 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
#          The number of residues in SS section: 49 , MODEL 49 , TARGET 95 
#          The number of residues possible to evaluate: 49 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP   126     P     H     C             1.00 
 SSP   127     E     H     H             1.00 
 SSP   128     D     H     H             1.00 
 SSP   129     K     H     H             1.00 
 SSP   130     A     H     H             1.00 
 SSP   131     K     H     H             1.00 
 SSP   132     Y     H     H             1.00 
 SSP   133     D     H     H             1.00 
 SSP   134     A     H     H             1.00 
 SSP   135     I     H     H             1.00 
 SSP   136     F     H     H             1.00 
 SSP   137     D     C     H             1.00 
 SSP   138     S     C     H             1.00 
 SSP   139     L     C     C             1.00 
 SSP  BREAK 
 SSP   154     V     H     C             1.00 
 SSP   155     L     H     C             1.00 
 SSP   156     L     H     C             1.00 
 SSP  BREAK 
 SSP   162     V     H     C             1.00 
 SSP   163     D     H     H             1.00 
 SSP   164     I     H     H             1.00 
 SSP   165     L     H     H             1.00 
 SSP   166     G     H     H             1.00 
 SSP   167     R     H     H             1.00 
 SSP   168     V     H     H             1.00 
 SSP   169     W     H     H             1.00 
 SSP   170     E     H     H             1.00 
 SSP   171     L     H     H             1.00 
 SSP   172     S     H     H             1.00 
 SSP   173     D     C     H             1.00 
 SSP   174     I     C     C             1.00 
 SSP  BREAK 
 SSP   185     F     H     C             1.00 
 SSP   186     A     H     H             1.00 
 SSP   187     V     H     H             1.00 
 SSP   188     A     H     H             1.00 
 SSP   189     M     H     H             1.00 
 SSP   190     F     H     H             1.00 
 SSP   191     L     H     H             1.00 
 SSP   192     V     H     H             1.00 
 SSP   193     Y     H     H             1.00 
 SSP   194     C     H     H             1.00 
 SSP   195     A     H     H             1.00 
 SSP   196     L     H     C             1.00 
 SSP  BREAK 
 SSP   203     M     C     C             1.00 
 SSP   204     S     C     C             1.00 
 SSP   205     L     C     C             1.00 
 SSP   206     P     C     C             1.00 
 SSP  BREAK 
 SSP   213     S     C     C             1.00 
 SSP   214     K     C     C             1.00 
 SSP   215     R     C     C             1.00 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              79.6      81.1      0.0     75.0     51.6 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        87.8      91.9    100.0     75.0     51.6 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG            4              75.0               0.0 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00      49    100.0     79.6 
 
 BIN  0.00 - 1.00      1.00      49    100.0     79.6 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
 
 CONSIDERED - explicitly provided contacts (with positive confidence) or 
              non contacts (with negative confidence) possible to evaluate 
 SEP      - Minimum separation between residues considered 
 NPC      - Number of contacts predicted correctly 
 PC(P)    - Percent of contacts predicted correctly from CONSIDERED in PREDICTION 
 PC(T)    - Percent of contacts predicted correctly from CONSIDERED in TARGET with SEP limit 
 PC(TT)   - Percent of contacts predicted correctly from TOTAL in TARGET with SEP limit 
 
                        CONSIDERED     CONSIDERED       TOTAL          TOTAL 
                      in PREDICTION    in TARGET    in PREDICTION    in TARGET 
 ALL RESIDUES USED          49              49            52             95 
 ALL CONTACTS (< 8.0A)     190             191           202            454 
 
               in PREDICTION      Predicted correctly          Submitted as        in TARGET 
                CONSIDERED     NPC   PC(P)   PC(T)   PC(TT)    NOT  predicted   CONSIDERED  TOTAL  |   SEP 
 RES CONTACTS       190        137   72.11   71.73   30.18       0     0.00         191       454  |   1-9999 
 RES CONTACTS       136        134   98.53  100.00   46.05       0     0.00         134       291  |   1-4    
 RES CONTACTS         5          0    0.00    0.00    0.00       0     0.00           1        31  |   5-8    
 RES CONTACTS        49          3    6.12    5.36    2.27       0     0.00          56       132  |   9-9999 
 
 
 
# WARNING! TARGET 1494 atoms, MODEL 612 atoms, 596 common with TARGET 
           Number of atoms possible to evaluate: 244 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    39.18           68.6    86    45.7   188     ARMSMC  
     SECONDARY STRUCTURE . .    34.22           75.0    68    72.3    94     ARMSMC  
     SURFACE . . . . . . . .    34.60           65.0    40    35.7   112     ARMSMC  
     BURIED  . . . . . . . .    42.77           71.7    46    60.5    76     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    84     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    74     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    40     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    49     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    35     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    66     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    51     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    32     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    42     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    24     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    19     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    19     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    11     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    16     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     3     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    11     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    11     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0     6     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    10     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     1     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1  126 - 139  14   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    14    126 - 139      0.60     0.60 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2  154 - 156  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    154 - 156      0.65     0.65 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3  162 - 174  13   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    13    162 - 174      0.89     0.89 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  4  185 - 196  12   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    12    185 - 196      0.38     0.38 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  5  203 - 206  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    203 - 206      0.63     0.63 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  6  213 - 215  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    213 - 215      0.03     0.03 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1  126 - 139  14   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    14    126 - 139      0.60     0.60 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2  154 - 156  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    154 - 156      0.65     0.65 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3  162 - 174  13   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    13    162 - 174      0.89     0.89 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  4  185 - 196  12   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    12    185 - 196      0.38     0.38 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  5  203 - 206  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    203 - 206      0.63     0.63 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  6  213 - 215  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    213 - 215      0.03     0.03 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1  126 - 139  14   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    14    126 - 139      0.60     0.60 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2  154 - 156  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    154 - 156      0.65     0.65 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3  162 - 174  13   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    13    162 - 174      0.89     0.89 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  4  185 - 196  12   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    12    185 - 196      0.38     0.38 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  5  203 - 206  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    203 - 206      0.63     0.63 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  6  213 - 215  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    213 - 215      0.03     0.03 
  LCS LOCAL_SCORE:            100.00 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS     126       P    14   14   14       H       11  13  14  14  15  15  15  17  17  18  21  22  23  24  25  25  26  30  30  31  
 LCS     127       E    14   14   14       H       11  13  14  14  14  15  15  16  17  17  18  22  23  24  25  25  26  30  30  31  
 LCS     128       D    14   14   14       H       11  13  14  14  15  15  15  16  17  18  20  22  23  24  25  25  26  30  30  31  
 LCS     129       K    14   14   14       H       11  13  14  14  14  15  15  17  17  18  21  22  23  24  25  25  26  30  30  31  
 LCS     130       A    14   14   14       H       11  13  14  14  14  15  15  16  17  17  21  22  23  24  25  25  26  30  30  31  
 LCS     131       K    14   14   14       H       11  13  14  14  14  15  15  16  17  17  18  22  23  24  25  25  26  30  30  31  
 LCS     132       Y    14   14   14       H       11  13  14  14  14  15  15  17  17  18  21  22  23  24  25  25  26  30  30  31  
 LCS     133       D    14   14   14       H       11  13  14  14  14  15  15  16  17  17  18  20  21  22  25  25  26  30  30  31  
 LCS     134       A    14   14   14       H       11  13  14  14  14  15  15  16  17  17  18  20  21  22  23  24  26  30  30  31  
 LCS     135       I    14   14   14       H       11  13  14  14  14  15  15  16  17  17  18  20  22  23  25  25  26  30  30  31  
 LCS     136       F    14   14   14       H       10  13  14  14  14  15  15  16  17  17  18  20  21  22  25  25  26  30  30  31  
 LCS     137       D    14   14   14       C       11  13  14  14  14  15  15  16  17  17  18  20  21  22  23  24  25  27  28  31  
 LCS     138       S    14   14   14       C       10  13  14  14  14  15  15  16  17  17  18  20  21  21  22  24  25  27  27  30  
 LCS     139       L    14   14   14       C        3  10  14  14  14  15  15  16  17  17  18  20  21  21  22  24  26  30  30  31  
 LCS     140       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     141       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     142       V     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     143       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     144       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     145       F     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     146       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     147       S     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     148       G     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     149       D     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     150       K     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     151       V     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     152       K     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     153       P     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     154       V     3    3    3       H        1   3   3   3  14  15  15  17  17  17  21  22  23  24  25  25  26  30  30  31  
 LCS     155       L     3    3    3       H        0   3   3   3  14  15  15  17  17  18  21  22  23  24  25  25  26  30  30  31  
 LCS     156       L     3    3    3       H        0   3   5   8   8  14  15  17  17  18  21  22  23  24  25  25  26  30  30  31  
 LCS     157       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     158       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     159       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     160       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     161       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     162       V    13   13   13       H        8  12  14  14  15  15  15  17  17  18  21  22  23  24  25  25  26  30  30  31  
 LCS     163       D    13   13   13       H        8  12  14  14  15  15  15  17  17  18  21  22  23  24  25  25  26  30  30  31  
 LCS     164       I    13   13   13       H        6  12  14  14  15  15  15  17  17  18  21  22  23  24  25  25  26  30  30  31  
 LCS     165       L    13   13   13       H        6  12  14  14  15  15  15  17  17  18  21  22  23  24  25  25  26  30  30  31  
 LCS     166       G    13   13   13       H        8  12  14  14  15  15  15  17  17  18  21  22  23  24  25  25  26  30  30  31  
 LCS     167       R    13   13   13       H        8  12  14  14  15  15  15  17  17  18  21  22  23  24  25  25  26  30  30  31  
 LCS     168       V    13   13   13       H        8  12  14  14  15  15  15  17  17  18  21  22  23  24  25  25  26  30  30  31  
 LCS     169       W    13   13   13       H        8  12  14  14  15  15  15  17  17  18  21  22  23  24  25  25  26  30  30  31  
 LCS     170       E    13   13   13       H        8  12  14  14  15  15  15  17  17  18  21  22  23  24  25  25  26  30  30  31  
 LCS     171       L    13   13   13       H        8  12  14  14  15  15  15  17  17  18  21  22  23  24  25  25  26  30  30  31  
 LCS     172       S    13   13   13       H        6  12  14  14  15  15  15  17  17  18  21  22  23  24  25  25  26  30  30  31  
 LCS     173       D    13   13   13       C        4  12  14  14  15  15  15  16  17  18  21  22  23  24  24  25  25  26  27  27  
 LCS     174       I    13   13   13       C        3   7   9  14  15  15  15  16  17  18  21  22  23  24  24  25  25  26  27  27  
 LCS     175       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     176       H     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     177       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     178       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     179       M     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     180       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     181       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     182       R     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     183       D     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     184       E     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     185       F    12   12   12       H       11  12  12  12  12  12  13  13  13  14  14  15  20  23  24  25  25  26  26  27  
 LCS     186       A    12   12   12       H       11  12  12  12  12  12  13  13  13  14  14  17  22  23  24  25  25  26  26  27  
 LCS     187       V    12   12   12       H       11  12  12  12  12  12  13  13  13  14  14  17  22  23  24  25  25  26  26  27  
 LCS     188       A    12   12   12       H       11  12  12  12  12  12  13  13  13  14  14  15  22  23  24  25  25  26  26  27  
 LCS     189       M    12   12   12       H       11  12  12  12  12  12  13  13  13  14  14  17  22  23  24  25  25  26  26  27  
 LCS     190       F    12   12   12       H       11  12  12  12  12  12  13  13  13  14  14  17  22  23  24  25  25  26  26  27  
 LCS     191       L    12   12   12       H       11  12  12  12  12  12  13  13  13  14  14  17  22  23  24  25  25  27  27  30  
 LCS     192       V    12   12   12       H       11  12  12  12  12  12  13  13  13  14  14  15  22  23  24  25  25  27  27  29  
 LCS     193       Y    12   12   12       H       11  12  12  12  12  12  13  13  13  14  14  15  22  23  24  25  25  26  26  29  
 LCS     194       C    12   12   12       H       11  12  12  12  12  12  13  14  17  17  18  20  22  23  24  25  25  27  27  29  
 LCS     195       A    12   12   12       H       11  12  12  12  12  12  14  15  17  17  18  20  22  23  24  25  25  27  27  29  
 LCS     196       L    12   12   12       H       11  12  12  12  12  12  13  16  17  17  18  20  21  22  24  24  25  26  26  27  
 LCS     197       E     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     198       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     199       E     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     200       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     201       V     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     202       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     203       M     4    4    4       C        3   4   4   4   5   6  13  13  13  14  15  16  20  22  23  24  25  27  27  30  
 LCS     204       S     4    4    4       C        3   4   4   4   4   5   9  12  12  14  15  16  20  22  23  24  25  27  27  29  
 LCS     205       L     4    4    4       C        3   4   4   4   4   5   9  10  12  13  15  16  20  22  23  24  25  27  27  30  
 LCS     206       P     4    4    4       C        3   4   4   4   4   5   5   5  11  13  15  15  20  22  23  24  25  27  27  29  
 LCS     207       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     208       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     209       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     210       V     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     211       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     212       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     213       S     3    3    3       C        3   3   3   3   4   4   4   4   5   7   7   7   7   7  10  24  26  30  30  31  
 LCS     214       K     3    3    3       C        3   3   3   3   3   5   5   5   5   7   7   7   8  16  21  24  26  30  30  31  
 LCS     215       R     3    3    3       C        3   3   3   3   3   3   3   4   4   7   7   7  14  16  21  24  26  30  30  31  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   6.02 
 
 NUMBER_OF_CA_Tg:   95      NUMBER_OF_CA_Pr:   49      PERCENT_OF_CA:  51.58  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max      11      13      14      14      15      15      15      17      17      18      20      21      22      23      24      24      25      29      29      30  
 GDT PERCENT_OF_CA_Pr   22.45   26.53   28.57   28.57   30.61   30.61   30.61   34.69   34.69   36.73   40.82   42.86   44.90   46.94   48.98   48.98   51.02   59.18   59.18   61.22 
 GDT PERCENT_OF_CA_Tg   11.58   13.68   14.74   14.74   15.79   15.79   15.79   17.89   17.89   18.95   21.05   22.11   23.16   24.21   25.26   25.26   26.32   30.53   30.53   31.58 
 GDT FRAGMENT: Beg-End 185-196 126-138 126-139 126-139 126-174 126-154 126-154 126-172 126-174 126-174 126-174 126-174 126-174 126-174 126-172 126-174 126-214 126-215 126-215 126-215 
 GDT RMS_LOCAL           0.36    0.42    0.60    0.60    1.18    1.07    1.07    2.64    2.38    2.59    3.25    3.40    3.64    3.92    4.95    4.24    5.51    6.45    6.45    6.68 
 GDT RMS_ALL_CA         19.26   18.87   18.78   18.78   13.94   20.07   20.07   13.88   13.94   13.87   14.02   13.88   13.86   13.88   13.61   13.89   13.38   13.11   13.11   13.09 
 
 
 TEST (CA)  RMS =  11.87               (Number of atoms:   49) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   11.87         49    51.6    95     CRMSCA  
     CRN = ALL/NP  . . . . .    0.2423                            CRMSCA  
     SECONDARY STRUCTURE . .   11.49         37    78.7    47     CRMSCA  
     SURFACE . . . . . . . .   10.77         24    42.1    57     CRMSCA  
     BURIED  . . . . . . . .   12.84         25    65.8    38     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   12.13        244    51.8   471     CRMSMC  
     SECONDARY STRUCTURE . .   11.67        184    79.0   233     CRMSMC  
     SURFACE . . . . . . . .   11.10        119    42.3   281     CRMSMC  
     BURIED  . . . . . . . .   13.04        125    65.8   190     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   12.07         48     4.3  1114     CRMSSC  
     RELIABLE SIDE CHAINS  .   12.07         48     4.5  1062     CRMSSC  
     SECONDARY STRUCTURE . .   11.77         36     6.3   573     CRMSSC  
     SURFACE . . . . . . . .   10.77         23     3.6   638     CRMSSC  
     BURIED  . . . . . . . .   13.16         25     5.3   476     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   12.13        244    16.3  1494     CRMSALL 
     SECONDARY STRUCTURE . .   11.67        184    24.2   761     CRMSALL 
     SURFACE . . . . . . . .   11.10        119    13.7   866     CRMSALL 
     BURIED  . . . . . . . .   13.04        125    19.9   628     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   12.219      0.487       0.449     49    51.6    95     ERRCA  
     SECONDARY STRUCTURE . .   11.723      0.490       0.453     37    78.7    47     ERRCA  
     SURFACE . . . . . . . .   12.049      0.479       0.454     24    42.1    57     ERRCA  
     BURIED  . . . . . . . .   12.382      0.495       0.444     25    65.8    38     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   12.088      0.481       0.443    244    51.8   471     ERRMC  
     SECONDARY STRUCTURE . .   11.574      0.485       0.446    184    79.0   233     ERRMC  
     SURFACE . . . . . . . .   11.786      0.468       0.447    119    42.3   281     ERRMC  
     BURIED  . . . . . . . .   12.375      0.494       0.439    125    65.8   190     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   12.028      0.478       0.442     48     4.3  1114     ERRSC  
     RELIABLE SIDE CHAINS  .   12.028      0.478       0.442     48     4.5  1062     ERRSC  
     SECONDARY STRUCTURE . .   11.413      0.475       0.437     36     6.3   573     ERRSC  
     SURFACE . . . . . . . .   11.875      0.475       0.458     23     3.6   638     ERRSC  
     BURIED  . . . . . . . .   12.168      0.481       0.427     25     5.3   476     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   12.088      0.481       0.443    244    16.3  1494     ERRALL 
     SECONDARY STRUCTURE . .   11.574      0.485       0.446    184    24.2   761     ERRALL 
     SURFACE . . . . . . . .   11.786      0.468       0.447    119    13.7   866     ERRALL 
     BURIED  . . . . . . . .   12.375      0.494       0.439    125    19.9   628     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         0         0         5        24      49      95   DISTCA 
CA  (P)      0.00      0.00      0.00      5.26     25.26              95   DISTCA 
CA  (RMS)    0.00      0.00      0.00      3.63      6.84                   DISTCA 
 
ALL (N)         0         0         2        27       111     244    1494   DISTALL 
ALL (P)      0.00      0.00      0.13      1.81      7.43            1494   DISTALL 
ALL (RMS)    0.00      0.00      2.88      3.97      6.65                   DISTALL 
 
 
 
 
END of the results output 
