 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
# WARNING! The number of residues in SS section: 0 0 , MODEL 0 , TARGET 135 
 
# WARNING! TARGET 1057 atoms, MODEL 146 atoms, 143 common with TARGET 
           Number of atoms possible to evaluate: 134 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   268     ARMSMC  
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   146     ARMSMC  
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   184     ARMSMC  
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    84     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   115     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    96     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    69     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    79     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    36     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    83     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    75     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    47     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    60     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    23     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    43     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    39     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    25     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    40     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     3     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    21     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    21     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    11     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    20     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     1     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1    4 - 137  134  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    26     93 - 118      4.76    32.08 
  LCS LOCAL_SCORE:             13.44 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1    4 - 137  134  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    11     63 - 73       1.68    21.67 
  LCS LOCAL_SCORE:              4.72 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1    4 - 137  134  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6     94 - 99       0.76    33.53 
  LCS LOCAL_SCORE:              2.90 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS       4       K     3    4    8       -        0   2   2   2   2   3   3   3   3   4   5   5   6   7  15  20  22  26  33  40  
 LCS       5       W     3    5    9       -        0   2   2   2   2   3   3   4   7   8  10  11  16  18  20  22  30  31  34  40  
 LCS       6       V     3    5   13       -        1   2   2   2   3   3   3   5   7   8  10  11  16  18  20  28  30  31  35  40  
 LCS       7       M     3    5   15       -        2   2   2   2   3   3   3   5   7   8  10  13  16  22  25  28  30  32  35  40  
 LCS       8       S     3    5   16       -        2   2   2   2   3   4   6   8   8  10  15  19  20  22  25  28  30  32  35  40  
 LCS       9       T     3    5   16       -        2   2   2   4   5   6   8   9  11  13  15  19  20  22  25  28  30  32  35  40  
 LCS      10       K     3    5   16       -        2   2   2   4   5   6   8   9  11  13  15  19  20  22  25  28  30  32  35  40  
 LCS      11       Y     4    5   16       -        0   2   2   3   5   6   8   9  11  13  15  19  20  22  25  28  30  32  35  40  
 LCS      12       V     4    5   16       -        0   2   2   3   5   5   8   9  11  13  15  19  20  22  25  28  30  32  35  40  
 LCS      13       E     4    5   16       -        2   2   2   3   5   6   8   9  11  13  15  19  20  22  25  28  30  32  35  40  
 LCS      14       A     5    5   16       -        2   3   3   3   4   5   8   9  11  13  15  19  20  22  25  28  30  32  35  40  
 LCS      15       G     5    5   16       -        2   3   3   3   5   6   8   8  11  13  15  19  20  22  25  28  30  32  35  40  
 LCS      16       E     5    5   16       -        2   3   3   3   5   5   6   7   8  11  14  16  20  22  25  28  30  32  35  40  
 LCS      17       L     5    6   16       -        2   3   3   3   5   5   6   7   8  12  14  16  20  22  25  28  30  32  35  40  
 LCS      18       K     5    7   16       -        2   3   3   5   5   5   7   8   9  12  14  15  17  17  21  22  25  30  33  35  
 LCS      19       E     5    7   16       -        2   2   3   5   5   5   8   9  10  12  14  14  17  17  20  22  25  29  31  34  
 LCS      20       G     5    7   16       -        2   2   3   5   5   5   7   9  10  12  14  15  17  17  20  22  24  28  28  31  
 LCS      21       S     5    7   16       -        2   2   3   5   5   5   8   9  10  12  14  15  17  17  21  22  26  30  33  40  
 LCS      22       Y     5    7   16       -        2   2   3   5   5   5   8   9  10  12  15  19  20  22  25  28  30  32  35  40  
 LCS      23       V     5    7   16       -        0   2   3   5   5   6   8   9  11  13  15  19  20  22  25  28  30  32  35  40  
 LCS      24       V     3    7   15       -        0   2   2   2   4   4   5   9  11  13  15  19  20  22  25  28  30  32  35  40  
 LCS      25       I     3    8   15       -        2   2   3   4   5   6   8   9  11  13  15  19  20  22  25  28  30  32  35  40  
 LCS      26       D     4    8   15       -        2   2   3   3   5   6   8   9  11  13  15  19  20  22  25  28  30  32  35  40  
 LCS      27       G     4    8   15       -        2   2   3   4   5   6   6   8   8  14  14  16  17  20  22  25  30  32  35  40  
 LCS      28       E     4    8   15       -        2   2   3   4   5   6   6   8   8  11  11  14  17  19  22  25  28  32  35  40  
 LCS      29       P     4    8   15       -        2   2   3   4   5   6   6   8   8  14  14  16  17  19  20  22  23  26  33  40  
 LCS      30       C     3    8   15       -        2   2   3   5   5   6   8   9  11  14  15  19  20  22  25  28  30  32  35  40  
 LCS      31       R     3    8   15       -        0   2   3   5   5   6   8   9  11  14  14  19  20  22  25  28  30  32  35  40  
 LCS      32       V     3    8   15       -        2   2   2   4   5   6   8   9  11  13  15  19  20  22  25  28  30  32  35  40  
 LCS      33       V     3    5   15       -        2   2   2   2   3   4   7   8  10  11  15  19  20  22  25  28  30  32  35  40  
 LCS      34       E     3    5   15       -        2   2   3   3   3   5   7   8  11  13  15  19  20  22  25  28  30  32  35  40  
 LCS      35       I     3    5   17       -        0   2   2   2   3   5   6   9  11  14  16  18  18  20  22  23  27  30  34  37  
 LCS      36       E     3    6   17       -        0   2   2   2   4   5   7   8  12  14  17  18  18  20  20  22  25  26  28  33  
 LCS      37       K     3    6   17       -        0   2   3   3   4   5   7   8  12  14  17  18  18  20  20  22  25  26  27  28  
 LCS      38       S     4    6   17       -        0   2   3   3   5   5   7  10  12  14  17  18  18  20  20  22  25  26  27  28  
 LCS      39       K     4    6   17       -        2   2   3   3   4   5   8  11  12  14  17  18  18  20  20  22  25  26  27  28  
 LCS      40       T     4    6   17       -        2   2   3   3   4   5   8  11  12  14  17  18  18  20  20  22  25  26  27  28  
 LCS      41       G     4    6   17       -        2   2   3   3   4   5   7   9  12  14  16  18  18  20  20  22  23  25  26  28  
 LCS      42       K     3    5   17       -        2   2   2   2   4   5   7   9  10  11  12  14  17  20  20  20  21  24  26  28  
 LCS      43       H     4    5   17       -        2   2   2   2   2   5   5   5   5  11  11  11  14  14  15  17  18  22  22  23  
 LCS      44       G     4    5   17       -        2   2   2   2   4   5   7   8  10  11  11  11  14  14  18  22  22  24  26  28  
 LCS      45       S     4    6   17       -        0   2   2   2   4   5   7   8  10  11  12  14  17  20  20  22  23  25  26  28  
 LCS      46       A     4    6   17       -        0   2   2   2   4   5   7   8  10  11  12  14  17  19  20  22  23  25  26  28  
 LCS      47       K     4    6   17       -        0   3   5   7   8   9   9  11  12  14  17  18  18  20  20  22  25  26  27  28  
 LCS      48       A     4    6   17       -        2   3   5   7   8   9   9  11  12  14  17  18  18  20  20  22  25  26  27  28  
 LCS      49       R     4    6   17       -        2   2   2   2   5   6   8  11  12  14  17  18  18  20  20  22  25  26  27  28  
 LCS      50       I     4    6   17       -        2   2   2   3   7   8   8  11  12  14  17  18  18  20  20  22  24  26  27  28  
 LCS      51       V     3    5   17       -        0   2   2   2   5   5   6   7   8  14  17  18  18  20  20  21  23  24  26  28  
 LCS      52       A     3    5   17       -        0   2   2   2   3   5   5   7  10  14  17  18  18  20  20  24  25  29  33  37  
 LCS      53       V     3    5   12       -        0   2   2   2   3   3   4   4   8  12  14  15  17  17  20  21  25  28  28  28  
 LCS      54       G     3    5   12       -        2   2   2   5   5   5   5   7   8  12  14  15  17  17  20  21  24  28  28  33  
 LCS      55       V     3    5   12       -        2   2   2   2   3   3   5   7   8  12  14  15  17  17  21  22  24  28  35  40  
 LCS      56       F     3    5   12       -        2   2   2   3   5   5   5   8  10  12  14  15  17  17  21  22  24  28  29  31  
 LCS      57       D     3    4   12       -        2   2   2   2   3   3   5   6   8  12  14  15  17  17  21  22  24  28  28  31  
 LCS      58       G     3    5   12       -        2   2   2   2   3   4   5   8  10  12  14  14  17  17  21  22  22  25  25  28  
 LCS      59       G     4    5   12       -        2   2   2   3   3   4   5   8  10  11  14  15  17  17  20  20  22  28  28  28  
 LCS      60       K     4    5   17       -        2   2   2   3   3   3   5   6   6  10  14  15  17  17  20  21  24  28  28  28  
 LCS      61       R     4    5   17       -        2   2   2   3   3   3   5   6   8  10  14  15  17  17  20  22  25  28  28  28  
 LCS      62       T     4   10   17       -        0   2   2   4   7   8   9  10  11  11  12  13  15  17  20  22  25  28  28  28  
 LCS      63       L     4   11   17       -        0   2   2   5   8   9   9  11  12  14  17  18  18  20  20  22  25  28  28  28  
 LCS      64       S     4   11   17       -        0   2   4   5   7   9   9  10  12  14  17  18  18  20  20  22  25  28  28  28  
 LCS      65       L     4   11   17       -        0   2   5   7   8   9   9  11  12  14  17  18  18  20  20  22  25  26  27  28  
 LCS      66       P     4   11   17       -        2   3   5   7   8   9   9  11  12  14  17  18  18  20  20  22  25  26  27  28  
 LCS      67       V     5   11   17       -        2   3   5   7   8   9   9  11  12  14  17  18  18  20  20  22  25  26  27  28  
 LCS      68       D     5   11   17       -        2   2   5   7   8   9   9  11  12  14  17  18  18  20  20  22  25  26  27  28  
 LCS      69       A     5   11   17       -        2   2   4   6   8   9   9  11  12  14  17  18  18  20  20  22  25  26  27  28  
 LCS      70       Q     5   11   17       -        2   3   5   7   8   9   9  11  12  14  17  18  18  20  20  22  25  26  27  28  
 LCS      71       V     5   11   17       -        2   3   5   7   8   9   9  11  12  14  17  18  18  20  20  22  25  26  27  28  
 LCS      72       E     4   11   17       -        0   2   5   7   8   9   9  11  12  14  17  18  18  20  20  22  25  26  27  28  
 LCS      73       V     4   11   17       -        0   3   5   7   8   9   9  11  12  14  17  18  18  20  20  22  25  26  27  28  
 LCS      74       P     3    5   17       -        2   2   2   2   3   6   9  10  11  14  17  18  18  20  21  22  25  26  27  31  
 LCS      75       I     4    5   17       -        2   2   2   2   4   5   5   6   7  13  14  18  20  22  25  28  30  31  34  40  
 LCS      76       I     4    5   17       -        2   2   3   4   5   6   8   9  11  13  15  19  20  22  25  28  30  32  35  40  
 LCS      77       E     4    4   19       -        2   2   3   4   5   6   8   9  11  13  15  19  20  22  25  28  30  32  35  40  
 LCS      78       K     4    4   19       -        0   2   2   2   3   4   5   7   8  11  11  13  15  20  23  25  30  32  35  40  
 LCS      79       F     3    4   19       -        0   2   2   2   4   5   5   6   8  10  13  13  16  19  20  25  28  32  35  40  
 LCS      80       T     4    6   19       -        0   2   2   4   5   6   7   8  11  14  14  16  17  19  20  21  24  31  35  40  
 LCS      81       A     4    6   19       -        2   3   4   5   5   6   8   9  11  14  14  16  17  19  20  23  24  26  31  37  
 LCS      82       Q     4    6   19       -        2   2   3   5   5   8   9  11  16  17  17  19  20  21  22  22  24  25  25  27  
 LCS      83       I     4    6   19       -        2   2   2   4   7  10  13  15  16  17  19  19  20  21  22  23  24  26  29  31  
 LCS      84       L     4    7   19       -        2   2   2   3   5   8  10  12  16  17  19  19  20  21  22  22  24  26  29  31  
 LCS      85       S     4    7   19       -        2   2   2   3   4   5   7   8  11  12  13  14  17  18  21  23  24  26  29  31  
 LCS      86       V     5    7   19       -        0   3   4   5   5   6   7   8   8  11  11  13  14  17  20  23  24  26  29  31  
 LCS      87       S     5    7   19       -        2   3   4   5   5   6   7   8   8  11  11  13  14  16  20  23  24  26  29  31  
 LCS      88       G     5    7   19       -        2   2   4   5   5   6   7   8   8  11  11  13  14  16  17  23  24  26  28  30  
 LCS      89       D     5    7   19       -        2   3   4   5   5   6   7   8   8  11  11  13  14  16  17  20  24  25  28  30  
 LCS      90       V     5    7   19       -        2   3   4   5   5   6   7   8  11  12  13  14  14  16  20  23  24  26  29  31  
 LCS      91       I     4    5   19       -        2   2   2   2   3   6   6   8  11  12  13  14  15  17  20  23  24  26  29  31  
 LCS      92       Q     4    5   19       -        2   2   2   2   3   4   5   8  11  12  13  14  16  17  20  23  24  26  29  31  
 LCS      93       L     4    7   26       -        2   2   2   3   5   8  10  12  15  17  19  19  20  21  22  23  24  26  29  31  
 LCS      94       M     6    8   26       -        2   4   5   5   8  10  13  15  16  17  19  19  20  21  22  23  24  26  29  31  
 LCS      95       D     6    8   26       -        2   4   5   6   8  10  13  15  16  17  19  19  20  21  22  23  24  26  29  31  
 LCS      96       M     6    8   26       -        2   4   5   6   8  10  13  15  16  17  19  19  20  21  22  22  24  26  29  31  
 LCS      97       R     6    8   26       -        2   4   5   6   8  10  13  15  16  17  19  19  20  21  22  22  24  26  29  31  
 LCS      98       D     6    8   26       -        2   4   5   6   8  10  13  15  16  17  19  19  20  21  22  23  24  26  29  31  
 LCS      99       Y     6    8   26       -        2   4   5   6   8  10  13  15  16  17  19  19  20  21  22  23  24  26  29  31  
 LCS     100       K     3    8   26       -        2   2   3   6   8  10  13  15  16  17  19  19  20  21  22  23  24  26  33  36  
 LCS     101       T     3    8   26       -        0   2   2   4   6   8  12  15  16  17  19  19  20  21  22  25  28  32  35  40  
 LCS     102       I     3    5   26       -        0   2   3   4   8  10  13  15  16  17  19  19  20  21  22  25  30  32  35  40  
 LCS     103       E     3    5   26       -        0   2   3   5   7  10  13  15  16  17  19  19  20  21  25  28  30  32  35  40  
 LCS     104       V     3    5   26       -        0   2   3   5   5  10  13  15  16  17  19  19  20  22  25  28  30  32  35  40  
 LCS     105       P     3    4   26       -        2   2   2   5   5   6   8   9  11  14  14  17  20  21  25  28  30  32  35  40  
 LCS     106       M     3    4   26       -        2   2   2   3   3   6   6   8  11  12  13  16  17  20  21  25  28  32  35  40  
 LCS     107       K     3    4   26       -        2   2   2   5   5   6   8   9  11  14  14  19  20  22  25  28  30  32  35  40  
 LCS     108       Y     4    4   26       -        2   2   2   3   4   6   8  11  11  17  19  19  20  22  25  28  30  32  35  40  
 LCS     109       V     4    4   26       -        2   2   2   4   5   7  11  15  16  17  19  19  20  22  25  28  30  32  35  40  
 LCS     110       E     4    4   26       -        2   2   3   4   5  10  13  15  16  17  19  19  20  22  25  28  30  32  35  40  
 LCS     111       E     4    6   26       -        2   2   3   5   7  10  13  15  16  17  19  19  20  22  25  28  30  32  35  40  
 LCS     112       E     4    6   26       -        2   2   2   3   4   6   8   9  11  14  15  19  20  22  25  28  30  32  35  40  
 LCS     113       A     4    6   26       -        2   2   3   3   5   8  12  15  16  17  19  19  20  21  22  25  30  32  35  40  
 LCS     114       K     4    6   26       -        2   2   4   6   8  10  13  15  16  17  19  19  20  21  22  22  24  27  35  40  
 LCS     115       G     4    6   26       -        2   2   3   6   8  10  13  15  16  17  19  19  20  21  22  22  24  26  29  31  
 LCS     116       R     4    6   26       -        2   4   5   6   8  10  13  15  16  17  19  19  20  21  22  23  24  26  29  31  
 LCS     117       L     3    7   26       -        2   2   5   6   8  10  13  15  16  17  19  19  20  21  22  23  24  26  29  31  
 LCS     118       A     5    7   26       -        2   2   4   4   5   8  10  13  15  17  19  19  20  21  21  23  24  26  29  31  
 LCS     119       P     5    7   20       -        2   2   4   4   4   5   7   8  10  12  13  14  17  17  21  23  24  26  29  31  
 LCS     120       G     5    7   20       -        2   2   4   4   4   5   5   8  10  11  13  14  17  17  21  23  24  26  29  31  
 LCS     121       A     5    7   20       -        2   2   4   4   4   5   7   8  10  11  14  15  19  21  21  23  24  26  29  31  
 LCS     122       E     5    7   20       -        0   2   4   4   4   5   7   8  10  12  14  15  19  21  21  23  24  26  29  31  
 LCS     123       V     5    7   20       -        0   2   4   6   8  10  13  15  16  17  19  19  20  21  22  23  24  28  29  31  
 LCS     124       E     3    5   18       -        0   2   2   3   5   8  11  15  16  17  19  19  20  21  22  22  24  28  29  31  
 LCS     125       V     3    5   18       -        0   2   2   3   4   5   6   9  11  13  14  17  20  21  22  22  24  28  29  31  
 LCS     126       W     3    5   16       -        0   2   2   3   3   5   6   8   8  11  14  16  17  20  22  28  30  32  35  40  
 LCS     127       Q     3    5   16       -        0   2   2   3   3   4   5   7   8  12  14  19  20  22  25  28  30  32  35  40  
 LCS     128       I     3    6   12       -        2   2   2   3   5   5   8   9  10  12  14  15  20  22  25  28  30  32  35  40  
 LCS     129       L     3    6   12       -        2   2   2   3   5   5   8   9  10  12  14  15  17  17  20  22  25  29  30  32  
 LCS     130       D     3    6   12       -        2   2   2   3   5   5   8   9  10  12  14  15  17  17  20  22  25  29  30  32  
 LCS     131       R     3    6   12       -        2   2   2   3   5   5   8   9  10  12  14  15  17  17  20  21  24  29  30  32  
 LCS     132       Y     3    6   12       -        0   2   2   3   5   5   8   9  10  10  12  12  14  17  20  22  25  30  34  40  
 LCS     133       K     3    6   12       -        2   2   2   3   5   5   8   9  10  10  12  12  14  17  21  22  24  29  34  37  
 LCS     134       I     3    5   12       -        2   2   2   2   3   5   5   7   8  11  13  14  17  17  21  23  24  30  35  40  
 LCS     135       I     3    4   12       -        2   2   2   4   5   6   8   9  11  14  14  16  19  22  25  28  30  32  35  40  
 LCS     136       R     3    4   12       -        2   2   2   4   5   6   8   8  11  13  14  16  18  19  22  26  30  32  35  40  
 LCS     137       V     0    4   12       -        0   0   2   2   4   5   6   9  11  13  15  17  19  20  22  23  24  26  28  29  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   2.85 
 
 NUMBER_OF_CA_Tg:  135      NUMBER_OF_CA_Pr:  134      PERCENT_OF_CA:  99.26  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max       4       6       8      10      12      14      18      21      22      23      26      26      28      30      34      38      41      44      48      55  
 GDT PERCENT_OF_CA_Pr    2.99    4.48    5.97    7.46    8.96   10.45   13.43   15.67   16.42   17.16   19.40   19.40   20.90   22.39   25.37   28.36   30.60   32.84   35.82   41.04 
 GDT PERCENT_OF_CA_Tg    2.96    4.44    5.93    7.41    8.89   10.37   13.33   15.56   16.30   17.04   19.26   19.26   20.74   22.22   25.19   28.15   30.37   32.59   35.56   40.74 
 GDT FRAGMENT: Beg-End  14-17   94-99   94-117  47-73   95-123  83-123  83-123  83-124  83-124  83-124  83-124  83-124   8-127   8-128   7-135   6-135   5-136   7-136   6-136   4-136 
 GDT RMS_LOCAL           0.42    0.76    0.99    1.33    1.94    2.23    2.60    2.92    3.00    3.18    3.54    3.54    4.85    5.07    5.52    5.92    6.20    6.59    6.93    7.41 
 GDT RMS_ALL_CA         19.91   33.53   32.16   22.12   32.47   32.44   32.41   32.06   31.96   32.05   32.15   32.15   16.23   16.41   16.57   16.59   16.59   16.35   16.39   16.44 
 
 
 TEST (CA)  RMS =  14.61               (Number of atoms:  134) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   14.61        134    99.3   135     CRMSCA  
     CRN = ALL/NP  . . . . .    0.1090                            CRMSCA  
     SECONDARY STRUCTURE . .   13.76         73   100.0    73     CRMSCA  
     SURFACE . . . . . . . .   15.51         92    98.9    93     CRMSCA  
     BURIED  . . . . . . . .   12.41         42   100.0    42     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   14.61        134    20.2   664     CRMSMC  
     SECONDARY STRUCTURE . .   13.76         73    20.1   364     CRMSMC  
     SURFACE . . . . . . . .   15.51         92    20.2   455     CRMSMC  
     BURIED  . . . . . . . .   12.41         42    20.1   209     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    0.00          0     0.0   517     CRMSSC  
     RELIABLE SIDE CHAINS  .    0.00          0     0.0   453     CRMSSC  
     SECONDARY STRUCTURE . .    0.00          0     0.0   305     CRMSSC  
     SURFACE . . . . . . . .    0.00          0     0.0   362     CRMSSC  
     BURIED  . . . . . . . .    0.00          0     0.0   155     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   14.61        134    12.7  1057     CRMSALL 
     SECONDARY STRUCTURE . .   13.76         73    12.2   597     CRMSALL 
     SURFACE . . . . . . . .   15.51         92    12.5   734     CRMSALL 
     BURIED  . . . . . . . .   12.41         42    13.0   323     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    4.870      0.189       0.108    134    99.3   135     ERRCA  
     SECONDARY STRUCTURE . .    4.063      0.163       0.093     73   100.0    73     ERRCA  
     SURFACE . . . . . . . .    5.694      0.216       0.123     92    98.9    93     ERRCA  
     BURIED  . . . . . . . .    3.064      0.131       0.075     42   100.0    42     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    4.870      0.189       0.108    134    20.2   664     ERRMC  
     SECONDARY STRUCTURE . .    4.063      0.163       0.093     73    20.1   364     ERRMC  
     SURFACE . . . . . . . .    5.694      0.216       0.123     92    20.2   455     ERRMC  
     BURIED  . . . . . . . .    3.064      0.131       0.075     42    20.1   209     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.000      0.000       0.000      0     0.0   517     ERRSC  
     RELIABLE SIDE CHAINS  .    0.000      0.000       0.000      0     0.0   453     ERRSC  
     SECONDARY STRUCTURE . .    0.000      0.000       0.000      0     0.0   305     ERRSC  
     SURFACE . . . . . . . .    0.000      0.000       0.000      0     0.0   362     ERRSC  
     BURIED  . . . . . . . .    0.000      0.000       0.000      0     0.0   155     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    4.870      0.189       0.108    134    12.7  1057     ERRALL 
     SECONDARY STRUCTURE . .    4.063      0.163       0.093     73    12.2   597     ERRALL 
     SURFACE . . . . . . . .    5.694      0.216       0.123     92    12.5   734     ERRALL 
     BURIED  . . . . . . . .    3.064      0.131       0.075     42    13.0   323     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         0         1         2        32     134     135   DISTCA 
CA  (P)      0.00      0.00      0.74      1.48     23.70             135   DISTCA 
CA  (RMS)    0.00      0.00      2.76      3.12      7.97                   DISTCA 
 
ALL (N)         0         0         1         2        32     134    1057   DISTALL 
ALL (P)      0.00      0.00      0.09      0.19      3.03            1057   DISTALL 
ALL (RMS)    0.00      0.00      2.76      3.12      7.97                   DISTALL 
 
 
 
 
END of the results output 
