 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
# WARNING! The number of residues in SS section: 0 0 , MODEL 0 , TARGET 237 
 
# WARNING! TARGET 1874 atoms, MODEL 1275 atoms, 1258 common with TARGET 
           Number of atoms possible to evaluate: 92 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   472     ARMSMC  
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   284     ARMSMC  
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   267     ARMSMC  
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   205     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   211     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   198     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   131     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   116     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    95     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   161     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   116     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   103     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    91     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    70     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    57     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    35     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    35     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    48     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     9     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    20     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    20     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    13     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    17     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     3     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1    6 - 11   6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6      6 - 11       2.89     2.89 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   14 - 19   6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6     14 - 19       2.02     2.02 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3   21 - 30   10   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    10     21 - 30       1.53     1.53 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  4   32 - 53   22   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    13     32 - 44       4.54    11.42 
  LONGEST_CONTINUOUS_SEGMENT    13     40 - 52       4.68    16.18 
  LCS LOCAL_SCORE:             58.88 
 
 FRAGMENT  5   55 - 60   6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6     55 - 60       1.51     1.51 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  6   62 - 73   12   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    12     62 - 73       4.70     4.70 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  7   77 - 92   16   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    16     77 - 92       1.48     1.48 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  8  108 - 121  14   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    14    108 - 121      1.89     1.89 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1    6 - 11   6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3      6 - 8        0.40     4.81 
  LONGEST_CONTINUOUS_SEGMENT     3      7 - 9        0.59     5.49 
  LONGEST_CONTINUOUS_SEGMENT     3      8 - 10       0.78     5.54 
  LONGEST_CONTINUOUS_SEGMENT     3      9 - 11       0.18     7.11 
  LCS LOCAL_SCORE:             50.00 
 
 FRAGMENT  2   14 - 19   6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5     14 - 18       1.73     2.42 
  LONGEST_CONTINUOUS_SEGMENT     5     15 - 19       1.83     2.33 
  LCS LOCAL_SCORE:             83.33 
 
 FRAGMENT  3   21 - 30   10   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    10     21 - 30       1.53     1.53 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  4   32 - 53   22   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    10     32 - 41       1.90    10.29 
  LCS LOCAL_SCORE:             34.09 
 
 FRAGMENT  5   55 - 60   6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6     55 - 60       1.51     1.51 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  6   62 - 73   12   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     9     65 - 73       1.64     5.95 
  LCS LOCAL_SCORE:             65.97 
 
 FRAGMENT  7   77 - 92   16   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    16     77 - 92       1.48     1.48 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  8  108 - 121  14   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    14    108 - 121      1.89     1.89 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1    6 - 11   6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3      6 - 8        0.40     4.81 
  LONGEST_CONTINUOUS_SEGMENT     3      7 - 9        0.59     5.49 
  LONGEST_CONTINUOUS_SEGMENT     3      9 - 11       0.18     7.11 
  LCS LOCAL_SCORE:             50.00 
 
 FRAGMENT  2   14 - 19   6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4     14 - 17       0.55     3.95 
  LONGEST_CONTINUOUS_SEGMENT     4     16 - 19       0.91     3.85 
  LCS LOCAL_SCORE:             66.67 
 
 FRAGMENT  3   21 - 30   10   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6     21 - 26       0.97     2.98 
  LONGEST_CONTINUOUS_SEGMENT     6     22 - 27       0.91     2.30 
  LONGEST_CONTINUOUS_SEGMENT     6     23 - 28       0.92     2.44 
  LCS LOCAL_SCORE:             56.00 
 
 FRAGMENT  4   32 - 53   22   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6     33 - 38       0.72    11.24 
  LCS LOCAL_SCORE:             21.49 
 
 FRAGMENT  5   55 - 60   6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4     55 - 58       0.65     3.06 
  LONGEST_CONTINUOUS_SEGMENT     4     56 - 59       0.92     1.86 
  LONGEST_CONTINUOUS_SEGMENT     4     57 - 60       0.73     3.16 
  LCS LOCAL_SCORE:             66.67 
 
 FRAGMENT  6   62 - 73   12   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6     65 - 70       0.52     5.70 
  LCS LOCAL_SCORE:             41.67 
 
 FRAGMENT  7   77 - 92   16   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    11     80 - 90       0.90     2.00 
  LCS LOCAL_SCORE:             60.55 
 
 FRAGMENT  8  108 - 121  14   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    10    111 - 120      0.88     2.86 
  LCS LOCAL_SCORE:             63.27 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS       6       A     3    3    6       -        1   1   1   1   1   2   2   2   2   2   2   2   2   3   5   5   6   7   8  10  
 LCS       7       R     3    3    6       -        1   1   1   1   1   2   2   2   3   3   3   3   4   4   5   5   7   8  12  14  
 LCS       8       F     3    3    6       -        1   1   1   1   2   2   2   2   3   6   6   9  11  13  16  17  18  20  21  21  
 LCS       9       V     3    3    6       -        1   1   1   3   4   5   6   8  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      10       C     3    3    6       -        1   1   1   1   1   3   4   8  10  10  11  11  13  13  16  17  18  20  21  21  
 LCS      11       K     3    3    6       -        1   1   1   1   1   6   7   8  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      12       N     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      13       N     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      14       G     4    5    6       -        1   1   2   3   4   5   6   8  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      15       V     4    5    6       -        1   1   2   3   4   5   6   8  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      16       L     4    5    6       -        1   1   1   2   2   3   3   5  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      17       F     4    5    6       -        1   1   1   2   2   3   6   8  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      18       E     4    5    6       -        1   1   1   2   5   7   7   8  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      19       N     4    5    6       -        1   1   1   2   2   3   4   6  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      20       Q     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      21       L     6   10   10       -        1   2   2   3   4   4   4   4   4   4   4   4   5   5  16  17  18  20  21  21  
 LCS      22       L     6   10   10       -        1   2   2   3   4   4   4   4   4   4   5   5   6  13  16  17  18  20  21  21  
 LCS      23       Q     6   10   10       -        1   2   2   3   4   4   4   4   4   4   4   4   6   6   6   7   8  19  21  21  
 LCS      24       I     6   10   10       -        1   2   2   3   4   5   5   6   6   6   7   7   8  12  16  17  18  20  21  21  
 LCS      25       G     6   10   10       -        1   2   2   3   4   5   5   6   6   6   7   7   8   8   9   9  10  10  10  12  
 LCS      26       L     6   10   10       -        1   2   2   3   4   4   4   4   4   4   5   5   6   6   6   7   8  11  21  21  
 LCS      27       K     6   10   10       -        1   2   2   3   4   4   4   4   4   4   5   5   6   6   6   7   8   8   9  10  
 LCS      28       S     6   10   10       -        1   2   2   3   4   4   4   4   4   4   5   5   6   6   6   7   8   8  13  16  
 LCS      29       E     4   10   10       -        0   1   2   3   4   4   4   4   4   4   5   5   6   6   6   7   8  11  13  16  
 LCS      30       F     4   10   10       -        0   1   2   3   4   4   4   4   4   4   5   5   6   6   6   9   9  11  14  21  
 LCS      31       R     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      32       Q     3   10   13       -        0   1   1   2   3   4   4   5   5   7   7   7   7   7   9  10  11  12  14  20  
 LCS      33       N     6   10   13       -        0   2   2   3   3   4   4   5   5   9  11  11  12  13  16  17  18  20  21  21  
 LCS      34       L     6   10   13       -        0   2   2   3   3   4   4   5   5   7   7   7  12  13  14  16  18  20  21  21  
 LCS      35       G     6   10   13       -        1   2   2   3   3   4   4   5   5   7   7   7  12  13  15  17  18  20  21  21  
 LCS      36       R     6   10   13       -        1   2   2   3   3   4   4   5   5   7   7   7  11  13  14  17  18  20  21  21  
 LCS      37       M     6   10   13       -        1   2   2   3   3   4   4   5   5   7   7  11  12  13  16  17  18  20  21  21  
 LCS      38       F     6   10   13       -        1   2   2   3   3   4   4   5   5   7   7   7  11  13  16  17  18  20  21  21  
 LCS      39       I     5   10   13       -        1   2   2   3   3   4   4   5   6   9  11  12  13  13  16  17  18  20  21  21  
 LCS      40       F     5   10   13       -        1   2   2   3   3   4   4   5   6   7   7   7  11  13  16  17  18  20  21  21  
 LCS      41       Y     5   10   13       -        1   2   2   3   3   4   4   4   5   5   6   7  10  13  14  15  18  20  21  21  
 LCS      42       G     3    7   13       -        1   1   1   2   2   2   3   4   4   4   5   5   6   7   9  10  10  11  14  19  
 LCS      43       N     3    6   13       -        1   1   1   1   2   2   2   4   4   4   5   5   6   7   8   8   8  10  10  13  
 LCS      44       K     3    6   13       -        1   1   2   2   2   2   2   4   4   4   4   5   5   5   8   8   8   8   8   8  
 LCS      45       T     5    6   13       -        1   1   2   2   2   2   2   4   4   4   4   5   5   6   6   7   8   8   8   8  
 LCS      46       S     5    6   13       -        1   1   2   2   2   2   2   4   4   4   4   5   5   5   5   5   6   7   7   7  
 LCS      47       T     5    6   13       -        1   1   2   2   2   2   2   4   4   4   4   5   5   6   6   7   7   8   8   8  
 LCS      48       Q     5    6   13       -        0   1   2   2   2   2   2   4   4   4   4   5   5   6  10  10  14  16  18  20  
 LCS      49       F     5    6   13       -        1   1   2   2   2   2   3   4   5   5  10  12  13  13  16  17  18  20  21  21  
 LCS      50       L     4    4   13       -        1   1   1   1   1   2   3   4   4   4   5   5   6   6   8  11  18  20  21  21  
 LCS      51       N     4    4   13       -        1   1   1   1   1   2   3   3   4   4   5   5   6   6   8  11  18  20  21  21  
 LCS      52       F     4    4   13       -        1   1   1   1   1   1   2   2   4   4   5   5   6   6   8  10  14  20  21  21  
 LCS      53       T     4    4   12       -        1   1   1   1   1   2   3   3   4   4   5   5   8  10  16  17  18  20  21  21  
 LCS      54       P     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      55       T     4    6    6       -        0   1   1   2   2   2   4   5   6   8  10  12  13  13  16  17  18  20  21  21  
 LCS      56       L     4    6    6       -        1   1   1   2   2   2   4   5   6   7  10  12  13  13  16  17  18  20  21  21  
 LCS      57       I     4    6    6       -        1   1   1   2   2   2   4   5   6   8  10  12  13  13  16  17  18  20  21  21  
 LCS      58       C     4    6    6       -        1   1   1   2   2   2   4   5   6   8  10  12  13  13  16  17  18  20  21  21  
 LCS      59       A     4    6    6       -        1   1   1   2   2   2   4   5   6   8  10  12  13  13  16  17  18  20  21  21  
 LCS      60       D     4    6    6       -        1   1   1   2   2   2   4   5   6   6   6   7   8  10  10  16  18  20  21  21  
 LCS      61       D     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      62       L     3    3   12       -        1   1   1   1   1   2   3   3   6   6   6   9  13  13  16  17  18  20  21  21  
 LCS      63       Q     3    3   12       -        0   1   1   1   1   1   3   3   3   4   4   4   4   5   6   6   7   8  18  20  
 LCS      64       T     3    8   12       -        0   1   1   1   2   3   4   4   4   4   4   5   5   8   8  10  10  11  13  16  
 LCS      65       N     6    9   12       -        2   2   2   2   3   3   4   4   4   4   4   6   8   8   9  10  15  16  16  17  
 LCS      66       L     6    9   12       -        2   2   2   2   3   3   4   4   4   4   6   7   9  11  13  13  15  16  16  17  
 LCS      67       N     6    9   12       -        2   2   2   2   3   3   4   4   4   5   6   7   8   8   9  10  11  16  16  17  
 LCS      68       L     6    9   12       -        2   2   2   2   3   3   4   4   4   5   6   7   8   8  13  13  15  16  16  17  
 LCS      69       Q     6    9   12       -        2   2   2   2   3   3   5   5   6   6   7   7   8   8   9  10  11  12  16  17  
 LCS      70       T     6    9   12       -        1   2   2   2   3   3   4   4   4   5   6   7   8   8   9  10  15  16  16  17  
 LCS      71       K     5    9   12       -        1   2   2   2   3   3   4   4   4   5   6   7   8   8  13  13  15  16  16  17  
 LCS      72       P     5    9   12       -        1   2   2   2   3   3   4   4   4   5   6   7   8  11  13  13  15  16  16  17  
 LCS      73       V     5    9   12       -        0   2   2   2   3   3   4   4   4   5   8   8   9  11  13  13  15  16  17  19  
 LCS      74       D     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      75       P     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      76       T     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      77       V     4   16   16       -        1   2   4   5   6   7   7   8  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      78       D     8   16   16       -        1   2   4   5   6   7   7   8  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      79       G     8   16   16       -        1   2   4   5   6   7   7   8  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      80       G    11   16   16       -        1   3   4   5   6   7   7   8  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      81       A    11   16   16       -        2   3   4   5   6   7   7   8  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      82       Q    11   16   16       -        2   3   4   5   6   7   7   8  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      83       V    11   16   16       -        2   3   4   5   6   7   7   8  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      84       Q    11   16   16       -        2   3   4   5   6   7   7   8  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      85       Q    11   16   16       -        2   3   4   5   6   7   7   8  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      86       V    11   16   16       -        2   3   4   5   6   7   7   8  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      87       I    11   16   16       -        1   3   4   5   6   7   7   8  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      88       N    11   16   16       -        2   3   4   5   6   7   7   8  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      89       I    11   16   16       -        2   3   4   5   6   7   7   8  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      90       E    11   16   16       -        2   3   4   5   6   7   7   8  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      91       C     7   16   16       -        2   2   4   5   6   7   7   8  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      92       I     7   16   16       -        2   2   4   5   6   7   7   8  10  10  11  12  13  13  16  17  18  20  21  21  
 LCS      93       S     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      94       D     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      95       F     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      96       T     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      97       E     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      98       A     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      99       P     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     100       V     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     101       L     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     102       N     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     103       I     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     104       Q     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     105       F     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     106       R     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     107       Y     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     108       G     4   14   14       -        0   1   1   2   4   5   5   6   6   6   7   7   8   8   9   9  10  10  10  10  
 LCS     109       G     8   14   14       -        1   2   3   3   4   5   5   6   6   6   7   7   8   8   9   9  10  10  10  10  
 LCS     110       T     9   14   14       -        1   2   4   4   5   5   5   6   6   6   7   7   8   8   9   9  10  10  10  10  
 LCS     111       F    10   14   14       -        1   3   4   4   5   5   5   6   6   6   7   7   8   8   9   9  10  10  10  10  
 LCS     112       Q    10   14   14       -        1   3   4   4   5   5   5   6   6   6   7   7   8   8   9   9  10  10  10  10  
 LCS     113       N    10   14   14       -        2   3   4   4   5   5   5   6   6   6   7   7   8   8   9   9  10  10  10  10  
 LCS     114       V    10   14   14       -        2   3   4   4   5   5   5   6   6   6   7   7   8   8   9   9  10  10  10  10  
 LCS     115       S    10   14   14       -        2   3   4   4   5   5   5   6   6   6   7   7   8   8   9   9  10  10  10  10  
 LCS     116       V    10   14   14       -        2   3   4   4   5   5   5   6   6   6   7   7   8   8   9  10  10  11  12  13  
 LCS     117       K    10   14   14       -        2   3   4   4   5   5   5   6   6   6   7   7   8   8   9  10  10  11  12  13  
 LCS     118       L    10   14   14       -        2   3   4   4   5   5   5   6   6   6   7   7   8   8   9  10  10  12  13  16  
 LCS     119       P    10   14   14       -        1   2   4   4   5   5   5   6   6   6   7   7   8   8   9   9  10  10  10  10  
 LCS     120       I    10   14   14       -        2   3   4   4   5   5   5   6   6   6   7   7   8   8   9   9  10  10  10  10  
 LCS     121       T     3   14   14       -        1   1   4   4   5   5   5   6   6   6   7   7   8   8   9   9  10  10  10  10  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   1.01 
 
 NUMBER_OF_CA_Tg:  237      NUMBER_OF_CA_Pr:   92      PERCENT_OF_CA:  38.82  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max       6       9      11      14      16      17      18      20      25      25      27      29      31      33      38      42      44      49      51      52  
 GDT PERCENT_OF_CA_Pr    6.52    9.78   11.96   15.22   17.39   18.48   19.57   21.74   27.17   27.17   29.35   31.52   33.70   35.87   41.30   45.65   47.83   53.26   55.43   56.52 
 GDT PERCENT_OF_CA_Tg    2.53    3.80    4.64    5.91    6.75    7.17    7.59    8.44   10.55   10.55   11.39   12.24   13.08   13.92   16.03   17.72   18.57   20.68   21.52   21.94 
 GDT FRAGMENT: Beg-End 113-118  81-89   80-90   77-92   77-92   18-92   11-92   10-92    9-92    9-92    9-92    9-92    9-92    8-92    8-92    8-92    8-92    8-92    8-92    8-92  
 GDT RMS_LOCAL           0.31    0.67    0.90    1.31    1.48    1.70    1.91    2.35    3.08    3.08    3.64    4.34    4.54    4.89    5.64    6.08    6.22    6.60    6.82    6.96 
 GDT RMS_ALL_CA         21.65   16.92   17.04   16.45   16.52   16.43   16.43   16.47   16.37   16.37   16.32   15.68   15.63   15.60   15.32   15.36   15.30   15.14   15.18   15.17 
 
 
 TEST (CA)  RMS =  14.78               (Number of atoms:   92) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   14.78         92    38.8   237     CRMSCA  
     CRN = ALL/NP  . . . . .    0.1607                            CRMSCA  
     SECONDARY STRUCTURE . .   13.20         60    42.3   142     CRMSCA  
     SURFACE . . . . . . . .   16.67         52    38.8   134     CRMSCA  
     BURIED  . . . . . . . .   11.89         40    38.8   103     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   14.78         92     7.8  1172     CRMSMC  
     SECONDARY STRUCTURE . .   13.20         60     8.5   702     CRMSMC  
     SURFACE . . . . . . . .   16.67         52     7.9   662     CRMSMC  
     BURIED  . . . . . . . .   11.89         40     7.8   510     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    0.00          0     0.0   926     CRMSSC  
     RELIABLE SIDE CHAINS  .    0.00          0     0.0   762     CRMSSC  
     SECONDARY STRUCTURE . .    0.00          0     0.0   598     CRMSSC  
     SURFACE . . . . . . . .    0.00          0     0.0   507     CRMSSC  
     BURIED  . . . . . . . .    0.00          0     0.0   419     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   14.78         92     4.9  1874     CRMSALL 
     SECONDARY STRUCTURE . .   13.20         60     5.1  1166     CRMSALL 
     SURFACE . . . . . . . .   16.67         52     5.0  1043     CRMSALL 
     BURIED  . . . . . . . .   11.89         40     4.8   831     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   12.417      1.000       0.500     92    38.8   237     ERRCA  
     SECONDARY STRUCTURE . .   11.246      1.000       0.500     60    42.3   142     ERRCA  
     SURFACE . . . . . . . .   13.643      1.000       0.500     52    38.8   134     ERRCA  
     BURIED  . . . . . . . .   10.824      1.000       0.500     40    38.8   103     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   12.417      1.000       0.500     92     7.8  1172     ERRMC  
     SECONDARY STRUCTURE . .   11.246      1.000       0.500     60     8.5   702     ERRMC  
     SURFACE . . . . . . . .   13.643      1.000       0.500     52     7.9   662     ERRMC  
     BURIED  . . . . . . . .   10.824      1.000       0.500     40     7.8   510     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.000      0.000       0.000      0     0.0   926     ERRSC  
     RELIABLE SIDE CHAINS  .    0.000      0.000       0.000      0     0.0   762     ERRSC  
     SECONDARY STRUCTURE . .    0.000      0.000       0.000      0     0.0   598     ERRSC  
     SURFACE . . . . . . . .    0.000      0.000       0.000      0     0.0   507     ERRSC  
     BURIED  . . . . . . . .    0.000      0.000       0.000      0     0.0   419     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   12.417      1.000       0.500     92     4.9  1874     ERRALL 
     SECONDARY STRUCTURE . .   11.246      1.000       0.500     60     5.1  1166     ERRALL 
     SURFACE . . . . . . . .   13.643      1.000       0.500     52     5.0  1043     ERRALL 
     BURIED  . . . . . . . .   10.824      1.000       0.500     40     4.8   831     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         0         3         9        46      92     237   DISTCA 
CA  (P)      0.00      0.00      1.27      3.80     19.41             237   DISTCA 
CA  (RMS)    0.00      0.00      2.81      4.04      7.52                   DISTCA 
 
ALL (N)         0         0         3         9        46      92    1874   DISTALL 
ALL (P)      0.00      0.00      0.16      0.48      2.45            1874   DISTALL 
ALL (RMS)    0.00      0.00      2.81      4.04      7.52                   DISTALL 
 
 
 
 
END of the results output 
