 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
#          The number of residues in SS section: 237 , MODEL 237 , TARGET 332 
#          The number of residues possible to evaluate: 237 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP     3     S     E     C             1.00 
 SSP     4     V     E     E             1.00 
 SSP     5     T     C     E             1.00 
 SSP     6     L     C     E             1.00 
 SSP     7     F     E     E             1.00 
 SSP     8     G     E     E             1.00 
 SSP     9     I     E     E             1.00 
 SSP    10     V     E     E             1.00 
 SSP    11     D     E     C             1.00 
 SSP  BREAK 
 SSP    15     A     E     C             1.00 
 SSP    16     Y     E     E             1.00 
 SSP    17     V     E     E             1.00 
 SSP    18     N     C     C             1.00 
 SSP    19     K     C     C             1.00 
 SSP  BREAK 
 SSP    22     A     C     C             1.00 
 SSP    23     G     C     E             1.00 
 SSP    24     D     C     C             1.00 
 SSP    25     S     C     C             1.00 
 SSP  BREAK 
 SSP    30     G     E     C             1.00 
 SSP    31     T     E     C             1.00 
 SSP    32     S     C     E             1.00 
 SSP    33     G     C     C             1.00 
 SSP    34     A     C     C             1.00 
 SSP  BREAK 
 SSP    38     R     E     C             1.00 
 SSP    39     L     E     E             1.00 
 SSP    40     G     E     E             1.00 
 SSP    41     L     C     E             1.00 
 SSP    42     R     C     E             1.00 
 SSP    43     G     E     E             1.00 
 SSP    44     T     E     E             1.00 
 SSP    45     E     E     E             1.00 
 SSP    46     D     E     E             1.00 
 SSP    47     L     C     C             1.00 
 SSP    48     G     C     C             1.00 
 SSP  BREAK 
 SSP    50     G     C     C             1.00 
 SSP    51     L     C     C             1.00 
 SSP    52     K     E     C             1.00 
 SSP    53     A     E     E             1.00 
 SSP    54     G     E     E             1.00 
 SSP    55     F     E     E             1.00 
 SSP    56     W     C     E             1.00 
 SSP    57     L     C     E             1.00 
 SSP    58     E     E     E             1.00 
 SSP    59     G     E     E             1.00 
 SSP    60     E     E     E             1.00 
 SSP    61     I     C     C             1.00 
 SSP    62     F     C     C             1.00 
 SSP    63     G     C     C             1.00 
 SSP    64     D     C     C             1.00 
 SSP  BREAK 
 SSP    74     K     C     C             1.00 
 SSP    75     R     C     E             1.00 
 SSP    76     R     E     E             1.00 
 SSP    77     S     E     E             1.00 
 SSP    78     T     E     E             1.00 
 SSP    79     V     E     E             1.00 
 SSP    80     S     E     E             1.00 
 SSP    81     L     E     E             1.00 
 SSP    82     S     E     E             1.00 
 SSP    83     G     E     E             1.00 
 SSP    84     N     C     C             1.00 
 SSP  BREAK 
 SSP   107     F     C     C             1.00 
 SSP   108     S     C     C             1.00 
 SSP   109     A     C     E             1.00 
 SSP   110     T     C     E             1.00 
 SSP   111     G     C     E             1.00 
 SSP   112     I     C     E             1.00 
 SSP   113     G     C     E             1.00 
 SSP  BREAK 
 SSP   118     F     C     E             1.00 
 SSP   119     R     C     E             1.00 
 SSP   120     N     C     E             1.00 
 SSP   121     W     C     C             1.00 
 SSP   122     A     C     C             1.00 
 SSP   123     A     C     C             1.00 
 SSP   124     G     C     C             1.00 
 SSP  BREAK 
 SSP   143     P     C     C             1.00 
 SSP   144     N     C     E             1.00 
 SSP   145     F     E     E             1.00 
 SSP   146     G     C     E             1.00 
 SSP   147     G     C     E             1.00 
 SSP   148     F     E     E             1.00 
 SSP   149     N     E     E             1.00 
 SSP   150     A     E     E             1.00 
 SSP   151     G     E     E             1.00 
 SSP   152     F     E     E             1.00 
 SSP   153     G     E     E             1.00 
 SSP   154     Y     E     C             1.00 
 SSP   155     A     E     C             1.00 
 SSP   156     F     C     C             1.00 
 SSP   157     D     C     C             1.00 
 SSP  BREAK 
 SSP   161     T     C     C             1.00 
 SSP   162     I     C     C             1.00 
 SSP   163     G     C     C             1.00 
 SSP   164     T     C     E             1.00 
 SSP   165     A     C     E             1.00 
 SSP   166     D     C     E             1.00 
 SSP   167     S     C     E             1.00 
 SSP   168     V     E     E             1.00 
 SSP   169     G     C     E             1.00 
 SSP   170     R     C     E             1.00 
 SSP   171     Y     E     E             1.00 
 SSP   172     I     E     C             1.00 
 SSP   173     G     E     C             1.00 
 SSP   174     G     E     E             1.00 
 SSP   175     Y     E     C             1.00 
 SSP   176     V     E     C             1.00 
 SSP   177     A     E     E             1.00 
 SSP   178     Y     E     C             1.00 
 SSP   179     D     E     C             1.00 
 SSP   180     N     C     E             1.00 
 SSP   181     G     C     E             1.00 
 SSP   182     P     C     E             1.00 
 SSP   183     L     E     E             1.00 
 SSP   184     S     E     E             1.00 
 SSP   185     A     E     E             1.00 
 SSP   186     S     E     E             1.00 
 SSP   187     L     E     E             1.00 
 SSP   188     G     E     E             1.00 
 SSP   189     L     E     E             1.00 
 SSP   190     A     E     C             1.00 
 SSP  BREAK 
 SSP   193     K     E     C             1.00 
 SSP   194     T     E     E             1.00 
 SSP   195     A     E     E             1.00 
 SSP   196     V     E     E             1.00 
 SSP   197     G     C     E             1.00 
 SSP   198     G     C     E             1.00 
 SSP   199     L     E     E             1.00 
 SSP   200     A     E     E             1.00 
 SSP   201     T     E     E             1.00 
 SSP   202     D     E     E             1.00 
 SSP   203     R     E     E             1.00 
 SSP   204     D     E     C             1.00 
 SSP  BREAK 
 SSP   207     T     E     C             1.00 
 SSP   208     L     E     C             1.00 
 SSP   209     G     E     C             1.00 
 SSP   210     A     E     E             1.00 
 SSP   211     S     E     E             1.00 
 SSP   212     Y     E     E             1.00 
 SSP   213     N     C     E             1.00 
 SSP   214     F     C     E             1.00 
 SSP   215     G     C     E             1.00 
 SSP   216     V     C     E             1.00 
 SSP   217     A     C     E             1.00 
 SSP   218     K     E     E             1.00 
 SSP   219     L     E     E             1.00 
 SSP   220     S     E     E             1.00 
 SSP   221     G     E     E             1.00 
 SSP   222     L     E     C             1.00 
 SSP  BREAK 
 SSP   224     Q     C     C             1.00 
 SSP   225     Q     E     E             1.00 
 SSP   226     T     E     E             1.00 
 SSP   227     K     E     E             1.00 
 SSP   228     F     E     E             1.00 
 SSP   229     K     E     E             1.00 
 SSP   230     R     E     E             1.00 
 SSP   231     D     C     E             1.00 
 SSP   232     I     C     E             1.00 
 SSP   233     G     C     E             1.00 
 SSP   234     G     C     E             1.00 
 SSP   235     D     E     E             1.00 
 SSP   236     I     E     C             1.00 
 SSP   237     K     E     C             1.00 
 SSP  BREAK 
 SSP   242     M     E     C             1.00 
 SSP   243     L     E     E             1.00 
 SSP   244     G     E     E             1.00 
 SSP   245     A     E     E             1.00 
 SSP   246     S     E     C             1.00 
 SSP  BREAK 
 SSP   248     P     E     C             1.00 
 SSP   249     V     C     E             1.00 
 SSP   250     G     C     E             1.00 
 SSP   251     G     C     E             1.00 
 SSP   252     V     C     C             1.00 
 SSP   253     G     E     C             1.00 
 SSP   254     E     E     E             1.00 
 SSP   255     V     E     E             1.00 
 SSP   256     K     E     E             1.00 
 SSP   257     L     E     E             1.00 
 SSP   258     Q     E     E             1.00 
 SSP   259     Y     E     E             1.00 
 SSP   260     A     E     E             1.00 
 SSP   261     L     E     E             1.00 
 SSP   262     Y     E     E             1.00 
 SSP   263     D     E     E             1.00 
 SSP   264     Q     E     E             1.00 
 SSP   265     K     H     E             1.00 
 SSP   266     A     H     C             1.00 
 SSP   267     I     H     C             1.00 
 SSP   268     D     C     C             1.00 
 SSP  BREAK 
 SSP   271     A     E     C             1.00 
 SSP   272     H     E     E             1.00 
 SSP   273     Q     E     E             1.00 
 SSP   274     I     E     E             1.00 
 SSP   275     T     E     E             1.00 
 SSP   276     L     E     E             1.00 
 SSP   277     G     E     E             1.00 
 SSP   278     Y     E     E             1.00 
 SSP   279     V     E     E             1.00 
 SSP   280     H     E     E             1.00 
 SSP   281     N     E     E             1.00 
 SSP   282     L     C     E             1.00 
 SSP   283     S     C     C             1.00 
 SSP  BREAK 
 SSP   286     T     E     C             1.00 
 SSP   287     A     E     E             1.00 
 SSP   288     L     E     E             1.00 
 SSP   289     Y     E     E             1.00 
 SSP   290     G     C     E             1.00 
 SSP   291     N     C     E             1.00 
 SSP   292     L     E     E             1.00 
 SSP   293     A     E     E             1.00 
 SSP   294     F     E     C             1.00 
 SSP  BREAK 
 SSP   300     A     C     C             1.00 
 SSP   301     S     C     E             1.00 
 SSP   302     T     C     E             1.00 
 SSP   303     L     C     C             1.00 
 SSP   304     G     C     C             1.00 
 SSP   305     L     C     C             1.00 
 SSP   306     Q     C     E             1.00 
 SSP   307     A     E     E             1.00 
 SSP   308     K     C     E             1.00 
 SSP   309     G     C     C             1.00 
 SSP   310     V     C     C             1.00 
 SSP  BREAK 
 SSP   312     A     C     C             1.00 
 SSP   313     G     C     E             1.00 
 SSP   314     G     C     E             1.00 
 SSP   315     V     C     E             1.00 
 SSP   316     Q     C     C             1.00 
 SSP  BREAK 
 SSP   318     G     C     C             1.00 
 SSP   319     E     C     E             1.00 
 SSP   320     S     E     C             1.00 
 SSP   321     Q     E     E             1.00 
 SSP   322     T     E     E             1.00 
 SSP   323     G     E     C             1.00 
 SSP  BREAK 
 SSP   327     G     E     C             1.00 
 SSP   328     I     E     E             1.00 
 SSP   329     R     E     E             1.00 
 SSP   330     H     E     E             1.00 
 SSP   331     A     E     E             1.00 
 SSP   332     F     C     C             1.00 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              61.6       0.0     75.2     44.3     71.4 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        54.1       0.0     62.1     44.6     71.4 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG           21              95.2               4.8 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 6 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00     237    100.0     61.6 
 
 BIN  0.00 - 1.00      1.00     237    100.0     61.6 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
# WARNING! The number of residues with CB atom coordinates: MODEL 0 , TARGET 278 
 
# WARNING! TARGET 2461 atoms, MODEL 1690 atoms, 1690 common with TARGET 
           Number of atoms possible to evaluate: 948 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    72.30           49.5   430    65.0   662     ARMSMC  
     SECONDARY STRUCTURE . .    45.45           68.7   246    70.7   348     ARMSMC  
     SURFACE . . . . . . . .    76.85           44.6   249    66.9   372     ARMSMC  
     BURIED  . . . . . . . .    65.52           56.4   181    62.4   290     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   245     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   226     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   135     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   145     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   100     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   180     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   129     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    97     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   115     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    65     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    56     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    41     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    33     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    33     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    23     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    31     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    31     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    17     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    20     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    11     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1    3 - 11   9    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     9      3 - 11       0.66     0.66 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   15 - 19   5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5     15 - 19       1.31     1.31 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3   22 - 25   4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4     22 - 25       1.74     1.74 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  4   30 - 34   5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5     30 - 34       1.80     1.80 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  5   38 - 48   11   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    11     38 - 48       0.78     0.78 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  6   50 - 64   15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    15     50 - 64       2.03     2.03 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  7   74 - 84   11   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    11     74 - 84       2.32     2.32 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  8  107 - 113  7    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7    107 - 113      4.49     4.49 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  9  118 - 124  7    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7    118 - 124      1.80     1.80 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 10  143 - 157  15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    15    143 - 157      3.28     3.28 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 11  161 - 190  30   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    16    162 - 177      4.99    19.87 
  LCS LOCAL_SCORE:             45.22 
 
 FRAGMENT 12  193 - 204  12   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     9    196 - 204      4.64    12.05 
  LCS LOCAL_SCORE:             70.83 
 
 FRAGMENT 13  207 - 222  16   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    11    207 - 217      3.74    17.02 
  LCS LOCAL_SCORE:             64.84 
 
 FRAGMENT 14  224 - 237  14   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    11    224 - 234      4.44    10.66 
  LCS LOCAL_SCORE:             73.98 
 
 FRAGMENT 15  242 - 246  5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    242 - 246      0.16     0.16 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 16  248 - 268  21   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    19    248 - 266      4.80     5.84 
  LONGEST_CONTINUOUS_SEGMENT    19    249 - 267      4.63     5.65 
  LONGEST_CONTINUOUS_SEGMENT    19    250 - 268      4.48     5.97 
  LCS LOCAL_SCORE:             90.48 
 
 FRAGMENT 17  271 - 283  13   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    13    271 - 283      0.98     0.98 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 18  286 - 294  9    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     9    286 - 294      2.06     2.06 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 19  300 - 310  11   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     9    302 - 310      4.60     8.68 
  LCS LOCAL_SCORE:             78.51 
 
 FRAGMENT 20  312 - 316  5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    312 - 316      1.49     1.49 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 21  318 - 323  6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6    318 - 323      0.40     0.40 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 22  327 - 332  6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6    327 - 332      1.04     1.04 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1    3 - 11   9    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     9      3 - 11       0.66     0.66 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   15 - 19   5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5     15 - 19       1.31     1.31 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3   22 - 25   4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4     22 - 25       1.74     1.74 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  4   30 - 34   5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5     30 - 34       1.80     1.80 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  5   38 - 48   11   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    11     38 - 48       0.78     0.78 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  6   50 - 64   15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    14     51 - 64       1.86     2.28 
  LCS LOCAL_SCORE:             92.89 
 
 FRAGMENT  7   74 - 84   11   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     9     76 - 84       1.60     2.82 
  LCS LOCAL_SCORE:             74.38 
 
 FRAGMENT  8  107 - 113  7    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    108 - 112      1.99     5.01 
  LCS LOCAL_SCORE:             67.35 
 
 FRAGMENT  9  118 - 124  7    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7    118 - 124      1.80     1.80 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 10  143 - 157  15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    11    145 - 155      1.91     4.06 
  LCS LOCAL_SCORE:             62.67 
 
 FRAGMENT 11  161 - 190  30   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    10    181 - 190      1.68    25.77 
  LCS LOCAL_SCORE:             25.78 
 
 FRAGMENT 12  193 - 204  12   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7    198 - 204      1.90    13.07 
  LCS LOCAL_SCORE:             51.39 
 
 FRAGMENT 13  207 - 222  16   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     9    207 - 215      1.97    18.13 
  LONGEST_CONTINUOUS_SEGMENT     9    208 - 216      1.78    17.08 
  LCS LOCAL_SCORE:             51.56 
 
 FRAGMENT 14  224 - 237  14   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     9    224 - 232      1.82    12.05 
  LCS LOCAL_SCORE:             53.57 
 
 FRAGMENT 15  242 - 246  5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    242 - 246      0.16     0.16 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 16  248 - 268  21   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    14    253 - 266      1.85     6.77 
  LCS LOCAL_SCORE:             51.47 
 
 FRAGMENT 17  271 - 283  13   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    13    271 - 283      0.98     0.98 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 18  286 - 294  9    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     8    287 - 294      1.93     2.44 
  LCS LOCAL_SCORE:             87.65 
 
 FRAGMENT 19  300 - 310  11   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6    300 - 305      1.85    14.49 
  LONGEST_CONTINUOUS_SEGMENT     6    304 - 309      1.94    10.45 
  LCS LOCAL_SCORE:             52.07 
 
 FRAGMENT 20  312 - 316  5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    312 - 316      1.49     1.49 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 21  318 - 323  6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6    318 - 323      0.40     0.40 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 22  327 - 332  6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6    327 - 332      1.04     1.04 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1    3 - 11   9    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     9      3 - 11       0.66     0.66 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   15 - 19   5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4     15 - 18       0.30     2.33 
  LCS LOCAL_SCORE:             76.00 
 
 FRAGMENT  3   22 - 25   4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3     22 - 24       0.72     3.10 
  LONGEST_CONTINUOUS_SEGMENT     3     23 - 25       0.50     3.28 
  LCS LOCAL_SCORE:             75.00 
 
 FRAGMENT  4   30 - 34   5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4     30 - 33       0.76     2.55 
  LCS LOCAL_SCORE:             76.00 
 
 FRAGMENT  5   38 - 48   11   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    11     38 - 48       0.78     0.78 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  6   50 - 64   15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7     53 - 59       0.93     5.55 
  LONGEST_CONTINUOUS_SEGMENT     7     54 - 60       0.72     5.91 
  LCS LOCAL_SCORE:             41.33 
 
 FRAGMENT  7   74 - 84   11   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4     76 - 79       0.76    12.00 
  LONGEST_CONTINUOUS_SEGMENT     4     78 - 81       0.79     5.46 
  LONGEST_CONTINUOUS_SEGMENT     4     80 - 83       0.83    10.56 
  LONGEST_CONTINUOUS_SEGMENT     4     81 - 84       0.88    13.88 
  LCS LOCAL_SCORE:             34.71 
 
 FRAGMENT  8  107 - 113  7    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    107 - 109      0.78     9.85 
  LONGEST_CONTINUOUS_SEGMENT     3    108 - 110      0.85     6.71 
  LONGEST_CONTINUOUS_SEGMENT     3    109 - 111      0.27     5.96 
  LONGEST_CONTINUOUS_SEGMENT     3    110 - 112      0.21     5.76 
  LONGEST_CONTINUOUS_SEGMENT     3    111 - 113      0.75    10.03 
  LCS LOCAL_SCORE:             42.86 
 
 FRAGMENT  9  118 - 124  7    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    118 - 121      0.39     3.23 
  LCS LOCAL_SCORE:             51.02 
 
 FRAGMENT 10  143 - 157  15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7    148 - 154      0.88     7.53 
  LONGEST_CONTINUOUS_SEGMENT     7    149 - 155      0.74     8.56 
  LCS LOCAL_SCORE:             38.22 
 
 FRAGMENT 11  161 - 190  30   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     9    182 - 190      0.59    26.53 
  LCS LOCAL_SCORE:             18.89 
 
 FRAGMENT 12  193 - 204  12   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    193 - 197      0.87    19.92 
  LONGEST_CONTINUOUS_SEGMENT     5    199 - 203      0.87    13.43 
  LONGEST_CONTINUOUS_SEGMENT     5    200 - 204      0.87    13.38 
  LCS LOCAL_SCORE:             40.28 
 
 FRAGMENT 13  207 - 222  16   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7    208 - 214      0.99    17.81 
  LONGEST_CONTINUOUS_SEGMENT     7    209 - 215      0.98    17.62 
  LCS LOCAL_SCORE:             35.55 
 
 FRAGMENT 14  224 - 237  14   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6    224 - 229      0.87    13.36 
  LONGEST_CONTINUOUS_SEGMENT     6    225 - 230      0.99    12.95 
  LCS LOCAL_SCORE:             35.20 
 
 FRAGMENT 15  242 - 246  5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    242 - 246      0.16     0.16 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 16  248 - 268  21   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     8    256 - 263      0.93    10.22 
  LCS LOCAL_SCORE:             27.89 
 
 FRAGMENT 17  271 - 283  13   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    13    271 - 283      0.98     0.98 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 18  286 - 294  9    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    288 - 292      0.83     4.20 
  LONGEST_CONTINUOUS_SEGMENT     5    290 - 294      0.87     2.81 
  LCS LOCAL_SCORE:             53.09 
 
 FRAGMENT 19  300 - 310  11   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    300 - 304      0.92    15.10 
  LONGEST_CONTINUOUS_SEGMENT     5    305 - 309      1.00    13.00 
  LCS LOCAL_SCORE:             41.32 
 
 FRAGMENT 20  312 - 316  5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    312 - 314      0.10     3.28 
  LONGEST_CONTINUOUS_SEGMENT     3    313 - 315      0.88     2.88 
  LONGEST_CONTINUOUS_SEGMENT     3    314 - 316      0.32     2.29 
  LCS LOCAL_SCORE:             60.00 
 
 FRAGMENT 21  318 - 323  6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6    318 - 323      0.40     0.40 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 22  327 - 332  6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    327 - 331      0.68     1.39 
  LONGEST_CONTINUOUS_SEGMENT     5    328 - 332      0.83     1.35 
  LCS LOCAL_SCORE:             83.33 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS       3       S     9    9    9       E        3   6   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS       4       V     9    9    9       E        2   6   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS       5       T     9    9    9       C        2   5   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS       6       L     9    9    9       C        2   6   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS       7       F     9    9    9       E        2   6   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS       8       G     9    9    9       E        3   6   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS       9       I     9    9    9       E        3   6   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      10       V     9    9    9       E        3   6   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      11       D     9    9    9       E        3   6   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      12       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      13       N     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      14       V     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      15       A     4    5    5       E        1   1   3   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      16       Y     4    5    5       E        1   1   3   3   9  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      17       V     4    5    5       E        1   1   1   7   9  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      18       N     4    5    5       C        1   1   3   4  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      19       K     3    5    5       C        0   0   7   7   9  12  13  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      20       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      21       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      22       A     3    4    4       C        0   0   2   2   6  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      23       G     3    4    4       C        0   0   0   0   0   1   1   3  17  19  22  24  25  25  25  26  28  28  28  29  
 LCS      24       D     3    4    4       C        0   0   0   0   0   1   1   1   1   1   2   5   7   8   9  24  28  28  28  29  
 LCS      25       S     3    4    4       C        0   0   0   0   0   1   1   2   2   3   4   5   6   8   9  25  28  28  28  29  
 LCS      26       R     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      27       Y     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      28       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      29       L     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      30       G     4    5    5       E        0   0   1   1   1   3   3   3   3   4   4   4   5   5   7  23  27  28  28  29  
 LCS      31       T     4    5    5       E        0   0   1   1   1   1   1   1   1   1   1   2   5   5   5   5   6  15  16  22  
 LCS      32       S     4    5    5       C        0   0   1   1   1   1   1   1   1   1   1   2   3   3   3   4  15  15  17  18  
 LCS      33       G     4    5    5       C        0   0   1   1   1   1   1   6   8   9  11  12  13  16  16  18  19  24  25  27  
 LCS      34       A     3    5    5       C        0   0   0   1   3   4   4   6   6   9  11  12  13  16  16  16  19  21  22  26  
 LCS      35       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      36       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      37       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      38       R    11   11   11       E        3   6   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      39       L    11   11   11       E        3   6   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      40       G    11   11   11       E        3   6   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      41       L    11   11   11       C        2   5   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      42       R    11   11   11       C        2   5   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      43       G    11   11   11       E        2   6   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      44       T    11   11   11       E        3   6   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      45       E    11   11   11       E        3   6   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      46       D    11   11   11       E        3   6   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      47       L    11   11   11       C        3   6   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      48       G    11   11   11       C        2   6   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      49       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      50       G     3   13   15       C        0   1   4   7  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      51       L     5   14   15       C        1   1   2   3  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      52       K     5   14   15       E        1   1   1   3   4  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      53       A     7   14   15       E        1   1   2   3  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      54       G     7   14   15       E        1   1   3   3   9  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      55       F     7   14   15       E        1   1   2   3  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      56       W     7   14   15       C        1   1   3   3   9  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      57       L     7   14   15       C        1   1   2   3  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      58       E     7   14   15       E        1   1   3   6  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      59       G     7   14   15       E        1   1   2   6  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      60       E     7   14   15       E        1   1   3   3   9  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      61       I     6   14   15       C        1   1   2   6  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      62       F     6   14   15       C        1   1   3   3   9  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      63       G     6   14   15       C        1   1   2   2   3   9  12  14  18  19  22  24  25  25  25  26  28  28  28  29  
 LCS      64       D     6   14   15       C        0   1   3   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS      65       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      66       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      67       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      68       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      69       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      70       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      71       F     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      72       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      73       F     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      74       K     3    3   11       C        0   0   0   1   8  10  11  12  17  19  22  24  25  25  25  26  28  28  28  29  
 LCS      75       R     3    6   11       C        0   1   1   5   9   9  11  15  17  20  22  24  25  25  25  26  28  28  28  29  
 LCS      76       R     4    9   11       E        0   1   1   5   5  10  11  13  17  19  22  24  25  25  25  26  28  28  28  29  
 LCS      77       S     4    9   11       E        0   1   1   6   6   8  10  14  17  20  22  24  25  25  25  26  28  28  28  29  
 LCS      78       T     4    9   11       E        0   1   1   6   9  10  11  15  17  20  22  24  25  25  25  26  28  28  28  29  
 LCS      79       V     4    9   11       E        0   1   1   5   6   7  11  15  17  19  22  24  25  25  25  26  28  28  28  29  
 LCS      80       S     4    9   11       E        0   1   3   8   9  10  12  15  17  20  22  24  25  25  25  26  28  28  28  29  
 LCS      81       L     4    9   11       E        0   1   1   8   9  10  11  15  17  20  22  24  25  25  25  26  28  28  28  29  
 LCS      82       S     4    9   11       E        0   1   1   8   9  11  13  15  17  20  22  24  25  25  25  26  28  28  28  29  
 LCS      83       G     4    9   11       E        0   1   3   8   9  10  13  15  17  20  22  24  25  25  25  26  28  28  28  29  
 LCS      84       N     4    9   11       C        0   1   1   3   4  11  13  15  17  20  22  24  25  25  25  26  28  28  28  29  
 LCS      85       F     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      86       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      87       E     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      88       V     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      89       R     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      90       L     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      91       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      92       R     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      93       D     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      94       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      95       V     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      96       P     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      97       T     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      98       S     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      99       Q     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     100       K     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     101       L     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     102       T     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     103       S     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     104       Y     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     105       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     106       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     107       F     3    4    7       C        0   0   0   0   1   1   1   2   3   4   4   4   5   5   5   5   6   6   6   7  
 LCS     108       S     3    5    7       C        0   0   0   1   1   1   1   2   3   4   4   4   5   5   5   5   6   6   6   7  
 LCS     109       A     3    5    7       C        0   0   0   1   1   1   1   1   2   2   4   4   5   5   5   5   6   6   6   7  
 LCS     110       T     3    5    7       C        0   0   1   1   1   1   1   1   1   1   2   2   2   2   3   3   3   4   6   7  
 LCS     111       G     3    5    7       C        0   0   1   1   1   1   1   1   1   1   2   2   2   3   3   5   5   6   6   7  
 LCS     112       I     3    5    7       C        0   0   1   1   1   1   1   3   3   3   3   3   3   4   4   5   5   6   6   7  
 LCS     113       G     3    4    7       C        0   0   0   0   1   1   1   1   1   3   3   3   4   4   4   5   5   6   8   8  
 LCS     114       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     115       F     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     116       M     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     117       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     118       F     4    7    7       C        1   1   1   1   1   2   2   2   2   2   3   4   4   4   5  10  12  14  15  15  
 LCS     119       R     4    7    7       C        1   1   1   1   1   2   2   2   2   2   3   4   4   4   8  10  12  14  15  15  
 LCS     120       N     4    7    7       C        1   1   1   1   1   2   2   3   3   3   3   4   4   4   5   6   7   7  15  15  
 LCS     121       W     4    7    7       C        1   1   1   1   1   2   2   2   3   3   3   3   4   4   4   6  12  14  15  15  
 LCS     122       A     3    7    7       C        0   0   1   1   1   2   2   2   3   3   3   4   4   4   5   6   7   7   8   8  
 LCS     123       A     3    7    7       C        0   0   0   0   1   2   2   2   3   3   3   3   4   5   5   6   7   7   8   9  
 LCS     124       G     3    7    7       C        0   0   1   1   1   2   2   2   2   2   3   4   4   4   5   6   7  20  21  21  
 LCS     125       Q     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     126       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     127       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     128       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     129       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     130       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     131       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     132       I     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     133       R     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     134       A     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     135       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     136       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     137       L     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     138       I     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     139       S     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     140       Y     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     141       Y     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     142       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     143       P     4    6   15       C        0   1   1   1   1   2   2   3   4   4   4   4   5   5   5   5   6   6   6   7  
 LCS     144       N     4    6   15       C        0   1   1   1   1   2   2   3   4   4   4   4   4   4   4   4   4   5   6   6  
 LCS     145       F     4   11   15       E        0   1   1   2   2   3   3   3   4   4   4   4   4   4   4   5   5   6   6   6  
 LCS     146       G     6   11   15       C        0   1   2   2   2   3   3   3   4   4   4   4   4   4   4   7   8   9   9  12  
 LCS     147       G     6   11   15       C        0   1   2   2   2   3   3   3   4   4   4   4   4   5   5   7   8   9   9  12  
 LCS     148       F     7   11   15       E        0   1   2   2   2   3   3   3   4   4   4   4   4   5   5   7   8   9   9  10  
 LCS     149       N     7   11   15       E        1   2   2   2   2   3   3   3   4   4   4   4   4   5   5   7   8   9  10  12  
 LCS     150       A     7   11   15       E        1   2   2   2   2   3   3   3  11  12  15  17  19  23  23  25  26  28  28  28  
 LCS     151       G     7   11   15       E        1   2   2   2   2   9  12  15  17  20  22  24  25  25  25  26  28  28  28  29  
 LCS     152       F     7   11   15       E        1   3   3   5   7  11  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS     153       G     7   11   15       E        1   2   2   2   2   3   3   3   4  15  18  20  21  24  25  26  28  28  28  29  
 LCS     154       Y     7   11   15       E        1   2   2   2   2   3   3   3   4   4  12  13  13  15  15  17  19  20  21  28  
 LCS     155       A     7   11   15       E        1   2   2   2   2   3   3   3   4   4   4   4   5   5   6   7   9   9   9  12  
 LCS     156       F     3    4   15       C        0   0   0   1   1   2   3   3   4   4   4   4   5   5   6   7   9   9   9  12  
 LCS     157       D     3    4   15       C        0   0   0   1   1   1   1   1   2   3   4   4   5   5   6   7   9   9   9  12  
 LCS     158       E     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     159       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     160       Q     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     161       T     4    4    8       C        0   1   1   1   1   1   1   1   1   1   1   4   5   5   6   7   9   9   9  12  
 LCS     162       I     4    4   16       C        0   1   1   1   1   1   1   1   1   1   1   2   3   4   6   7   9   9   9  12  
 LCS     163       G     4    5   16       C        0   1   1   1   1   1   1   2   3   4   4   4   4   5   5   5   7   7   8   8  
 LCS     164       T     4    5   16       C        0   1   1   1   1   2   2   3   3   4   4   4   4   5   5   5   7   8   8   8  
 LCS     165       A     4    5   16       C        0   0   1   1   1   2   2   3   3   4   4   4   4   5   6   6   7   8   8  10  
 LCS     166       D     4    5   16       C        0   0   1   1   2   2   2   3   3   4   4   5   5   5   6   6   7   8   9  10  
 LCS     167       S     4    5   16       C        0   0   1   1   2   2   2   3   3   4   4   4   4   5   6   6   7   8  21  21  
 LCS     168       V     4    8   16       E        0   0   1   1   2   2   2   3   3   4   4   4   4   5   6   6  19  20  21  21  
 LCS     169       G     5    8   16       C        1   1   1   2   2   2   2   3   3   4   4  18  20  23  25  26  28  28  28  29  
 LCS     170       R     5    8   16       C        1   2   3   5   7   9  12  15  18  19  22  23  25  25  25  26  28  28  28  29  
 LCS     171       Y     5    8   16       E        1   1   4   7   9  12  14  15  17  20  22  24  25  25  25  26  28  28  28  29  
 LCS     172       I     5    8   16       E        1   1   2   3   4   5   6   7  13  17  19  21  22  25  25  26  27  28  28  29  
 LCS     173       G     5    8   16       E        0   1   1   2   2   2   2   3   3   5  13  14  15  16  17  22  23  24  25  26  
 LCS     174       G     4    8   16       E        0   1   1   2   2   2   2   3   3   4   8   8   9   9  10  12  12  13  14  19  
 LCS     175       Y     4    8   16       E        0   1   1   2   2   2   2   3   3   4   4   4   4   5   6   6   7   8  14  16  
 LCS     176       V     4    7   16       E        1   1   1   1   1   2   2   2   3   4   4   4   4   5   5  12  12  13  14  16  
 LCS     177       A     4    7   16       E        1   1   1   1   1   2   2   2   2   2   3   3   3   4   5   6   6   7   7  16  
 LCS     178       Y     4    7   11       E        1   1   1   1   1   2   2   2   2   2   3   3   3   3   4   4   6   7   7   8  
 LCS     179       D     4    7   11       E        1   1   1   1   1   2   2   2   2   3   3   4   4   5   5   7   8   9   9  10  
 LCS     180       N     4    7   11       C        0   1   1   1   1   2   2   2   2   2   3   3   5   5   5   5   6   7   7   8  
 LCS     181       G     4   10   11       C        0   1   1   1   2   2   3   3   3   4   4   4   5   5   5   5   6   7   7   8  
 LCS     182       P     9   10   11       C        2   2   2   3   3   3   3   3   3   4   4   4   5   5   5   5   6   7   7   8  
 LCS     183       L     9   10   11       E        1   2   2   3   3   3   3   3   3   4   4   4   5   5   5   5   6   7   7   8  
 LCS     184       S     9   10   11       E        2   2   2   3   3   3   3   3   3   4   4   4   5   5  18  20  22  22  25  26  
 LCS     185       A     9   10   11       E        2   2   2   3   3   3   3   3   3   4   4  18  21  23  25  26  27  28  28  29  
 LCS     186       S     9   10   11       E        2   2   2   4   8  11  14  15  17  20  22  24  25  25  25  26  28  28  28  29  
 LCS     187       L     9   10   11       E        2   2   3   5   6   9  13  15  18  19  22  23  25  25  25  26  28  28  28  29  
 LCS     188       G     9   10   11       E        2   2   2   3   3   3   3   3  12  15  18  20  21  23  25  26  27  28  28  29  
 LCS     189       L     9   10   11       E        2   2   2   3   3   3   3   3   3   4   4   5   5  15  15  17  19  20  22  23  
 LCS     190       A     9   10   11       E        1   2   2   3   3   3   3   3   3   4   4   5   5   6   6   6   7   9  18  19  
 LCS     191       Q     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     192       Q     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     193       K     5    5    7       E        0   0   1   1   1   1   1   1   1   1   2   2   2   5   5   5   6  11  12  12  
 LCS     194       T     5    5    7       E        1   1   1   1   1   1   1   1   1   3   3   4   4   5   5   5  10  11  12  12  
 LCS     195       A     5    5    7       E        1   1   1   1   1   1   1   1   1   1   3   3   4   4   5   5   6   8   9  10  
 LCS     196       V     5    5    9       E        1   1   1   1   1   1   1   1   3   4   4   4   4   5   5   5   7   7   8   9  
 LCS     197       G     5    5    9       C        1   1   1   1   1   1   2   2   3   4   4   4   4   5   5   6   7   7   8   8  
 LCS     198       G     3    7    9       C        0   0   1   1   1   2   2   2   3   3   3   4   4   4   6   6   7   8   9  10  
 LCS     199       L     5    7    9       E        0   1   1   1   1   1   2   2   3   3   3   5   5   5   6   6   7   8   9  10  
 LCS     200       A     5    7    9       E        0   1   1   1   1   1   2   2   3   3   3   4   4  15  15  17  25  26  28  28  
 LCS     201       T     5    7    9       E        0   1   1   1   1   1   2   2   3   3   3  19  21  24  25  26  28  28  28  29  
 LCS     202       D     5    7    9       E        0   1   1   5   7  10  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS     203       R     5    7    9       E        0   1   2   2   7  10  12  14  16  18  21  24  25  25  25  26  28  28  28  29  
 LCS     204       D     5    7    9       E        0   0   1   3   4   4   6   8   9  11  15  20  20  21  23  26  27  28  28  28  
 LCS     205       E     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     206       I     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     207       T     3    9   11       E        0   0   0   1   1   1   3   3   3   3   3   3   3   3   8   9  10  11  20  20  
 LCS     208       L     7    9   11       E        0   1   2   2   2   2   3   3   3   3   3   3   3   3   3   5   6  11  13  14  
 LCS     209       G     7    9   11       E        1   1   2   2   2   2   3   3   3   3   3   3   3   3   4   4   6   7   7   8  
 LCS     210       A     7    9   11       E        1   1   2   2   2   2   3   3   3   3   3   3   3   3   5   5   6   7   7   8  
 LCS     211       S     7    9   11       E        1   1   2   2   2   2   3   3   3   3   3   3   3   5   5   5   6   7   7   8  
 LCS     212       Y     7    9   11       E        1   1   2   2   2   2   3   3   3   3   3   4   4   5   5   6   6   7   7   8  
 LCS     213       N     7    9   11       C        1   1   2   2   2   2   3   3   3   3   3   3   4   6   6   6   6   7   7   8  
 LCS     214       F     7    9   11       C        0   1   2   2   2   2   3   3   3   3   3   3   3   3   3   3   4   5   7   8  
 LCS     215       G     7    9   11       C        0   1   2   2   2   2   3   3   3   3   3   3   3   3   3   4   4   7   9   9  
 LCS     216       V     4    9   11       C        0   0   1   2   2   2   3   3   3   3   3   3   3   3   3   4   4   7   9   9  
 LCS     217       A     5    7   11       C        0   1   1   2   2   2   2   2   2   2   2   3   3   3   3  20  22  22  23  24  
 LCS     218       K     5    7    9       E        1   1   1   2   2   2   2   2   2  11  19  20  21  25  25  26  27  28  28  29  
 LCS     219       L     5    7    9       E        1   1   1   2   5  11  14  15  17  20  22  24  25  25  25  26  28  28  28  29  
 LCS     220       S     5    7    9       E        1   1   1   2   6   9  13  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS     221       G     5    7    9       E        1   1   1   2   2   2   2   2  12  15  18  20  21  24  25  26  28  28  28  29  
 LCS     222       L     3    7    9       E        0   0   1   2   2   2   2   3   7   8  10  12  12  14  15  17  19  22  23  28  
 LCS     223       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     224       Q     6    9   11       C        1   1   1   2   2   3   4   6   6   9   9  11  12  13  15  17  18  18  21  22  
 LCS     225       Q     6    9   11       E        1   1   1   2   2   2   2   6   6   9   9  11  12  13  15  17  18  18  21  22  
 LCS     226       T     6    9   11       E        1   1   1   2   2   2   2   3   3   9   9  10  12  13  15  17  18  19  21  22  
 LCS     227       K     6    9   11       E        1   1   1   2   2   2   2   3   3   9   9  10  12  13  15  17  18  19  21  22  
 LCS     228       F     6    9   11       E        1   1   1   2   2   2   2   3   3   3   4   5   5  12  13  17  18  18  20  22  
 LCS     229       K     6    9   11       E        1   1   1   2   2   2   2   3   3   3   4   5   5   5   6  17  18  18  22  23  
 LCS     230       R     6    9   11       E        1   1   1   2   2   2   2   3   3   3   4   5   5   5   6   6   7   8   9  21  
 LCS     231       D     5    9   11       C        1   1   1   2   2   2   2   3   3   3   4   5   5   5   6   6   7   8  22  23  
 LCS     232       I     3    9   11       C        0   0   1   2   2   2   2   3   3   3   4   5   5   5   6   6   7   8   9  10  
 LCS     233       G     4    5   11       C        0   1   1   1   1   1   2   2   2   2   3   4   4   5   6   6   8  10  11  28  
 LCS     234       G     4    5   11       C        0   1   1   1   1   1   2   2   2   2   3   3   4   5   6   6  27  28  28  29  
 LCS     235       D     4    5    8       E        0   1   1   1   1   7  12  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS     236       I     4    5    8       E        0   2   3   3   5  11  13  15  17  20  22  24  25  25  25  26  28  28  28  29  
 LCS     237       K     3    4    8       E        0   0   0   0   1   1   1   2   9  10  17  21  23  25  25  26  27  28  28  29  
 LCS     238       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     239       N     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     240       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     241       Y     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     242       M     5    5    5       E        1   1   1   1   1   1   1   1   1   9  11  13  14  16  17  18  18  22  23  24  
 LCS     243       L     5    5    5       E        1   1   1   1   1   1   1   1   1   1   2   2   2   2   2   5   6   9   9  14  
 LCS     244       G     5    5    5       E        1   1   1   1   1   1   1   1   1   1   2   2   2   2   8   9  10  11  13  14  
 LCS     245       A     5    5    5       E        1   1   1   1   1   1   1   1   1   1   2   2   2   2   2   2   4   9   9  10  
 LCS     246       S     5    5    5       E        1   1   1   1   1   1   1   1   1   1   2   2   2   3   3   3   4   4   4   4  
 LCS     247       A     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     248       P     3    5   19       E        0   0   0   0   1   1   1   1   1   1   2   2   2   3   3   3   4   5   6   6  
 LCS     249       V     3    5   19       C        0   0   0   1   1   1   1   1   1   1   2   2   2   4   5   5   5   5   6   6  
 LCS     250       G     3    5   19       C        0   0   0   1   1   2   2   3   3   3   4   5   5   5   5   5   5   5   6   6  
 LCS     251       G     3    5   19       C        0   0   0   1   1   2   2   2   3   3   3   5   5   5   5   5   5   5   6   8  
 LCS     252       V     3    5   19       C        0   0   0   1   1   1   1   4   4   4   4   5   5   5   5   5   5   5   6   8  
 LCS     253       G     5   14   19       E        1   1   1   3   3   4   4   4   4   4   4   5   5   5   5   5   8   9   9  10  
 LCS     254       E     5   14   19       E        1   1   1   3   3   4   4   4   4   4   4   5   5   5   5   7   8   9   9  10  
 LCS     255       V     7   14   19       E        1   1   2   3   3   4   4   4   4   4   4   5   5   5   5   7   8   9   9  10  
 LCS     256       K     8   14   19       E        1   1   2   2   3   4   4   4   4   4   4   5   5   6   6   7   8   9   9  10  
 LCS     257       L     8   14   19       E        1   2   2   3   3   4   4   4   4   4   4   5   5   6   6   7   8  22  23  24  
 LCS     258       Q     8   14   19       E        1   2   2   3   3   4   4   8   9  11  13  15  16  17  18  24  25  28  28  28  
 LCS     259       Y     8   14   19       E        1   2   2   3   4   8  12  14  16  18  21  24  25  25  25  26  28  28  28  29  
 LCS     260       A     8   14   19       E        1   3   3   5   8  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS     261       L     8   14   19       E        1   2   2   3   3   4   4   9  14  16  18  21  23  25  25  26  28  28  28  29  
 LCS     262       Y     8   14   19       E        0   2   2   2   3   4   4   4   4   4   4   5  12  12  23  24  25  27  28  28  
 LCS     263       D     8   14   19       E        0   2   2   3   3   4   4   4   4   4   4   5   5   6   6   7   9   9  19  23  
 LCS     264       Q     7   14   19       E        0   1   2   3   3   4   4   4   4   4   4   5   5   6   6   7   9   9   9  19  
 LCS     265       K     7   14   19       H        0   1   2   2   3   4   4   4   4   4   4   5   5   6   6   7   9   9   9  12  
 LCS     266       A     7   14   19       H        0   1   2   3   3   4   4   4   4   4   4   5   5   6   6   6   6   7   7  12  
 LCS     267       I     3    3   19       H        0   0   0   0   0   1   1   4   4   4   4   5   5   5   6   7   9   9   9  12  
 LCS     268       D     3    3   19       C        0   0   0   0   0   1   1   1   1   2   4   4   4   4   6   7   9   9   9  12  
 LCS     269       S     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     270       K     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     271       A    13   13   13       E        1   3   3   3   3   4   4   4   4   4   4   5   6   6   7   8   8   9   9  12  
 LCS     272       H    13   13   13       E        1   3   3   3   3   4   4   4   4   4   4   5   6   6   7   8   9  17  18  19  
 LCS     273       Q    13   13   13       E        1   3   3   3   3   4   4   4   4   4   4   5   6   6   7  17  19  19  22  23  
 LCS     274       I    13   13   13       E        1   3   3   3   3   4   4   4  12  15  18  20  21  24  25  26  28  28  28  29  
 LCS     275       T    13   13   13       E        1   3   3   3   6   9  13  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS     276       L    13   13   13       E        1   3   3   3   5  11  13  15  17  20  22  24  25  25  25  26  28  28  28  29  
 LCS     277       G    13   13   13       E        1   3   3   3   3   4   4   4   4   4  13  15  16  23  24  25  27  28  28  29  
 LCS     278       Y    13   13   13       E        1   3   3   3   3   4   4   4   4   4   4   5   6   6   7  18  22  22  23  24  
 LCS     279       V    13   13   13       E        1   3   3   3   3   4   4   4   4   4   4   5   6   6   7   8   8   9   9  12  
 LCS     280       H    13   13   13       E        1   3   3   3   3   4   4   4   4   4   4   5   6   6   7   8   8   9   9   9  
 LCS     281       N    13   13   13       E        1   3   3   3   3   4   4   4   4   4   4   5   6   6   7   8   8   9   9  12  
 LCS     282       L    13   13   13       C        0   2   3   3   3   4   4   4   4   4   4   5   6   6   7   8   8   9   9  12  
 LCS     283       S    13   13   13       C        0   0   1   3   3   4   4   4   4   4   4   5   6   6   7   8   9   9   9  12  
 LCS     284       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     285       R     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     286       T     4    7    9       E        0   1   1   1   2   2   2   3   3   4   4   5   6   6   7   7   9   9   9  12  
 LCS     287       A     4    8    9       E        0   1   1   1   2   2   2   3   3   4   4   5   6   6   7   8   9   9   9  12  
 LCS     288       L     5    8    9       E        0   1   1   2   2   2   2   3   3   4   4   5   6   6   7   8   9   9   9  12  
 LCS     289       Y     5    8    9       E        0   1   1   2   2   2   2   3   3   4   4   5   6   6   7   8   9   9   9  12  
 LCS     290       G     5    8    9       C        0   1   1   2   2   2   2   2   3   4   4   4   6   6   7   8   9   9   9  12  
 LCS     291       N     5    8    9       C        1   1   1   2   2   2   2   3   3   4   4   5   6   6   7   8  22  22  23  24  
 LCS     292       L     5    8    9       E        1   1   1   2   2   2   2   2   3   4   4   4  21  23  24  25  27  28  28  29  
 LCS     293       A     5    8    9       E        1   2   3   5   8  11  14  15  17  20  22  24  25  25  25  26  28  28  28  29  
 LCS     294       F     5    8    9       E        1   1   1   2   5   9  12  15  17  20  22  24  25  25  25  26  28  28  28  29  
 LCS     295       L     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     296       K     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     297       N     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     298       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     299       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     300       A     5    6    7       C        0   1   1   1   1   1   1   3   3   3   4   5   5   5   6   6   7   8   9  10  
 LCS     301       S     5    6    7       C        0   1   1   1   1   2   2   3   3   3   4   5   5   5   7   8   8   9   9  10  
 LCS     302       T     5    6    9       C        0   1   1   1   1   1   1   3   3   3   4   5   5   6   7   8   8   9   9  10  
 LCS     303       L     5    6    9       C        0   1   1   1   1   1   1   1   1   1   2   2   3   5   6   8   8   9   9  10  
 LCS     304       G     5    6    9       C        0   0   1   1   1   2   2   3   3   3   4   5   5   5   6   6   7   8   9  10  
 LCS     305       L     5    6    9       C        0   0   1   1   1   1   2   3   3   3   3   4   5   5   5   6   7   8   8   9  
 LCS     306       Q     5    6    9       C        0   0   1   1   1   1   1   3   3   3   3   3   4   5   5   6   7   7   8   9  
 LCS     307       A     5    6    9       E        0   0   1   1   1   2   2   3   3   3   3   4   5   5   5   6   7  18  20  21  
 LCS     308       K     5    6    9       C        0   0   1   1   1   1   1   3   3   3  10  11  12  13  15  17  18  19  21  22  
 LCS     309       G     5    6    9       C        0   0   1   1   2   2   3   3   3   3   3   4   5   5   5   5  17  18  20  21  
 LCS     310       V     0    3    9       C        0   0   0   1   1   2   2   2   3   3   3   4   5   5   5  16  17  18  20  27  
 LCS     311       Y     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     312       A     3    5    5       C        0   0   0   1   1   2   2   2   3   3  10  13  15  18  18  20  21  23  25  27  
 LCS     313       G     3    5    5       C        0   0   0   1   1   1   1  10  10  11  12  14  15  18  18  21  25  27  28  28  
 LCS     314       G     3    5    5       C        0   0   0   1   1   2   2   2   4  11  12  14  15  18  18  20  21  26  28  28  
 LCS     315       V     3    5    5       C        0   0   0   1   1   4   7  11  15  17  20  22  24  25  25  26  28  28  28  29  
 LCS     316       Q     3    5    5       C        0   0   0   1   1   2   2   9  14  16  18  21  24  25  25  26  28  28  28  29  
 LCS     317       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     318       G     6    6    6       C        1   1   1   2   3   6   8  15  17  20  22  24  25  25  25  26  28  28  28  29  
 LCS     319       E     6    6    6       C        1   1   1   2   3   6   9  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS     320       S     6    6    6       E        1   1   1   2   3   6  10  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS     321       Q     6    6    6       E        1   1   1   2   3   6  12  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS     322       T     6    6    6       E        1   1   1   2   3   6  12  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS     323       G     6    6    6       E        1   1   1   2   3   6  12  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS     324       V     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     325       Q     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     326       V     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     327       G     5    6    6       E        0   4   6   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS     328       I     5    6    6       E        2   6   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS     329       R     5    6    6       E        3   6   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS     330       H     5    6    6       E        3   6   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS     331       A     5    6    6       E        3   6   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS     332       F     5    6    6       C        1   6   7   8  10  12  14  15  18  20  22  24  25  25  25  26  28  28  28  29  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   1.27 
 
 NUMBER_OF_CA_Tg:  332      NUMBER_OF_CA_Pr:  237      PERCENT_OF_CA:  71.39  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max      12      21      25      28      36      43      47      52      60      68      75      81      83      84      86      89      93      95      95      97  
 GDT PERCENT_OF_CA_Pr    5.06    8.86   10.55   11.81   15.19   18.14   19.83   21.94   25.32   28.69   31.65   34.18   35.02   35.44   36.29   37.55   39.24   40.08   40.08   40.93 
 GDT PERCENT_OF_CA_Tg    3.61    6.33    7.53    8.43   10.84   12.95   14.16   15.66   18.07   20.48   22.59   24.40   25.00   25.30   25.90   26.81   28.01   28.61   28.61   29.22 
 GDT FRAGMENT: Beg-End   3-331   3-332   3-332   3-332   3-332   3-332   3-332   3-332   3-332   3-332   3-332   3-332   3-332   3-332   3-332   3-332   3-332   3-332   3-332   3-332 
 GDT RMS_LOCAL           0.38    0.70    0.85    1.11    1.82    2.06    2.34    2.67    3.04    3.32    3.58    3.83    3.92    4.06    4.17    4.45    4.86    5.01    5.01    5.19 
 GDT RMS_ALL_CA         21.69   21.62   21.57   21.87   21.22   21.19   21.14   21.11   21.13   21.11   21.08   21.05   21.03   21.06   21.05   21.02   21.02   21.04   21.04   21.02 
 
 
 TEST (CA)  RMS =  20.88               (Number of atoms:  237) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   20.88        237    71.4   332     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0881                            CRMSCA  
     SECONDARY STRUCTURE . .   18.72        132    75.9   174     CRMSCA  
     SURFACE . . . . . . . .   22.03        136    72.7   187     CRMSCA  
     BURIED  . . . . . . . .   19.23        101    69.7   145     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   20.83        948    59.0  1606     CRMSMC  
     SECONDARY STRUCTURE . .   18.75        528    62.3   848     CRMSMC  
     SURFACE . . . . . . . .   21.89        544    59.8   910     CRMSMC  
     BURIED  . . . . . . . .   19.31        404    58.0   696     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    0.00          0     0.0  1133     CRMSSC  
     RELIABLE SIDE CHAINS  .    0.00          0     0.0   957     CRMSSC  
     SECONDARY STRUCTURE . .    0.00          0     0.0   626     CRMSSC  
     SURFACE . . . . . . . .    0.00          0     0.0   682     CRMSSC  
     BURIED  . . . . . . . .    0.00          0     0.0   451     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   20.83        948    38.5  2461     CRMSALL 
     SECONDARY STRUCTURE . .   18.75        528    39.9  1322     CRMSALL 
     SURFACE . . . . . . . .   21.89        544    38.0  1430     CRMSALL 
     BURIED  . . . . . . . .   19.31        404    39.2  1031     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   17.262      1.000       0.500    237    71.4   332     ERRCA  
     SECONDARY STRUCTURE . .   15.148      1.000       0.500    132    75.9   174     ERRCA  
     SURFACE . . . . . . . .   18.109      1.000       0.500    136    72.7   187     ERRCA  
     BURIED  . . . . . . . .   16.121      1.000       0.500    101    69.7   145     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   17.246      1.000       0.500    948    59.0  1606     ERRMC  
     SECONDARY STRUCTURE . .   15.216      1.000       0.500    528    62.3   848     ERRMC  
     SURFACE . . . . . . . .   17.989      1.000       0.500    544    59.8   910     ERRMC  
     BURIED  . . . . . . . .   16.245      1.000       0.500    404    58.0   696     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.000      0.000       0.000      0     0.0  1133     ERRSC  
     RELIABLE SIDE CHAINS  .    0.000      0.000       0.000      0     0.0   957     ERRSC  
     SECONDARY STRUCTURE . .    0.000      0.000       0.000      0     0.0   626     ERRSC  
     SURFACE . . . . . . . .    0.000      0.000       0.000      0     0.0   682     ERRSC  
     BURIED  . . . . . . . .    0.000      0.000       0.000      0     0.0   451     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   17.246      1.000       0.500    948    38.5  2461     ERRALL 
     SECONDARY STRUCTURE . .   15.216      1.000       0.500    528    39.9  1322     ERRALL 
     SURFACE . . . . . . . .   17.989      1.000       0.500    544    38.0  1430     ERRALL 
     BURIED  . . . . . . . .   16.245      1.000       0.500    404    39.2  1031     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         1         2         5        36        95     237     332   DISTCA 
CA  (P)      0.30      0.60      1.51     10.84     28.61             332   DISTCA 
CA  (RMS)    0.44      0.96      2.11      4.00      6.05                   DISTCA 
 
ALL (N)         1         7        20       141       377     948    2461   DISTALL 
ALL (P)      0.04      0.28      0.81      5.73     15.32            2461   DISTALL 
ALL (RMS)    0.44      1.56      2.26      4.06      6.06                   DISTALL 
 
 
 
 
END of the results output 
