 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
# WARNING! The number of residues in SS section: 77 , MODEL 77 , TARGET 202 
#          The number of residues possible to evaluate: 77 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP    40     I     C     C             1.00 
 SSP    41     V     E     E             1.00 
 SSP    42     G     E     C             1.00 
 SSP    43     T     E     C             1.00 
 SSP    44     Y     H     C             1.00 
 SSP    45     E     H     C             1.00 
 SSP    46     L     H     C             1.00 
 SSP    47     A     H     C             1.00 
 SSP    48     E     H     C             1.00 
 SSP    49     S     H     H             1.00 
 SSP    50     L     H     H             1.00 
 SSP    51     L     H     H             1.00 
 SSP    52     K     H     H             1.00 
 SSP    53     A     H     H             1.00 
 SSP    54     K     H     H             1.00 
 SSP    55     E     H     H             1.00 
 SSP    56     L     H     H             1.00 
 SSP    57     A     H     H             1.00 
 SSP    58     A     H     H             1.00 
 SSP    59     T     H     H             1.00 
 SSP    60     Q     C     C             1.00 
 SSP    61     G     C     C             1.00 
 SSP    62     Y     E     E             1.00 
 SSP    63     G     E     E             1.00 
 SSP    64     L     E     E             1.00 
 SSP    65     L     E     E             1.00 
 SSP    66     L     E     C             1.00 
 SSP    67     W     E     C             1.00 
 SSP    68     D     E     C             1.00 
 SSP    69     G     C     C             1.00 
 SSP    70     Y     C     C             1.00 
 SSP    71     R     C     C             1.00 
 SSP  BREAK 
 SSP   110     V     C     C             1.00 
 SSP   111     A     C     C             1.00 
 SSP   112     S     C     C             1.00 
 SSP   113     K     C     C             1.00 
 SSP   114     S     C     C             1.00 
 SSP   115     S     H     H             1.00 
 SSP   116     H     H     H             1.00 
 SSP   117     S     H     H             1.00 
 SSP   118     R     H     H             1.00 
 SSP   119     G     C     C             1.00 
 SSP   120     S     C     C             1.00 
 SSP   121     A     E     E             1.00 
 SSP   122     I     E     E             1.00 
 SSP   123     D     E     E             1.00 
 SSP   124     L     E     E             1.00 
 SSP   125     T     E     E             1.00 
 SSP   126     L     E     C             1.00 
 SSP  BREAK 
 SSP   161     Q     H     C             1.00 
 SSP   162     N     H     C             1.00 
 SSP   163     R     H     H             1.00 
 SSP   164     R     H     H             1.00 
 SSP   165     R     H     H             1.00 
 SSP   166     L     H     H             1.00 
 SSP   167     R     H     H             1.00 
 SSP   168     S     H     H             1.00 
 SSP   169     I     H     H             1.00 
 SSP   170     M     H     H             1.00 
 SSP   171     E     H     H             1.00 
 SSP   172     N     C     H             1.00 
 SSP   173     S     C     C             1.00 
 SSP   174     G     C     C             1.00 
 SSP   175     F     E     C             1.00 
 SSP   176     E     E     C             1.00 
 SSP   177     A     E     E             1.00 
 SSP   178     Y     C     E             1.00 
 SSP   179     S     C     C             1.00 
 SSP   180     L     C     C             1.00 
 SSP   181     E     C     C             1.00 
 SSP   182     W     C     C             1.00 
 SSP   183     W     C     E             1.00 
 SSP   184     H     E     E             1.00 
 SSP   185     Y     E     E             1.00 
 SSP   186     V     E     E             1.00 
 SSP   187     L     E     C             1.00 
 SSP   188     R     C     C             1.00 
 SSP  BREAK 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              75.3      77.4     60.9     87.0     38.1 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        90.6     100.0     80.4     88.3     38.1 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG            8              87.5               0.0 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00      77    100.0     75.3 
 
 BIN  0.00 - 1.00      1.00      77    100.0     75.3 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
# WARNING! The number of residues with CB atom coordinates: MODEL 0 , TARGET 188 
 
# WARNING! TARGET 1650 atoms, MODEL 1334 atoms, 1334 common with TARGET 
           Number of atoms possible to evaluate: 308 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    60.27           66.2   148    36.8   402     ARMSMC  
     SECONDARY STRUCTURE . .    51.18           73.5    98    69.0   142     ARMSMC  
     SURFACE . . . . . . . .    53.40           76.9    52    26.3   198     ARMSMC  
     BURIED  . . . . . . . .    63.68           60.4    96    47.1   204     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   173     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   163     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    59     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    89     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    84     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   137     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   105     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    48     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    76     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    61     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    49     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    45     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    19     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    39     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    10     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    23     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    23     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0     9     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    19     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     4     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1   40 - 71   32   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    26     46 - 71       4.78     8.44 
  LCS LOCAL_SCORE:             72.75 
 
 FRAGMENT  2  110 - 126  17   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    17    110 - 126      1.39     1.39 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3  161 - 188  28   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    28    161 - 188      2.25     2.25 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1   40 - 71   32   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    13     47 - 59       1.98    16.29 
  LONGEST_CONTINUOUS_SEGMENT    13     48 - 60       0.57    18.14 
  LCS LOCAL_SCORE:             27.64 
 
 FRAGMENT  2  110 - 126  17   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    17    110 - 126      1.39     1.39 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3  161 - 188  28   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    26    162 - 187      1.93     2.27 
  LCS LOCAL_SCORE:             89.54 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1   40 - 71   32   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    13     48 - 60       0.57    18.14 
  LCS LOCAL_SCORE:             22.75 
 
 FRAGMENT  2  110 - 126  17   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    15    111 - 125      0.99     1.49 
  LONGEST_CONTINUOUS_SEGMENT    15    112 - 126      0.94     1.58 
  LCS LOCAL_SCORE:             85.12 
 
 FRAGMENT  3  161 - 188  28   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    16    162 - 177      0.89     2.43 
  LCS LOCAL_SCORE:             41.58 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS      40       I     3    5    8       C        1   1   1   1   1   2   2   3   4  17  19  19  20  22  24  25  27  30  34  35  
 LCS      41       V     3    5    8       E        1   1   1   1   1   2   2   3   4   7   7   8  21  22  24  25  27  31  34  35  
 LCS      42       G     3    5    8       E        1   1   1   1   1   2   2   3   4   7   7   8  10  10  11  12  13  13  30  30  
 LCS      43       T     3    5    8       E        0   1   1   1   1   2   2   2   4   7   7   8  10  10  11  12  13  13  15  16  
 LCS      44       Y     3    5   13       H        0   1   1   1   1   2   2   2   2   2   3   3   3   4   5   6   6   8   9  11  
 LCS      45       E     3    3   24       H        0   1   1   1   2   2   3   8   9  12  13  15  20  21  22  26  27  29  33  35  
 LCS      46       L     3    4   26       H        0   1   1   1   2   2   6   8   9  15  19  25  28  29  33  34  34  35  35  35  
 LCS      47       A     3   13   26       H        0   1   3   5  10  14  19  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS      48       E    13   13   26       H        3   5   6   6   6   6   6  16  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS      49       S    13   13   26       H        4   5   6   6   6   6   6   6   8  25  26  28  30  32  33  34  34  35  35  35  
 LCS      50       L    13   13   26       H        4   5   6   6   6   6   7   9  11  13  16  28  30  32  33  34  34  35  35  35  
 LCS      51       L    13   13   26       H        4   5   6   6   6   6   6   6   8   9  26  28  30  32  33  34  34  35  35  35  
 LCS      52       K    13   13   26       H        4   5   6   6   6   6   6  14  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS      53       A    13   13   26       H        4   5   6   6   6   6   7   9  11  22  26  28  30  32  33  34  34  35  35  35  
 LCS      54       K    13   13   26       H        4   5   6   6   6   6   6   6   6   7  10  18  21  31  33  34  34  35  35  35  
 LCS      55       E    13   13   26       H        4   5   6   6   6   6   6   6   8   9  12  28  30  32  33  34  34  35  35  35  
 LCS      56       L    13   13   26       H        4   5   6   6   6   6   6   6  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS      57       A    13   13   26       H        4   5   6   6   6   6   7   9  11  24  26  28  30  32  33  34  34  35  35  35  
 LCS      58       A    13   13   26       H        4   5   6   6   6   6   6   6   8   9  12  15  20  32  33  34  34  35  35  35  
 LCS      59       T    13   13   26       H        4   5   6   6   6   6   6   6   8   9  26  28  30  32  33  34  34  35  35  35  
 LCS      60       Q    13   13   26       C        4   5   6   6   6   6   6   6  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS      61       G     4    5   26       C        1   1   1   2   3   4   5   6   8   9  12  15  30  32  33  34  34  35  35  35  
 LCS      62       Y     4    5   26       E        1   1   1   2   3   3   5   6   8   9  23  28  30  32  33  34  34  35  35  35  
 LCS      63       G     4    5   26       E        1   1   1   2   3   4   5   6   8   9  12  15  30  32  33  34  34  35  35  35  
 LCS      64       L     4    7   26       E        1   1   1   2   3   3   4   5   7   9  12  27  30  32  33  34  34  35  35  35  
 LCS      65       L     4    7   26       E        1   1   1   2   3   4   5   6   8   9  12  28  30  32  33  34  34  35  35  35  
 LCS      66       L     4    7   26       E        1   1   1   2   3   4  14  19  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS      67       W     4    7   26       E        1   1   1   2   3   3   4   5   8  14  17  19  29  32  33  34  34  35  35  35  
 LCS      68       D     3    7   26       E        1   1   1   2   3   4  15  20  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS      69       G     3    7   26       C        1   1   1   2   3   3   4   4   4   7   8  10  11  11  20  21  22  35  35  35  
 LCS      70       Y     3    7   26       C        1   1   1   1   3   3   4   5   7   8   9  10  11  30  31  34  34  35  35  35  
 LCS      71       R     3    5   26       C        1   1   1   1   2   2   2   9  11  23  24  27  29  31  33  34  34  35  35  35  
 LCS      72       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      73       K     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      74       R     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      75       A     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      76       V     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      77       N     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      78       C     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      79       F     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      80       M     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      81       Q     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      82       W     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      83       A     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      84       A     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      85       Q     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      86       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      87       E     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      88       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      89       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      90       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      91       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      92       K     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      93       E     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      94       S     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      95       Y     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      96       Y     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      97       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      98       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      99       I     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     100       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     101       R     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     102       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     103       E     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     104       M     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     105       I     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     106       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     107       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     108       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     109       Y     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     110       V     6   17   17       C        1   7   9  12  16  20  20  21  22  24  26  28  29  32  33  34  34  35  35  35  
 LCS     111       A    15   17   17       C        3  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     112       S    15   17   17       C        1  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     113       K    15   17   17       C        3  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     114       S    15   17   17       C        3  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     115       S    15   17   17       H        4  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     116       H    15   17   17       H        3  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     117       S    15   17   17       H        3   9  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     118       R    15   17   17       H        3   7   9  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     119       G    15   17   17       C        2  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     120       S    15   17   17       C        1   7  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     121       A    15   17   17       E        3  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     122       I    15   17   17       E        3  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     123       D    15   17   17       E        3  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     124       L    15   17   17       E        2  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     125       T    15   17   17       E        4  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     126       L    15   17   17       E        3  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     127       Y     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     128       R     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     129       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     130       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     131       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     132       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     133       E     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     134       L     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     135       V     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     136       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     137       M     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     138       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     139       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     140       R     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     141       F     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     142       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     143       F     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     144       M     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     145       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     146       E     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     147       R     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     148       S     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     149       H     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     150       H     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     151       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     152       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     153       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     154       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     155       I     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     156       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     157       C     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     158       N     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     159       E     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     160       A     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     161       Q     7   20   28       H        1   1   1   4   9  15  19  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     162       N    16   26   28       H        3   8  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     163       R    16   26   28       H        3   7  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     164       R    16   26   28       H        3   6  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     165       R    16   26   28       H        4  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     166       L    16   26   28       H        3  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     167       R    16   26   28       H        3  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     168       S    16   26   28       H        3  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     169       I    16   26   28       H        4  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     170       M    16   26   28       H        4  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     171       E    16   26   28       H        4  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     172       N    16   26   28       C        4  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     173       S    16   26   28       C        4  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     174       G    16   26   28       C        4  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     175       F    16   26   28       E        3  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     176       E    16   26   28       E        1   5  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     177       A    16   26   28       E        1   9  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     178       Y    14   26   28       C        1   3   7  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     179       S     5   26   28       C        1   1   5   8  13  15  19  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     180       L     5   26   28       C        1   2   6  10  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     181       E     0   26   28       C        0   0   1   1   1   1   2   4  12  21  24  25  27  30  33  34  34  35  35  35  
 LCS     182       W     3   26   28       C        1   1   7   9  13  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     183       W     6   26   28       C        1   7   9  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     184       H     6   26   28       E        4  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     185       Y     6   26   28       E        4  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     186       V     6   26   28       E        4  10  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     187       L     6   26   28       E        1   5  14  17  18  20  20  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS     188       R     6    6   28       C        0   1   2   3   3  14  19  21  22  25  26  28  30  32  33  34  34  35  35  35  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   1.97 
 
 NUMBER_OF_CA_Tg:  202      NUMBER_OF_CA_Pr:   77      PERCENT_OF_CA:  38.12  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max      10      22      30      36      38      41      41      43      46      51      54      58      62      65      68      70      70      71      71      72  
 GDT PERCENT_OF_CA_Pr   12.99   28.57   38.96   46.75   49.35   53.25   53.25   55.84   59.74   66.23   70.13   75.32   80.52   84.42   88.31   90.91   90.91   92.21   92.21   93.51 
 GDT PERCENT_OF_CA_Tg    4.95   10.89   14.85   17.82   18.81   20.30   20.30   21.29   22.77   25.25   26.73   28.71   30.69   32.18   33.66   34.65   34.65   35.15   35.15   35.64 
 GDT FRAGMENT: Beg-End  49-58  112-186 111-186 111-187 111-187 110-187 110-187 110-187  47-188  47-188  47-188  47-188  47-188  47-188  47-188  46-188  46-188  46-188  46-188  45-188 
 GDT RMS_LOCAL           0.36    0.68    0.90    1.17    1.24    1.53    1.53    1.75    2.59    3.09    3.29    3.74    4.04    4.18    4.37    4.52    4.52    4.62    4.62    4.81 
 GDT RMS_ALL_CA         23.20    6.94    6.83    6.79    6.77    6.87    6.87    6.91    6.54    6.31    6.38    6.32    6.36    6.44    6.41    6.32    6.32    6.30    6.30    6.22 
 
 
 TEST (CA)  RMS =   6.03               (Number of atoms:   77) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    6.03         77    38.1   202     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0784                            CRMSCA  
     SECONDARY STRUCTURE . .    6.42         50    70.4    71     CRMSCA  
     SURFACE . . . . . . . .    6.28         27    27.0   100     CRMSCA  
     BURIED  . . . . . . . .    5.90         50    49.0   102     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    5.97        308    30.9   996     CRMSMC  
     SECONDARY STRUCTURE . .    6.35        200    56.7   353     CRMSMC  
     SURFACE . . . . . . . .    6.07        108    21.9   494     CRMSMC  
     BURIED  . . . . . . . .    5.91        200    39.8   502     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    0.00          0     0.0   842     CRMSSC  
     RELIABLE SIDE CHAINS  .    0.00          0     0.0   740     CRMSSC  
     SECONDARY STRUCTURE . .    0.00          0     0.0   302     CRMSSC  
     SURFACE . . . . . . . .    0.00          0     0.0   422     CRMSSC  
     BURIED  . . . . . . . .    0.00          0     0.0   420     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    5.97        308    18.7  1650     CRMSALL 
     SECONDARY STRUCTURE . .    6.35        200    34.1   586     CRMSALL 
     SURFACE . . . . . . . .    6.07        108    13.1   822     CRMSALL 
     BURIED  . . . . . . . .    5.91        200    24.2   828     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.098      1.000       0.500     77    38.1   202     ERRCA  
     SECONDARY STRUCTURE . .    5.258      1.000       0.500     50    70.4    71     ERRCA  
     SURFACE . . . . . . . .    5.320      1.000       0.500     27    27.0   100     ERRCA  
     BURIED  . . . . . . . .    4.977      1.000       0.500     50    49.0   102     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.010      1.000       0.500    308    30.9   996     ERRMC  
     SECONDARY STRUCTURE . .    5.171      1.000       0.500    200    56.7   353     ERRMC  
     SURFACE . . . . . . . .    5.127      1.000       0.500    108    21.9   494     ERRMC  
     BURIED  . . . . . . . .    4.946      1.000       0.500    200    39.8   502     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.000      0.000       0.000      0     0.0   842     ERRSC  
     RELIABLE SIDE CHAINS  .    0.000      0.000       0.000      0     0.0   740     ERRSC  
     SECONDARY STRUCTURE . .    0.000      0.000       0.000      0     0.0   302     ERRSC  
     SURFACE . . . . . . . .    0.000      0.000       0.000      0     0.0   422     ERRSC  
     BURIED  . . . . . . . .    0.000      0.000       0.000      0     0.0   420     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.010      1.000       0.500    308    18.7  1650     ERRALL 
     SECONDARY STRUCTURE . .    5.171      1.000       0.500    200    34.1   586     ERRALL 
     SURFACE . . . . . . . .    5.127      1.000       0.500    108    13.1   822     ERRALL 
     BURIED  . . . . . . . .    4.946      1.000       0.500    200    24.2   828     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         8        25        47        72      77     202   DISTCA 
CA  (P)      0.00      3.96     12.38     23.27     35.64             202   DISTCA 
CA  (RMS)    0.00      1.66      2.29      3.26      5.03                   DISTCA 
 
ALL (N)         2        32        98       190       287     308    1650   DISTALL 
ALL (P)      0.12      1.94      5.94     11.52     17.39            1650   DISTALL 
ALL (RMS)    0.69      1.60      2.19      3.22      4.87                   DISTALL 
 
 
 
 
END of the results output 
