 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
#          The number of residues in SS section: 73 , MODEL 73 , TARGET 88 
#          The number of residues possible to evaluate: 73 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP    51     A     C     C             1.00 
 SSP    52     T     C     H             1.00 
 SSP    53     F     C     H             1.00 
 SSP    54     S     C     H             1.00 
 SSP    55     G     H     H             1.00 
 SSP    56     F     H     C             1.00 
 SSP    57     T     H     C             1.00 
 SSP  BREAK 
 SSP    73     T     C     C             1.00 
 SSP    74     E     H     C             1.00 
 SSP    75     T     H     H             1.00 
 SSP    76     H     H     H             1.00 
 SSP    77     V     H     H             1.00 
 SSP    78     R     H     H             1.00 
 SSP    79     D     H     H             1.00 
 SSP    80     W     H     H             1.00 
 SSP    81     V     H     H             1.00 
 SSP    82     M     H     H             1.00 
 SSP    83     W     H     H             1.00 
 SSP    84     A     H     H             1.00 
 SSP    85     V     H     H             1.00 
 SSP    86     N     H     H             1.00 
 SSP    87     E     H     H             1.00 
 SSP    88     F     C     H             1.00 
 SSP    89     S     C     H             1.00 
 SSP    90     L     C     H             1.00 
 SSP    91     K     C     C             1.00 
 SSP    92     G     C     C             1.00 
 SSP    93     V     C     C             1.00 
 SSP    94     D     C     C             1.00 
 SSP    95     F     H     C             1.00 
 SSP    96     Q     H     C             1.00 
 SSP    97     K     H     H             1.00 
 SSP    98     F     H     H             1.00 
 SSP    99     C     C     H             1.00 
 SSP   100     M     C     H             1.00 
 SSP   101     S     C     H             1.00 
 SSP   102     G     H     H             1.00 
 SSP   103     A     H     H             1.00 
 SSP   104     A     H     H             1.00 
 SSP   105     L     H     H             1.00 
 SSP   106     C     H     H             1.00 
 SSP   107     A     H     H             1.00 
 SSP   108     L     H     H             1.00 
 SSP   109     G     H     H             1.00 
 SSP   110     K     H     H             1.00 
 SSP   111     E     H     H             1.00 
 SSP   112     C     C     C             1.00 
 SSP   113     F     H     C             1.00 
 SSP   114     L     H     C             1.00 
 SSP   115     E     H     C             1.00 
 SSP   116     L     H     C             1.00 
 SSP   117     A     C     H             1.00 
 SSP   118     P     C     H             1.00 
 SSP   119     D     C     H             1.00 
 SSP   120     F     C     C             1.00 
 SSP   121     V     H     C             1.00 
 SSP   122     G     H     C             1.00 
 SSP   123     D     H     H             1.00 
 SSP   124     I     H     H             1.00 
 SSP   125     L     H     H             1.00 
 SSP   126     W     H     H             1.00 
 SSP   127     E     H     H             1.00 
 SSP   128     H     H     H             1.00 
 SSP   129     L     H     H             1.00 
 SSP   130     E     H     H             1.00 
 SSP   131     I     H     H             1.00 
 SSP   132     L     H     H             1.00 
 SSP   133     Q     C     H             1.00 
 SSP   134     K     C     H             1.00 
 SSP   135     E     C     H             1.00 
 SSP   136     D     C     C             1.00 
 SSP   137     V     C     C             1.00 
 SSP   138     K     C     C             1.00 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              64.4      76.6      0.0     42.3     83.0 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        69.1      80.7    100.0     48.0     83.0 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG            6              83.3               0.0 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 1 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00      73    100.0     64.4 
 
 BIN  0.00 - 1.00      1.00      73    100.0     64.4 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
 
 CONSIDERED - explicitly provided contacts (with positive confidence) or 
              non contacts (with negative confidence) possible to evaluate 
 SEP      - Minimum separation between residues considered 
 NPC      - Number of contacts predicted correctly 
 PC(P)    - Percent of contacts predicted correctly from CONSIDERED in PREDICTION 
 PC(T)    - Percent of contacts predicted correctly from CONSIDERED in TARGET with SEP limit 
 PC(TT)   - Percent of contacts predicted correctly from TOTAL in TARGET with SEP limit 
 
                        CONSIDERED     CONSIDERED       TOTAL          TOTAL 
                      in PREDICTION    in TARGET    in PREDICTION    in TARGET 
 ALL RESIDUES USED          73              73            83             88 
 ALL CONTACTS (< 8.0A)     338             285           402            372 
 
               in PREDICTION      Predicted correctly          Submitted as        in TARGET 
                CONSIDERED     NPC   PC(P)   PC(T)   PC(TT)    NOT  predicted   CONSIDERED  TOTAL  |   SEP 
 RES CONTACTS       338        194   57.40   68.07   52.15       0     0.00         285       372  |   1-9999 
 RES CONTACTS       227        189   83.26   87.10   71.32       0     0.00         217       265  |   1-4    
 RES CONTACTS        11          2   18.18   11.11    7.41       0     0.00          18        27  |   5-8    
 RES CONTACTS       100          3    3.00    6.00    3.75       0     0.00          50        80  |   9-9999 
 
 
 
# WARNING! TARGET 982 atoms, MODEL 628 atoms, 492 common with TARGET 
           Number of atoms possible to evaluate: 360 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    66.16           62.0   142    81.6   174     ARMSMC  
     SECONDARY STRUCTURE . .    41.74           77.9    77    89.5    86     ARMSMC  
     SURFACE . . . . . . . .    71.07           55.9   102    79.7   128     ARMSMC  
     BURIED  . . . . . . . .    51.59           77.5    40    87.0    46     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    76     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    70     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    35     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    60     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    16     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    60     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    48     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    28     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    47     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    13     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    25     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    20     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    12     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    25     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    10     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    10     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0     3     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    10     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1   51 - 57   7    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7     51 - 57       1.85     1.85 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   73 - 138  66   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    37    101 - 137      4.99    13.27 
  LCS LOCAL_SCORE:             46.10 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1   51 - 57   7    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7     51 - 57       1.85     1.85 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   73 - 138  66   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    17     73 - 89       1.61    12.67 
  LCS LOCAL_SCORE:             16.71 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1   51 - 57   7    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6     52 - 57       0.80     2.40 
  LCS LOCAL_SCORE:             79.59 
 
 FRAGMENT  2   73 - 138  66   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    15     74 - 88       1.00    13.04 
  LONGEST_CONTINUOUS_SEGMENT    15     75 - 89       0.95    13.10 
  LCS LOCAL_SCORE:             13.29 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS      51       A     3    7    7       C        3   3   3   3   5   7   7   7   7   7   7   7   7   7   7   7   7  11  13  14  
 LCS      52       T     6    7    7       C        3   4   6   6   6   7   7   7   7   7   7   7   7   7   7   7   9  11  13  14  
 LCS      53       F     6    7    7       C        4   5   6   6   6   7   7   7   7   7   7   7   7   7   7   7   7   7   9  11  
 LCS      54       S     6    7    7       C        4   5   6   6   6   7   7   7   7   7   7   7   7   7   7   7   9  11  13  14  
 LCS      55       G     6    7    7       H        4   5   6   6   6   7   7   7   7   7   7   7   7   7   7   7   9  11  13  14  
 LCS      56       F     6    7    7       H        4   5   6   6   6   7   7   7   7   7   7   7   7   7  17  17  23  26  28  30  
 LCS      57       T     6    7    7       H        4   5   6   6   6   7   7   7   7   7   7   7   7   7  18  21  23  26  28  30  
 LCS      58       K     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      59       E     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      60       Q     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      61       Q     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      62       R     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      63       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      64       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      65       I     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      66       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      67       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      68       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      69       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      70       R     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      71       Q     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      72       W     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      73       T     3   17   22       C        0   3   5  10  13  15  19  20  20  21  23  23  27  29  34  36  42  43  46  46  
 LCS      74       E    15   17   22       H        3  10  15  18  18  19  20  20  21  25  32  35  37  38  40  43  44  45  46  46  
 LCS      75       T    15   17   22       H        3  12  17  18  18  19  20  20  23  27  32  35  37  38  40  43  44  45  46  46  
 LCS      76       H    15   17   22       H        6  11  17  18  18  19  20  20  21  25  28  31  35  37  40  43  44  45  46  46  
 LCS      77       V    15   17   22       H        7  11  17  18  18  19  20  20  23  27  29  35  37  38  40  43  44  45  46  46  
 LCS      78       R    15   17   22       H        7  12  17  18  18  19  20  20  25  27  32  35  37  38  40  43  44  45  46  46  
 LCS      79       D    15   17   22       H        7  12  17  18  18  19  20  20  23  27  29  32  37  38  40  43  44  45  46  46  
 LCS      80       W    15   17   22       H        7  12  17  18  18  19  20  20  23  25  28  31  35  37  40  43  44  45  46  46  
 LCS      81       V    15   17   22       H        7  12  17  18  18  19  20  20  23  26  29  32  35  38  40  43  44  45  46  46  
 LCS      82       M    15   17   22       H        7  12  17  18  18  19  20  20  23  23  26  29  34  37  39  42  44  45  46  46  
 LCS      83       W    15   17   22       H        7  12  17  18  18  19  20  20  21  21  23  26  30  36  38  42  43  45  46  46  
 LCS      84       A    15   17   22       H        5  12  17  18  18  19  20  20  21  21  23  26  28  31  36  42  43  45  46  46  
 LCS      85       V    15   17   22       H        5  12  17  18  18  19  20  20  21  21  23  26  28  31  38  42  43  45  46  46  
 LCS      86       N    15   17   22       H        7  12  17  18  18  19  20  20  21  21  23  26  28  34  38  42  43  45  46  46  
 LCS      87       E    15   17   22       H        7  12  17  18  18  19  20  20  21  21  23  26  28  31  36  38  43  45  46  46  
 LCS      88       F    15   17   22       C        5  10  17  18  18  19  20  20  21  21  23  26  27  29  35  38  42  45  46  46  
 LCS      89       S    15   17   22       C        3  11  17  18  18  19  20  20  21  21  23  26  27  29  35  38  42  45  46  46  
 LCS      90       L     3    3   22       C        3   4   4   4   4   9  12  18  19  21  23  23  27  28  30  31  35  38  40  43  
 LCS      91       K     3    3   22       C        0   4   4   4   4   4   4   9  12  15  19  21  26  28  30  31  35  38  40  42  
 LCS      92       G     3    3   22       C        3   3   3   4   7  12  13  18  19  21  23  23  26  28  30  31  35  38  40  43  
 LCS      93       V     3    5   22       C        3   3   3   3   6   6   7  11  13  15  19  20  26  28  30  31  35  38  40  43  
 LCS      94       D     3    5   22       C        3   3   3   3   6   6   7  11  13  15  17  20  23  26  30  31  35  38  40  42  
 LCS      95       F     3    5   20       H        3   3   3   3   4   6   7  11  13  17  21  25  28  31  35  42  43  43  46  48  
 LCS      96       Q     4    5   20       H        3   4   4   5   6   7  11  11  13  17  21  25  28  31  35  42  43  43  46  48  
 LCS      97       K     4    5   20       H        3   4   4   4   5   7  10  11  12  15  20  26  28  31  39  42  43  43  46  48  
 LCS      98       F     4    4   20       H        3   4   4   5   5   7  13  19  23  27  31  36  36  37  39  42  43  44  46  48  
 LCS      99       C     4    4   20       C        3   4   4   4   6   6   7   9  12  17  21  22  26  30  35  42  43  43  46  48  
 LCS     100       M     3    9   19       C        1   3   3   6   6   9  11  12  14  17  21  25  28  31  39  42  43  43  46  48  
 LCS     101       S     8   12   37       C        4   7   9   9  12  13  13  14  26  29  34  36  36  37  39  42  43  43  46  48  
 LCS     102       G     8   12   37       H        4   7   9  12  12  13  13  13  15  19  21  25  28  30  37  39  40  43  46  48  
 LCS     103       A     8   12   37       H        5   7   9  12  12  13  13  13  14  14  17  20  28  30  34  37  40  43  46  48  
 LCS     104       A     8   12   37       H        5   7   9  12  12  13  13  18  26  29  34  36  36  37  39  42  43  43  46  48  
 LCS     105       L     8   12   37       H        5   7  10  14  19  20  22  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     106       C     8   12   37       H        5   7   9  12  12  19  21  23  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     107       A     8   12   37       H        5   7   9  12  12  17  21  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     108       L     8   12   37       H        5   6   9  12  13  17  21  26  29  31  34  36  36  37  39  42  43  45  46  48  
 LCS     109       G     7   12   37       H        5   6   7  12  12  18  22  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     110       K     7   12   37       H        5   6   7  12  12  18  19  22  27  30  32  36  37  38  40  43  44  45  46  48  
 LCS     111       E     7   12   37       H        5   6   7  12  12  13  13  13  15  23  27  34  36  37  39  42  43  43  46  48  
 LCS     112       C     7   12   37       C        5   6   7  12  12  13  13  13  14  19  21  22  26  37  37  39  40  43  44  48  
 LCS     113       F     6    6   37       H        4  10  14  14  19  20  22  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     114       L     6    6   37       H        4   5   6  14  19  20  22  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     115       E     6    6   37       H        4   7  10  14  19  20  22  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     116       L     6    6   37       H        4   5   7  12  17  20  22  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     117       A     6    6   37       C        4   7  10  14  19  20  22  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     118       P     6    6   37       C        3   4   6  10  13  15  21  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     119       D     4    5   37       C        3   4   4   4   5   6  10  10  10  21  23  29  32  36  39  43  44  45  46  48  
 LCS     120       F     4    5   37       C        3   4   5  11  13  15  17  20  23  29  31  35  37  38  40  43  44  45  46  48  
 LCS     121       V     4   13   37       H        3   4   6   7   7  19  22  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     122       G    12   13   37       H        4  12  14  14  19  20  22  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     123       D    12   13   37       H        9  12  14  14  19  20  22  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     124       I    12   13   37       H        4  12  14  14  19  20  22  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     125       L    12   13   37       H        9  12  14  14  19  20  22  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     126       W    12   13   37       H        9  12  14  14  19  20  22  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     127       E    12   13   37       H        9  12  14  14  19  20  22  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     128       H    12   13   37       H        9  12  14  14  19  20  22  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     129       L    12   13   37       H        9  12  14  14  19  20  22  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     130       E    12   13   37       H        9  12  14  14  19  20  22  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     131       I    12   13   37       H        9  12  14  14  19  20  22  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     132       L    12   13   37       H        9  12  14  14  19  20  22  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     133       Q    12   13   37       C        4  11  14  14  19  20  22  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     134       K     3   13   37       C        3   4   7   9  11  17  21  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     135       E     3    4   37       C        3   3   3   3   6   7  12  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     136       D     3    4   37       C        3   3   3   3   4   7  21  26  29  31  34  36  37  37  39  43  44  45  46  48  
 LCS     137       V     3    4   37       C        3   3   3   3   3   6   9  26  29  31  34  36  37  38  40  43  44  45  46  48  
 LCS     138       K     3    4   36       C        0   3   3   3   3   4   4   5   5   5   7  10  11  11  12  39  40  45  46  48  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   7.98 
 
 NUMBER_OF_CA_Tg:   88      NUMBER_OF_CA_Pr:   73      PERCENT_OF_CA:  82.95  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max       8      11      15      16      17      18      20      23      26      28      30      32      33      34      36      38      39      40      41      43  
 GDT PERCENT_OF_CA_Pr   10.96   15.07   20.55   21.92   23.29   24.66   27.40   31.51   35.62   38.36   41.10   43.84   45.21   46.58   49.32   52.05   53.42   54.79   56.16   58.90 
 GDT PERCENT_OF_CA_Tg    9.09   12.50   17.05   18.18   19.32   20.45   22.73   26.14   29.55   31.82   34.09   36.36   37.50   38.64   40.91   43.18   44.32   45.45   46.59   48.86 
 GDT FRAGMENT: Beg-End 123-132 122-132  75-89   74-89  105-133 105-133 105-133 105-134 105-136 105-137 101-137  98-137  74-137  74-137  74-137  74-137  74-137  74-137  74-138  95-138 
 GDT RMS_LOCAL           0.33    0.58    0.95    1.02    1.71    1.85    2.19    2.65    3.06    3.26    3.53    3.81    4.53    4.68    4.93    5.17    5.30    5.44    5.58    6.02 
 GDT RMS_ALL_CA         15.89   15.85   16.36   16.32   16.17   16.16   15.95   16.24   16.54   16.58   16.92   17.04   15.47   15.33   15.30   15.36   15.34   15.34   15.35   17.96 
 
 
 TEST (CA)  RMS =  14.28               (Number of atoms:   73) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   14.28         73    83.0    88     CRMSCA  
     CRN = ALL/NP  . . . . .    0.1956                            CRMSCA  
     SECONDARY STRUCTURE . .   11.80         39    90.7    43     CRMSCA  
     SURFACE . . . . . . . .   15.20         53    81.5    65     CRMSCA  
     BURIED  . . . . . . . .   11.48         20    87.0    23     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   14.26        360    82.9   434     CRMSMC  
     SECONDARY STRUCTURE . .   11.67        191    90.5   211     CRMSMC  
     SURFACE . . . . . . . .   15.22        264    81.7   323     CRMSMC  
     BURIED  . . . . . . . .   11.19         96    86.5   111     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   14.64         68    10.8   630     CRMSSC  
     RELIABLE SIDE CHAINS  .   14.64         68    11.7   580     CRMSSC  
     SECONDARY STRUCTURE . .   11.60         35    11.6   302     CRMSSC  
     SURFACE . . . . . . . .   15.85         52    11.3   460     CRMSSC  
     BURIED  . . . . . . . .    9.73         16     9.4   170     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   14.26        360    36.7   982     CRMSALL 
     SECONDARY STRUCTURE . .   11.67        191    40.3   474     CRMSALL 
     SURFACE . . . . . . . .   15.22        264    36.7   720     CRMSALL 
     BURIED  . . . . . . . .   11.19         96    36.6   262     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    6.242      0.297       0.154     73    83.0    88     ERRCA  
     SECONDARY STRUCTURE . .    3.923      0.199       0.101     39    90.7    43     ERRCA  
     SURFACE . . . . . . . .    6.990      0.311       0.163     53    81.5    65     ERRCA  
     BURIED  . . . . . . . .    4.257      0.260       0.131     20    87.0    23     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    6.223      0.295       0.152    360    82.9   434     ERRMC  
     SECONDARY STRUCTURE . .    3.840      0.196       0.100    191    90.5   211     ERRMC  
     SURFACE . . . . . . . .    7.008      0.312       0.161    264    81.7   323     ERRMC  
     BURIED  . . . . . . . .    4.064      0.250       0.126     96    86.5   111     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    6.534      0.303       0.158     68    10.8   630     ERRSC  
     RELIABLE SIDE CHAINS  .    6.534      0.303       0.158     68    11.7   580     ERRSC  
     SECONDARY STRUCTURE . .    3.768      0.189       0.097     35    11.6   302     ERRSC  
     SURFACE . . . . . . . .    7.586      0.328       0.171     52    11.3   460     ERRSC  
     BURIED  . . . . . . . .    3.116      0.222       0.116     16     9.4   170     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    6.223      0.295       0.152    360    36.7   982     ERRALL 
     SECONDARY STRUCTURE . .    3.840      0.196       0.100    191    40.3   474     ERRALL 
     SURFACE . . . . . . . .    7.008      0.312       0.161    264    36.7   720     ERRALL 
     BURIED  . . . . . . . .    4.064      0.250       0.126     96    36.6   262     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         0         0         2        26      73      88   DISTCA 
CA  (P)      0.00      0.00      0.00      2.27     29.55              88   DISTCA 
CA  (RMS)    0.00      0.00      0.00      4.03      8.08                   DISTCA 
 
ALL (N)         0         0         0         5       131     360     982   DISTALL 
ALL (P)      0.00      0.00      0.00      0.51     13.34             982   DISTALL 
ALL (RMS)    0.00      0.00      0.00      3.94      8.12                   DISTALL 
 
 
 
 
END of the results output 
