 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
#          The number of residues in SS section: 117 , MODEL 117 , TARGET 117 
#          The number of residues possible to evaluate: 117 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP     1     P     C     C             1.00 
 SSP     2     F     E     E             1.00 
 SSP     3     L     E     E             1.00 
 SSP     4     E     E     E             1.00 
 SSP     5     L     E     E             1.00 
 SSP     6     D     E     E             1.00 
 SSP     7     T     E     E             1.00 
 SSP     8     N     C     C             1.00 
 SSP     9     L     C     C             1.00 
 SSP    10     P     C     C             1.00 
 SSP    11     A     H     H             1.00 
 SSP    12     N     H     H             1.00 
 SSP    13     R     H     H             1.00 
 SSP    14     V     C     C             1.00 
 SSP    15     P     C     C             1.00 
 SSP    16     A     C     C             1.00 
 SSP    17     G     C     C             1.00 
 SSP    18     L     H     H             1.00 
 SSP    19     E     H     H             1.00 
 SSP    20     K     H     H             1.00 
 SSP    21     R     H     H             1.00 
 SSP    22     L     H     H             1.00 
 SSP    23     C     H     H             1.00 
 SSP    24     A     H     H             1.00 
 SSP    25     A     H     H             1.00 
 SSP    26     A     H     H             1.00 
 SSP    27     A     H     H             1.00 
 SSP    28     S     H     H             1.00 
 SSP    29     I     H     H             1.00 
 SSP    30     L     H     H             1.00 
 SSP    31     G     C     C             1.00 
 SSP    32     K     C     C             1.00 
 SSP    33     P     C     C             1.00 
 SSP    34     A     H     H             1.00 
 SSP    35     D     H     H             1.00 
 SSP    36     R     H     H             1.00 
 SSP    37     V     C     C             1.00 
 SSP    38     N     E     E             1.00 
 SSP    39     V     E     E             1.00 
 SSP    40     T     E     E             1.00 
 SSP    41     V     E     E             1.00 
 SSP    42     R     E     E             1.00 
 SSP    43     P     C     C             1.00 
 SSP    44     G     C     C             1.00 
 SSP    45     L     C     C             1.00 
 SSP    46     A     C     C             1.00 
 SSP    47     M     C     C             1.00 
 SSP    48     A     C     C             1.00 
 SSP    49     L     E     E             1.00 
 SSP    50     S     C     C             1.00 
 SSP    51     G     C     C             1.00 
 SSP    52     S     E     E             1.00 
 SSP    53     T     C     C             1.00 
 SSP    54     E     C     C             1.00 
 SSP    55     P     C     C             1.00 
 SSP    56     C     C     C             1.00 
 SSP    57     A     E     E             1.00 
 SSP    58     Q     E     E             1.00 
 SSP    59     L     E     E             1.00 
 SSP    60     S     E     E             1.00 
 SSP    61     I     E     E             1.00 
 SSP    62     S     E     E             1.00 
 SSP    63     S     E     E             1.00 
 SSP    64     I     E     C             1.00 
 SSP    65     G     C     C             1.00 
 SSP    66     V     C     C             1.00 
 SSP    67     V     C     C             1.00 
 SSP    68     G     C     C             1.00 
 SSP    69     T     C     C             1.00 
 SSP    70     A     H     C             1.00 
 SSP    71     E     H     C             1.00 
 SSP    72     D     H     C             1.00 
 SSP    73     N     H     C             1.00 
 SSP    74     R     H     H             1.00 
 SSP    75     S     H     H             1.00 
 SSP    76     H     H     H             1.00 
 SSP    77     S     H     H             1.00 
 SSP    78     A     H     H             1.00 
 SSP    79     H     H     H             1.00 
 SSP    80     F     H     H             1.00 
 SSP    81     F     H     H             1.00 
 SSP    82     E     H     H             1.00 
 SSP    83     F     H     H             1.00 
 SSP    84     L     H     H             1.00 
 SSP    85     T     H     H             1.00 
 SSP    86     K     H     H             1.00 
 SSP    87     E     H     H             1.00 
 SSP    88     L     H     H             1.00 
 SSP    89     A     C     C             1.00 
 SSP    90     L     C     C             1.00 
 SSP    91     G     C     C             1.00 
 SSP    92     Q     H     C             1.00 
 SSP    93     D     H     C             1.00 
 SSP    94     R     H     C             1.00 
 SSP    95     I     E     E             1.00 
 SSP    96     L     E     E             1.00 
 SSP    97     I     E     E             1.00 
 SSP    98     R     E     E             1.00 
 SSP    99     F     E     E             1.00 
 SSP   100     F     E     E             1.00 
 SSP   101     P     E     E             1.00 
 SSP   102     L     E     C             1.00 
 SSP   103     E     C     C             1.00 
 SSP   104     S     H     C             1.00 
 SSP   105     W     H     C             1.00 
 SSP   106     Q     H     C             1.00 
 SSP   107     I     C     C             1.00 
 SSP   108     G     E     C             1.00 
 SSP   109     K     E     C             1.00 
 SSP   110     I     C     C             1.00 
 SSP   111     G     C     C             1.00 
 SSP   112     T     E     C             1.00 
 SSP   113     V     E     C             1.00 
 SSP   114     M     H     C             1.00 
 SSP   115     T     H     C             1.00 
 SSP   116     F     H     C             1.00 
 SSP   117     L     C     C             1.00 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              83.8      72.3     81.8    100.0    100.0 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        83.0      80.9     87.9     81.2    100.0 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG           13              61.5               0.0 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00     117    100.0     83.8 
 
 BIN  0.00 - 1.00      1.00     117    100.0     83.8 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
 
 CONSIDERED - explicitly provided contacts (with positive confidence) or 
              non contacts (with negative confidence) possible to evaluate 
 SEP      - Minimum separation between residues considered 
 NPC      - Number of contacts predicted correctly 
 PC(P)    - Percent of contacts predicted correctly from CONSIDERED in PREDICTION 
 PC(T)    - Percent of contacts predicted correctly from CONSIDERED in TARGET with SEP limit 
 PC(TT)   - Percent of contacts predicted correctly from TOTAL in TARGET with SEP limit 
 
                        CONSIDERED     CONSIDERED       TOTAL          TOTAL 
                      in PREDICTION    in TARGET    in PREDICTION    in TARGET 
 ALL RESIDUES USED         117             117           117            117 
 ALL CONTACTS (< 8.0A)     527             542           527            542 
 
               in PREDICTION      Predicted correctly          Submitted as        in TARGET 
                CONSIDERED     NPC   PC(P)   PC(T)   PC(TT)    NOT  predicted   CONSIDERED  TOTAL  |   SEP 
 RES CONTACTS       527        458   86.91   84.50   84.50       0     0.00         542       542  |   1-9999 
 RES CONTACTS       303        287   94.72   92.58   92.58       0     0.00         310       310  |   1-4    
 RES CONTACTS        36         22   61.11   59.46   59.46       0     0.00          37        37  |   5-8    
 RES CONTACTS       188        149   79.26   76.41   76.41       0     0.00         195       195  |   9-9999 
 
 
 
# WARNING! TARGET 884 atoms, MODEL 885 atoms, 884 common with TARGET 
           Number of atoms possible to evaluate: 884 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    43.04           77.2   232   100.0   232     ARMSMC  
     SECONDARY STRUCTURE . .    23.81           83.9   118   100.0   118     ARMSMC  
     SURFACE . . . . . . . .    51.34           74.5   145   100.0   145     ARMSMC  
     BURIED  . . . . . . . .    23.38           81.6    87   100.0    87     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    70.88           61.1    95   100.0    95     ARMSSC1 
     RELIABLE SIDE CHAINS  .    70.73           60.2    88   100.0    88     ARMSSC1 
     SECONDARY STRUCTURE . .    70.14           59.6    52   100.0    52     ARMSSC1 
     SURFACE . . . . . . . .    73.46           54.5    55   100.0    55     ARMSSC1 
     BURIED  . . . . . . . .    67.16           70.0    40   100.0    40     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    65.99           61.4    70   100.0    70     ARMSSC2 
     RELIABLE SIDE CHAINS  .    66.78           61.2    49   100.0    49     ARMSSC2 
     SECONDARY STRUCTURE . .    68.10           62.5    40   100.0    40     ARMSSC2 
     SURFACE . . . . . . . .    71.25           60.0    40   100.0    40     ARMSSC2 
     BURIED  . . . . . . . .    58.24           63.3    30   100.0    30     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    78.54           39.1    23   100.0    23     ARMSSC3 
     RELIABLE SIDE CHAINS  .    78.31           40.0    20   100.0    20     ARMSSC3 
     SECONDARY STRUCTURE . .    78.73           33.3    12   100.0    12     ARMSSC3 
     SURFACE . . . . . . . .    78.84           38.9    18   100.0    18     ARMSSC3 
     BURIED  . . . . . . . .    77.44           40.0     5   100.0     5     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    88.73           36.4    11   100.0    11     ARMSSC4 
     RELIABLE SIDE CHAINS  .    88.73           36.4    11   100.0    11     ARMSSC4 
     SECONDARY STRUCTURE . .    74.71           50.0     6   100.0     6     ARMSSC4 
     SURFACE . . . . . . . .    78.58           44.4     9   100.0     9     ARMSSC4 
     BURIED  . . . . . . . .   124.56            0.0     2   100.0     2     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1    1 - 117  117  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT   117      1 - 117      2.54     2.54 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1    1 - 117  117  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT   110      1 - 110      1.93     2.56 
  LCS LOCAL_SCORE:             88.65 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1    1 - 117  117  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    49      1 - 49       0.99     2.64 
  LCS LOCAL_SCORE:             27.58 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS       1       P    49  110  117       C       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS       2       F    49  110  117       E       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS       3       L    49  110  117       E       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS       4       E    49  110  117       E       14  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS       5       L    49  110  117       E       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS       6       D    49  110  117       E       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS       7       T    49  110  117       E       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS       8       N    49  110  117       C       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS       9       L    49  110  117       C       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      10       P    49  110  117       C        9  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      11       A    49  110  117       H       14  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      12       N    49  110  117       H       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      13       R    49  110  117       H       13  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      14       V    49  110  117       C        5  42  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      15       P    49  110  117       C        5  30  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      16       A    49  110  117       C        5  40  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      17       G    49  110  117       C       14  43  66  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      18       L    49  110  117       H       14  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      19       E    49  110  117       H       14  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      20       K    49  110  117       H       14  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      21       R    49  110  117       H       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      22       L    49  110  117       H       14  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      23       C    49  110  117       H       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      24       A    49  110  117       H       14  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      25       A    49  110  117       H       11  32  64  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      26       A    49  110  117       H       14  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      27       A    49  110  117       H       13  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      28       S    49  110  117       H        9  27  58  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      29       I    49  110  117       H       12  38  64  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      30       L    49  110  117       H       14  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      31       G    49  110  117       C        8  39  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      32       K    49  110  117       C       13  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      33       P    49  110  117       C        8  30  63  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      34       A    49  110  117       H        8  30  63  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      35       D    49  110  117       H        9  32  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      36       R    49  110  117       H        7  36  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      37       V    49  110  117       C       17  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      38       N    49  110  117       E        9  35  65  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      39       V    49  110  117       E       14  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      40       T    49  110  117       E       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      41       V    49  110  117       E       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      42       R    49  110  117       E       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      43       P    49  110  117       C       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      44       G    49  110  117       C       14  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      45       L    49  110  117       C       13  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      46       A    49  110  117       C        9  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      47       M    49  110  117       C       10  40  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      48       A    49  110  117       C        9  34  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      49       L    49  110  117       E        9  19  64  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      50       S    21  110  117       C        7  14  30  75  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      51       G    21  110  117       C        9  15  48  76  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      52       S    21  110  117       E        8  23  64  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      53       T    21  110  117       C        9  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      54       E    21  110  117       C       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      55       P    21  110  117       C       13  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      56       C    21  110  117       C       14  41  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      57       A    21  110  117       E       10  35  64  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      58       Q    21  110  117       E        9  31  61  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      59       L    21  110  117       E        9  35  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      60       S    21  110  117       E       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      61       I    14  110  117       E       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      62       S    14  110  117       E       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      63       S    14  110  117       E       12  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      64       I    14  110  117       E       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      65       G    14  110  117       C       14  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      66       V    14  110  117       C        2  17  56  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      67       V    12  110  117       C        2   5  23  79  86  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      68       G     4  110  117       C        2  12  32  63  84  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      69       T     5  110  117       C        2   4  38  74  86  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      70       A     5  110  117       H        2   8  16  37  53  74  88  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      71       E     5  110  117       H        2   4   5   8  40  48  79  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      72       D    18  110  117       H        2   3   7  19  35  77  87  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      73       N    29  110  117       H        5  37  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      74       R    29  110  117       H       14  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      75       S    29  110  117       H       11  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      76       H    29  110  117       H       11  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      77       S    29  110  117       H       11  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      78       A    29  110  117       H       12  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      79       H    29  110  117       H       11  38  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      80       F    29  110  117       H       11  37  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      81       F    29  110  117       H       11  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      82       E    29  110  117       H       11  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      83       F    29  110  117       H       11  37  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      84       L    29  110  117       H       11  36  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      85       T    29  110  117       H       11  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      86       K    29  110  117       H       11  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      87       E    29  110  117       H       11  36  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      88       L    29  110  117       H        9  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      89       A    29  110  117       C        8  29  60  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      90       L    29  110  117       C        4   9  49  79  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      91       G    29  110  117       C        4  24  60  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      92       Q    29  110  117       H       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      93       D    29  110  117       H       11  36  60  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      94       R    29  110  117       H       11  36  60  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      95       I    29  110  117       E       13  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      96       L    29  110  117       E       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      97       I    29  110  117       E       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      98       R    29  110  117       E       18  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS      99       F    29  110  117       E       15  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS     100       F    29  110  117       E       15  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS     101       P    29  110  117       E       12  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS     102       L    29  110  117       E       14  43  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS     103       E    19  110  117       C        9  35  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS     104       S    19  110  117       H        9  30  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS     105       W    19  110  117       H        8  39  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS     106       Q    19  110  117       H        6  30  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS     107       I    19  110  117       C        5  30  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS     108       G    15  110  117       E        2  22  67  82  87  89  89  91  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS     109       K     4  110  117       E        2   3   4   5   5   6   9  11  64  92  94  95  96  98  98  99 100 100 100 100  
 LCS     110       I     4  110  117       C        2   2   3   4   5   5   7   8   9  10  12  20  64  94  96  98 100 100 100 100  
 LCS     111       G     4    7  117       C        2   2   3   3   5   5   7   8   9  11  47  93  94  96  98  99 100 100 100 100  
 LCS     112       T     3    5  117       E        2   2   2   4   5   6   7  10  42  66  91  95  96  98  98  99 100 100 100 100  
 LCS     113       V     3    5  117       E        2   2   2  29  40  48  76  82  88  94  94  95  96  98  98  99 100 100 100 100  
 LCS     114       M     3    5  117       H        2   5  16  21  31  51  78  84  90  94  94  95  96  98  98  99 100 100 100 100  
 LCS     115       T     3    5  117       H        2   2   2   3  37  73  82  90  92  94  94  95  96  98  98  99 100 100 100 100  
 LCS     116       F     3    5  117       H        2   2   2   3   4   4  16  83  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS     117       L     3    3  117       C        2   2  20  32  51  63  82  88  93  94  94  95  96  98  98  99 100 100 100 100  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):  27.58 
 
 NUMBER_OF_CA_Tg:  117      NUMBER_OF_CA_Pr:  117      PERCENT_OF_CA: 100.00  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max      22      51      79      97     102     105     105     107     109     111     111     112     113     115     115     116     117     117     117     117  
 GDT PERCENT_OF_CA_Pr   18.80   43.59   67.52   82.91   87.18   89.74   89.74   91.45   93.16   94.87   94.87   95.73   96.58   98.29   98.29   99.15  100.00  100.00  100.00  100.00 
 GDT PERCENT_OF_CA_Tg   18.80   43.59   67.52   82.91   87.18   89.74   89.74   91.45   93.16   94.87   94.87   95.73   96.58   98.29   98.29   99.15  100.00  100.00  100.00  100.00 
 GDT FRAGMENT: Beg-End   1-98    1-102   1-107   1-108   1-108   1-108   1-108   1-108   1-117   1-115   1-117   1-117   1-116   1-117   1-117   1-117   1-117   1-117   1-117   1-117 
 GDT RMS_LOCAL           0.38    0.67    1.00    1.19    1.27    1.35    1.35    1.52    1.66    1.92    1.82    1.93    2.09    2.24    2.24    2.38    2.54    2.54    2.54    2.54 
 GDT RMS_ALL_CA          2.67    2.61    2.55    2.56    2.56    2.56    2.56    2.56    2.57    2.57    2.55    2.56    2.56    2.55    2.55    2.54    2.54    2.54    2.54    2.54 
 
 
 TEST (CA)  RMS =   2.54               (Number of atoms:  117) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    2.54        117   100.0   117     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0217                            CRMSCA  
     SECONDARY STRUCTURE . .    1.53         59   100.0    59     CRMSCA  
     SURFACE . . . . . . . .    3.05         73   100.0    73     CRMSCA  
     BURIED  . . . . . . . .    1.28         44   100.0    44     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    2.58        576   100.0   576     CRMSMC  
     SECONDARY STRUCTURE . .    1.56        295   100.0   295     CRMSMC  
     SURFACE . . . . . . . .    3.11        356   100.0   356     CRMSMC  
     BURIED  . . . . . . . .    1.37        220   100.0   220     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    3.93        416   100.0   416     CRMSSC  
     RELIABLE SIDE CHAINS  .    3.94        350   100.0   350     CRMSSC  
     SECONDARY STRUCTURE . .    2.77        237   100.0   237     CRMSSC  
     SURFACE . . . . . . . .    4.80        247   100.0   247     CRMSSC  
     BURIED  . . . . . . . .    2.08        169   100.0   169     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    3.25        884   100.0   884     CRMSALL 
     SECONDARY STRUCTURE . .    2.23        473   100.0   473     CRMSALL 
     SURFACE . . . . . . . .    3.92        539   100.0   539     CRMSALL 
     BURIED  . . . . . . . .    1.75        345   100.0   345     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    8.217      0.728       0.752    117   100.0   117     ERRCA  
     SECONDARY STRUCTURE . .    8.814      0.799       0.820     59   100.0    59     ERRCA  
     SURFACE . . . . . . . .    7.838      0.685       0.711     73   100.0    73     ERRCA  
     BURIED  . . . . . . . .    8.847      0.798       0.819     44   100.0    44     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    8.177      0.721       0.747    576   100.0   576     ERRMC  
     SECONDARY STRUCTURE . .    8.774      0.792       0.815    295   100.0   295     ERRMC  
     SURFACE . . . . . . . .    7.803      0.680       0.707    356   100.0   356     ERRMC  
     BURIED  . . . . . . . .    8.781      0.788       0.811    220   100.0   220     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    7.338      0.622       0.658    416   100.0   416     ERRSC  
     RELIABLE SIDE CHAINS  .    7.377      0.628       0.661    350   100.0   350     ERRSC  
     SECONDARY STRUCTURE . .    7.874      0.679       0.715    237   100.0   237     ERRSC  
     SURFACE . . . . . . . .    6.697      0.555       0.588    247   100.0   247     ERRSC  
     BURIED  . . . . . . . .    8.276      0.721       0.761    169   100.0   169     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    7.797      0.676       0.707    884   100.0   884     ERRALL 
     SECONDARY STRUCTURE . .    8.331      0.736       0.766    473   100.0   473     ERRALL 
     SURFACE . . . . . . . .    7.323      0.625       0.656    539   100.0   539     ERRALL 
     BURIED  . . . . . . . .    8.537      0.756       0.787    345   100.0   345     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        45        90       104       107       117     117     117   DISTCA 
CA  (P)     38.46     76.92     88.89     91.45    100.00             117   DISTCA 
CA  (RMS)    0.71      1.12      1.36      1.52      2.54                   DISTCA 
 
ALL (N)       274       581       712       787       866     884     884   DISTALL 
ALL (P)     31.00     65.72     80.54     89.03     97.96             884   DISTALL 
ALL (RMS)    0.73      1.17      1.48      1.86      2.81                   DISTALL 
 
 
 
 
END of the results output 
