 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
# WARNING! The number of residues in SS section: 0 0 , MODEL 0 , TARGET 135 
 
# WARNING! TARGET 1057 atoms, MODEL 146 atoms, 143 common with TARGET 
           Number of atoms possible to evaluate: 134 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   268     ARMSMC  
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   146     ARMSMC  
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   184     ARMSMC  
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    84     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   115     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    96     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    69     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    79     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    36     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    83     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    75     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    47     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    60     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    23     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    43     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    39     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    25     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    40     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     3     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    21     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    21     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    11     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    20     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     1     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1    4 - 137  134  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    22    100 - 121      4.97    26.85 
  LCS LOCAL_SCORE:             12.63 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1    4 - 137  134  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     8    104 - 111      1.71    24.25 
  LCS LOCAL_SCORE:              4.24 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1    4 - 137  134  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5     42 - 46       0.99    30.95 
  LONGEST_CONTINUOUS_SEGMENT     5    105 - 109      0.74    22.02 
  LONGEST_CONTINUOUS_SEGMENT     5    114 - 118      0.56    28.02 
  LCS LOCAL_SCORE:              2.65 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS       4       K     3    4    8       -        0   2   2   2   3   4   4   5   5   5   5   7   8   9  10  10  16  17  19  19  
 LCS       5       W     3    5    8       -        2   2   2   2   3   4   4   5   5   5   5   7   8   9  10  15  16  17  19  22  
 LCS       6       V     3    5   20       -        2   2   2   2   3   4   4   5   5   5  11  13  15  16  19  22  25  34  37  39  
 LCS       7       M     3    5   20       -        2   2   2   2   2   4   4   5   5   5  10  13  15  17  22  28  31  34  37  39  
 LCS       8       S     3    5   20       -        2   2   2   2   4   7   9  13  15  17  21  23  25  27  28  30  32  34  37  39  
 LCS       9       T     4    5   20       -        2   2   3   3   5   8  10  13  15  17  21  23  25  27  28  30  32  34  37  39  
 LCS      10       K     4    5   20       -        2   2   5   5   7   8  10  13  15  17  21  23  25  27  28  30  32  34  37  39  
 LCS      11       Y     4    7   20       -        0   2   2   4   6   8  10  13  15  17  21  23  25  27  28  30  32  34  37  39  
 LCS      12       V     4    7   20       -        2   2   5   5   7   8  10  13  15  17  21  23  25  27  28  30  32  34  37  39  
 LCS      13       E     3    7   20       -        2   2   3   5   6   8  10  11  14  16  21  23  25  27  28  30  32  34  37  39  
 LCS      14       A     3    7   20       -        2   2   3   5   6   8  10  11  15  17  21  23  25  27  28  30  32  34  37  39  
 LCS      15       G     3    7   20       -        2   2   3   5   6   8  10  11  14  16  21  23  25  27  28  30  32  34  37  39  
 LCS      16       E     3    7   20       -        2   2   2   5   7   8  10  13  15  17  21  23  25  27  28  30  32  34  37  39  
 LCS      17       L     3    7   20       -        2   2   5   5   7   8  10  13  15  17  21  23  25  27  28  30  32  34  37  39  
 LCS      18       K     4    6   20       -        2   2   5   5   7   8  10  13  15  17  21  23  25  27  28  30  32  34  37  39  
 LCS      19       E     4    6   20       -        2   2   2   3   4   5   9  12  15  17  21  23  25  27  28  30  32  34  37  39  
 LCS      20       G     4    6   20       -        2   2   2   3   4   5   9  12  13  16  20  23  25  27  28  30  32  34  37  39  
 LCS      21       S     4    6   20       -        2   2   5   5   7   8  10  13  15  17  21  23  25  27  28  30  32  34  37  39  
 LCS      22       Y     3    6   20       -        2   2   3   3   5   6   9  12  15  17  21  23  25  27  28  30  32  34  37  39  
 LCS      23       V     3    6   20       -        0   2   3   5   7   8  10  13  15  17  21  23  25  27  28  30  32  34  37  39  
 LCS      24       V     3    4   20       -        0   2   2   2   3   4   5   8  11  14  18  22  25  27  28  30  32  34  35  37  
 LCS      25       I     3    5   20       -        2   2   2   3   5   7   8   9  12  16  18  22  25  27  28  30  32  34  35  37  
 LCS      26       D     3    5   20       -        2   2   2   2   3   7   7   7   9  10  11  13  17  20  25  28  32  34  34  37  
 LCS      27       G     3    5   18       -        2   2   2   2   5   7   7   8   9  10  14  17  17  24  27  30  32  34  35  37  
 LCS      28       E     3    5   18       -        2   2   2   2   4   7   7   7   9  10  14  17  17  22  27  30  32  34  35  37  
 LCS      29       P     3    5   18       -        2   2   2   3   5   7   7   8   9  11  12  14  19  23  27  30  31  34  35  37  
 LCS      30       C     3    5   18       -        2   2   2   2   5   7   7   8  10  13  17  20  25  27  28  30  32  34  35  37  
 LCS      31       R     3    5   18       -        0   2   2   3   5   7   7   8   9  11  12  14  17  23  27  30  31  34  37  39  
 LCS      32       V     3    6   18       -        2   2   3   4   5   7   8  10  12  14  15  17  20  25  28  30  32  34  37  39  
 LCS      33       V     3    6   18       -        2   2   2   3   5   6   6  11  11  13  15  19  22  27  28  30  32  34  37  39  
 LCS      34       E     4    6   18       -        2   2   2   4   5   6   8  11  11  16  18  22  25  27  28  30  32  34  37  39  
 LCS      35       I     4    6   18       -        0   2   2   4   5   8  10  11  14  16  20  23  25  27  28  30  32  34  35  37  
 LCS      36       E     4    6   18       -        0   2   2   5   6   8  10  11  15  17  21  23  25  27  28  30  32  34  35  37  
 LCS      37       K     4    6   18       -        0   2   3   4   5   6   9  13  15  17  21  23  25  27  28  30  32  34  35  37  
 LCS      38       S     4    6   18       -        0   2   4   5   7   8  10  13  15  17  21  23  25  27  28  30  32  34  35  37  
 LCS      39       K     4    6   18       -        2   2   2   4   5   6   9  13  14  17  21  23  25  27  28  30  32  34  35  37  
 LCS      40       T     4    5   18       -        2   2   5   5   7   8  10  13  15  17  21  23  25  27  28  30  32  34  35  37  
 LCS      41       G     4    5   18       -        2   2   5   5   7   8  10  13  15  17  21  23  25  27  28  30  32  34  35  37  
 LCS      42       K     5    7   18       -        2   2   3   3   4   5   5   8  11  15  17  19  25  27  28  30  32  34  35  37  
 LCS      43       H     5    7   18       -        2   2   3   3   4   5   5   8  12  15  17  22  25  26  28  30  32  34  35  37  
 LCS      44       G     5    7   18       -        2   2   3   3   4   5   6  11  14  17  21  23  25  27  28  30  32  34  35  37  
 LCS      45       S     5    7   18       -        0   2   3   3   4   5   9  11  14  16  21  23  25  27  28  30  32  34  35  37  
 LCS      46       A     5    7   18       -        0   2   3   3   4   5   8   9  14  17  21  23  25  27  28  30  32  34  35  37  
 LCS      47       K     4    7   18       -        0   2   2   3   4   5   8  11  14  16  19  20  22  24  28  30  32  34  35  37  
 LCS      48       A     4    7   18       -        2   2   2   3   4   5   8  11  14  16  21  23  25  27  28  30  32  34  35  37  
 LCS      49       R     4    5   18       -        2   2   2   2   4   8  10  11  12  16  19  23  25  27  28  30  32  34  35  37  
 LCS      50       I     4    5   18       -        2   2   2   5   6   8  10  13  15  17  21  23  25  27  28  30  32  34  35  37  
 LCS      51       V     3    5   18       -        0   2   2   3   4   5   8  10  12  15  17  19  22  24  28  30  32  33  34  36  
 LCS      52       A     3    5   18       -        0   2   2   3   4   5   8  10  11  12  14  19  20  22  25  30  31  34  37  39  
 LCS      53       V     3    5   12       -        0   2   2   3   4   5   5   7  11  11  13  15  18  20  22  27  30  34  37  39  
 LCS      54       G     3    5   12       -        2   2   2   2   4   5   5   7  11  11  13  15  17  20  22  27  30  34  37  39  
 LCS      55       V     3    6   12       -        2   2   2   2   5   5   8   8  10  11  13  15  17  20  22  27  30  34  37  39  
 LCS      56       F     4    6   12       -        2   2   2   3   3   5   5   8  10  11  13  14  17  19  22  27  30  34  37  39  
 LCS      57       D     4    6   12       -        2   2   2   3   5   5   8   8  11  11  13  15  17  20  22  27  30  34  37  39  
 LCS      58       G     4    6   12       -        2   2   2   3   5   6   8   8  10  11  13  14  16  17  19  21  22  25  26  35  
 LCS      59       G     4    6   16       -        2   2   2   3   5   6   8   8  10  11  13  14  16  18  20  23  25  25  26  35  
 LCS      60       K     4    6   16       -        2   2   2   3   5   6   8   8  10  11  13  14  16  18  20  23  25  25  26  28  
 LCS      61       R     3    5   16       -        2   2   2   2   3   5   5   6   8   9  12  14  16  18  22  27  29  34  37  39  
 LCS      62       T     3    6   16       -        0   2   2   3   5   5   6   7   8   9  11  14  16  18  20  23  28  32  37  39  
 LCS      63       L     3    6   16       -        0   2   2   3   5   5   6   9  11  14  17  19  21  22  24  27  30  34  37  39  
 LCS      64       S     3    6   16       -        0   2   2   3   5   5   6   8   8  11  12  18  20  22  22  24  30  34  37  39  
 LCS      65       L     3    6   16       -        0   2   2   3   6   8  10  11  14  15  19  20  22  25  28  30  32  34  34  36  
 LCS      66       P     3    6   16       -        2   2   2   3   5   5   8  11  14  17  21  23  25  27  28  30  32  34  35  37  
 LCS      67       V     3    7   16       -        2   2   3   4   5   5   9  13  15  17  21  23  25  27  28  30  32  34  35  37  
 LCS      68       D     3    7   16       -        2   2   3   4   5   5   8  12  12  16  18  21  25  27  28  30  32  34  35  37  
 LCS      69       A     3    7   16       -        2   2   3   3   5   5   8  13  15  17  21  23  25  27  28  30  32  34  35  37  
 LCS      70       Q     4    7   16       -        1   2   3   4   5   5   8  11  11  12  14  14  16  20  24  28  28  32  35  37  
 LCS      71       V     4    7   16       -        1   2   3   4   5   5   8   9   9  10  13  14  16  17  21  23  28  31  34  36  
 LCS      72       E     4    7   16       -        0   2   3   4   5   5   8   9   9  10  11  11  12  13  14  17  18  21  25  27  
 LCS      73       V     4    7   16       -        0   2   3   4   5   5   8   9   9  10  11  11  12  13  14  17  19  21  25  27  
 LCS      74       P     4    5   16       -        2   2   2   3   3   5   6   7   8   9  11  12  14  17  21  24  27  29  32  37  
 LCS      75       I     4    5   16       -        2   2   2   4   4   4   6   7   8   9  10  11  13  16  21  25  29  31  34  37  
 LCS      76       I     4    5    9       -        2   2   2   4   4   4   6   7  10  12  16  17  18  20  23  25  29  32  37  38  
 LCS      77       E     3    4   14       -        2   2   2   4   6  11  13  14  15  16  17  20  22  22  24  26  29  32  34  37  
 LCS      78       K     3    4   14       -        2   2   2   4   4   4   9   9  11  13  17  17  22  22  24  26  28  31  34  37  
 LCS      79       F     3    4   14       -        0   2   2   4   5   8   9   9  11  15  17  20  22  22  24  26  28  32  34  37  
 LCS      80       T     3    4   14       -        0   2   2   2   2   3   5   5   7  10  15  20  22  22  24  26  28  30  31  37  
 LCS      81       A     3    5   14       -        0   2   2   2   6   7   9  11  13  17  19  20  22  22  23  26  28  29  31  34  
 LCS      82       Q     3    5   14       -        2   2   2   2   6   8   9  11  13  17  19  20  22  22  23  26  28  28  31  34  
 LCS      83       I     3    5   14       -        2   2   2   5   6   9  11  14  15  17  19  20  22  22  23  26  28  28  31  34  
 LCS      84       L     3    5   14       -        2   3   5   7   9  11  12  14  15  17  19  20  22  22  23  26  28  28  31  34  
 LCS      85       S     3    5   14       -        2   2   2   5   6   9  12  14  15  17  19  20  22  22  23  25  26  28  31  34  
 LCS      86       V     3    5   14       -        0   2   2   2   4   4   5   7   9  10  14  19  21  22  23  25  25  28  31  33  
 LCS      87       S     3    5   14       -        2   2   2   2   4   4   5   7   8  10  11  13  14  17  19  22  24  28  28  31  
 LCS      88       G     3    5   14       -        2   2   2   2   3   4   5   6   6   7   8   9  17  18  19  21  23  24  27  28  
 LCS      89       D     3    5   14       -        2   2   2   2   4   4   5   7   8  10  11  13  14  17  21  22  24  28  28  31  
 LCS      90       V     3    5   14       -        2   2   2   2   4   4   5   8   8   9  13  16  18  20  22  24  25  28  31  33  
 LCS      91       I     3    4   14       -        0   2   2   5   6   8  11  14  15  16  19  20  22  22  23  26  28  30  33  37  
 LCS      92       Q     3    4   14       -        2   4   5   7   8  11  13  14  15  17  19  20  22  22  24  26  29  32  34  37  
 LCS      93       L     3    4   14       -        2   2   3   7   8  11  13  14  15  17  19  20  22  22  24  26  29  32  34  37  
 LCS      94       M     3    5   14       -        2   2   2   2   4   5   6   8   9  12  16  17  20  22  24  26  29  32  34  37  
 LCS      95       D     3    5   14       -        2   2   2   2   2   4   7   8  10  11  13  16  20  22  24  26  29  32  37  39  
 LCS      96       M     4    6   12       -        2   2   3   3   3   5   8   8  10  11  14  16  20  22  24  26  29  32  34  37  
 LCS      97       R     4    6   12       -        2   2   3   3   4   5   7   8   9  10  12  13  15  19  22  25  28  32  37  38  
 LCS      98       D     4    6   12       -        2   2   3   3   4   5   6   8   9  10  11  13  15  17  21  25  28  32  37  38  
 LCS      99       Y     4    6   21       -        2   2   3   3   4   5   6   8   9  10  12  13  15  22  24  26  28  32  34  37  
 LCS     100       K     3    6   22       -        2   2   3   3   4   7   8  10  11  17  18  20  22  22  24  26  29  32  34  37  
 LCS     101       T     4    6   22       -        0   2   2   2   4   5   8  10  14  17  18  20  22  22  23  26  28  32  34  37  
 LCS     102       I     4    5   22       -        0   2   2   7   8   9  12  14  15  17  19  20  22  22  24  26  29  32  36  38  
 LCS     103       E     4    5   22       -        0   2   2   3   6   9  11  14  15  17  19  20  22  22  24  27  30  34  37  39  
 LCS     104       V     4    8   22       -        0   2   5   8  10  11  13  14  15  17  19  20  22  22  24  27  30  34  37  39  
 LCS     105       P     5    8   22       -        2   4   5   8  10  11  13  14  15  17  19  20  22  22  24  26  29  32  37  39  
 LCS     106       M     5    8   22       -        3   3   5   8  10  11  13  14  15  17  19  20  22  22  24  26  29  32  37  39  
 LCS     107       K     5    8   22       -        3   4   5   8  10  11  13  14  15  17  19  20  22  22  24  27  30  34  37  39  
 LCS     108       Y     5    8   22       -        3   4   5   8  10  11  13  14  15  17  19  20  22  22  24  27  30  34  37  39  
 LCS     109       V     5    8   22       -        3   4   5   8  10  11  13  14  15  17  19  20  22  22  24  27  30  34  37  39  
 LCS     110       E     4    8   22       -        2   2   3   5   6   8  11  14  15  17  19  20  22  22  24  27  30  34  37  39  
 LCS     111       E     4    8   22       -        3   4   5   8  10  11  13  14  15  17  19  20  22  22  24  27  30  34  37  39  
 LCS     112       E     4    6   22       -        2   2   3   5   8  11  13  14  15  17  19  20  22  22  24  27  30  34  37  39  
 LCS     113       A     4    6   22       -        2   3   5   8  10  11  13  14  15  17  19  20  22  22  24  27  30  34  37  39  
 LCS     114       K     5    6   22       -        2   3   3   5   5   6   8  11  15  17  19  20  22  22  24  26  30  34  37  39  
 LCS     115       G     5    6   22       -        2   3   5   8  10  11  13  14  15  17  19  20  22  22  24  26  29  32  36  39  
 LCS     116       R     5    6   22       -        2   3   5   8  10  11  13  14  15  17  19  20  22  22  24  26  29  32  34  37  
 LCS     117       L     5    6   22       -        2   3   4   8  10  11  13  14  15  17  19  20  22  22  24  26  29  32  34  37  
 LCS     118       A     5    6   22       -        2   3   3   5  10  11  13  14  15  17  19  20  22  22  24  26  28  32  34  37  
 LCS     119       P     4    6   22       -        2   2   2   3   4   4   6  12  14  15  17  17  20  22  24  26  29  32  34  37  
 LCS     120       G     4    6   22       -        2   2   2   3   4   4   6   7   8   9  10  12  15  17  21  25  29  32  34  37  
 LCS     121       A     4    6   22       -        2   2   2   3   4   5   6   8   9  10  11  13  17  22  24  25  29  32  34  37  
 LCS     122       E     3    6   16       -        0   2   2   3   4   5   6   8   9  10  12  13  15  17  22  25  29  32  37  39  
 LCS     123       V     3    5   16       -        0   2   2   2   3   5   8   8  10  11  12  15  17  20  23  26  30  34  37  39  
 LCS     124       E     3    4   16       -        0   2   2   2   4   5   8   8  10  11  12  13  17  19  22  27  30  34  37  39  
 LCS     125       V     3    4   12       -        0   2   2   3   4   5   8   8  10  11  13  14  17  20  22  27  30  34  37  39  
 LCS     126       W     3    4   12       -        0   2   2   3   4   5   8   8  10  11  12  14  17  19  22  27  30  34  37  39  
 LCS     127       Q     3    4   12       -        0   2   2   3   4   5   6   7   8   9  12  14  17  19  22  27  30  34  37  39  
 LCS     128       I     3    5   12       -        2   2   2   3   4   6   8   8  10  11  12  14  16  17  22  26  30  34  37  39  
 LCS     129       L     3    5   12       -        2   2   2   2   3   4   5   7   9  11  13  14  16  17  19  21  24  25  28  31  
 LCS     130       D     3    5   12       -        2   2   2   2   5   6   8   8  10  11  13  14  16  17  19  21  24  26  28  31  
 LCS     131       R     3    5   12       -        2   2   2   2   5   6   8   8  10  11  13  14  16  17  19  23  25  28  33  35  
 LCS     132       Y     3    5   12       -        0   2   2   2   5   6   8   8  10  11  14  17  17  19  22  25  29  32  34  38  
 LCS     133       K     3    5   12       -        2   2   2   3   5   6   8   8  10  11  14  15  17  19  22  25  29  32  34  36  
 LCS     134       I     3    5   12       -        2   2   2   2   5   6   8   8  11  13  14  17  18  21  22  25  29  32  34  37  
 LCS     135       I     3    4   12       -        2   2   5   6   7  11  11  13  15  16  19  20  22  22  24  26  29  32  37  39  
 LCS     136       R     3    4   12       -        2   2   5   8  10  11  13  14  15  17  19  20  22  22  24  26  29  32  34  37  
 LCS     137       V     0    4   12       -        0   2   5   8  10  11  13  14  15  17  19  20  22  22  24  26  29  32  34  37  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   2.61 
 
 NUMBER_OF_CA_Tg:  135      NUMBER_OF_CA_Pr:  134      PERCENT_OF_CA:  99.26  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max       5       6       8      12      14      15      18      20      21      24      29      32      35      37      39      41      44      47      51      53  
 GDT PERCENT_OF_CA_Pr    3.73    4.48    5.97    8.96   10.45   11.19   13.43   14.93   15.67   17.91   21.64   23.88   26.12   27.61   29.10   30.60   32.84   35.07   38.06   39.55 
 GDT PERCENT_OF_CA_Tg    3.70    4.44    5.93    8.89   10.37   11.11   13.33   14.81   15.56   17.78   21.48   23.70   25.93   27.41   28.89   30.37   32.59   34.81   37.78   39.26 
 GDT FRAGMENT: Beg-End 106-111  92-111  92-135 104-137 104-137 104-137  77-137  84-137  83-137  82-136   8-69    8-69    8-69    8-69    8-69    8-69    8-69    6-128   6-135   6-135 
 GDT RMS_LOCAL           0.38    0.70    0.93    1.50    1.75    1.88    2.43    2.71    2.84    3.61    4.08    4.33    4.61    4.86    4.96    5.18    5.48    6.85    7.13    7.25 
 GDT RMS_ALL_CA         23.13   20.80   21.11   25.57   26.13   26.02   24.67   27.73   27.80   27.91   22.71   22.64   23.20   22.90   23.27   23.10   22.66   16.59   16.65   16.63 
 
 
 TEST (CA)  RMS =  15.23               (Number of atoms:  134) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   15.23        134    99.3   135     CRMSCA  
     CRN = ALL/NP  . . . . .    0.1136                            CRMSCA  
     SECONDARY STRUCTURE . .   14.71         73   100.0    73     CRMSCA  
     SURFACE . . . . . . . .   15.94         92    98.9    93     CRMSCA  
     BURIED  . . . . . . . .   13.53         42   100.0    42     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   15.23        134    20.2   664     CRMSMC  
     SECONDARY STRUCTURE . .   14.71         73    20.1   364     CRMSMC  
     SURFACE . . . . . . . .   15.94         92    20.2   455     CRMSMC  
     BURIED  . . . . . . . .   13.53         42    20.1   209     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    0.00          0     0.0   517     CRMSSC  
     RELIABLE SIDE CHAINS  .    0.00          0     0.0   453     CRMSSC  
     SECONDARY STRUCTURE . .    0.00          0     0.0   305     CRMSSC  
     SURFACE . . . . . . . .    0.00          0     0.0   362     CRMSSC  
     BURIED  . . . . . . . .    0.00          0     0.0   155     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   15.23        134    12.7  1057     CRMSALL 
     SECONDARY STRUCTURE . .   14.71         73    12.2   597     CRMSALL 
     SURFACE . . . . . . . .   15.94         92    12.5   734     CRMSALL 
     BURIED  . . . . . . . .   13.53         42    13.0   323     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.374      0.202       0.115    134    99.3   135     ERRCA  
     SECONDARY STRUCTURE . .    4.983      0.192       0.106     73   100.0    73     ERRCA  
     SURFACE . . . . . . . .    5.866      0.213       0.118     92    98.9    93     ERRCA  
     BURIED  . . . . . . . .    4.297      0.179       0.111     42   100.0    42     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.374      0.202       0.115    134    20.2   664     ERRMC  
     SECONDARY STRUCTURE . .    4.983      0.192       0.106     73    20.1   364     ERRMC  
     SURFACE . . . . . . . .    5.866      0.213       0.118     92    20.2   455     ERRMC  
     BURIED  . . . . . . . .    4.297      0.179       0.111     42    20.1   209     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.000      0.000       0.000      0     0.0   517     ERRSC  
     RELIABLE SIDE CHAINS  .    0.000      0.000       0.000      0     0.0   453     ERRSC  
     SECONDARY STRUCTURE . .    0.000      0.000       0.000      0     0.0   305     ERRSC  
     SURFACE . . . . . . . .    0.000      0.000       0.000      0     0.0   362     ERRSC  
     BURIED  . . . . . . . .    0.000      0.000       0.000      0     0.0   155     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.374      0.202       0.115    134    12.7  1057     ERRALL 
     SECONDARY STRUCTURE . .    4.983      0.192       0.106     73    12.2   597     ERRALL 
     SURFACE . . . . . . . .    5.866      0.213       0.118     92    12.5   734     ERRALL 
     BURIED  . . . . . . . .    4.297      0.179       0.111     42    13.0   323     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         0         0         2        29     134     135   DISTCA 
CA  (P)      0.00      0.00      0.00      1.48     21.48             135   DISTCA 
CA  (RMS)    0.00      0.00      0.00      4.07      7.69                   DISTCA 
 
ALL (N)         0         0         0         2        29     134    1057   DISTALL 
ALL (P)      0.00      0.00      0.00      0.19      2.74            1057   DISTALL 
ALL (RMS)    0.00      0.00      0.00      4.07      7.69                   DISTALL 
 
 
 
 
END of the results output 
