 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
#          The number of residues in SS section: 204 , MODEL 204 , TARGET 237 
#          The number of residues possible to evaluate: 204 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP     2     E     C     C             1.00 
 SSP     3     D     C     H             1.00 
 SSP     4     N     C     H             1.00 
 SSP     5     F     H     H             1.00 
 SSP     6     A     H     H             1.00 
 SSP     7     R     H     C             1.00 
 SSP     8     F     H     E             1.00 
 SSP     9     V     C     E             1.00 
 SSP    10     C     C     E             1.00 
 SSP    11     K     C     E             1.00 
 SSP    12     N     C     C             1.00 
 SSP    13     N     C     C             1.00 
 SSP    14     G     E     C             1.00 
 SSP    15     V     E     C             1.00 
 SSP    16     L     E     C             1.00 
 SSP    17     F     E     C             1.00 
 SSP    18     E     E     C             1.00 
 SSP    19     N     C     C             1.00 
 SSP    20     Q     C     C             1.00 
 SSP    21     L     C     C             1.00 
 SSP    22     L     E     C             1.00 
 SSP    23     Q     E     C             1.00 
 SSP    24     I     E     C             1.00 
 SSP    25     G     E     C             1.00 
 SSP    26     L     E     H             1.00 
 SSP    27     K     E     H             1.00 
 SSP    28     S     E     H             1.00 
 SSP    29     E     E     H             1.00 
 SSP    30     F     E     H             1.00 
 SSP    31     R     E     H             1.00 
 SSP    32     Q     C     H             1.00 
 SSP    33     N     C     H             1.00 
 SSP    34     L     E     H             1.00 
 SSP    35     G     E     H             1.00 
 SSP    36     R     E     H             1.00 
 SSP    37     M     E     H             1.00 
 SSP    38     F     E     C             1.00 
 SSP  BREAK 
 SSP    53     T     E     C             1.00 
 SSP    54     P     E     C             1.00 
 SSP    55     T     E     C             1.00 
 SSP    56     L     E     E             1.00 
 SSP    57     I     E     E             1.00 
 SSP    58     C     C     E             1.00 
 SSP    59     A     C     C             1.00 
 SSP    60     D     H     C             1.00 
 SSP    61     D     H     C             1.00 
 SSP    62     L     H     C             1.00 
 SSP    63     Q     H     C             1.00 
 SSP    64     T     H     H             1.00 
 SSP    65     N     H     H             1.00 
 SSP    66     L     E     H             1.00 
 SSP    67     N     E     H             1.00 
 SSP    68     L     E     H             1.00 
 SSP    69     Q     E     H             1.00 
 SSP    70     T     E     H             1.00 
 SSP    71     K     C     C             1.00 
 SSP  BREAK 
 SSP    84     Q     E     C             1.00 
 SSP    85     Q     E     E             1.00 
 SSP    86     V     E     E             1.00 
 SSP    87     I     E     E             1.00 
 SSP    88     N     E     E             1.00 
 SSP    89     I     E     E             1.00 
 SSP    90     E     E     C             1.00 
 SSP    91     C     E     C             1.00 
 SSP    92     I     C     C             1.00 
 SSP    93     S     C     C             1.00 
 SSP    94     D     C     C             1.00 
 SSP    95     F     C     C             1.00 
 SSP    96     T     C     C             1.00 
 SSP    97     E     C     C             1.00 
 SSP    98     A     C     C             1.00 
 SSP    99     P     C     C             1.00 
 SSP   100     V     E     C             1.00 
 SSP   101     L     E     E             1.00 
 SSP   102     N     E     E             1.00 
 SSP   103     I     E     E             1.00 
 SSP   104     Q     E     E             1.00 
 SSP   105     F     E     E             1.00 
 SSP   106     R     E     C             1.00 
 SSP   107     Y     E     C             1.00 
 SSP   108     G     C     C             1.00 
 SSP   109     G     C     C             1.00 
 SSP   110     T     E     C             1.00 
 SSP   111     F     E     C             1.00 
 SSP   112     Q     E     C             1.00 
 SSP   113     N     E     C             1.00 
 SSP   114     V     E     C             1.00 
 SSP   115     S     E     C             1.00 
 SSP   116     V     E     E             1.00 
 SSP   117     K     E     E             1.00 
 SSP   118     L     C     E             1.00 
 SSP   119     P     C     C             1.00 
 SSP   120     I     C     C             1.00 
 SSP   121     T     C     C             1.00 
 SSP   122     L     H     C             1.00 
 SSP  BREAK 
 SSP   130     E     C     C             1.00 
 SSP   131     M     C     H             1.00 
 SSP   132     A     C     H             1.00 
 SSP   133     S     H     H             1.00 
 SSP   134     Q     H     H             1.00 
 SSP   135     D     H     H             1.00 
 SSP   136     F     H     H             1.00 
 SSP   137     F     H     H             1.00 
 SSP   138     Q     H     H             1.00 
 SSP   139     R     H     H             1.00 
 SSP   140     W     H     H             1.00 
 SSP   141     K     C     C             1.00 
 SSP   142     Q     C     C             1.00 
 SSP   143     L     C     C             1.00 
 SSP   144     S     C     C             1.00 
 SSP   145     N     C     C             1.00 
 SSP   146     P     H     C             1.00 
 SSP   147     Q     H     H             1.00 
 SSP   148     Q     H     H             1.00 
 SSP   149     E     E     H             1.00 
 SSP   150     V     E     H             1.00 
 SSP   151     Q     E     H             1.00 
 SSP   152     N     E     H             1.00 
 SSP   153     I     E     H             1.00 
 SSP   154     F     E     H             1.00 
 SSP   155     K     E     C             1.00 
 SSP   156     A     C     C             1.00 
 SSP   157     K     C     C             1.00 
 SSP   158     H     C     C             1.00 
 SSP   159     P     C     C             1.00 
 SSP   160     M     C     H             1.00 
 SSP   161     D     C     H             1.00 
 SSP   162     T     H     H             1.00 
 SSP   163     E     H     H             1.00 
 SSP   164     I     H     H             1.00 
 SSP   165     T     H     H             1.00 
 SSP   166     K     H     H             1.00 
 SSP   167     A     H     H             1.00 
 SSP   168     K     H     H             1.00 
 SSP   169     I     H     C             1.00 
 SSP   170     I     H     C             1.00 
 SSP   171     G     H     C             1.00 
 SSP   172     F     H     C             1.00 
 SSP   173     G     C     C             1.00 
 SSP   174     S     C     C             1.00 
 SSP   175     A     E     C             1.00 
 SSP   176     L     E     C             1.00 
 SSP   177     L     E     C             1.00 
 SSP   178     E     C     C             1.00 
 SSP   179     E     C     C             1.00 
 SSP   180     V     C     C             1.00 
 SSP   181     D     C     C             1.00 
 SSP   182     P     C     C             1.00 
 SSP   183     N     C     E             1.00 
 SSP   184     P     C     C             1.00 
 SSP   185     A     C     C             1.00 
 SSP   186     N     C     C             1.00 
 SSP   187     F     E     C             1.00 
 SSP   188     V     E     C             1.00 
 SSP   189     G     E     C             1.00 
 SSP   190     A     E     C             1.00 
 SSP   191     G     E     E             1.00 
 SSP   192     I     E     C             1.00 
 SSP   193     I     E     C             1.00 
 SSP   194     H     E     E             1.00 
 SSP   195     T     C     C             1.00 
 SSP   196     K     C     C             1.00 
 SSP   197     T     C     C             1.00 
 SSP   198     T     C     C             1.00 
 SSP   199     Q     E     C             1.00 
 SSP   200     I     E     C             1.00 
 SSP   201     G     E     C             1.00 
 SSP   202     C     E     C             1.00 
 SSP   203     L     E     E             1.00 
 SSP   204     L     E     C             1.00 
 SSP   205     R     E     C             1.00 
 SSP   206     L     E     C             1.00 
 SSP   207     E     E     C             1.00 
 SSP   208     P     E     C             1.00 
 SSP   209     N     E     C             1.00 
 SSP   210     L     C     H             1.00 
 SSP   211     Q     C     H             1.00 
 SSP   212     A     C     H             1.00 
 SSP   213     Q     C     H             1.00 
 SSP   214     M     E     H             1.00 
 SSP   215     Y     E     H             1.00 
 SSP   216     R     E     H             1.00 
 SSP   217     L     E     H             1.00 
 SSP   218     T     E     H             1.00 
 SSP   219     L     E     H             1.00 
 SSP   220     R     E     C             1.00 
 SSP   221     T     E     C             1.00 
 SSP   222     S     C     C             1.00 
 SSP   223     K     C     C             1.00 
 SSP   224     D     H     C             1.00 
 SSP   225     T     H     C             1.00 
 SSP   226     V     H     H             1.00 
 SSP   227     S     H     H             1.00 
 SSP   228     Q     H     H             1.00 
 SSP   229     R     H     H             1.00 
 SSP   230     L     H     H             1.00 
 SSP   231     C     H     H             1.00 
 SSP   232     E     H     H             1.00 
 SSP   233     L     H     H             1.00 
 SSP   234     L     H     H             1.00 
 SSP   235     S     H     H             1.00 
 SSP   236     E     C     H             1.00 
 SSP   237     Q     C     C             1.00 
 SSP   238     F     C     C             1.00 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              47.5      68.9     18.7     72.1     86.1 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        45.9      76.4     22.4     57.8     86.1 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG           20              48.3              26.7 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00     204    100.0     47.5 
 
 BIN  0.00 - 1.00      1.00     204    100.0     47.5 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
 
 CONSIDERED - explicitly provided contacts (with positive confidence) or 
              non contacts (with negative confidence) possible to evaluate 
 SEP      - Minimum separation between residues considered 
 NPC      - Number of contacts predicted correctly 
 PC(P)    - Percent of contacts predicted correctly from CONSIDERED in PREDICTION 
 PC(T)    - Percent of contacts predicted correctly from CONSIDERED in TARGET with SEP limit 
 PC(TT)   - Percent of contacts predicted correctly from TOTAL in TARGET with SEP limit 
 
                        CONSIDERED     CONSIDERED       TOTAL          TOTAL 
                      in PREDICTION    in TARGET    in PREDICTION    in TARGET 
 ALL RESIDUES USED         204             204           205            237 
 ALL CONTACTS (< 8.0A)     988             925           994           1150 
 
               in PREDICTION      Predicted correctly          Submitted as        in TARGET 
                CONSIDERED     NPC   PC(P)   PC(T)   PC(TT)    NOT  predicted   CONSIDERED  TOTAL  |   SEP 
 RES CONTACTS       988        427   43.22   46.16   37.13       0     0.00         925      1150  |   1-9999 
 RES CONTACTS       516        395   76.55   84.95   72.48       0     0.00         465       545  |   1-4    
 RES CONTACTS        55          6   10.91   10.34    9.68       0     0.00          58        62  |   5-8    
 RES CONTACTS       417         26    6.24    6.47    4.79       0     0.00         402       543  |   9-9999 
 
 
 
# WARNING! TARGET 1874 atoms, MODEL 3550 atoms, 1874 common with TARGET 
           Number of atoms possible to evaluate: 1613 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    81.00           44.0   400    84.7   472     ARMSMC  
     SECONDARY STRUCTURE . .    80.22           47.0   253    89.1   284     ARMSMC  
     SURFACE . . . . . . . .    82.35           42.5   228    85.4   267     ARMSMC  
     BURIED  . . . . . . . .    79.19           45.9   172    83.9   205     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    92.92           32.4   182    86.3   211     ARMSSC1 
     RELIABLE SIDE CHAINS  .    93.40           32.0   172    86.9   198     ARMSSC1 
     SECONDARY STRUCTURE . .    92.36           32.2   118    90.1   131     ARMSSC1 
     SURFACE . . . . . . . .    89.25           35.3   102    87.9   116     ARMSSC1 
     BURIED  . . . . . . . .    97.40           28.8    80    84.2    95     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    78.80           46.4   140    87.0   161     ARMSSC2 
     RELIABLE SIDE CHAINS  .    73.19           51.5    99    85.3   116     ARMSSC2 
     SECONDARY STRUCTURE . .    80.97           47.3    91    88.3   103     ARMSSC2 
     SURFACE . . . . . . . .    80.13           40.0    80    87.9    91     ARMSSC2 
     BURIED  . . . . . . . .    76.99           55.0    60    85.7    70     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    94.97           30.8    52    91.2    57     ARMSSC3 
     RELIABLE SIDE CHAINS  .    86.70           30.3    33    94.3    35     ARMSSC3 
     SECONDARY STRUCTURE . .    83.69           33.3    33    94.3    35     ARMSSC3 
     SURFACE . . . . . . . .    92.48           34.1    44    91.7    48     ARMSSC3 
     BURIED  . . . . . . . .   107.68           12.5     8    88.9     9     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    93.01           27.8    18    90.0    20     ARMSSC4 
     RELIABLE SIDE CHAINS  .    93.01           27.8    18    90.0    20     ARMSSC4 
     SECONDARY STRUCTURE . .    97.43           23.1    13   100.0    13     ARMSSC4 
     SURFACE . . . . . . . .    94.99           31.2    16    94.1    17     ARMSSC4 
     BURIED  . . . . . . . .    75.29            0.0     2    66.7     3     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1    2 - 38   37   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    12      2 - 13       4.38    19.14 
  LCS LOCAL_SCORE:             28.49 
 
 FRAGMENT  2   53 - 71   19   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    17     53 - 69       4.19     6.32 
  LCS LOCAL_SCORE:             87.53 
 
 FRAGMENT  3   84 - 122  39   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    25     96 - 120      4.98     7.50 
  LCS LOCAL_SCORE:             57.73 
 
 FRAGMENT  4  130 - 238  109  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    26    149 - 174      4.89    19.62 
  LONGEST_CONTINUOUS_SEGMENT    26    150 - 175      4.85    20.00 
  LCS LOCAL_SCORE:             19.62 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1    2 - 38   37   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7     10 - 16       1.99    21.94 
  LCS LOCAL_SCORE:             14.46 
 
 FRAGMENT  2   53 - 71   19   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     8     53 - 60       1.77    14.22 
  LONGEST_CONTINUOUS_SEGMENT     8     54 - 61       1.99     7.98 
  LCS LOCAL_SCORE:             33.24 
 
 FRAGMENT  3   84 - 122  39   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    11     84 - 94       1.95     9.51 
  LCS LOCAL_SCORE:             23.73 
 
 FRAGMENT  4  130 - 238  109  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    14    224 - 237      1.99    34.85 
  LONGEST_CONTINUOUS_SEGMENT    14    225 - 238      1.22    35.81 
  LCS LOCAL_SCORE:              7.95 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1    2 - 38   37   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5      4 - 8        0.53    17.48 
  LCS LOCAL_SCORE:              9.50 
 
 FRAGMENT  2   53 - 71   19   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7     53 - 59       0.42    14.86 
  LCS LOCAL_SCORE:             26.87 
 
 FRAGMENT  3   84 - 122  39   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7     84 - 90       0.88    17.83 
  LONGEST_CONTINUOUS_SEGMENT     7     97 - 103      0.98    10.23 
  LCS LOCAL_SCORE:             15.25 
 
 FRAGMENT  4  130 - 238  109  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    13    225 - 237      0.94    35.38 
  LCS LOCAL_SCORE:              5.83 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS       2       E     0    3   12       C        0   0   1   1   1   3   3   4   4   4   4   4   4   4   5   5   5   5   6   7  
 LCS       3       D     3    6   12       C        1   1   1   1   2   3   3   4   4   4   4   4   4   5   5   5   6   6   7   7  
 LCS       4       N     5    6   12       C        1   2   2   2   2   3   3   4   4   4   4   4   4   4   5   6   7  11  13  13  
 LCS       5       F     5    6   12       H        1   2   2   2   2   3   3   4   4   4   4   4   4   4   5   7   7   8   8  10  
 LCS       6       A     5    6   12       H        1   2   2   2   2   3   3   4   4   4   4   4   5   5   6   9   9  11  12  12  
 LCS       7       R     5    6   12       H        1   2   2   2   2   3   3   4   4   4   5   5   5   5   8   9   9  11  15  16  
 LCS       8       F     5    6   12       H        1   2   2   2   2   3   3   4   4   4   5   5   5   6   7   8   8  14  15  16  
 LCS       9       V     3    6   12       C        1   1   1   2   2   3   3   4   5   5   6   8   8  10  11  12  13  14  15  16  
 LCS      10       C     4    7   12       C        1   1   1   2   2   3   3   4   5   5   6   8   9  10  11  12  13  14  15  16  
 LCS      11       K     4    7   12       C        1   1   1   2   2   2   3   4   4   5   6   8   9  10  11  12  13  14  15  16  
 LCS      12       N     4    7   12       C        1   1   1   2   2   2   3   3   4   5   6   8   9  10  11  12  13  14  15  16  
 LCS      13       N     4    7   12       C        1   1   1   2   2   2   3   3   3   4   4   4   9  10  11  12  13  14  15  16  
 LCS      14       G     3    7   10       E        1   1   1   2   2   2   3   3   3   4   4   5   5   5   5   7   9   9  10  11  
 LCS      15       V     4    7   10       E        1   1   1   2   2   2   3   3   3   4   4   4   5   5   5   6   9   9  10  11  
 LCS      16       L     4    7   10       E        1   1   1   2   2   2   3   3   3   4   4   4   4   5   5   5   5   6   8  10  
 LCS      17       F     4    6   10       E        1   1   1   2   2   2   2   3   3   3   5   5   5   6   7   8   8   8   9  10  
 LCS      18       E     4    6   10       E        1   1   1   2   2   2   2   2   3   4   5   5   5   6   7   8   8   8   9  10  
 LCS      19       N     4    6   10       C        1   1   1   2   2   2   2   2   3   4   5   5   5   6   7   8   8   8   9  10  
 LCS      20       Q     4    6   10       C        1   1   1   2   2   2   2   2   3   3   3   3   3   4   5   7   7   7   8   9  
 LCS      21       L     4    6   10       C        1   1   1   1   2   2   2   2   3   3   3   3   3   4   5   7   7   7   8   9  
 LCS      22       L     4    5   10       E        1   1   1   1   1   2   2   2   3   4   5   5   5   6   7   7   8   8   9  10  
 LCS      23       Q     3    5   10       E        1   1   1   1   1   2   2   2   2   4   5   5   5   6   7   7   8   8   9  10  
 LCS      24       I     3    5    9       E        0   1   1   1   1   2   2   3   3   4   5   5   5   6   7   8   8   8   9  10  
 LCS      25       G     3    5   10       E        0   1   1   1   1   2   2   3   4   4   5   5   5   6   7   8   8   8   9  10  
 LCS      26       L     3    5   10       E        1   1   1   1   1   2   2   3   4   4   5   5  13  14  17  18  21  24  26  27  
 LCS      27       K     3    5   10       E        1   1   1   1   2   2   4   5   7  10  11  13  14  16  18  19  21  24  26  27  
 LCS      28       S     3    3   10       E        1   1   1   1   1   2   2   3   3   4   5   9  14  15  17  19  21  24  26  27  
 LCS      29       E     3    3   10       E        0   1   1   1   1   1   2   2   3   4   5   5   5   6   8  15  21  23  26  27  
 LCS      30       F     3    4   10       E        0   1   1   1   1   2   2   2   3   4   5   5   6   7   8   8   8   9   9  22  
 LCS      31       R     3    5   10       E        1   1   1   1   2   2   2   4   5   5   5   5   6   7   8   8   8   9   9  10  
 LCS      32       Q     3    5   10       C        1   1   1   1   2   2   2   2   3   3   5   5   6   7   8   8   8   8   9  10  
 LCS      33       N     3    5   10       C        1   1   1   1   2   2   2   2   3   4   5   5   6   7   8   8   8   9   9  10  
 LCS      34       L     3    5   10       E        1   1   1   1   2   2   2   3   3   4   5   5   5   6   7   8   8   9   9  10  
 LCS      35       G     3    5   10       E        0   1   1   1   2   2   2   3   3   4   5   5   5   7   8   8   8   9   9  10  
 LCS      36       R     3    3    9       E        0   1   1   1   2   2   2   2   4   4   5   6   7   7   7   8   8   9   9  10  
 LCS      37       M     3    3    9       E        0   1   1   1   2   2   2   2   5   5   5   6   7   7   7   7   8   9  12  13  
 LCS      38       F     3    3    9       E        0   1   1   1   2   2   3   4   5   5   5   6   7   7   7   7   8   9  12  13  
 LCS      39       I     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      40       F     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      41       Y     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      42       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      43       N     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      44       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      45       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      46       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      47       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      48       Q     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      49       F     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      50       L     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      51       N     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      52       F     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      53       T     7    8   17       E        2   2   2   3   3   3   4   4   5   5   6   6   6   6   7   7   7   9   9  10  
 LCS      54       P     7    8   17       E        2   2   2   3   3   3   4   4   5   5   6   6   6   6   7   7   8   9   9  10  
 LCS      55       T     7    8   17       E        2   2   2   3   3   3   4   4   5   5   6   6   6   6   7   7   8   9   9  10  
 LCS      56       L     7    8   17       E        2   2   2   3   3   3   4   4   5   5   6   6   6   6   7   7   8   9  12  13  
 LCS      57       I     7    8   17       E        2   2   2   3   3   3   4   4   5   5   6   6   6   6   7   7   8   9   9  10  
 LCS      58       C     7    8   17       C        2   2   2   3   3   3   4   4   5   5   6   6   6   6   7   7   8   9   9  10  
 LCS      59       A     7    8   17       C        2   2   2   3   3   3   4   4   5   5   6   6   6   6   7   7   8   9   9  10  
 LCS      60       D     4    8   17       H        0   1   1   2   2   3   4   4   5   5   6   6   6   6   7   7   8   9  12  13  
 LCS      61       D     4    8   17       H        0   1   1   2   2   3   4   4   5   5   6   6   6   6   7   7   7   7  12  13  
 LCS      62       L     3    6   17       H        1   1   1   1   1   2   2   4   5   5   6   6   6  12  15  17  21  23  24  25  
 LCS      63       Q     5    6   17       H        1   1   2   2   2   2   2   2   3   5   6   6  10  13  15  18  21  23  26  27  
 LCS      64       T     5    6   17       H        1   1   2   2   2   3   4   4   5   5   6   6   6   6   7   7   7   7   7   7  
 LCS      65       N     5    6   17       H        1   1   2   2   2   3   4   4   5   5   6   6   6   6   7   7   7   7   7   7  
 LCS      66       L     5    6   17       E        1   1   2   2   2   2   4   4   5   5   6   6   6   6   7   7   7   7   7  10  
 LCS      67       N     5    6   17       E        1   1   2   2   2   2   2   3   5   5   6   6   6  13  15  18  21  23  26  27  
 LCS      68       L     3    3   17       E        1   1   1   1   1   2   2   4   5   5   6   6   6  13  15  18  21  23  26  27  
 LCS      69       Q     3    3   17       E        0   1   1   1   1   1   2   2   3   6   7   9  10  13  16  19  21  23  26  27  
 LCS      70       T     3    3   14       E        1   1   1   1   1   1   3   3   5   7   8  11  14  15  17  19  21  24  26  27  
 LCS      71       K     3    3   13       C        1   1   1   1   1   1   2   2   3   3  10  11  14  15  17  19  21  24  26  27  
 LCS      72       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      73       V     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      74       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      75       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      76       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      77       V     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      78       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      79       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      80       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      81       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      82       Q     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      83       V     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      84       Q     7   11   18       E        1   2   2   2   3   4   5   5   7  10  11  13  14  16  18  19  21  24  26  27  
 LCS      85       Q     7   11   18       E        1   2   2   3   3   4   5   5   7  10  11  13  14  16  18  19  21  24  26  27  
 LCS      86       V     7   11   18       E        1   2   2   3   3   4   5   5   7  10  11  13  14  16  18  19  21  24  26  27  
 LCS      87       I     7   11   18       E        1   2   2   3   3   4   5   5   5   9  11  13  14  16  18  19  21  24  26  27  
 LCS      88       N     7   11   18       E        1   2   2   3   3   4   5   5   5   7   9  12  14  16  18  19  21  24  26  27  
 LCS      89       I     7   11   18       E        1   2   2   3   3   4   5   5   5   7   9  12  14  16  18  19  21  24  26  27  
 LCS      90       E     7   11   18       E        1   2   2   3   3   4   5   5   6   7   9   9  10  15  17  19  21  24  25  27  
 LCS      91       C     6   11   18       E        1   2   2   3   6   6   6   6   6   7  10  13  14  16  18  19  21  24  25  27  
 LCS      92       I     6   11   18       C        1   2   2   3   5   6   6   6   6   7   7   8  10  11  12  13  15  21  24  26  
 LCS      93       S     4   11   18       C        1   1   2   3   3   4   5   5   5   7   9   9  10  11  12  13  20  22  24  27  
 LCS      94       D     4   11   18       C        1   1   1   2   3   4   5   6   7   8   9  10  10  11  12  13  15  15  15  24  
 LCS      95       F     5    9   19       C        1   1   2   2   3   3   5   6   7   8   9  10  10  11  12  13  15  15  15  15  
 LCS      96       T     5    9   25       C        1   1   2   2   3   4   5   6   7   8   9  10  10  11  12  13  15  15  15  15  
 LCS      97       E     7    9   25       C        1   2   2   3   3   3   5   6   7   8   9  10  10  11  15  19  21  24  26  27  
 LCS      98       A     7    9   25       C        1   2   2   3   3   3   5   6   7   8   9  10  12  14  18  19  21  24  26  27  
 LCS      99       P     7    9   25       C        1   2   2   3   3   3   6   6   7  10  11  13  14  16  18  19  21  24  26  27  
 LCS     100       V     7    9   25       E        1   2   2   3   3   3   4   6   7  10  11  13  14  16  18  19  21  24  26  27  
 LCS     101       L     7    9   25       E        1   2   2   3   3   3   5   6   7   9  11  13  14  16  18  19  21  24  26  27  
 LCS     102       N     7    9   25       E        1   2   2   3   3   3   5   6   7   8  10  12  14  16  18  19  21  24  26  27  
 LCS     103       I     7    9   25       E        1   2   2   3   3   3   5   6   7   8  10  12  14  15  18  19  21  24  26  27  
 LCS     104       Q     6    9   25       E        1   2   2   3   3   3   5   6   7   8  10  11  13  15  17  19  21  24  26  27  
 LCS     105       F     6    9   25       E        1   2   2   2   3   3   5   6   7   8  10  11  14  15  17  19  21  24  26  27  
 LCS     106       R     5    8   25       E        1   1   2   2   3   3   4   5   7   8   9  10  10  11  12  13  15  21  22  26  
 LCS     107       Y     5    8   25       E        1   1   2   2   3   3   4   5   7   8   9  10  10  11  12  13  15  15  15  25  
 LCS     108       G     5    8   25       C        1   1   2   2   3   3   4   5   5   7   7   8   8   9  10  11  12  15  15  15  
 LCS     109       G     5    8   25       C        1   1   2   2   2   3   4   5   5   6   7   8   8   9  10  11  11  11  13  15  
 LCS     110       T     5    8   25       E        1   1   2   2   2   3   4   5   5   6   7   8   8  10  10  11  11  12  13  15  
 LCS     111       F     5    8   25       E        1   1   2   2   2   3   4   5   6   7   8  10  13  14  16  18  21  24  25  27  
 LCS     112       Q     5    6   25       E        1   1   2   2   2   2   3   5   5   7   8  11  13  14  17  18  21  24  26  27  
 LCS     113       N     5    6   25       E        0   1   2   2   2   3   4   5   7  10  11  13  14  16  18  19  21  24  26  27  
 LCS     114       V     5    9   25       E        1   1   2   3   3   3   5   6   7  10  11  13  14  16  18  19  21  24  26  27  
 LCS     115       S     5    9   25       E        1   1   2   3   3   3   5   6   7   9  11  13  14  16  18  19  21  24  26  27  
 LCS     116       V     6    9   25       E        1   1   2   3   3   3   4   6   7  10  11  13  14  16  18  19  21  24  26  27  
 LCS     117       K     6    9   25       E        1   2   2   3   3   3   5   6   7  10  11  13  14  16  18  19  21  24  26  27  
 LCS     118       L     6    9   25       C        1   2   2   3   3   3   5   6   7  10  11  13  14  16  18  19  21  24  26  27  
 LCS     119       P     6    9   25       C        1   2   2   3   3   3   5   6   7   8   9  10  10  11  15  19  21  24  26  27  
 LCS     120       I     6    9   25       C        1   2   2   3   3   3   4   5   7   8  10  13  14  16  18  19  21  24  26  27  
 LCS     121       T     6    9   24       C        1   2   2   3   3   3   3   5   7  10  11  13  14  16  18  19  21  24  26  27  
 LCS     122       L     6    9   12       H        0   1   2   3   3   3   3   4   7  10  11  13  14  16  18  19  21  24  26  27  
 LCS     123       N     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     124       K     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     125       F     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     126       F     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     127       Q     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     128       P     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     129       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     130       E     0    3   16       C        0   0   1   1   3   3   4   5   5   7   8   8   8   9  10  10  10  11  12  13  
 LCS     131       M     3   11   16       C        0   1   1   1   2   3   4   4   5   5   8   8   8   9  10  10  10  11  12  13  
 LCS     132       A    10   12   16       C        3   3   4   4   4   5   5   5   6   7   7   8   9  11  12  13  13  14  14  14  
 LCS     133       S    10   12   16       H        3   3   4   4   4   5   5   6   6   7   8   8  10  11  12  13  13  14  14  16  
 LCS     134       Q    10   12   16       H        3   3   4   4   4   5   5   6   6   7   8   8  10  11  12  13  13  15  18  20  
 LCS     135       D    10   12   17       H        3   3   4   4   4   5   5   6   6   7   8   8  10  11  12  13  13  14  16  20  
 LCS     136       F    10   12   18       H        3   3   4   4   4   5   5   6   6   7   8   8  10  11  12  15  17  20  21  22  
 LCS     137       F    10   12   18       H        3   3   4   4   4   5   5   6   6   7   8   9  11  14  16  18  21  21  23  25  
 LCS     138       Q    10   12   18       H        3   3   4   4   4   5   5   6   6   7   8   9  10  13  15  18  21  21  22  23  
 LCS     139       R    10   12   18       H        3   3   4   4   4   5   5   6   6   7   7   8  10  12  14  18  21  21  22  23  
 LCS     140       W    10   12   18       H        3   3   4   4   4   5   5   7   7   8  10  12  15  17  18  20  22  24  24  27  
 LCS     141       K    10   12   18       C        1   2   4   4   4   5   5   7   7   8  10  13  15  17  18  20  22  24  24  25  
 LCS     142       Q     4   12   18       C        1   1   2   4   4   5   5   7   7   8  10  12  15  16  18  20  22  24  24  25  
 LCS     143       L     4   12   18       C        1   1   2   3   4   5   5   7   7   8  10  13  15  17  18  20  22  24  25  27  
 LCS     144       S     4    5   18       C        1   1   1   1   2   3   3   4   5   6   8   9  12  16  18  19  22  24  25  27  
 LCS     145       N     4    6   18       C        1   1   1   1   2   3   5   7   7   8  10  13  15  17  18  20  22  24  26  27  
 LCS     146       P     5    6   18       H        1   1   2   2   2   3   5   7   8   9  10  13  15  17  18  20  22  24  26  27  
 LCS     147       Q     5    6   18       H        1   1   2   2   2   2   2   3   5   6   8  10  13  16  18  20  22  24  26  27  
 LCS     148       Q     5    6   18       H        1   1   2   2   2   2   2   4   5   7   8  10  12  13  17  19  22  24  26  27  
 LCS     149       E     5    6   26       E        1   1   2   2   2   3   4   5   6   9  10  13  15  17  18  20  22  24  26  27  
 LCS     150       V     5    6   26       E        1   1   2   2   3   4   5   8   9  10  11  13  15  17  18  20  22  24  26  27  
 LCS     151       Q     3    3   26       E        0   1   1   2   3   4   5   8   9  10  11  13  15  17  18  20  22  24  24  25  
 LCS     152       N     3    7   26       E        1   1   2   2   3   5   6   8   9  10  11  13  15  17  18  20  22  24  24  25  
 LCS     153       I     3    7   26       E        1   1   1   2   2   3   5   7   8   9  11  13  13  16  18  20  22  24  24  25  
 LCS     154       F     3    8   26       E        1   1   1   2   4   5   5   7   8   9  10  12  13  15  18  20  22  24  24  25  
 LCS     155       K     3    8   26       E        1   1   1   2   4   5   5   7   8   9  10  13  13  15  18  20  22  24  24  25  
 LCS     156       A     3    8   26       C        1   1   1   2   4   5   6   7   9  10  11  13  15  17  18  20  22  24  24  25  
 LCS     157       K     3    8   26       C        1   1   1   2   2   5   6   8   9  10  11  13  15  17  18  20  22  24  24  25  
 LCS     158       H     4    8   26       C        1   2   2   2   4   5   6   8   9  10  11  13  15  17  18  20  22  24  24  25  
 LCS     159       P     4    8   26       C        1   2   2   2   4   5   6   8   9  10  11  13  15  17  18  20  22  24  24  25  
 LCS     160       M     4    8   26       C        1   2   2   2   4   5   6   8   9  10  11  13  15  17  18  20  22  24  24  27  
 LCS     161       D    10   10   26       C        3   3   3   4   4   5   6   8   9  10  11  13  15  17  18  20  22  24  26  27  
 LCS     162       T    10   10   26       H        3   3   3   4   4   5   5   7   7   8  11  13  15  17  18  20  22  24  26  27  
 LCS     163       E    10   10   26       H        3   3   3   4   4   4   4   6   7  10  11  13  15  17  18  20  22  24  26  27  
 LCS     164       I    10   10   26       H        3   3   3   4   4   4   6   7   9  10  11  13  15  17  18  20  22  24  26  27  
 LCS     165       T    10   10   26       H        3   3   3   4   4   4   5   8   9  10  11  13  15  17  18  20  22  24  26  27  
 LCS     166       K    10   10   26       H        3   3   3   4   4   4   5   8   9  10  11  13  15  17  18  20  22  24  26  27  
 LCS     167       A    10   10   26       H        3   3   3   4   4   4   4   7   9  10  11  13  15  17  18  20  22  24  26  27  
 LCS     168       K    10   10   26       H        3   3   3   4   4   4   4   6   7   8  10  13  15  17  18  20  22  24  24  27  
 LCS     169       I    10   10   26       H        3   3   3   4   4   4   5   7   8   9  11  13  15  17  18  20  22  24  24  25  
 LCS     170       I    10   10   26       H        1   1   1   4   4   4   5   8   9  10  11  13  15  17  18  20  22  24  24  25  
 LCS     171       G     3    7   26       H        1   1   1   2   2   3   5   6   8  10  10  13  15  17  18  20  22  24  24  25  
 LCS     172       F     4    7   26       H        1   1   1   2   2   2   4   6   8   9  10  11  13  15  17  19  21  22  24  25  
 LCS     173       G     4    7   26       C        1   1   1   2   2   3   5   7   8  10  11  13  15  17  18  20  22  24  24  25  
 LCS     174       S     4    7   26       C        1   1   1   2   2   2   3   6   8   9  11  13  15  17  18  20  22  24  24  25  
 LCS     175       A     4    7   26       E        1   1   1   2   2   3   4   6   7   7  10  12  15  17  18  20  22  24  26  27  
 LCS     176       L     3    6   24       E        1   1   1   2   2   3   4   6   7  10  11  13  14  16  18  19  21  24  26  27  
 LCS     177       L     3    6   24       E        1   1   1   2   2   4   6   6   7  10  11  13  14  16  18  19  21  24  26  27  
 LCS     178       E     3    4   24       C        1   1   1   2   2   2   3   5   7  10  11  13  14  16  18  19  21  24  26  27  
 LCS     179       E     3    4   24       C        1   1   1   1   1   1   2   4   5   6   8  10  11  16  18  19  21  24  26  27  
 LCS     180       V     4    5   24       C        1   1   1   2   2   3   4   4   5   7  10  13  14  16  18  19  21  24  26  27  
 LCS     181       D     4    9   24       C        1   1   1   2   2   3   4   4   4   5   7   8   9   9  10  11  16  20  23  26  
 LCS     182       P     4    9   19       C        1   1   2   2   2   3   4   4   4   5   7   7   8   9   9  10  11  13  15  16  
 LCS     183       N     4    9   15       C        1   1   2   2   2   3   4   4   4   6   7   8  10  11  12  13  13  14  14  15  
 LCS     184       P     3    9   15       C        1   1   1   2   2   3   4   4   4   5   5   5  10  11  12  13  13  14  14  14  
 LCS     185       A     5    9   15       C        1   2   2   2   3   4   5   6   6   7   7   8  10  11  12  13  13  14  14  14  
 LCS     186       N     5    9   15       C        1   2   2   2   4   5   5   6   6   7   7   8  10  11  12  13  13  14  14  14  
 LCS     187       F     5    9   22       E        1   2   2   2   2   3   5   6   6   7   7   8   9  11  12  13  13  14  16  19  
 LCS     188       V     5    9   23       E        1   2   2   2   4   5   5   6   6   7   7   9  11  13  16  19  21  24  26  27  
 LCS     189       G     5    9   23       E        1   2   2   3   4   5   6   6   7  10  11  13  15  17  18  20  22  24  26  27  
 LCS     190       A     3    7   23       E        1   1   1   2   3   4   6   6   7  10  11  13  15  17  18  20  22  24  26  27  
 LCS     191       G     3    6   23       E        1   1   1   1   2   4   6   6   7   8  10  12  15  17  18  20  22  24  25  27  
 LCS     192       I     5    6   23       E        1   1   1   2   2   3   6   6   7   7   9  10  13  14  16  18  22  24  25  27  
 LCS     193       I     5    6   23       E        1   1   1   2   2   3   3   4   7   7   8  10  13  15  16  18  22  24  24  25  
 LCS     194       H     5    6   23       E        1   2   2   2   2   3   6   6   7   7   8  10  12  15  16  18  20  23  24  25  
 LCS     195       T     5    6   23       C        1   1   1   2   2   3   6   6   7   7   8  10  12  15  16  18  21  24  24  25  
 LCS     196       K     5    6   23       C        1   1   1   2   2   3   3   4   7   7   8   9  11  14  15  18  20  22  23  25  
 LCS     197       T     4    9   23       C        1   1   1   1   3   4   6   6   7   7   8  11  14  16  17  19  22  24  24  25  
 LCS     198       T     4    9   23       C        1   2   2   3   3   4   6   6   8  10  10  13  15  17  18  20  22  24  24  25  
 LCS     199       Q     5    9   23       E        1   1   2   2   4   5   6   8   9  10  10  13  15  17  18  20  22  24  24  25  
 LCS     200       I     6    9   23       E        1   2   2   3   4   5   6   8   9  10  11  13  15  17  18  20  22  24  24  25  
 LCS     201       G     6    9   23       E        1   2   2   3   3   5   6   8   9  10  10  13  15  17  18  20  22  24  24  25  
 LCS     202       C     6    9   23       E        1   2   2   3   4   5   6   8   9  10  11  13  15  17  18  20  22  24  24  25  
 LCS     203       L     6    9   23       E        1   2   2   3   4   5   6   8   9  10  11  13  15  17  18  20  22  24  26  27  
 LCS     204       L     6    9   23       E        1   2   2   3   4   5   6   8   9  10  11  13  15  17  18  20  22  24  26  27  
 LCS     205       R     6    9   23       E        1   2   2   3   4   5   6   8   9  10  11  13  15  17  18  20  22  24  26  27  
 LCS     206       L     5    9   23       E        1   1   2   2   4   5   6   8   9  10  11  13  15  17  18  20  22  24  26  27  
 LCS     207       E     3    6   23       E        1   1   1   2   3   5   5   6   7   8   9  11  13  15  18  19  21  24  26  27  
 LCS     208       P     3    6   23       E        1   1   1   2   4   5   5   6   6   8   9  10  12  16  18  19  21  24  26  27  
 LCS     209       N     5    6   23       E        2   2   2   2   4   5   5   6   6   7   8  10  12  14  16  18  20  23  24  26  
 LCS     210       L     5    6   23       C        2   2   2   2   2   2   3   6   6   7   8  10  10  12  14  16  17  20  21  24  
 LCS     211       Q     5    6   19       C        2   2   2   2   2   2   2   3   3   4   4   5   6   8   9   9  11  11  13  16  
 LCS     212       A     5    6   19       C        2   2   2   2   2   2   4   5   6   7   8   8   9  10  13  16  18  20  23  24  
 LCS     213       Q     5    6   19       C        2   2   2   2   4   5   5   6   7   8  10  13  13  15  18  19  21  24  24  25  
 LCS     214       M     3    4   19       E        1   1   1   2   4   5   6   7   9  10  11  13  15  17  18  20  22  24  24  25  
 LCS     215       Y     3    4   19       E        0   1   2   2   3   4   5   8   9  10  11  13  15  17  18  20  22  24  24  25  
 LCS     216       R     3    3   16       E        0   1   1   1   2   2   2   4   4   7   8  12  15  17  18  20  22  24  24  25  
 LCS     217       L     3    3   16       E        0   1   1   1   2   2   2   3   3   5   6   7   8   8  10  13  15  18  20  24  
 LCS     218       T     3    3   17       E        0   1   1   1   1   2   3   4   5   7   8   8   8   9  10  10  10  11  13  16  
 LCS     219       L     5    6   19       E        1   1   2   2   3   3   4   5   5   7   8   8   8   9  10  10  13  14  15  16  
 LCS     220       R     5    6   19       E        1   1   2   2   3   3   4   5   5   7   8   8   8  10  11  12  13  14  15  16  
 LCS     221       T     5    6   19       E        1   1   2   2   3   3   4   5   5   7   8   8   8  10  11  12  13  14  15  16  
 LCS     222       S     5    6   19       C        1   1   2   2   3   3   4   5   5   7   8   8   8  10  11  12  13  14  15  16  
 LCS     223       K     5    6   19       C        1   1   2   2   3   3   4   5   5   7   8   8   9  10  11  12  13  14  15  16  
 LCS     224       D     5   14   19       H        1   1   2   2   3   3   5   5   6   7   8   8   9  10  11  12  13  14  15  16  
 LCS     225       T    13   14   19       H        2   4   5   5   6   6   6   6   6   7   7   8   9  10  11  12  13  14  15  16  
 LCS     226       V    13   14   19       H        2   4   5   5   6   6   6   6   6   7   7   8   9  10  11  12  13  14  15  16  
 LCS     227       S    13   14   19       H        2   4   5   5   6   6   6   6   6   7   8   8   9  10  11  12  13  14  15  16  
 LCS     228       Q    13   14   19       H        2   4   5   5   6   6   6   6   6   7   8   8   9  10  11  12  13  14  15  16  
 LCS     229       R    13   14   19       H        2   4   5   5   6   6   6   6   6   7   8   8   9  10  11  12  13  14  15  16  
 LCS     230       L    13   14   19       H        2   4   5   5   6   6   6   6   6   7   8   8   9  10  11  12  13  14  15  16  
 LCS     231       C    13   14   19       H        2   4   5   5   6   6   6   6   6   7   7   8   9  10  11  12  13  14  15  16  
 LCS     232       E    13   14   19       H        2   4   5   5   6   6   6   6   6   7   7   8   9  10  11  12  13  14  15  16  
 LCS     233       L    13   14   19       H        2   4   5   5   6   6   6   6   6   7   8   8   9  10  11  12  13  14  15  16  
 LCS     234       L    13   14   19       H        2   4   5   5   6   6   6   6   6   7   7   8   9  10  11  12  13  14  15  16  
 LCS     235       S    13   14   19       H        2   4   5   5   6   6   6   6   6   7   7   8   9  10  11  12  13  14  15  16  
 LCS     236       E    13   14   19       C        2   4   5   5   6   6   6   6   6   7   7   8   9  10  11  12  13  14  15  16  
 LCS     237       Q    13   14   19       C        2   4   5   5   6   6   6   6   6   7   7   8   9  10  11  12  13  14  15  16  
 LCS     238       F    11   14   19       C        1   2   2   5   6   6   6   6   6   7   7   7   8   8  10  11  12  13  15  16  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   2.05 
 
 NUMBER_OF_CA_Tg:  237      NUMBER_OF_CA_Pr:  204      PERCENT_OF_CA:  86.08  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max       8      10      13      13      15      16      16      19      23      24      28      32      36      42      45      48      53      58      63      65  
 GDT PERCENT_OF_CA_Pr    3.92    4.90    6.37    6.37    7.35    7.84    7.84    9.31   11.27   11.76   13.73   15.69   17.65   20.59   22.06   23.53   25.98   28.43   30.88   31.86 
 GDT PERCENT_OF_CA_Tg    3.38    4.22    5.49    5.49    6.33    6.75    6.75    8.02    9.70   10.13   11.81   13.50   15.19   17.72   18.99   20.25   22.36   24.47   26.58   27.43 
 GDT FRAGMENT: Beg-End 132-140 228-237 225-237 225-237  91-238  91-238  91-238 150-215 150-215 150-215  27-206 143-215 141-215 140-216 140-216 140-216 140-216  26-208  26-208  26-208 
 GDT RMS_LOCAL           0.31    0.58    0.94    0.94    1.37    1.61    1.61    3.14    3.32    3.40    4.34    4.44    4.76    5.16    5.36    5.60    6.00    6.49    6.84    6.96 
 GDT RMS_ALL_CA         35.44   31.59   31.20   31.20   31.65   31.70   31.70   32.73   32.81   32.58   17.67   33.18   32.26   32.83   32.41   33.16   32.80   17.58   17.62   17.62 
 
 
 TEST (CA)  RMS =  16.64               (Number of atoms:  204) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   16.64        204    86.1   237     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0816                            CRMSCA  
     SECONDARY STRUCTURE . .   15.87        128    90.1   142     CRMSCA  
     SURFACE . . . . . . . .   17.10        117    87.3   134     CRMSCA  
     BURIED  . . . . . . . .   16.00         87    84.5   103     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   16.69       1010    86.2  1172     CRMSMC  
     SECONDARY STRUCTURE . .   15.93        633    90.2   702     CRMSMC  
     SURFACE . . . . . . . .   17.14        579    87.5   662     CRMSMC  
     BURIED  . . . . . . . .   16.07        431    84.5   510     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   17.99        797    86.1   926     CRMSSC  
     RELIABLE SIDE CHAINS  .   18.01        653    85.7   762     CRMSSC  
     SECONDARY STRUCTURE . .   17.16        530    88.6   598     CRMSSC  
     SURFACE . . . . . . . .   18.51        453    89.3   507     CRMSSC  
     BURIED  . . . . . . . .   17.27        344    82.1   419     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   17.30       1613    86.1  1874     CRMSALL 
     SECONDARY STRUCTURE . .   16.55       1042    89.4  1166     CRMSALL 
     SURFACE . . . . . . . .   17.76        921    88.3  1043     CRMSALL 
     BURIED  . . . . . . . .   16.66        692    83.3   831     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   10.904      0.519       0.262    204    86.1   237     ERRCA  
     SECONDARY STRUCTURE . .   10.389      0.510       0.257    128    90.1   142     ERRCA  
     SURFACE . . . . . . . .   11.381      0.526       0.264    117    87.3   134     ERRCA  
     BURIED  . . . . . . . .   10.262      0.508       0.260     87    84.5   103     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   10.937      0.520       0.265   1010    86.2  1172     ERRMC  
     SECONDARY STRUCTURE . .   10.433      0.512       0.260    633    90.2   702     ERRMC  
     SURFACE . . . . . . . .   11.427      0.530       0.269    579    87.5   662     ERRMC  
     BURIED  . . . . . . . .   10.279      0.506       0.260    431    84.5   510     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   11.752      0.516       0.264    797    86.1   926     ERRSC  
     RELIABLE SIDE CHAINS  .   11.641      0.505       0.259    653    85.7   762     ERRSC  
     SECONDARY STRUCTURE . .   11.182      0.505       0.261    530    88.6   598     ERRSC  
     SURFACE . . . . . . . .   12.363      0.531       0.272    453    89.3   507     ERRSC  
     BURIED  . . . . . . . .   10.948      0.496       0.252    344    82.1   419     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   11.321      0.519       0.265   1613    86.1  1874     ERRALL 
     SECONDARY STRUCTURE . .   10.819      0.510       0.261   1042    89.4  1166     ERRALL 
     SURFACE . . . . . . . .   11.846      0.531       0.270    921    88.3  1043     ERRALL 
     BURIED  . . . . . . . .   10.622      0.503       0.257    692    83.3   831     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         0         0         8        44     204     237   DISTCA 
CA  (P)      0.00      0.00      0.00      3.38     18.57             237   DISTCA 
CA  (RMS)    0.00      0.00      0.00      4.23      7.29                   DISTCA 
 
ALL (N)         0         5        16        62       371    1613    1874   DISTALL 
ALL (P)      0.00      0.27      0.85      3.31     19.80            1874   DISTALL 
ALL (RMS)    0.00      1.45      2.32      3.80      7.43                   DISTALL 
 
 
 
 
END of the results output 
