 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
# WARNING! The number of residues in SS section: 0 0 , MODEL 0 , TARGET 185 
 
# WARNING! TARGET 1470 atoms, MODEL 359 atoms, 355 common with TARGET 
           Number of atoms possible to evaluate: 355 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   368     ARMSMC  
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   118     ARMSMC  
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   188     ARMSMC  
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   180     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   162     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   146     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    55     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    83     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    79     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   120     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    91     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    36     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    63     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    57     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    40     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    33     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    11     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    33     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     7     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    23     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    23     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0     6     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    20     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     3     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1    2 - 186  185  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    26     68 - 93       4.97    20.03 
  LCS LOCAL_SCORE:             10.49 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1    2 - 186  185  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    12     54 - 65       1.97    20.83 
  LONGEST_CONTINUOUS_SEGMENT    12     55 - 66       2.00    20.53 
  LCS LOCAL_SCORE:              3.94 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1    2 - 186  185  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     8     55 - 62       0.89    21.87 
  LCS LOCAL_SCORE:              2.30 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS       2       P     3    3   14       -        1   1   1   1   2   3   5   7  10  10  11  12  14  15  16  21  22  23  25  27  
 LCS       3       V     4    5   14       -        1   1   3   4   7   8  10  10  11  11  12  13  14  17  19  21  22  23  25  27  
 LCS       4       D     4    5   15       -        1   1   3   4   7   8  10  10  11  11  12  13  14  15  18  21  22  23  25  27  
 LCS       5       L     4    6   15       -        1   2   4   5   6   8  10  10  11  11  12  13  14  17  19  21  22  27  30  34  
 LCS       6       S     4    6   16       -        1   2   4   5   6   8  10  10  11  11  12  13  14  17  19  21  23  24  30  36  
 LCS       7       K     4    6   16       -        1   2   3   4   5   8  10  10  11  11  12  13  14  17  20  22  26  30  34  38  
 LCS       8       W     4    6   17       -        1   2   2   4   7   8  10  10  11  11  12  13  15  17  20  23  27  30  35  40  
 LCS       9       S     4    6   18       -        1   2   3   3   4   8  10  10  11  11  12  13  15  20  22  24  29  32  37  41  
 LCS      10       G     4    6   18       -        1   1   2   3   4   5   7   9  11  11  14  17  21  23  26  29  32  35  38  41  
 LCS      11       P     3    6   18       -        1   1   2   2   3   5  10  10  11  11  13  14  16  22  27  29  32  35  38  41  
 LCS      12       L     3    6   18       -        1   1   3   4   7   8  10  10  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS      13       S     3    4   18       -        1   1   4   5   6   8  10  10  11  11  12  13  15  17  27  29  31  35  38  41  
 LCS      14       L     3    4   18       -        1   1   2   2   3   5   6   9  11  11  16  19  22  24  27  29  32  35  38  41  
 LCS      15       Q     3    4   18       -        1   1   3   4   4   5   7   9  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS      16       E     3    4   18       -        1   1   1   2   3   5   7   7   8   9  11  14  16  18  19  26  30  33  37  40  
 LCS      17       V     3    5   18       -        1   1   2   2   3   5   7   9  11  11  13  14  16  20  23  29  31  35  38  41  
 LCS      18       D     4    5   18       -        1   2   2   4   4   6   7   9  11  11  13  14  16  20  26  29  31  35  38  41  
 LCS      19       E     4    5   18       -        1   2   2   4   4   6   7   9  11  11  13  15  20  24  27  29  32  35  38  41  
 LCS      20       Q     4    9   18       -        1   2   3   4   4   6   7   8  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS      21       P     4    9   18       -        1   2   3   3   4   5   7   9  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS      22       Q     3    9   18       -        1   1   3   3   4   6   7   9  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS      23       H     3    9   18       -        1   2   3   4   4   6   7   9  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS      24       P     5    9   18       -        1   2   2   3   4   5   7   9  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS      25       L     5    9   18       -        2   2   3   4   4   6   7   8  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS      26       H     5    9   18       -        2   2   3   4   4   6   7   8  10  11  13  16  21  23  26  29  32  35  38  41  
 LCS      27       V     5    9   17       -        2   2   3   4   4   6   7   8  10  11  12  14  16  18  20  23  32  34  38  41  
 LCS      28       T     5    9   17       -        2   2   3   4   4   6   7   8  10  11  12  17  20  21  24  26  28  30  31  34  
 LCS      29       Y     4    5   17       -        1   1   2   2   4   5   7   8  10  14  15  17  20  21  24  26  28  34  38  41  
 LCS      30       A     4    5   17       -        1   1   2   2   3   3   4   5   8   9  10  12  16  19  23  25  28  30  32  41  
 LCS      31       G     4    5   17       -        1   1   2   2   2   3   5   6   8   8  11  12  15  17  24  28  32  35  38  41  
 LCS      32       A     3    5   17       -        1   1   2   3   3   4   7   9  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS      33       A     3    5   17       -        1   2   2   2   3   4   6   8  11  11  13  17  20  21  24  26  29  32  37  40  
 LCS      34       V     3    7   17       -        1   2   2   3   3   4   7   8  10  11  13  17  20  21  24  26  28  30  35  38  
 LCS      35       D     5    7   17       -        1   2   2   3   3   4   7   8   9  10  11  14  16  17  20  22  23  26  30  37  
 LCS      36       E     5    7   17       -        1   2   2   3   4   4   5   7   8   9  11  12  15  17  20  21  22  23  25  28  
 LCS      37       L     5    7   17       -        1   2   2   3   3   4   5   6   8   8   9  10  15  17  24  25  28  30  31  32  
 LCS      38       G     5    7   18       -        1   2   2   3   3   4   7   9  10  14  15  17  20  21  24  26  28  30  31  32  
 LCS      39       K     5    7   18       -        1   2   2   3   3   4   5   6   8   8  11  17  20  21  24  26  28  30  31  32  
 LCS      40       V     4   10   19       -        1   2   2   4   5   7   8  10  11  11  12  13  15  21  24  26  28  30  31  32  
 LCS      41       L     4   11   19       -        1   2   2   5   7   8  10  10  11  11  12  14  15  18  21  26  28  30  31  34  
 LCS      42       T     5   11   19       -        1   2   4   5   7   8  10  10  11  11  12  14  17  24  25  27  29  32  34  36  
 LCS      43       P     6   11   19       -        2   2   4   5   7   8  10  10  11  14  17  19  22  24  27  29  31  33  34  37  
 LCS      44       T     6   11   19       -        2   2   4   5   7   8  10  10  12  15  17  19  22  24  28  29  31  33  34  36  
 LCS      45       Q     6   11   19       -        2   2   3   5   6   8  10  10  12  15  17  19  22  24  28  29  31  33  34  36  
 LCS      46       V     6   11   19       -        2   2   4   5   7   8  10  10  12  15  17  19  22  24  28  29  31  33  34  37  
 LCS      47       K     6   11   19       -        2   2   3   5   7   8  10  10  11  12  14  15  17  23  28  29  31  33  37  40  
 LCS      48       N     6   11   19       -        1   2   4   5   7   8  10  10  11  11  12  14  17  21  23  25  30  31  34  37  
 LCS      49       R     4   11   19       -        1   2   3   4   7   8  10  10  11  11  12  13  16  17  19  23  25  29  30  32  
 LCS      50       P     4   11   19       -        1   2   2   3   4   5   8   8  10  11  12  13  16  17  20  23  25  29  32  35  
 LCS      51       T     4   11   19       -        1   1   4   5   7   8  10  10  11  11  12  13  16  17  20  23  25  27  32  35  
 LCS      52       S     4    4   19       -        1   1   2   2   3   4   6   8  10  12  16  17  21  24  28  29  31  33  34  36  
 LCS      53       I     4    6   19       -        1   1   2   5   7   8  10  11  12  15  17  19  22  24  28  29  31  33  34  36  
 LCS      54       S     3   12   19       -        1   1   1   2   7   8  10  11  13  15  17  19  22  24  28  29  31  33  34  36  
 LCS      55       W     8   12   19       -        3   4   4   5   7   8  10  11  13  15  17  19  22  24  28  29  31  33  34  36  
 LCS      56       D     8   12   19       -        3   4   4   4   6   8  10  11  13  15  17  19  22  24  28  29  31  33  34  36  
 LCS      57       G     8   12   19       -        3   4   4   4   5   6   8  10  13  14  16  18  22  24  27  29  31  33  34  36  
 LCS      58       L     8   12   19       -        3   4   4   4   6   8  10  11  13  15  17  19  22  24  28  29  31  33  34  36  
 LCS      59       D     8   12   17       -        3   4   4   4   5   6   8  10  13  14  17  19  22  24  28  29  31  33  34  36  
 LCS      60       S     8   12   17       -        3   4   4   4   5   6   8  10  13  14  17  19  22  24  28  29  31  33  34  36  
 LCS      61       G     8   12   17       -        1   2   3   4   5   6   8  10  13  14  15  17  21  24  28  29  31  33  34  36  
 LCS      62       K     8   12   17       -        1   4   4   4   5   6   8  10  13  14  15  18  21  24  28  29  31  33  34  36  
 LCS      63       L     5   12   17       -        1   2   2   2   3   5   8  10  13  14  16  19  22  24  28  29  31  33  34  36  
 LCS      64       Y     3   12   17       -        3   4   4   5   7   8  10  11  13  15  17  19  22  24  28  29  31  33  34  36  
 LCS      65       T     3   12   17       -        1   2   4   5   7   8  10  11  13  15  17  19  22  24  28  29  31  33  34  37  
 LCS      66       L     4   12   17       -        1   2   3   5   7   8  10  11  13  15  17  19  22  24  28  29  31  33  37  41  
 LCS      67       V     4    8   19       -        1   2   2   3   4   5   7   8   9  11  12  16  21  24  28  29  32  35  38  41  
 LCS      68       L     5    8   26       -        1   2   2   3   4   5   7   9  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS      69       T     5    8   26       -        1   2   2   3   4   5   7   9  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS      70       D     5    8   26       -        1   2   2   3   5   7  10  10  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS      71       P     5    8   26       -        1   2   3   5   7   8  10  10  11  12  14  15  17  20  22  24  27  31  36  40  
 LCS      72       D     5    8   26       -        1   2   2   3   4   5   7   8  10  12  14  16  22  24  27  29  32  35  38  41  
 LCS      73       A     4    8   26       -        1   2   2   3   4   5   7   8  10  12  16  19  22  24  27  29  32  35  38  41  
 LCS      74       P     4    8   26       -        1   2   2   3   4   5   7   8   9  11  12  16  22  24  27  29  32  35  38  41  
 LCS      75       S     4    4   26       -        1   1   2   3   3   4   7   8  11  12  14  19  22  24  27  29  32  35  38  41  
 LCS      76       R     4    7   26       -        1   2   3   3   3   3   5   8  11  12  17  19  22  24  27  29  32  35  38  41  
 LCS      77       K     4    7   26       -        2   2   3   3   4   5   7   9  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS      78       D     4    7   26       -        2   2   3   4   4   5   6   9  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS      79       P     4    7   26       -        2   2   2   3   4   5   7   9  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS      80       K     4    7   26       -        2   2   3   3   3   5   6   7   7   9  16  19  22  24  27  29  32  35  38  41  
 LCS      81       Y     4    7   26       -        1   2   3   4   4   5   7   9  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS      82       R     4    7   26       -        1   2   3   3   4   4   6   8  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS      83       E     4    6   26       -        1   2   2   3   3   5   7   9  11  12  14  19  22  24  27  29  32  35  38  41  
 LCS      84       W     4    6   26       -        1   2   2   2   4   5   7   9  11  12  14  17  21  24  27  29  32  35  38  41  
 LCS      85       H     3    6   26       -        1   2   2   2   3   4   7   9  11  12  14  15  17  19  22  24  26  29  38  41  
 LCS      86       H     3    6   26       -        1   2   2   2   3   4   4   5   7   8  12  14  14  17  18  22  24  27  31  39  
 LCS      87       F     3    6   26       -        1   2   2   3   3   4   7   9  11  14  15  17  20  24  25  28  32  35  38  41  
 LCS      88       L     3    6   26       -        1   1   4   4   5   6   8   9  11  15  17  19  22  24  28  29  32  35  38  41  
 LCS      89       V     4   10   26       -        1   2   4   5   7   8  10  11  13  15  17  19  22  24  28  29  32  35  38  41  
 LCS      90       V     4   10   26       -        1   3   3   4   5   8  10  11  12  15  16  19  22  24  28  29  31  33  37  41  
 LCS      91       N     4   10   26       -        1   3   3   4   5   5   7   9  11  12  14  15  16  19  22  24  28  31  32  35  
 LCS      92       M     4   10   26       -        1   1   2   3   5   5   7   9  11  12  14  15  17  20  22  24  26  29  37  41  
 LCS      93       K     6   10   26       -        2   3   3   4   5   5   7   9  11  12  14  15  17  20  22  24  26  35  38  41  
 LCS      94       G     6   10   25       -        2   3   3   4   5   6   7   9  11  12  14  15  17  22  23  24  32  35  38  41  
 LCS      95       N     6   10   25       -        2   2   3   4   5   5   7   9  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS      96       D     6   10   25       -        2   3   3   4   5   5   7   9  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS      97       I     6   10   25       -        2   3   3   4   5   5   7   9  11  12  15  19  22  24  27  29  32  35  38  41  
 LCS      98       S     6   10   25       -        1   2   3   4   5   5   7   9  11  12  14  15  16  18  21  23  26  30  35  40  
 LCS      99       S     3    6   25       -        1   2   2   3   3   3   4   8  10  12  15  17  22  24  27  29  32  35  38  41  
 LCS     100       G     3    6   20       -        1   1   2   4   4   5   7   9  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS     101       T     3    6   15       -        1   2   3   4   4   5   7   9  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS     102       V     3    6   15       -        1   2   3   4   4   5   7   9  10  15  17  19  22  24  27  29  32  35  38  41  
 LCS     103       L     3    6   15       -        1   2   2   2   3   3   4   7   8   9  12  17  20  24  27  29  32  35  38  41  
 LCS     104       S     4    6   15       -        1   1   2   2   3   4   4   5   7   8   9  13  17  22  26  29  31  35  38  41  
 LCS     105       D     4    5   15       -        1   1   3   3   4   5   7   9  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS     106       Y     4    5   13       -        2   2   2   2   3   5   7   8  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS     107       V     4    7   17       -        2   2   2   3   3   5   7   9  11  12  16  19  21  24  28  29  31  33  35  40  
 LCS     108       G     4    7   17       -        2   2   4   5   7   8  10  11  12  14  16  19  22  24  28  29  31  33  34  36  
 LCS     109       S     4    7   17       -        2   2   4   5   7   8  10  11  12  14  16  19  22  24  28  29  31  33  34  36  
 LCS     110       G     4    7   17       -        2   2   2   4   6   8  10  11  12  15  16  19  22  24  28  29  31  33  34  36  
 LCS     111       P     4    7   17       -        2   2   3   4   7   8  10  10  12  15  17  19  22  24  28  29  31  33  34  36  
 LCS     112       P     4    7   17       -        2   2   3   5   5   7   8  10  12  15  16  19  22  24  28  29  31  33  34  36  
 LCS     113       K     4    7   17       -        2   2   2   2   3   5   7  10  12  15  16  19  22  24  28  29  31  33  34  36  
 LCS     114       G     4    7   17       -        2   2   2   2   3   4   5   8   8  10  12  15  17  19  22  28  30  33  34  36  
 LCS     115       T     4    7   17       -        2   2   2   2   3   4   5   7   8  10  11  13  17  20  24  27  29  33  34  36  
 LCS     116       G     4    7   17       -        1   2   2   2   3   4   5   8   8  10  11  12  14  15  18  22  25  33  34  36  
 LCS     117       L     4    7   17       -        1   2   2   2   3   4   4   8   8  10  11  13  17  19  22  23  31  33  34  36  
 LCS     118       H     4    7   17       -        1   1   2   2   3   4   5   7   9  13  16  18  22  24  28  29  31  33  34  36  
 LCS     119       R     3    7   17       -        1   1   2   2   3   4   5   7   9  12  16  18  22  24  28  29  31  33  34  36  
 LCS     120       Y     3    5   17       -        1   1   1   2   3   4   5   8  10  15  17  19  22  24  28  29  31  33  34  36  
 LCS     121       V     3    4   18       -        1   2   2   2   3   5   7   9  13  15  17  19  22  24  28  29  31  33  34  36  
 LCS     122       W     3    4   18       -        1   1   1   4   5   6   8  10  13  15  17  19  22  24  28  29  31  33  34  36  
 LCS     123       L     3    4   18       -        1   1   2   2   2   5   7   9  11  14  15  18  22  24  28  29  31  33  34  36  
 LCS     124       V     3    5   18       -        1   1   2   3   3   4   7  10  13  15  17  19  22  24  28  29  31  33  34  36  
 LCS     125       Y     4    5   18       -        1   2   2   2   3   4   6   7   8   9  11  14  17  20  23  26  28  30  32  35  
 LCS     126       E     4    5   18       -        1   2   2   2   3   4   4   7   8   9  11  11  13  15  16  18  22  23  27  30  
 LCS     127       Q     4    8   18       -        1   2   2   3   3   4   5   7   8   9  11  11  14  15  16  18  20  22  23  26  
 LCS     128       D     4    8   18       -        1   2   2   3   3   4   4   7   8   9  11  11  14  15  16  18  20  21  23  25  
 LCS     129       R     4    8   18       -        1   2   2   3   3   4   6   7   8   9  10  11  14  15  16  18  20  20  23  24  
 LCS     130       P     5    8   18       -        1   2   2   3   3   4   4   6   8   9   9  11  14  15  16  18  20  21  22  25  
 LCS     131       L     5    8   18       -        1   2   2   3   3   4   4   7   8   9   9  11  15  16  17  23  24  28  30  34  
 LCS     132       K     5    8   18       -        1   2   2   3   4   5   7   8   9  11  12  14  16  17  20  23  28  34  38  41  
 LCS     133       C     5    8   18       -        1   2   2   3   3   4   6   8  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS     134       D     5    8   18       -        1   2   3   4   4   5   7   9  11  15  17  19  22  24  27  29  32  35  38  41  
 LCS     135       E     3    4   18       -        1   2   3   3   4   5   7   9  10  15  17  19  22  24  27  29  32  35  38  41  
 LCS     136       P     3    4   18       -        1   1   2   3   4   5   7   9  10  15  17  19  22  24  27  29  32  35  38  41  
 LCS     137       I     4    5   18       -        2   2   2   2   2   3   4   6   8   9  13  17  20  24  27  29  32  35  38  41  
 LCS     138       L     4    5   18       -        2   2   2   2   2   3   4   6   7   8   9  11  14  18  20  24  28  29  32  39  
 LCS     139       S     4    7   18       -        2   2   2   2   3   3   4   7   8   9  11  13  15  17  20  22  25  28  30  34  
 LCS     140       N     4    8   16       -        2   2   2   3   4   4   6   7   8   9  11  12  15  18  20  24  28  29  30  34  
 LCS     141       R     5    8   16       -        1   2   2   3   4   4   6   7   8   9  11  12  15  15  17  21  22  26  28  31  
 LCS     142       S     5    8   18       -        1   2   2   3   4   4   6   7   8   9  11  13  15  16  19  22  24  26  29  34  
 LCS     143       G     5    8   20       -        1   2   2   3   4   4   6   7   8   9  11  11  14  16  20  24  28  30  32  35  
 LCS     144       D     5    8   20       -        1   2   2   3   4   8   9  10  12  14  16  17  21  23  27  28  30  32  34  36  
 LCS     145       H     5    8   20       -        1   2   3   4   7   8  10  11  13  15  16  19  22  24  28  29  31  33  34  36  
 LCS     146       R     5    8   20       -        1   2   3   4   6   7   9  10  13  15  17  19  22  24  28  29  31  33  34  36  
 LCS     147       G     5    8   20       -        1   2   3   3   4   5   7   9  11  14  16  18  21  24  25  28  29  32  34  35  
 LCS     148       K     5    7   20       -        1   2   3   3   4   5   7   7   8  11  13  16  18  21  22  24  27  30  31  32  
 LCS     149       F     5    7   20       -        1   2   3   3   4   5   7   9  11  14  17  19  22  24  28  29  31  33  34  36  
 LCS     150       K     5    7   20       -        1   2   3   3   4   5   7   7   8   9  13  16  21  24  25  28  31  33  34  36  
 LCS     151       V     5    7   20       -        1   2   3   3   4   5   7   9  11  14  17  19  22  24  28  29  31  35  38  41  
 LCS     152       A     5    7   20       -        1   2   3   3   4   6   7   9  11  12  17  19  22  24  28  29  32  35  38  41  
 LCS     153       S     3    4   20       -        1   2   3   4   7   8  10  11  12  15  17  19  22  24  28  29  31  35  38  41  
 LCS     154       F     4    4   20       -        1   2   3   5   6   8  10  11  13  15  17  19  22  24  28  29  32  35  38  41  
 LCS     155       R     4    4   20       -        1   2   3   5   7   8  10  11  13  15  17  19  22  24  28  29  32  35  38  41  
 LCS     156       K     4    6   20       -        1   2   3   5   6   8  10  11  13  15  17  19  22  24  28  29  32  35  38  41  
 LCS     157       K     4    7   20       -        1   2   3   3   4   5   7  10  13  15  17  19  22  24  27  29  32  35  38  41  
 LCS     158       Y     4    7   20       -        1   1   2   3   4   5   7   8   9  11  16  19  22  24  27  29  32  35  38  41  
 LCS     159       E     4    7   20       -        1   1   2   3   4   5   6   9  13  14  15  17  20  21  24  26  28  30  35  40  
 LCS     160       L     4    7   20       -        1   2   2   3   3   5   8  10  13  14  16  19  22  24  28  29  31  33  34  37  
 LCS     161       R     4    7   20       -        1   2   2   3   7   8  10  11  12  15  17  19  22  24  28  29  31  33  34  36  
 LCS     162       A     4    7   20       -        1   2   4   5   7   8  10  11  12  15  17  19  22  24  28  29  31  33  34  36  
 LCS     163       P     4    7   20       -        1   2   2   3   4   5   7  10  12  15  16  19  22  24  28  29  31  33  34  36  
 LCS     164       V     3    5   20       -        1   2   4   5   7   8  10  11  12  15  17  19  22  24  28  29  31  33  34  36  
 LCS     165       A     3    4   19       -        1   1   1   2   4   6   9  11  12  15  17  19  22  24  28  29  31  33  34  36  
 LCS     166       G     4    6   18       -        0   2   4   5   7   8  10  11  12  15  17  19  22  24  28  29  31  33  34  36  
 LCS     167       T     4    6   19       -        1   2   3   3   4   5   7   8   8  11  14  19  22  24  28  29  31  33  34  36  
 LCS     168       C     4    6   19       -        1   2   2   2   4   4   7   8   8   9  11  12  16  17  21  23  26  30  32  36  
 LCS     169       Y     4    6   19       -        1   2   2   2   2   3   4   5   7   8   9  10  16  16  17  19  20  23  26  29  
 LCS     170       Q     4    7   19       -        1   2   2   2   3   4   5   5   7   8   9  10  12  14  17  18  19  22  23  25  
 LCS     171       A     4    7   19       -        1   2   2   2   3   4   5   5   7   7   8  10  12  14  15  17  18  20  21  25  
 LCS     172       E     4    7   19       -        1   2   2   2   3   4   5   5   7   7   8  10  12  14  15  17  18  20  21  23  
 LCS     173       W     4    7   19       -        1   2   2   2   3   4   5   5   6   7   8  10  12  14  15  17  18  20  21  23  
 LCS     174       D     4    7   19       -        1   2   2   2   3   4   5   5   6   7   8  10  12  14  15  17  18  20  21  24  
 LCS     175       D     4    7   19       -        1   2   2   2   3   4   5   5   6   7   8  10  12  14  15  17  18  20  21  23  
 LCS     176       Y     3    7   19       -        1   1   2   2   2   4   4   4   4   7   8  10  11  13  15  17  18  20  21  23  
 LCS     177       V     4    6   19       -        1   2   2   2   3   4   5   5   6   7   8  10  12  14  15  17  18  20  21  24  
 LCS     178       P     4    6   19       -        1   2   2   2   3   4   4   5   6   7   8   9  11  12  15  17  18  20  21  24  
 LCS     179       K     4    6   19       -        1   2   2   2   3   4   5   5   6   7   8   8  11  12  15  17  23  26  30  40  
 LCS     180       L     4    6   19       -        1   2   2   2   3   4   5   5   6   7   8  10  12  14  15  17  23  35  38  41  
 LCS     181       Y     3    6   19       -        1   1   2   2   3   4   5   5   6   7   8   8  11  15  22  29  32  35  38  41  
 LCS     182       E     3    6   19       -        1   1   2   2   3   4   5   5   6   7   8   8  13  15  22  29  32  35  38  41  
 LCS     183       Q     3    4   19       -        1   1   2   2   2   3   4   4   7   7   8  10  13  15  17  26  31  35  38  41  
 LCS     184       L     3    4   19       -        1   1   1   2   3   3   4   5   7   9  11  14  16  20  22  28  31  33  37  41  
 LCS     185       S     3    4   19       -        1   1   1   1   2   3   4   5   6   7  10  12  12  17  17  20  20  21  24  27  
 LCS     186       G     3    4   17       -        1   1   1   1   2   3   4   5   6   9  10  14  16  17  17  20  21  22  24  28  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   2.30 
 
 NUMBER_OF_CA_Tg:  185      NUMBER_OF_CA_Pr:  185      PERCENT_OF_CA: 100.00  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max       6       8       8      11      14      16      19      21      25      28      33      36      42      46      53      55      60      66      71      77  
 GDT PERCENT_OF_CA_Pr    3.24    4.32    4.32    5.95    7.57    8.65   10.27   11.35   13.51   15.14   17.84   19.46   22.70   24.86   28.65   29.73   32.43   35.68   38.38   41.62 
 GDT PERCENT_OF_CA_Tg    3.24    4.32    4.32    5.95    7.57    8.65   10.27   11.35   13.51   15.14   17.84   19.46   22.70   24.86   28.65   29.73   32.43   35.68   38.38   41.62 
 GDT FRAGMENT: Beg-End  55-60   55-64   55-64    5-48    3-71   53-166   3-71   53-166  54-160  44-166  43-166  44-166  12-158  44-167  44-167  43-167  10-182  10-183  10-183   9-184 
 GDT RMS_LOCAL           0.36    0.52    0.52    1.40    1.96    2.05    2.38    2.60    3.44    3.47    4.25    4.14    4.84    4.90    5.41    5.50    6.10    6.38    6.67    7.01 
 GDT RMS_ALL_CA         22.28   22.14   22.14   21.71   22.69   20.05   22.77   20.20   19.62   19.50   19.20   19.65   17.52   19.44   19.47   19.51   17.76   17.87   17.87   17.94 
 
 
 TEST (CA)  RMS =  16.30               (Number of atoms:  185) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   16.30        185   100.0   185     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0881                            CRMSCA  
     SECONDARY STRUCTURE . .   14.54         59   100.0    59     CRMSCA  
     SURFACE . . . . . . . .   17.94         95   100.0    95     CRMSCA  
     BURIED  . . . . . . . .   14.35         90   100.0    90     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   16.28        355    39.0   910     CRMSMC  
     SECONDARY STRUCTURE . .   14.70        117    39.8   294     CRMSMC  
     SURFACE . . . . . . . .   17.97        181    38.8   466     CRMSMC  
     BURIED  . . . . . . . .   14.31        174    39.2   444     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   16.26        170    23.3   730     CRMSSC  
     RELIABLE SIDE CHAINS  .   16.26        170    27.7   614     CRMSSC  
     SECONDARY STRUCTURE . .   14.87         58    22.1   262     CRMSSC  
     SURFACE . . . . . . . .   18.00         86    23.8   361     CRMSSC  
     BURIED  . . . . . . . .   14.26         84    22.8   369     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   16.28        355    24.1  1470     CRMSALL 
     SECONDARY STRUCTURE . .   14.70        117    23.5   498     CRMSALL 
     SURFACE . . . . . . . .   17.97        181    24.4   741     CRMSALL 
     BURIED  . . . . . . . .   14.31        174    23.9   729     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    6.300      0.228       0.141    185   100.0   185     ERRCA  
     SECONDARY STRUCTURE . .    4.637      0.178       0.100     59   100.0    59     ERRCA  
     SURFACE . . . . . . . .    7.609      0.255       0.149     95   100.0    95     ERRCA  
     BURIED  . . . . . . . .    4.917      0.199       0.132     90   100.0    90     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    6.274      0.227       0.139    355    39.0   910     ERRMC  
     SECONDARY STRUCTURE . .    4.751      0.180       0.100    117    39.8   294     ERRMC  
     SURFACE . . . . . . . .    7.530      0.251       0.143    181    38.8   466     ERRMC  
     BURIED  . . . . . . . .    4.968      0.203       0.135    174    39.2   444     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    6.247      0.227       0.137    170    23.3   730     ERRSC  
     RELIABLE SIDE CHAINS  .    6.247      0.227       0.137    170    27.7   614     ERRSC  
     SECONDARY STRUCTURE . .    4.867      0.182       0.100     58    22.1   262     ERRSC  
     SURFACE . . . . . . . .    7.443      0.247       0.137     86    23.8   361     ERRSC  
     BURIED  . . . . . . . .    5.023      0.206       0.138     84    22.8   369     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    6.274      0.227       0.139    355    24.1  1470     ERRALL 
     SECONDARY STRUCTURE . .    4.751      0.180       0.100    117    23.5   498     ERRALL 
     SURFACE . . . . . . . .    7.530      0.251       0.143    181    24.4   741     ERRALL 
     BURIED  . . . . . . . .    4.968      0.203       0.135    174    23.9   729     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         0         2        10        53     185     185   DISTCA 
CA  (P)      0.00      0.00      1.08      5.41     28.65             185   DISTCA 
CA  (RMS)    0.00      0.00      2.47      3.87      7.66                   DISTCA 
 
ALL (N)         0         0         3        17        94     355    1470   DISTALL 
ALL (P)      0.00      0.00      0.20      1.16      6.39            1470   DISTALL 
ALL (RMS)    0.00      0.00      2.49      3.84      7.53                   DISTALL 
 
 
 
 
END of the results output 
