 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
# WARNING! The number of residues in SS section: 102 , MODEL 102 , TARGET 117 
#          The number of residues possible to evaluate: 102 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP     1     P     C     C             1.00 
 SSP     2     F     E     E             1.00 
 SSP     3     L     E     E             1.00 
 SSP     4     E     E     E             1.00 
 SSP     5     L     E     E             1.00 
 SSP     6     D     E     E             1.00 
 SSP     7     T     E     E             1.00 
 SSP     8     N     C     C             1.00 
 SSP     9     L     C     C             1.00 
 SSP    10     P     C     C             1.00 
 SSP    11     A     H     H             1.00 
 SSP    12     N     H     H             1.00 
 SSP    13     R     H     H             1.00 
 SSP    14     V     C     C             1.00 
 SSP    15     P     C     C             1.00 
 SSP    16     A     C     C             1.00 
 SSP    17     G     C     C             1.00 
 SSP    18     L     H     H             1.00 
 SSP    19     E     H     H             1.00 
 SSP    20     K     H     H             1.00 
 SSP    21     R     H     H             1.00 
 SSP    22     L     H     H             1.00 
 SSP    23     C     H     H             1.00 
 SSP    24     A     H     H             1.00 
 SSP    25     A     H     H             1.00 
 SSP    26     A     H     H             1.00 
 SSP    27     A     H     H             1.00 
 SSP    28     S     H     H             1.00 
 SSP    29     I     H     H             1.00 
 SSP    30     L     H     H             1.00 
 SSP    31     G     C     C             1.00 
 SSP    32     K     C     C             1.00 
 SSP    33     P     C     C             1.00 
 SSP    34     A     H     H             1.00 
 SSP    35     D     H     H             1.00 
 SSP    36     R     H     H             1.00 
 SSP    37     V     C     C             1.00 
 SSP    38     N     E     E             1.00 
 SSP    39     V     E     E             1.00 
 SSP    40     T     E     E             1.00 
 SSP    41     V     E     E             1.00 
 SSP    42     R     E     E             1.00 
 SSP    43     P     C     C             1.00 
 SSP    44     G     C     C             1.00 
 SSP    45     L     C     C             1.00 
 SSP    46     A     C     C             1.00 
 SSP    47     M     C     C             1.00 
 SSP    48     A     C     C             1.00 
 SSP    49     L     E     C             1.00 
 SSP    50     S     C     C             1.00 
 SSP    51     G     C     C             1.00 
 SSP    52     S     E     C             1.00 
 SSP    53     T     C     C             1.00 
 SSP    54     E     C     C             1.00 
 SSP    55     P     C     C             1.00 
 SSP    56     C     C     C             1.00 
 SSP    57     A     E     E             1.00 
 SSP    58     Q     E     E             1.00 
 SSP    59     L     E     E             1.00 
 SSP    60     S     E     E             1.00 
 SSP    61     I     E     E             1.00 
 SSP    62     S     E     E             1.00 
 SSP    63     S     E     E             1.00 
 SSP    64     I     E     C             1.00 
 SSP    65     G     C     C             1.00 
 SSP    66     V     C     C             1.00 
 SSP    67     V     C     C             1.00 
 SSP    68     G     C     C             1.00 
 SSP    69     T     C     C             1.00 
 SSP    70     A     H     C             1.00 
 SSP    71     E     H     C             1.00 
 SSP    72     D     H     H             1.00 
 SSP    73     N     H     H             1.00 
 SSP    74     R     H     H             1.00 
 SSP    75     S     H     H             1.00 
 SSP    76     H     H     H             1.00 
 SSP    77     S     H     H             1.00 
 SSP    78     A     H     H             1.00 
 SSP    79     H     H     H             1.00 
 SSP    80     F     H     H             1.00 
 SSP    81     F     H     H             1.00 
 SSP    82     E     H     H             1.00 
 SSP    83     F     H     H             1.00 
 SSP    84     L     H     H             1.00 
 SSP    85     T     H     H             1.00 
 SSP    86     K     H     H             1.00 
 SSP    87     E     H     H             1.00 
 SSP    88     L     H     C             1.00 
 SSP    89     A     C     C             1.00 
 SSP    90     L     C     C             1.00 
 SSP    91     G     C     C             1.00 
 SSP    92     Q     H     H             1.00 
 SSP    93     D     H     H             1.00 
 SSP    94     R     H     H             1.00 
 SSP    95     I     E     E             1.00 
 SSP    96     L     E     E             1.00 
 SSP    97     I     E     E             1.00 
 SSP    98     R     E     E             1.00 
 SSP    99     F     E     E             1.00 
 SSP   100     F     E     E             1.00 
 SSP   101     P     E     E             1.00 
 SSP   102     L     E     C             1.00 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              93.1      92.7     86.2    100.0     87.2 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        91.5     100.0     93.1     79.3     87.2 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG            9             100.0               0.0 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00     102    100.0     93.1 
 
 BIN  0.00 - 1.00      1.00     102    100.0     93.1 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
 
 CONSIDERED - explicitly provided contacts (with positive confidence) or 
              non contacts (with negative confidence) possible to evaluate 
 SEP      - Minimum separation between residues considered 
 NPC      - Number of contacts predicted correctly 
 PC(P)    - Percent of contacts predicted correctly from CONSIDERED in PREDICTION 
 PC(T)    - Percent of contacts predicted correctly from CONSIDERED in TARGET with SEP limit 
 PC(TT)   - Percent of contacts predicted correctly from TOTAL in TARGET with SEP limit 
 
                        CONSIDERED     CONSIDERED       TOTAL          TOTAL 
                      in PREDICTION    in TARGET    in PREDICTION    in TARGET 
 ALL RESIDUES USED         102             102           102            117 
 ALL CONTACTS (< 8.0A)     480             483           480            542 
 
               in PREDICTION      Predicted correctly          Submitted as        in TARGET 
                CONSIDERED     NPC   PC(P)   PC(T)   PC(TT)    NOT  predicted   CONSIDERED  TOTAL  |   SEP 
 RES CONTACTS       480        440   91.67   91.10   81.18       0     0.00         483       542  |   1-9999 
 RES CONTACTS       271        263   97.05   97.05   84.84       0     0.00         271       310  |   1-4    
 RES CONTACTS        26         20   76.92   76.92   54.05       0     0.00          26        37  |   5-8    
 RES CONTACTS       183        157   85.79   84.41   80.51       0     0.00         186       195  |   9-9999 
 
 
 
# WARNING! TARGET 884 atoms, MODEL 1052 atoms, 884 common with TARGET 
           Number of atoms possible to evaluate: 765 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    36.47           90.1   202    87.1   232     ARMSMC  
     SECONDARY STRUCTURE . .    10.16           99.1   117    99.2   118     ARMSMC  
     SURFACE . . . . . . . .    40.14           89.0   118    81.4   145     ARMSMC  
     BURIED  . . . . . . . .    30.57           91.7    84    96.6    87     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    63.10           57.3    82    86.3    95     ARMSSC1 
     RELIABLE SIDE CHAINS  .    63.25           56.6    76    86.4    88     ARMSSC1 
     SECONDARY STRUCTURE . .    66.16           55.8    52   100.0    52     ARMSSC1 
     SURFACE . . . . . . . .    69.88           51.2    43    78.2    55     ARMSSC1 
     BURIED  . . . . . . . .    54.67           64.1    39    97.5    40     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    61.54           60.7    61    87.1    70     ARMSSC2 
     RELIABLE SIDE CHAINS  .    61.58           56.1    41    83.7    49     ARMSSC2 
     SECONDARY STRUCTURE . .    66.21           60.0    40   100.0    40     ARMSSC2 
     SURFACE . . . . . . . .    57.71           59.4    32    80.0    40     ARMSSC2 
     BURIED  . . . . . . . .    65.51           62.1    29    96.7    30     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    70.86           52.6    19    82.6    23     ARMSSC3 
     RELIABLE SIDE CHAINS  .    74.24           52.9    17    85.0    20     ARMSSC3 
     SECONDARY STRUCTURE . .    73.62           41.7    12   100.0    12     ARMSSC3 
     SURFACE . . . . . . . .    78.64           50.0    14    77.8    18     ARMSSC3 
     BURIED  . . . . . . . .    42.02           60.0     5   100.0     5     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    78.90           40.0    10    90.9    11     ARMSSC4 
     RELIABLE SIDE CHAINS  .    78.90           40.0    10    90.9    11     ARMSSC4 
     SECONDARY STRUCTURE . .    93.97           33.3     6   100.0     6     ARMSSC4 
     SURFACE . . . . . . . .    87.86           25.0     8    88.9     9     ARMSSC4 
     BURIED  . . . . . . . .    15.73          100.0     2   100.0     2     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1    1 - 102  102  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT   102      1 - 102      1.39     1.39 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1    1 - 102  102  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT   102      1 - 102      1.39     1.39 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1    1 - 102  102  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    67      1 - 67       0.93     1.51 
  LCS LOCAL_SCORE:             52.65 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS       1       P    67  102  102       C       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS       2       F    67  102  102       E       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS       3       L    67  102  102       E       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS       4       E    67  102  102       E       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS       5       L    67  102  102       E       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS       6       D    67  102  102       E       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS       7       T    67  102  102       E       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS       8       N    67  102  102       C       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS       9       L    67  102  102       C       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      10       P    67  102  102       C       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      11       A    67  102  102       H       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      12       N    67  102  102       H       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      13       R    67  102  102       H       14  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      14       V    67  102  102       C       17  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      15       P    67  102  102       C       19  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      16       A    67  102  102       C       13  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      17       G    67  102  102       C       14  46  72  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      18       L    67  102  102       H       22  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      19       E    67  102  102       H       19  46  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      20       K    67  102  102       H       14  46  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      21       R    67  102  102       H       30  46  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      22       L    67  102  102       H       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      23       C    67  102  102       H       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      24       A    67  102  102       H       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      25       A    67  102  102       H       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      26       A    67  102  102       H       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      27       A    67  102  102       H       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      28       S    67  102  102       H       28  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      29       I    67  102  102       H       25  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      30       L    67  102  102       H       19  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      31       G    67  102  102       C       20  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      32       K    67  102  102       C       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      33       P    67  102  102       C       26  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      34       A    67  102  102       H       21  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      35       D    67  102  102       H       14  46  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      36       R    67  102  102       H       17  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      37       V    67  102  102       C       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      38       N    67  102  102       E       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      39       V    67  102  102       E       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      40       T    67  102  102       E       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      41       V    67  102  102       E       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      42       R    67  102  102       E       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      43       P    67  102  102       C       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      44       G    67  102  102       C       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      45       L    67  102  102       C       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      46       A    67  102  102       C       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      47       M    67  102  102       C       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      48       A    67  102  102       C       18  46  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      49       L    67  102  102       E        9  45  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      50       S    67  102  102       C        6  19  55  77  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      51       G    67  102  102       C        9  21  58  80  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      52       S    67  102  102       E        9  44  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      53       T    67  102  102       C        9  46  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      54       E    67  102  102       C       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      55       P    67  102  102       C       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      56       C    67  102  102       C       26  46  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      57       A    67  102  102       E       14  44  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      58       Q    67  102  102       E       14  44  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      59       L    67  102  102       E       17  46  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      60       S    67  102  102       E       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      61       I    67  102  102       E       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      62       S    67  102  102       E       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      63       S    67  102  102       E       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      64       I    67  102  102       E       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      65       G    67  102  102       C       12  43  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      66       V    67  102  102       C       13  46  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      67       V    67  102  102       C       15  31  72  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      68       G    13  102  102       C        5  10  35  69  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      69       T     5  102  102       C        2   3  27  69  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      70       A     5  102  102       H        2   4  23  48  64  81  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      71       E     5  102  102       H        3   7  14  24  41  76  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      72       D    31  102  102       H        3   4  11  17  69  83  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      73       N    31  102  102       H       11  25  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      74       R    31  102  102       H       13  44  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      75       S    31  102  102       H       11  36  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      76       H    31  102  102       H       11  35  71  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      77       S    31  102  102       H       11  45  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      78       A    31  102  102       H       11  44  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      79       H    31  102  102       H       11  41  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      80       F    31  102  102       H       11  40  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      81       F    31  102  102       H       11  45  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      82       E    31  102  102       H       11  42  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      83       F    31  102  102       H       11  36  66  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      84       L    31  102  102       H       11  35  65  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      85       T    31  102  102       H       11  45  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      86       K    31  102  102       H       11  45  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      87       E    31  102  102       H        9  44  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      88       L    31  102  102       H       15  45  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      89       A    31  102  102       C       14  36  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      90       L    31  102  102       C        4  33  64  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      91       G    31  102  102       C        7  36  65  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      92       Q    31  102  102       H       14  46  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      93       D    31  102  102       H       30  46  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      94       R    31  102  102       H       26  45  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      95       I    31  102  102       E       26  46  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      96       L    31  102  102       E       28  46  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      97       I    31  102  102       E       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      98       R    31  102  102       E       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS      99       F    31  102  102       E       30  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS     100       F    31  102  102       E       23  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS     101       P    31  102  102       E       21  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS     102       L    31  102  102       E       21  47  73  81  84  84  86  87  87  87  87  87  87  87  87  87  87  87  87  87  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):  40.02 
 
 NUMBER_OF_CA_Tg:  117      NUMBER_OF_CA_Pr:  102      PERCENT_OF_CA:  87.18  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max      36      55      86      95      99      99     101     102     102     102     102     102     102     102     102     102     102     102     102     102  
 GDT PERCENT_OF_CA_Pr   35.29   53.92   84.31   93.14   97.06   97.06   99.02  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00 
 GDT PERCENT_OF_CA_Tg   30.77   47.01   73.50   81.20   84.62   84.62   86.32   87.18   87.18   87.18   87.18   87.18   87.18   87.18   87.18   87.18   87.18   87.18   87.18   87.18 
 GDT FRAGMENT: Beg-End   1-98    1-102   1-102   1-102   1-102   1-102   1-102   1-102   1-102   1-102   1-102   1-102   1-102   1-102   1-102   1-102   1-102   1-102   1-102   1-102 
 GDT RMS_LOCAL           0.30    0.57    0.94    1.03    1.17    1.17    1.31    1.39    1.39    1.39    1.39    1.39    1.39    1.39    1.39    1.39    1.39    1.39    1.39    1.39 
 GDT RMS_ALL_CA          1.63    1.56    1.42    1.41    1.40    1.40    1.39    1.39    1.39    1.39    1.39    1.39    1.39    1.39    1.39    1.39    1.39    1.39    1.39    1.39 
 
 
 TEST (CA)  RMS =   1.39               (Number of atoms:  102) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    1.39        102    87.2   117     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0137                            CRMSCA  
     SECONDARY STRUCTURE . .    1.39         59   100.0    59     CRMSCA  
     SURFACE . . . . . . . .    1.60         59    80.8    73     CRMSCA  
     BURIED  . . . . . . . .    1.05         43    97.7    44     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    1.45        503    87.3   576     CRMSMC  
     SECONDARY STRUCTURE . .    1.39        295   100.0   295     CRMSMC  
     SURFACE . . . . . . . .    1.64        288    80.9   356     CRMSMC  
     BURIED  . . . . . . . .    1.14        215    97.7   220     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    2.65        357    85.8   416     CRMSSC  
     RELIABLE SIDE CHAINS  .    2.64        297    84.9   350     CRMSSC  
     SECONDARY STRUCTURE . .    2.93        237   100.0   237     CRMSSC  
     SURFACE . . . . . . . .    3.07        192    77.7   247     CRMSSC  
     BURIED  . . . . . . . .    2.05        165    97.6   169     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    2.09        765    86.5   884     CRMSALL 
     SECONDARY STRUCTURE . .    2.28        473   100.0   473     CRMSALL 
     SURFACE . . . . . . . .    2.38        428    79.4   539     CRMSALL 
     BURIED  . . . . . . . .    1.65        337    97.7   345     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.782      0.449       0.241    102    87.2   117     ERRCA  
     SECONDARY STRUCTURE . .    0.700      0.411       0.221     59   100.0    59     ERRCA  
     SURFACE . . . . . . . .    0.932      0.490       0.258     59    80.8    73     ERRCA  
     BURIED  . . . . . . . .    0.575      0.392       0.218     43    97.7    44     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.816      0.458       0.245    503    87.3   576     ERRMC  
     SECONDARY STRUCTURE . .    0.715      0.422       0.227    295   100.0   295     ERRMC  
     SURFACE . . . . . . . .    0.956      0.492       0.255    288    80.9   356     ERRMC  
     BURIED  . . . . . . . .    0.629      0.413       0.230    215    97.7   220     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    1.580      0.532       0.271    357    85.8   416     ERRSC  
     RELIABLE SIDE CHAINS  .    1.533      0.519       0.265    297    84.9   350     ERRSC  
     SECONDARY STRUCTURE . .    1.770      0.551       0.280    237   100.0   237     ERRSC  
     SURFACE . . . . . . . .    1.937      0.588       0.298    192    77.7   247     ERRSC  
     BURIED  . . . . . . . .    1.165      0.468       0.239    165    97.6   169     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    1.170      0.495       0.259    765    86.5   884     ERRALL 
     SECONDARY STRUCTURE . .    1.235      0.488       0.256    473   100.0   473     ERRALL 
     SURFACE . . . . . . . .    1.388      0.536       0.275    428    79.4   539     ERRALL 
     BURIED  . . . . . . . .    0.893      0.443       0.238    337    97.7   345     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        47        95        97       102       102     102     117   DISTCA 
CA  (P)     40.17     81.20     82.91     87.18     87.18             117   DISTCA 
CA  (RMS)    0.64      1.06      1.11      1.39      1.39                   DISTCA 
 
ALL (N)       309       616       675       734       765     765     884   DISTALL 
ALL (P)     34.95     69.68     76.36     83.03     86.54             884   DISTALL 
ALL (RMS)    0.67      1.10      1.29      1.64      2.09                   DISTALL 
 
 
 
 
END of the results output 
