 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
#          The number of residues in SS section: 65 , MODEL 65 , TARGET 114 
#          The number of residues possible to evaluate: 65 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP    34     Q     H     C             1.00 
 SSP    35     S     H     H             1.00 
 SSP    36     V     H     H             1.00 
 SSP    37     L     H     H             1.00 
 SSP    38     G     H     H             1.00 
 SSP    39     G     H     H             1.00 
 SSP    40     L     H     H             1.00 
 SSP    41     M     C     H             1.00 
 SSP    42     L     C     H             1.00 
 SSP    43     D     C     C             1.00 
 SSP  BREAK 
 SSP    49     D     H     C             1.00 
 SSP    50     V     H     C             1.00 
 SSP    51     A     C     C             1.00 
 SSP    52     E     C     C             1.00 
 SSP  BREAK 
 SSP    57     D     H     C             1.00 
 SSP    58     D     H     H             1.00 
 SSP    59     F     C     H             1.00 
 SSP    60     Y     C     H             1.00 
 SSP    61     T     C     H             1.00 
 SSP    62     R     C     H             1.00 
 SSP    63     P     H     H             1.00 
 SSP    64     H     H     H             1.00 
 SSP    65     R     H     H             1.00 
 SSP    66     H     H     H             1.00 
 SSP    67     I     H     H             1.00 
 SSP    68     F     H     H             1.00 
 SSP    69     T     H     H             1.00 
 SSP    70     E     H     H             1.00 
 SSP    71     M     H     C             1.00 
 SSP  BREAK 
 SSP    78     G     C     C             1.00 
 SSP    79     S     C     H             1.00 
 SSP    80     P     C     H             1.00 
 SSP    81     I     C     H             1.00 
 SSP    82     D     C     H             1.00 
 SSP    83     L     H     H             1.00 
 SSP    84     I     H     H             1.00 
 SSP    85     T     H     H             1.00 
 SSP    86     L     H     H             1.00 
 SSP    87     A     H     H             1.00 
 SSP    88     E     H     H             1.00 
 SSP    89     S     H     H             1.00 
 SSP    90     L     H     H             1.00 
 SSP    91     E     H     H             1.00 
 SSP    92     R     H     H             1.00 
 SSP    93     Q     H     C             1.00 
 SSP  BREAK 
 SSP   104     Y     H     C             1.00 
 SSP   105     L     H     C             1.00 
 SSP   106     A     H     C             1.00 
 SSP   107     E     H     C             1.00 
 SSP   108     L     H     C             1.00 
 SSP  BREAK 
 SSP   122     A     H     C             1.00 
 SSP   123     D     H     H             1.00 
 SSP   124     I     H     H             1.00 
 SSP   125     V     H     H             1.00 
 SSP   126     R     H     H             1.00 
 SSP   127     E     H     H             1.00 
 SSP   128     R     H     H             1.00 
 SSP   129     A     H     H             1.00 
 SSP   130     V     H     H             1.00 
 SSP   131     V     H     H             1.00 
 SSP   132     R     H     H             1.00 
 SSP   133     E     C     H             1.00 
 SSP   134     M     C     H             1.00 
 SSP   135     I     C     H             1.00 
 SSP   136     S     C     C             1.00 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              61.5      74.5      0.0     27.8     57.0 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        63.8      78.7    100.0     25.0     57.0 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG            6              83.3               0.0 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 1 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00      65    100.0     61.5 
 
 BIN  0.00 - 1.00      1.00      65    100.0     61.5 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
# WARNING! The number of residues with CB atom coordinates: MODEL 0 , TARGET 108 
 
# WARNING! TARGET 2040 atoms, MODEL 631 atoms, 631 common with TARGET 
           Number of atoms possible to evaluate: 260 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    42.17           81.4   118    52.2   226     ARMSMC  
     SECONDARY STRUCTURE . .    14.93           95.2    83    61.9   134     ARMSMC  
     SURFACE . . . . . . . .    52.30           75.4    57    42.5   134     ARMSMC  
     BURIED  . . . . . . . .    29.74           86.9    61    66.3    92     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    96     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    87     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    56     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    58     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    38     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    73     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    57     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    44     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    45     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    28     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    30     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    26     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    20     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    25     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     5     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    11     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    11     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0     7     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    11     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1   34 - 43   10   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    10     34 - 43       0.67     0.67 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   49 - 52   4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4     49 - 52       0.23     0.23 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3   57 - 71   15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    15     57 - 71       3.75     3.75 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  4   78 - 93   16   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    16     78 - 93       4.31     4.31 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  5  104 - 108  5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    104 - 108      0.55     0.55 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  6  122 - 136  15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    15    122 - 136      2.21     2.21 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1   34 - 43   10   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    10     34 - 43       0.67     0.67 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   49 - 52   4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4     49 - 52       0.23     0.23 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3   57 - 71   15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    12     60 - 71       1.87     4.73 
  LCS LOCAL_SCORE:             69.33 
 
 FRAGMENT  4   78 - 93   16   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    13     81 - 93       1.85     5.83 
  LCS LOCAL_SCORE:             69.92 
 
 FRAGMENT  5  104 - 108  5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    104 - 108      0.55     0.55 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  6  122 - 136  15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    14    122 - 135      1.07     2.49 
  LCS LOCAL_SCORE:             88.44 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1   34 - 43   10   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    10     34 - 43       0.67     0.67 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   49 - 52   4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4     49 - 52       0.23     0.23 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3   57 - 71   15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    11     61 - 71       0.74     5.51 
  LCS LOCAL_SCORE:             60.89 
 
 FRAGMENT  4   78 - 93   16   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    12     82 - 93       0.39     6.42 
  LCS LOCAL_SCORE:             60.94 
 
 FRAGMENT  5  104 - 108  5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    104 - 108      0.55     0.55 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  6  122 - 136  15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    13    122 - 134      0.76     2.69 
  LCS LOCAL_SCORE:             79.11 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS      34       Q    10   10   10       H        6   8   8   8   9  10  13  15  16  19  22  23  25  27  27  27  28  32  33  35  
 LCS      35       S    10   10   10       H        6   8   8   8   9  10  13  15  17  20  22  24  25  27  27  28  31  32  34  36  
 LCS      36       V    10   10   10       H        6   8   8   8   8  10  11  13  14  17  21  24  25  27  27  28  32  33  35  36  
 LCS      37       L    10   10   10       H        6   8   8   8   9  11  13  14  17  20  22  24  25  27  27  28  32  33  35  36  
 LCS      38       G    10   10   10       H        6   8   8   8   9  10  13  14  17  20  22  24  25  27  27  28  32  33  35  36  
 LCS      39       G    10   10   10       H        6   8  10  12  12  12  14  15  16  18  21  24  25  27  27  28  32  33  35  36  
 LCS      40       L    10   10   10       H        6   8   8   8   9  13  14  15  15  17  19  21  23  24  27  28  32  33  35  36  
 LCS      41       M    10   10   10       C        3   8   8   8   8   8  11  13  14  17  19  21  22  24  26  28  32  33  35  36  
 LCS      42       L    10   10   10       C        3   8   8   8   9  10  11  13  14  17  19  21  21  21  22  23  28  28  31  31  
 LCS      43       D    10   10   10       C        3   8   8   8   9  10  11  13  14  17  19  21  21  21  22  23  25  25  25  28  
 LCS      44       N     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      45       E     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      46       R     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      47       W     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      48       D     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      49       D     4    4    4       H        3   3   3   3   3   4   5   6   7   7   9  11  11  12  14  15  15  17  17  25  
 LCS      50       V     4    4    4       H        3   3   3   3   3   4   5   5   7   7   9  11  11  12  14  15  15  17  17  17  
 LCS      51       A     4    4    4       C        3   3   3   3   3   4   5   6   7   7   9  11  11  12  14  15  15  17  24  25  
 LCS      52       E     4    4    4       C        3   3   3   3   3   3   4   6   6   7   9  11  11  12  14  15  15  17  17  17  
 LCS      53       R     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      54       V     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      55       V     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      56       A     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      57       D     4    4   15       H        2   3   3   3   4   4   5   7   7   8  11  13  13  13  21  23  24  27  35  36  
 LCS      58       D     4    4   15       H        2   3   3   3   4   4   5   6   7   8  14  15  18  24  27  28  32  33  35  36  
 LCS      59       F     4    4   15       C        2   3   3   3   4   4   5   6   7  10  14  17  20  24  27  28  32  33  35  36  
 LCS      60       Y     4   12   15       C        2   3   3   3   3   5   9  10  10  10  12  13  13  13  14  15  32  33  35  36  
 LCS      61       T    11   12   15       C        5   9   9   9   9   9   9  10  10  10  19  24  25  27  27  28  32  33  35  36  
 LCS      62       R    11   12   15       C        6   9   9   9   9   9  13  15  17  20  22  24  25  27  27  28  32  33  35  36  
 LCS      63       P    11   12   15       H        6   9   9   9   9   9  13  14  16  20  22  24  25  27  27  28  32  33  35  36  
 LCS      64       H    11   12   15       H        6   9   9   9   9   9  10  13  14  18  20  24  25  27  27  28  32  33  35  36  
 LCS      65       R    11   12   15       H        6   9   9   9   9  10  13  15  17  20  22  24  25  27  27  28  32  33  35  36  
 LCS      66       H    11   12   15       H        6   9   9   9   9  10  13  15  17  20  22  24  25  27  27  28  32  33  35  36  
 LCS      67       I    11   12   15       H        6   9   9   9   9   9   9  12  16  19  22  24  25  27  27  28  32  33  35  36  
 LCS      68       F    11   12   15       H        6   9   9   9   9  10  13  15  17  20  22  24  25  27  27  28  32  33  35  36  
 LCS      69       T    11   12   15       H        4   9   9   9   9  10  13  15  17  20  22  24  25  27  27  28  32  33  35  36  
 LCS      70       E    11   12   15       H        3   9   9   9   9   9   9  11  16  20  22  24  25  27  27  28  32  33  35  36  
 LCS      71       M    11   12   15       H        3   9   9   9   9  10  13  15  17  20  22  24  25  27  27  28  32  33  35  36  
 LCS      72       A     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      73       R     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      74       L     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      75       Q     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      76       E     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      77       S     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      78       G     3    3   16       C        0   2   2   2   2   4   5   7   9  14  16  18  21  21  26  28  32  33  35  36  
 LCS      79       S     3    3   16       C        0   2   2   2   2   4   5   7   9  14  16  18  21  21  26  28  32  33  35  36  
 LCS      80       P     3    4   16       C        2   2   3   5   7   9  13  14  17  20  22  24  25  27  27  28  32  33  35  36  
 LCS      81       I     3   13   16       C        2   2   3   5   7  10  13  15  17  20  22  24  25  27  27  28  32  33  35  36  
 LCS      82       D    12   13   16       C        6  11  11  12  12  13  14  15  17  20  22  24  25  27  27  28  32  33  35  36  
 LCS      83       L    12   13   16       H        9  11  11  12  12  13  14  15  17  20  22  24  25  27  27  28  32  33  35  36  
 LCS      84       I    12   13   16       H        9  11  11  12  12  13  14  15  16  20  22  24  25  27  27  28  32  33  35  36  
 LCS      85       T    12   13   16       H        9  11  11  12  12  13  14  15  15  16  21  23  25  27  27  28  32  33  35  36  
 LCS      86       L    12   13   16       H        9  11  11  12  12  13  14  15  17  20  22  24  25  27  27  28  32  33  35  36  
 LCS      87       A    12   13   16       H        9  11  11  12  12  13  14  15  17  20  22  24  25  27  27  28  32  33  35  36  
 LCS      88       E    12   13   16       H        9  11  11  12  12  13  14  15  17  20  22  24  25  27  27  28  32  33  35  36  
 LCS      89       S    12   13   16       H        9  11  11  12  12  13  14  15  17  20  22  24  25  27  27  28  32  33  35  36  
 LCS      90       L    12   13   16       H        9  11  11  12  12  13  14  15  17  20  22  24  25  27  27  28  32  33  35  36  
 LCS      91       E    12   13   16       H        9  11  11  12  12  13  14  15  17  20  22  24  25  27  27  28  32  33  35  36  
 LCS      92       R    12   13   16       H        9  11  11  12  12  13  14  15  17  20  22  24  25  27  27  28  31  33  35  36  
 LCS      93       Q    12   13   16       H        9  11  11  12  12  13  14  15  16  19  22  23  25  27  27  27  31  32  35  36  
 LCS      94       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      95       Q     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      96       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      97       D     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      98       S     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      99       V     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     100       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     101       G     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     102       F     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     103       A     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     104       Y     5    5    5       H        4  11  11  12  12  13  14  15  15  16  17  18  19  25  27  28  32  33  35  36  
 LCS     105       L     5    5    5       H        3   4   4   4   7   7  14  15  15  16  17  18  19  20  27  28  32  33  35  36  
 LCS     106       A     5    5    5       H        3   4   4   4   7   7  10  10  12  16  17  18  19  20  21  28  32  33  35  36  
 LCS     107       E     5    5    5       H        3   4   4   4   7   7  14  15  15  16  17  18  19  20  21  23  24  32  35  36  
 LCS     108       L     5    5    5       H        3   4   4   4  12  13  14  15  15  16  17  18  19  19  21  23  24  32  35  36  
 LCS     109       S     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     110       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     111       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     112       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     113       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     114       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     115       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     116       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     117       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     118       I     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     119       S     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     120       A     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     121       Y     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     122       A    13   14   15       H        8  10  11  11  12  12  13  14  14  14  14  14  14  18  19  21  23  24  25  28  
 LCS     123       D    13   14   15       H        8  10  11  11  12  12  13  14  14  16  18  21  21  21  22  23  25  25  25  28  
 LCS     124       I    13   14   15       H        8  10  11  11  12  12  13  14  14  16  19  21  21  21  22  23  25  25  25  28  
 LCS     125       V    13   14   15       H        8  10  11  11  12  12  13  14  14  14  14  14  14  21  22  23  25  25  25  28  
 LCS     126       R    13   14   15       H        8  10  11  11  12  12  13  14  14  16  19  21  21  21  22  23  25  25  25  28  
 LCS     127       E    13   14   15       H        8  10  11  11  12  12  13  14  14  17  19  21  21  21  22  23  25  25  25  28  
 LCS     128       R    13   14   15       H        7  10  11  11  12  12  13  14  14  17  19  21  21  21  22  23  25  25  25  28  
 LCS     129       A    13   14   15       H        8  10  11  11  12  12  13  14  14  17  19  21  21  21  22  23  25  25  25  28  
 LCS     130       V    13   14   15       H        8  10  11  11  12  12  13  14  14  17  19  21  21  21  22  23  25  25  25  28  
 LCS     131       V    13   14   15       H        8  10  11  11  12  12  13  14  14  14  14  21  21  21  22  23  25  25  25  28  
 LCS     132       R    13   14   15       H        8  10  11  11  12  12  13  14  14  17  19  21  21  21  22  23  25  25  25  28  
 LCS     133       E    13   14   15       C        3  10  11  11  12  12  13  14  14  17  19  21  21  21  22  23  25  25  25  28  
 LCS     134       M    13   14   15       C        3   7  11  11  12  12  13  14  14  14  14  14  14  19  22  23  25  25  25  26  
 LCS     135       I     6   14   15       C        2   4   6  10  12  12  13  14  14  14  14  14  14  14  15  16  25  25  25  25  
 LCS     136       S     3    3   15       C        0   2   2   2   2   2   5   5   7  10  13  13  14  14  15  15  16  16  17  18  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   4.71 
 
 NUMBER_OF_CA_Tg:  114      NUMBER_OF_CA_Pr:   65      PERCENT_OF_CA:  57.02  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max      11      13      13      14      14      15      16      18      20      23      26      28      29      31      31      33      37      38      41      42  
 GDT PERCENT_OF_CA_Pr   16.92   20.00   20.00   21.54   21.54   23.08   24.62   27.69   30.77   35.38   40.00   43.08   44.62   47.69   47.69   50.77   56.92   58.46   63.08   64.62 
 GDT PERCENT_OF_CA_Tg    9.65   11.40   11.40   12.28   12.28   13.16   14.04   15.79   17.54   20.18   22.81   24.56   25.44   27.19   27.19   28.95   32.46   33.33   35.96   36.84 
 GDT FRAGMENT: Beg-End  83-93   82-104  82-104  39-104  39-104  40-108  40-108  39-108  35-92   35-92   34-93   35-92   34-92   34-93   34-93   35-105  36-106  36-106  36-108  35-108 
 GDT RMS_LOCAL           0.35    0.52    0.52    0.80    0.80    1.40    1.60    2.05    3.35    3.67    3.90    4.32    4.30    4.56    4.56    5.55    6.26    6.36    6.87    6.82 
 GDT RMS_ALL_CA         22.26   22.20   22.20   22.30   22.30   22.27   22.29   22.33   19.72   19.85   19.74   19.42   19.55   19.49   19.49   19.39   19.25   19.33   19.35   19.31 
 
 
 TEST (CA)  RMS =  13.60               (Number of atoms:   65) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   13.60         65    57.0   114     CRMSCA  
     CRN = ALL/NP  . . . . .    0.2092                            CRMSCA  
     SECONDARY STRUCTURE . .   12.36         45    67.2    67     CRMSCA  
     SURFACE . . . . . . . .   14.65         32    47.1    68     CRMSCA  
     BURIED  . . . . . . . .   12.50         33    71.7    46     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   13.52        260    46.1   564     CRMSMC  
     SECONDARY STRUCTURE . .   12.38        180    54.2   332     CRMSMC  
     SURFACE . . . . . . . .   14.49        128    38.0   337     CRMSMC  
     BURIED  . . . . . . . .   12.50        132    58.1   227     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    0.00          0     0.0  1584     CRMSSC  
     RELIABLE SIDE CHAINS  .    0.00          0     0.0  1520     CRMSSC  
     SECONDARY STRUCTURE . .    0.00          0     0.0   968     CRMSSC  
     SURFACE . . . . . . . .    0.00          0     0.0   940     CRMSSC  
     BURIED  . . . . . . . .    0.00          0     0.0   644     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   13.52        260    12.7  2040     CRMSALL 
     SECONDARY STRUCTURE . .   12.38        180    14.6  1236     CRMSALL 
     SURFACE . . . . . . . .   14.49        128    10.6  1212     CRMSALL 
     BURIED  . . . . . . . .   12.50        132    15.9   828     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   12.186      1.000       0.500     65    57.0   114     ERRCA  
     SECONDARY STRUCTURE . .   11.020      1.000       0.500     45    67.2    67     ERRCA  
     SURFACE . . . . . . . .   13.131      1.000       0.500     32    47.1    68     ERRCA  
     BURIED  . . . . . . . .   11.269      1.000       0.500     33    71.7    46     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   12.092      1.000       0.500    260    46.1   564     ERRMC  
     SECONDARY STRUCTURE . .   11.009      1.000       0.500    180    54.2   332     ERRMC  
     SURFACE . . . . . . . .   12.990      1.000       0.500    128    38.0   337     ERRMC  
     BURIED  . . . . . . . .   11.221      1.000       0.500    132    58.1   227     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.000      0.000       0.000      0     0.0  1584     ERRSC  
     RELIABLE SIDE CHAINS  .    0.000      0.000       0.000      0     0.0  1520     ERRSC  
     SECONDARY STRUCTURE . .    0.000      0.000       0.000      0     0.0   968     ERRSC  
     SURFACE . . . . . . . .    0.000      0.000       0.000      0     0.0   940     ERRSC  
     BURIED  . . . . . . . .    0.000      0.000       0.000      0     0.0   644     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   12.092      1.000       0.500    260    12.7  2040     ERRALL 
     SECONDARY STRUCTURE . .   11.009      1.000       0.500    180    14.6  1236     ERRALL 
     SURFACE . . . . . . . .   12.990      1.000       0.500    128    10.6  1212     ERRALL 
     BURIED  . . . . . . . .   11.221      1.000       0.500    132    15.9   828     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         0         1         6        30      65     114   DISTCA 
CA  (P)      0.00      0.00      0.88      5.26     26.32             114   DISTCA 
CA  (RMS)    0.00      0.00      2.95      4.11      6.71                   DISTCA 
 
ALL (N)         0         0         4        31       114     260    2040   DISTALL 
ALL (P)      0.00      0.00      0.20      1.52      5.59            2040   DISTALL 
ALL (RMS)    0.00      0.00      2.96      4.12      6.37                   DISTALL 
 
 
 
 
END of the results output 
