 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
#          The number of residues in SS section: 69 , MODEL 69 , TARGET 69 
#          The number of residues possible to evaluate: 69 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP    72     P     C     C             1.00 
 SSP    73     G     C     C             1.00 
 SSP    74     D     C     C             1.00 
 SSP    75     P     H     C             1.00 
 SSP    76     E     H     C             1.00 
 SSP    77     E     H     H             1.00 
 SSP    78     F     H     H             1.00 
 SSP    79     V     H     H             1.00 
 SSP    80     K     H     H             1.00 
 SSP    81     G     H     H             1.00 
 SSP    82     F     H     H             1.00 
 SSP    83     Q     C     H             1.00 
 SSP    84     V     C     H             1.00 
 SSP    85     F     C     H             1.00 
 SSP    86     D     C     C             1.00 
 SSP    87     K     C     C             1.00 
 SSP    88     D     C     C             1.00 
 SSP    89     A     C     C             1.00 
 SSP    90     T     C     C             1.00 
 SSP    91     G     C     C             1.00 
 SSP    92     M     C     E             1.00 
 SSP    93     I     C     E             1.00 
 SSP    94     G     C     C             1.00 
 SSP    95     V     H     H             1.00 
 SSP    96     G     H     H             1.00 
 SSP    97     E     H     H             1.00 
 SSP    98     L     H     H             1.00 
 SSP    99     R     H     H             1.00 
 SSP   100     Y     H     H             1.00 
 SSP   101     V     H     H             1.00 
 SSP   102     L     H     H             1.00 
 SSP   103     T     H     H             1.00 
 SSP   104     S     H     H             1.00 
 SSP   105     L     H     C             1.00 
 SSP   106     G     H     C             1.00 
 SSP   107     E     C     C             1.00 
 SSP   108     K     C     C             1.00 
 SSP   109     L     C     C             1.00 
 SSP   110     S     C     C             1.00 
 SSP   111     N     H     H             1.00 
 SSP   112     E     H     H             1.00 
 SSP   113     E     H     H             1.00 
 SSP   114     M     H     H             1.00 
 SSP   115     D     H     H             1.00 
 SSP   116     E     H     H             1.00 
 SSP   117     L     H     H             1.00 
 SSP   118     L     H     H             1.00 
 SSP   119     K     H     H             1.00 
 SSP   120     G     H     H             1.00 
 SSP   121     V     C     C             1.00 
 SSP   122     P     C     C             1.00 
 SSP   123     V     C     C             1.00 
 SSP   124     K     C     C             1.00 
 SSP   125     D     C     C             1.00 
 SSP   126     G     C     C             1.00 
 SSP   127     M     C     C             1.00 
 SSP   128     V     C     E             1.00 
 SSP   129     N     C     E             1.00 
 SSP   130     Y     C     H             1.00 
 SSP   131     H     C     H             1.00 
 SSP   132     D     H     H             1.00 
 SSP   133     F     H     H             1.00 
 SSP   134     V     H     H             1.00 
 SSP   135     Q     H     H             1.00 
 SSP   136     M     H     H             1.00 
 SSP   137     I     H     H             1.00 
 SSP   138     L     C     H             1.00 
 SSP   139     A     C     C             1.00 
 SSP   140     N     C     C             1.00 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              79.7      88.9      0.0     69.7    100.0 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        79.8      98.0    100.0     65.3    100.0 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG            4             100.0               0.0 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00      69    100.0     79.7 
 
 BIN  0.00 - 1.00      1.00      69    100.0     79.7 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
 
 CONSIDERED - explicitly provided contacts (with positive confidence) or 
              non contacts (with negative confidence) possible to evaluate 
 SEP      - Minimum separation between residues considered 
 NPC      - Number of contacts predicted correctly 
 PC(P)    - Percent of contacts predicted correctly from CONSIDERED in PREDICTION 
 PC(T)    - Percent of contacts predicted correctly from CONSIDERED in TARGET with SEP limit 
 PC(TT)   - Percent of contacts predicted correctly from TOTAL in TARGET with SEP limit 
 
                        CONSIDERED     CONSIDERED       TOTAL          TOTAL 
                      in PREDICTION    in TARGET    in PREDICTION    in TARGET 
 ALL RESIDUES USED          69              69            69             69 
 ALL CONTACTS (< 8.0A)     298             275           298            275 
 
               in PREDICTION      Predicted correctly          Submitted as        in TARGET 
                CONSIDERED     NPC   PC(P)   PC(T)   PC(TT)    NOT  predicted   CONSIDERED  TOTAL  |   SEP 
 RES CONTACTS       298        228   76.51   82.91   82.91       0     0.00         275       275  |   1-9999 
 RES CONTACTS       211        193   91.47   92.79   92.79       0     0.00         208       208  |   1-4    
 RES CONTACTS        28         12   42.86   60.00   60.00       0     0.00          20        20  |   5-8    
 RES CONTACTS        59         23   38.98   48.94   48.94       0     0.00          47        47  |   9-9999 
 
 
 
# WARNING! TARGET 1062 atoms, MODEL 1088 atoms, 536 common with TARGET 
           Number of atoms possible to evaluate: 536 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    62.34           59.6   136   100.0   136     ARMSMC  
     SECONDARY STRUCTURE . .    29.05           90.3    72   100.0    72     ARMSMC  
     SURFACE . . . . . . . .    63.04           57.8   116   100.0   116     ARMSMC  
     BURIED  . . . . . . . .    58.09           70.0    20   100.0    20     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    85.49           35.6    59   100.0    59     ARMSSC1 
     RELIABLE SIDE CHAINS  .    88.87           29.4    51   100.0    51     ARMSSC1 
     SECONDARY STRUCTURE . .    86.95           34.4    32   100.0    32     ARMSSC1 
     SURFACE . . . . . . . .    84.84           34.6    52   100.0    52     ARMSSC1 
     BURIED  . . . . . . . .    90.17           42.9     7   100.0     7     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    79.14           37.0    46    97.9    47     ARMSSC2 
     RELIABLE SIDE CHAINS  .    70.97           37.1    35    97.2    36     ARMSSC2 
     SECONDARY STRUCTURE . .    80.18           42.3    26   100.0    26     ARMSSC2 
     SURFACE . . . . . . . .    76.92           35.7    42    97.7    43     ARMSSC2 
     BURIED  . . . . . . . .    99.55           50.0     4   100.0     4     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    84.56           21.1    19   100.0    19     ARMSSC3 
     RELIABLE SIDE CHAINS  .    85.37           23.5    17   100.0    17     ARMSSC3 
     SECONDARY STRUCTURE . .    92.68           25.0    12   100.0    12     ARMSSC3 
     SURFACE . . . . . . . .    84.54           23.5    17   100.0    17     ARMSSC3 
     BURIED  . . . . . . . .    84.73            0.0     2   100.0     2     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .   103.95           33.3     6   100.0     6     ARMSSC4 
     RELIABLE SIDE CHAINS  .   103.95           33.3     6   100.0     6     ARMSSC4 
     SECONDARY STRUCTURE . .   101.99           33.3     3   100.0     3     ARMSSC4 
     SURFACE . . . . . . . .   103.95           33.3     6   100.0     6     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1   72 - 140  69   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    68     73 - 140      4.99     5.03 
  LCS LOCAL_SCORE:             98.17 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1   72 - 140  69   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    19     89 - 107      1.97     5.71 
  LCS LOCAL_SCORE:             22.24 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1   72 - 140  69   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    13     94 - 106      0.70     9.07 
  LONGEST_CONTINUOUS_SEGMENT    13     95 - 107      0.98     8.20 
  LONGEST_CONTINUOUS_SEGMENT    13    109 - 121      0.88    12.59 
  LCS LOCAL_SCORE:             14.28 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS      72       P     3    5   50       C        4   4   4   5   5   7  10  15  34  46  59  72  81  86  91  94  97  98  98 100  
 LCS      73       G     3    5   68       C        4   4   5   7   8  37  44  57  63  68  72  76  81  88  92  94  97  98  98 100  
 LCS      74       D     3    5   68       C        4   4   5   7  10  18  28  42  60  68  72  76  81  88  92  94  97  98  98 100  
 LCS      75       P     3   12   68       H        4   4   4   5  15  28  33  47  60  68  72  76  81  88  92  94  97  98  98 100  
 LCS      76       E     9   15   68       H        5  11  14  17  26  26  27  31  37  44  52  63  68  72  75  85  92  94  97 100  
 LCS      77       E     9   16   68       H       10  11  14  21  26  26  27  31  39  44  56  63  73  82  89  92  95  98  98 100  
 LCS      78       F     9   16   68       H       10  11  14  21  26  26  28  36  43  55  66  76  81  88  92  94  97  98  98 100  
 LCS      79       V     9   16   68       H       10  11  14  21  26  26  28  36  46  57  68  76  81  88  92  94  97  98  98 100  
 LCS      80       K     9   16   68       H       10  11  14  21  26  26  28  36  43  53  66  76  81  88  92  94  97  98  98 100  
 LCS      81       G     9   16   68       H       10  11  14  21  26  26  28  36  49  62  72  76  81  88  92  94  97  98  98 100  
 LCS      82       F     9   16   68       H       10  11  14  21  26  27  36  50  63  68  72  76  81  88  92  94  97  98  98 100  
 LCS      83       Q     9   16   68       C       10  11  14  23  27  31  40  52  63  68  72  78  81  88  92  94  97  98  98 100  
 LCS      84       V     9   16   68       C        4  11  14  21  26  26  30  40  47  62  72  76  81  88  92  94  97  98  98 100  
 LCS      85       F     7   16   68       C        5   8  11  21  26  26  27  31  42  50  56  62  79  88  92  94  97  98  98 100  
 LCS      86       D     7   16   68       C        5  10  14  21  26  30  39  52  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS      87       K     7   16   68       C        5   8  11  21  26  26  27  33  37  53  69  78  81  88  92  94  97  98  98 100  
 LCS      88       D     7   16   68       C        5   8  13  21  26  31  36  53  63  69  75  78  81  86  92  94  97  98  98 100  
 LCS      89       A     7   19   68       C        4  10  18  30  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS      90       T     7   19   68       C        4   5  13  21  28  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS      91       G     8   19   68       C        4   8  14  24  36  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS      92       M     8   19   68       C        5  13  18  30  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS      93       I    10   19   68       C        5  13  18  30  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS      94       G    13   19   68       C        7  14  18  30  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS      95       V    13   19   68       H        8  17  18  26  33  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS      96       G    13   19   68       H       10  17  18  30  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS      97       E    13   19   68       H       13  17  18  30  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS      98       L    13   19   68       H       13  17  18  26  37  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS      99       R    13   19   68       H       13  17  18  30  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     100       Y    13   19   68       H       13  17  18  30  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     101       V    13   19   68       H       13  17  18  27  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     102       L    13   19   68       H       13  17  18  30  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     103       T    13   19   68       H       13  17  18  30  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     104       S    13   19   68       H       13  17  18  26  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     105       L    13   19   68       H       13  17  18  27  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     106       G    13   19   68       H        4  17  18  30  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     107       E    13   19   68       C        4  11  18  30  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     108       K     4   18   68       C        4   5  11  21  27  34  43  55  62  71  75  78  81  88  92  94  97  98  98 100  
 LCS     109       L    13   18   68       C        4  15  18  21  27  33  39  47  59  71  75  78  81  88  92  94  97  98  98 100  
 LCS     110       S    13   17   68       C        7  13  18  21  28  33  43  57  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     111       N    13   16   68       H        7  14  18  24  37  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     112       E    13   16   68       H        7  15  18  24  30  43  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     113       E    13   16   68       H        7  15  18  26  37  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     114       M    13   16   68       H        7  15  18  30  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     115       D    13   16   68       H       10  15  18  26  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     116       E    13   16   68       H       10  15  18  30  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     117       L    13   16   68       H       10  15  18  21  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     118       L    13   16   68       H       10  15  18  21  27  34  53  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     119       K    13   16   68       H       10  15  18  21  24  33  47  57  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     120       G    13   16   68       H       10  15  18  21  27  34  42  56  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     121       V    13   16   68       C       10  15  18  21  27  34  40  43  59  66  75  78  81  85  92  94  97  98  98 100  
 LCS     122       P    12   16   68       C        0   5  14  21  27  34  40  43  59  66  75  78  81  84  92  94  97  98  98 100  
 LCS     123       V     5   16   68       C        4   8  10  14  26  33  47  57  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     124       K     5    7   68       C        4   5   7  10  14  23  30  36  46  55  63  71  78  81  85  92  97  98  98 100  
 LCS     125       D     5    7   68       C        4   5   7  10  11  18  23  27  34  44  63  69  73  76  85  85  97  98  98 100  
 LCS     126       G     5    7   68       C        4   5   7  10  15  24  46  57  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     127       M     5   13   68       C        4  13  18  30  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     128       V     3   13   68       C        4   5  14  21  37  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     129       N     3   13   68       C        4  13  18  30  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     130       Y    11   13   68       C        4  13  14  20  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     131       H    11   13   68       C       11  13  14  21  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     132       D    11   13   68       H       11  13  18  30  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     133       F    11   13   68       H       11  13  14  18  33  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     134       V    11   13   68       H       11  13  14  21  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     135       Q    11   13   68       H       11  13  18  30  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     136       M    11   13   68       H       11  13  18  30  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     137       I    11   13   68       H       11  13  18  28  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     138       L    11   13   68       C       11  13  17  30  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     139       A    11   13   68       C        5  13  18  30  39  49  55  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS     140       N    11   13   68       C        4   4  14  14  23  34  50  59  63  71  75  78  81  88  92  94  97  98  98 100  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):  14.28 
 
 NUMBER_OF_CA_Tg:   69      NUMBER_OF_CA_Pr:   69      PERCENT_OF_CA: 100.00  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max       9      12      13      21      27      34      38      41      44      49      52      54      56      61      64      65      67      68      68      69  
 GDT PERCENT_OF_CA_Pr   13.04   17.39   18.84   30.43   39.13   49.28   55.07   59.42   63.77   71.01   75.36   78.26   81.16   88.41   92.75   94.20   97.10   98.55   98.55  100.00 
 GDT PERCENT_OF_CA_Tg   13.04   17.39   18.84   30.43   39.13   49.28   55.07   59.42   63.77   71.01   75.36   78.26   81.16   88.41   92.75   94.20   97.10   98.55   98.55  100.00 
 GDT FRAGMENT: Beg-End  97-105  95-106  94-106  89-139  89-139  89-139  89-139  89-140  73-140  86-140  86-140  83-140  73-140  73-140  73-140  72-140  72-140  72-140  72-140  72-140 
 GDT RMS_LOCAL           0.33    0.58    0.70    1.57    1.83    2.09    2.25    2.41    2.65    3.08    3.33    3.53    3.69    4.32    4.50    4.57    4.76    4.88    4.88    5.03 
 GDT RMS_ALL_CA         10.44    9.45    9.07    5.68    5.52    5.56    5.63    5.68    5.60    5.80    5.91    5.77    5.58    5.08    5.09    5.07    5.06    5.04    5.04    5.03 
 
 
 TEST (CA)  RMS =   5.03               (Number of atoms:   69) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    5.03         69   100.0    69     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0729                            CRMSCA  
     SECONDARY STRUCTURE . .    4.63         36   100.0    36     CRMSCA  
     SURFACE . . . . . . . .    5.23         59   100.0    59     CRMSCA  
     BURIED  . . . . . . . .    3.66         10   100.0    10     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    5.10        337   100.0   337     CRMSMC  
     SECONDARY STRUCTURE . .    4.66        176   100.0   176     CRMSMC  
     SURFACE . . . . . . . .    5.30        290   100.0   290     CRMSMC  
     BURIED  . . . . . . . .    3.63         47   100.0    47     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    6.89        260    33.1   786     CRMSSC  
     RELIABLE SIDE CHAINS  .    7.18        216    29.1   742     CRMSSC  
     SECONDARY STRUCTURE . .    6.00        145    33.8   429     CRMSSC  
     SURFACE . . . . . . . .    7.14        234    34.0   689     CRMSSC  
     BURIED  . . . . . . . .    4.04         26    26.8    97     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    5.98        536    50.5  1062     CRMSALL 
     SECONDARY STRUCTURE . .    5.33        289    50.4   573     CRMSALL 
     SURFACE . . . . . . . .    6.23        470    50.8   925     CRMSALL 
     BURIED  . . . . . . . .    3.76         66    48.2   137     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    4.533      0.366       0.425     69   100.0    69     ERRCA  
     SECONDARY STRUCTURE . .    5.005      0.409       0.485     36   100.0    36     ERRCA  
     SURFACE . . . . . . . .    4.372      0.352       0.404     59   100.0    59     ERRCA  
     BURIED  . . . . . . . .    5.480      0.446       0.545     10   100.0    10     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    4.494      0.362       0.417    337   100.0   337     ERRMC  
     SECONDARY STRUCTURE . .    4.986      0.409       0.478    176   100.0   176     ERRMC  
     SURFACE . . . . . . . .    4.326      0.347       0.396    290   100.0   290     ERRMC  
     BURIED  . . . . . . . .    5.526      0.453       0.546     47   100.0    47     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    3.861      0.289       0.317    260    33.1   786     ERRSC  
     RELIABLE SIDE CHAINS  .    3.825      0.284       0.309    216    29.1   742     ERRSC  
     SECONDARY STRUCTURE . .    3.911      0.301       0.346    145    33.8   429     ERRSC  
     SURFACE . . . . . . . .    3.718      0.275       0.296    234    34.0   689     ERRSC  
     BURIED  . . . . . . . .    5.153      0.415       0.507     26    26.8    97     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    4.218      0.329       0.371    536    50.5  1062     ERRALL 
     SECONDARY STRUCTURE . .    4.475      0.358       0.415    289    50.4   573     ERRALL 
     SURFACE . . . . . . . .    4.049      0.313       0.349    470    50.8   925     ERRALL 
     BURIED  . . . . . . . .    5.418      0.442       0.534     66    48.2   137     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         8        18        46        68      69      69   DISTCA 
CA  (P)      0.00     11.59     26.09     66.67     98.55              69   DISTCA 
CA  (RMS)    0.00      1.57      2.21      3.40      4.89                   DISTCA 
 
ALL (N)         4        44       112       295       504     536    1062   DISTALL 
ALL (P)      0.38      4.14     10.55     27.78     47.46            1062   DISTALL 
ALL (RMS)    0.86      1.52      2.18      3.43      5.24                   DISTALL 
 
 
 
 
END of the results output 
