 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
# WARNING! The number of residues in SS section: 112 , MODEL 112 , TARGET 117 
#          The number of residues possible to evaluate: 112 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP     2     F     E     C             1.00 
 SSP     3     L     E     E             1.00 
 SSP     4     E     E     E             1.00 
 SSP     5     L     E     E             1.00 
 SSP     6     D     E     E             1.00 
 SSP     7     T     E     E             1.00 
 SSP     8     N     C     C             1.00 
 SSP     9     L     C     C             1.00 
 SSP    10     P     C     C             1.00 
 SSP    11     A     H     C             1.00 
 SSP    12     N     H     C             1.00 
 SSP    13     R     H     C             1.00 
 SSP    14     V     C     C             1.00 
 SSP    15     P     C     C             1.00 
 SSP    16     A     C     C             1.00 
 SSP    17     G     C     C             1.00 
 SSP    18     L     H     H             1.00 
 SSP    19     E     H     H             1.00 
 SSP    20     K     H     H             1.00 
 SSP    21     R     H     H             1.00 
 SSP    22     L     H     H             1.00 
 SSP    23     C     H     H             1.00 
 SSP    24     A     H     H             1.00 
 SSP    25     A     H     H             1.00 
 SSP    26     A     H     H             1.00 
 SSP    27     A     H     H             1.00 
 SSP    28     S     H     H             1.00 
 SSP    29     I     H     H             1.00 
 SSP    30     L     H     H             1.00 
 SSP    31     G     C     C             1.00 
 SSP    32     K     C     C             1.00 
 SSP    33     P     C     C             1.00 
 SSP    34     A     H     H             1.00 
 SSP    35     D     H     H             1.00 
 SSP    36     R     H     H             1.00 
 SSP    37     V     C     C             1.00 
 SSP    38     N     E     C             1.00 
 SSP    39     V     E     E             1.00 
 SSP    40     T     E     E             1.00 
 SSP    41     V     E     E             1.00 
 SSP    42     R     E     E             1.00 
 SSP    43     P     C     E             1.00 
 SSP    44     G     C     C             1.00 
 SSP    45     L     C     C             1.00 
 SSP    46     A     C     C             1.00 
 SSP    47     M     C     C             1.00 
 SSP    48     A     C     C             1.00 
 SSP    49     L     E     C             1.00 
 SSP    50     S     C     C             1.00 
 SSP    51     G     C     C             1.00 
 SSP    52     S     E     C             1.00 
 SSP    53     T     C     C             1.00 
 SSP    54     E     C     C             1.00 
 SSP    55     P     C     C             1.00 
 SSP    56     C     C     C             1.00 
 SSP    57     A     E     E             1.00 
 SSP    58     Q     E     E             1.00 
 SSP    59     L     E     E             1.00 
 SSP    60     S     E     E             1.00 
 SSP    61     I     E     E             1.00 
 SSP    62     S     E     E             1.00 
 SSP    63     S     E     C             1.00 
 SSP    64     I     E     C             1.00 
 SSP    65     G     C     C             1.00 
 SSP    66     V     C     C             1.00 
 SSP    67     V     C     C             1.00 
 SSP    68     G     C     C             1.00 
 SSP    69     T     C     C             1.00 
 SSP    70     A     H     H             1.00 
 SSP    71     E     H     H             1.00 
 SSP    72     D     H     H             1.00 
 SSP    73     N     H     H             1.00 
 SSP    74     R     H     H             1.00 
 SSP    75     S     H     H             1.00 
 SSP    76     H     H     H             1.00 
 SSP    77     S     H     H             1.00 
 SSP    78     A     H     H             1.00 
 SSP    79     H     H     H             1.00 
 SSP    80     F     H     H             1.00 
 SSP    81     F     H     H             1.00 
 SSP    82     E     H     H             1.00 
 SSP    83     F     H     H             1.00 
 SSP    84     L     H     H             1.00 
 SSP    85     T     H     H             1.00 
 SSP    86     K     H     H             1.00 
 SSP    87     E     H     H             1.00 
 SSP    88     L     H     H             1.00 
 SSP    89     A     C     C             1.00 
 SSP    90     L     C     C             1.00 
 SSP    91     G     C     C             1.00 
 SSP    92     Q     H     C             1.00 
 SSP    93     D     H     C             1.00 
 SSP    94     R     H     C             1.00 
 SSP    95     I     E     E             1.00 
 SSP    96     L     E     E             1.00 
 SSP    97     I     E     E             1.00 
 SSP    98     R     E     E             1.00 
 SSP    99     F     E     E             1.00 
 SSP   100     F     E     E             1.00 
 SSP   101     P     E     C             1.00 
 SSP   102     L     E     C             1.00 
 SSP   103     E     C     C             1.00 
 SSP   104     S     H     C             1.00 
 SSP   105     W     H     C             1.00 
 SSP   106     Q     H     C             1.00 
 SSP   107     I     C     C             1.00 
 SSP   108     G     E     C             1.00 
 SSP   109     K     E     E             1.00 
 SSP   110     I     C     C             1.00 
 SSP   111     G     C     C             1.00 
 SSP   112     T     E     E             1.00 
 SSP   113     V     E     C             1.00 
 SSP  BREAK 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              82.1      79.5     69.7     97.1     95.7 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        76.9      79.5     87.9     63.1     95.7 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG           12              58.3               0.0 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00     112    100.0     82.1 
 
 BIN  0.00 - 1.00      1.00     112    100.0     82.1 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
 
 CONSIDERED - explicitly provided contacts (with positive confidence) or 
              non contacts (with negative confidence) possible to evaluate 
 SEP      - Minimum separation between residues considered 
 NPC      - Number of contacts predicted correctly 
 PC(P)    - Percent of contacts predicted correctly from CONSIDERED in PREDICTION 
 PC(T)    - Percent of contacts predicted correctly from CONSIDERED in TARGET with SEP limit 
 PC(TT)   - Percent of contacts predicted correctly from TOTAL in TARGET with SEP limit 
 
                        CONSIDERED     CONSIDERED       TOTAL          TOTAL 
                      in PREDICTION    in TARGET    in PREDICTION    in TARGET 
 ALL RESIDUES USED         113             113           113            117 
 ALL CONTACTS (< 8.0A)     502             515           502            542 
 
               in PREDICTION      Predicted correctly          Submitted as        in TARGET 
                CONSIDERED     NPC   PC(P)   PC(T)   PC(TT)    NOT  predicted   CONSIDERED  TOTAL  |   SEP 
 RES CONTACTS       502        462   92.03   89.71   85.24       0     0.00         515       542  |   1-9999 
 RES CONTACTS       296        285   96.28   95.64   91.94       0     0.00         298       310  |   1-4    
 RES CONTACTS        34         29   85.29   85.29   78.38       0     0.00          34        37  |   5-8    
 RES CONTACTS       172        148   86.05   80.87   75.90       0     0.00         183       195  |   9-9999 
 
 
 
# WARNING! TARGET 884 atoms, MODEL 897 atoms, 883 common with TARGET 
           Number of atoms possible to evaluate: 850 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    31.41           85.3   224    96.6   232     ARMSMC  
     SECONDARY STRUCTURE . .    14.72           94.9   117    99.2   118     ARMSMC  
     SURFACE . . . . . . . .    36.35           83.3   138    95.2   145     ARMSMC  
     BURIED  . . . . . . . .    21.19           88.4    86    98.9    87     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    68.60           51.6    91    95.8    95     ARMSSC1 
     RELIABLE SIDE CHAINS  .    69.84           48.8    84    95.5    88     ARMSSC1 
     SECONDARY STRUCTURE . .    71.45           51.9    52   100.0    52     ARMSSC1 
     SURFACE . . . . . . . .    74.57           48.1    52    94.5    55     ARMSSC1 
     BURIED  . . . . . . . .    59.73           56.4    39    97.5    40     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    56.90           56.7    67    95.7    70     ARMSSC2 
     RELIABLE SIDE CHAINS  .    49.36           59.6    47    95.9    49     ARMSSC2 
     SECONDARY STRUCTURE . .    60.24           55.0    40   100.0    40     ARMSSC2 
     SURFACE . . . . . . . .    52.55           55.3    38    95.0    40     ARMSSC2 
     BURIED  . . . . . . . .    62.15           58.6    29    96.7    30     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .   101.16           13.0    23   100.0    23     ARMSSC3 
     RELIABLE SIDE CHAINS  .    98.66           15.0    20   100.0    20     ARMSSC3 
     SECONDARY STRUCTURE . .    99.64            8.3    12   100.0    12     ARMSSC3 
     SURFACE . . . . . . . .    96.04           16.7    18   100.0    18     ARMSSC3 
     BURIED  . . . . . . . .   117.78            0.0     5   100.0     5     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    80.91           36.4    11   100.0    11     ARMSSC4 
     RELIABLE SIDE CHAINS  .    80.91           36.4    11   100.0    11     ARMSSC4 
     SECONDARY STRUCTURE . .    75.73           33.3     6   100.0     6     ARMSSC4 
     SURFACE . . . . . . . .    71.73           44.4     9   100.0     9     ARMSSC4 
     BURIED  . . . . . . . .   113.37            0.0     2   100.0     2     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1    2 - 114  113  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT   113      2 - 114      1.37     1.37 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1    2 - 114  113  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT   113      2 - 114      1.37     1.37 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1    2 - 114  113  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    48      2 - 49       0.98     1.55 
  LCS LOCAL_SCORE:             31.62 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS       2       F    48  113  113       E       15  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS       3       L    48  113  113       E       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS       4       E    48  113  113       E       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS       5       L    48  113  113       E       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS       6       D    48  113  113       E       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS       7       T    48  113  113       E       14  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS       8       N    48  113  113       C       15  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS       9       L    48  113  113       C       13  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      10       P    48  113  113       C       13  43  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      11       A    48  113  113       H        9  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      12       N    48  113  113       H        9  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      13       R    48  113  113       H       18  46  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      14       V    48  113  113       C        9  42  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      15       P    48  113  113       C       10  42  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      16       A    48  113  113       C       10  43  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      17       G    48  113  113       C        4  23  63  85  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      18       L    48  113  113       H       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      19       E    48  113  113       H       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      20       K    48  113  113       H       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      21       R    48  113  113       H       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      22       L    48  113  113       H       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      23       C    48  113  113       H       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      24       A    48  113  113       H       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      25       A    48  113  113       H       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      26       A    48  113  113       H       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      27       A    48  113  113       H       16  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      28       S    48  113  113       H       12  46  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      29       I    48  113  113       H       17  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      30       L    48  113  113       H       17  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      31       G    48  113  113       C       15  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      32       K    48  113  113       C       17  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      33       P    48  113  113       C       11  44  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      34       A    48  113  113       H        6  39  72  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      35       D    48  113  113       H        6  23  65  85  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      36       R    48  113  113       H        6  23  72  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      37       V    48  113  113       C       11  46  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      38       N    48  113  113       E       15  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      39       V    48  113  113       E       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      40       T    48  113  113       E       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      41       V    48  113  113       E       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      42       R    48  113  113       E       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      43       P    48  113  113       C       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      44       G    48  113  113       C       12  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      45       L    48  113  113       C       16  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      46       A    48  113  113       C       13  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      47       M    48  113  113       C        6  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      48       A    48  113  113       C       11  46  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      49       L    48  113  113       E        5  36  74  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      50       S    17  113  113       C        5  12  52  82  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      51       G    17  113  113       C        5  12  52  79  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      52       S    17  113  113       E        5  11  52  85  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      53       T    17  113  113       C        5  46  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      54       E    17  113  113       C       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      55       P    17  113  113       C        8  43  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      56       C    17  113  113       C       11  37  74  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      57       A    17  113  113       E        5  34  58  82  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      58       Q    17  113  113       E        8  34  48  76  91  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      59       L    26  113  113       E        5  22  44  68  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      60       S    30  113  113       E       16  39  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      61       I    30  113  113       E       16  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      62       S    30  113  113       E       16  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      63       S    30  113  113       E       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      64       I    30  113  113       E       16  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      65       G    30  113  113       C        8  32  62  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      66       V    30  113  113       C        8  35  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      67       V    30  113  113       C       10  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      68       G    30  113  113       C        2   3   6  69  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      69       T    30  113  113       C       10  46  72  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      70       A    30  113  113       H        6  24  61  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      71       E    30  113  113       H       15  45  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      72       D    30  113  113       H       14  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      73       N    30  113  113       H       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      74       R    30  113  113       H       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      75       S    30  113  113       H       16  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      76       H    30  113  113       H       16  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      77       S    30  113  113       H       11  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      78       A    30  113  113       H       13  46  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      79       H    30  113  113       H       16  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      80       F    30  113  113       H       16  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      81       F    30  113  113       H       16  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      82       E    30  113  113       H       16  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      83       F    30  113  113       H       16  44  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      84       L    30  113  113       H       13  44  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      85       T    30  113  113       H       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      86       K    30  113  113       H       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      87       E    30  113  113       H        5  35  72  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      88       L    30  113  113       H       19  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      89       A    30  113  113       C       11  39  74  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      90       L    30  113  113       C        3  26  70  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      91       G    26  113  113       C        5  20  40  59  86  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      92       Q    26  113  113       H        4  23  70  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      93       D    26  113  113       H       16  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      94       R    26  113  113       H       10  34  53  80  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      95       I    26  113  113       E        9  34  58  85  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      96       L    26  113  113       E       13  35  66  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      97       I    26  113  113       E       16  43  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      98       R    26  113  113       E       16  41  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      99       F    26  113  113       E       16  47  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     100       F    26  113  113       E       16  45  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     101       P    26  113  113       E       16  44  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     102       L    26  113  113       E       16  46  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     103       E    26  113  113       C       11  44  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     104       S    26  113  113       H        9  44  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     105       W    26  113  113       H        9  35  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     106       Q    26  113  113       H       11  39  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     107       I    26  113  113       C        9  33  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     108       G    26  113  113       E        9  34  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     109       K    26  113  113       E        9  38  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     110       I    26  113  113       C        9  35  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     111       G    26  113  113       C        9  36  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     112       T    26  113  113       E        9  44  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     113       V    26  113  113       E        9  44  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     114       M    26  113  113       H        9  44  76  86  92  96  96  96  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):  29.49 
 
 NUMBER_OF_CA_Tg:  117      NUMBER_OF_CA_Pr:  113      PERCENT_OF_CA:  96.58  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max      23      55      89     101     108     113     113     113     113     113     113     113     113     113     113     113     113     113     113     113  
 GDT PERCENT_OF_CA_Pr   20.35   48.67   78.76   89.38   95.58  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00 
 GDT PERCENT_OF_CA_Tg   19.66   47.01   76.07   86.32   92.31   96.58   96.58   96.58   96.58   96.58   96.58   96.58   96.58   96.58   96.58   96.58   96.58   96.58   96.58   96.58 
 GDT FRAGMENT: Beg-End   3-88    2-99    2-114   2-114   2-114   2-114   2-114   2-114   2-114   2-114   2-114   2-114   2-114   2-114   2-114   2-114   2-114   2-114   2-114   2-114 
 GDT RMS_LOCAL           0.33    0.68    0.98    1.11    1.25    1.37    1.37    1.37    1.37    1.37    1.37    1.37    1.37    1.37    1.37    1.37    1.37    1.37    1.37    1.37 
 GDT RMS_ALL_CA          1.59    1.52    1.41    1.39    1.38    1.37    1.37    1.37    1.37    1.37    1.37    1.37    1.37    1.37    1.37    1.37    1.37    1.37    1.37    1.37 
 
 
 TEST (CA)  RMS =   1.37               (Number of atoms:  113) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    1.37        113    96.6   117     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0121                            CRMSCA  
     SECONDARY STRUCTURE . .    1.14         59   100.0    59     CRMSCA  
     SURFACE . . . . . . . .    1.42         70    95.9    73     CRMSCA  
     BURIED  . . . . . . . .    1.29         43    97.7    44     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    1.41        555    96.4   576     CRMSMC  
     SECONDARY STRUCTURE . .    1.21        295   100.0   295     CRMSMC  
     SURFACE . . . . . . . .    1.44        340    95.5   356     CRMSMC  
     BURIED  . . . . . . . .    1.36        215    97.7   220     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    2.58        399    95.9   416     CRMSSC  
     RELIABLE SIDE CHAINS  .    2.57        335    95.7   350     CRMSSC  
     SECONDARY STRUCTURE . .    2.51        237   100.0   237     CRMSSC  
     SURFACE . . . . . . . .    2.80        233    94.3   247     CRMSSC  
     BURIED  . . . . . . . .    2.23        166    98.2   169     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    2.04        850    96.2   884     CRMSALL 
     SECONDARY STRUCTURE . .    1.96        473   100.0   473     CRMSALL 
     SURFACE . . . . . . . .    2.16        512    95.0   539     CRMSALL 
     BURIED  . . . . . . . .    1.83        338    98.0   345     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.472      0.196       0.143    113    96.6   117     ERRCA  
     SECONDARY STRUCTURE . .    0.379      0.184       0.160     59   100.0    59     ERRCA  
     SURFACE . . . . . . . .    0.457      0.179       0.115     70    95.9    73     ERRCA  
     BURIED  . . . . . . . .    0.497      0.225       0.189     43    97.7    44     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.486      0.196       0.139    555    96.4   576     ERRMC  
     SECONDARY STRUCTURE . .    0.392      0.181       0.151    295   100.0   295     ERRMC  
     SURFACE . . . . . . . .    0.469      0.181       0.116    340    95.5   356     ERRMC  
     BURIED  . . . . . . . .    0.513      0.221       0.176    215    97.7   220     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    1.204      0.307       0.174    399    95.9   416     ERRSC  
     RELIABLE SIDE CHAINS  .    1.169      0.298       0.171    335    95.7   350     ERRSC  
     SECONDARY STRUCTURE . .    1.179      0.301       0.173    237   100.0   237     ERRSC  
     SURFACE . . . . . . . .    1.351      0.327       0.182    233    94.3   247     ERRSC  
     BURIED  . . . . . . . .    0.997      0.279       0.164    166    98.2   169     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.817      0.247       0.156    850    96.2   884     ERRALL 
     SECONDARY STRUCTURE . .    0.782      0.242       0.165    473   100.0   473     ERRALL 
     SURFACE . . . . . . . .    0.864      0.246       0.144    512    95.0   539     ERRALL 
     BURIED  . . . . . . . .    0.746      0.250       0.173    338    98.0   345     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        46        99       112       113       113     113     117   DISTCA 
CA  (P)     39.32     84.62     95.73     96.58     96.58             117   DISTCA 
CA  (RMS)    0.71      1.10      1.34      1.37      1.37                   DISTCA 
 
ALL (N)       275       639       774       828       849     850     884   DISTALL 
ALL (P)     31.11     72.29     87.56     93.67     96.04             884   DISTALL 
ALL (RMS)    0.74      1.18      1.49      1.74      2.00                   DISTALL 
 
 
 
 
END of the results output 
