCENT_OF_CA_Pr   13.24   17.65   19.12   20.59   22.06   26.47   27.94   29.41   32.35   35.29   42.65   48.53   50.00   52.94   58.82   64.71   67.65   70.59   72.06   75.00 
 GDT PERCENT_OF_CA_Tg    8.65   11.54   12.50   13.46   14.42   17.31   18.27   19.23   21.15   23.08   27.88   31.73   32.69   34.62   38.46   42.31   44.23   46.15   47.12   49.04 
 GDT FRAGMENT: Beg-End  54-62    9-20    7-20    7-20   52-69   52-69   29-69   29-69    6-67    6-67    6-66    6-67    6-67    6-67    6-68    5-68    5-69    5-69    5-69    3-69  
 GDT RMS_LOCAL           0.30    0.66    0.90    1.00    1.31    1.83    2.25    2.41    2.87    3.18    3.98    4.25    4.36    4.57    5.10    5.45    5.61    5.83    5.95    6.19 
 GDT RMS_ALL_CA         15.44   16.97   16.24   16.35   13.63   13.86   13.87   13.85   12.49   12.39   12.27   12.32   12.27   12.19   12.36   12.35   12.36   12.32   12.25   12.37 
 
 
 TEST (CA)  RMS =  11.40               (Number of atoms:   68) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   11.40         68    65.4   104     CRMSCA  
     CRN = ALL/NP  . . . . .    0.1676                            CRMSCA  
     SECONDARY STRUCTURE . .   11.00         44    89.8    49     CRMSCA  
     SURFACE . . . . . . . .   11.81         43    67.2    64     CRMSCA  
     BURIED  . . . . . . . .   10.66         25    62.5    40     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   11.37        336    65.8   511     CRMSMC  
     SECONDARY STRUCTURE . .   10.99        218    89.3   244     CRMSMC  
     SURFACE . . . . . . . .   11.81        213    67.2   317     CRMSMC  
     BURIED  . . . . . . . .   10.55        123    63.4   194     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   12.86        275    22.3  1231     CRMSSC  
     RELIABLE SIDE CHAINS  .   12.89        239    20.4  1171     CRMSSC  
     SECONDARY STRUCTURE . .   12.39        189    29.4   642     CRMSSC  
     SURFACE . . . . . . . .   13.94        184    23.1   798     CRMSSC  
     BURIED  . . . . . . . .   10.34         91    21.0   433     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   12.11        546    33.2  1647     CRMSALL 
     SECONDARY STRUCTURE . .   11.75        364    43.4   838     CRMSALL 
     SURFACE . . . . . . . .   12.88        355    33.7  1054     CRMSALL 
     BURIED  . . . . . . . .   10.54        191    32.2   593     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    8.603      0.740       0.370     68    65.4   104     ERRCA  
     SECONDARY STRUCTURE . .    7.803      0.703       0.351     44    89.8    49     ERRCA  
     SURFACE . . . . . . . .    9.051      0.754       0.377     43    67.2    64     ERRCA  
     BURIED  . . . . . . . .    7.833      0.716       0.358     25    62.5    40     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    8.562      0.736       0.368    336    65.8   511     ERRMC  
     SECONDARY STRUCTURE . .    7.768      0.697       0.348    218    89.3   244     ERRMC  
     SURFACE . . . . . . . .    9.024      0.748       0.374    213    67.2   317     ERRMC  
     BURIED  . . . . . . . .    7.763      0.714       0.357    123    63.4   194     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    9.773      0.768       0.384    275    22.3  1231     ERRSC  
     RELIABLE SIDE CHAINS  .    9.704      0.765       0.382    239    20.4  1171     ERRSC  
     SECONDARY STRUCTURE . .    9.102      0.746       0.373    189    29.4   642     ERRSC  
     SURFACE . . . . . . . .   10.458      0.766       0.383    184    23.1   798     ERRSC  
     BURIED  . . . . . . . .    8.388      0.773       0.386     91    21.0   433     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    9.124      0.749       0.375    546    33.2  1647     ERRALL 
     SECONDARY STRUCTURE . .    8.434      0.718       0.359    364    43.4   838     ERRALL 
     SURFACE . . . . . . . .    9.682      0.755       0.377    355    33.7  1054     ERRALL 
     BURIED  . . . . . . . .    8.088      0.739       0.370    191    32.2   593     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         2         6        13        42      68     104   DISTCA 
CA  (P)      0.00      1.92      5.77     12.50     40.38             104   DISTCA 
CA  (RMS)    0.00      1.43      2.11      3.20      6.25                   DISTCA 
 
ALL (N)         2        22        47        94       339     546    1647   DISTALL 
ALL (P)      0.12      1.34      2.85      5.71     20.58            1647   DISTALL 
ALL (RMS)    0.87      1.55      2.06      3.29      6.65                   DISTALL 
 
 
 
 
END of the results output 
