 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
# WARNING! The number of residues in SS section: 84 , MODEL 84 , TARGET 202 
#          The number of residues possible to evaluate: 84 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP    73     K     H     C             1.00 
 SSP    74     R     H     H             1.00 
 SSP    75     A     H     H             1.00 
 SSP    76     V     H     H             1.00 
 SSP    77     N     H     H             1.00 
 SSP    78     C     H     H             1.00 
 SSP    79     F     H     H             1.00 
 SSP    80     M     H     H             1.00 
 SSP    81     Q     H     H             1.00 
 SSP    82     W     H     H             1.00 
 SSP    83     A     H     H             1.00 
 SSP    84     A     H     H             1.00 
 SSP    85     Q     C     H             1.00 
 SSP    86     P     C     H             1.00 
 SSP    87     E     C     H             1.00 
 SSP    88     N     C     H             1.00 
 SSP    89     N     C     C             1.00 
 SSP    90     L     C     C             1.00 
 SSP    91     T     C     C             1.00 
 SSP    92     K     H     C             1.00 
 SSP    93     E     H     C             1.00 
 SSP    94     S     H     C             1.00 
 SSP    95     Y     H     C             1.00 
 SSP    96     Y     C     C             1.00 
 SSP    97     P     C     C             1.00 
 SSP    98     N     C     C             1.00 
 SSP    99     I     C     H             1.00 
 SSP   100     D     C     H             1.00 
 SSP   101     R     C     H             1.00 
 SSP   102     T     C     H             1.00 
 SSP   103     E     C     H             1.00 
 SSP   104     M     C     H             1.00 
 SSP   105     I     C     H             1.00 
 SSP   106     S     C     C             1.00 
 SSP  BREAK 
 SSP   108     G     C     C             1.00 
 SSP  BREAK 
 SSP   111     A     C     C             1.00 
 SSP   112     S     C     C             1.00 
 SSP   113     K     C     C             1.00 
 SSP   114     S     C     C             1.00 
 SSP   115     S     H     H             1.00 
 SSP   116     H     H     H             1.00 
 SSP   117     S     H     H             1.00 
 SSP   118     R     H     H             1.00 
 SSP   119     G     C     C             1.00 
 SSP   120     S     C     C             1.00 
 SSP   121     A     E     E             1.00 
 SSP   122     I     E     E             1.00 
 SSP   123     D     E     E             1.00 
 SSP   124     L     E     E             1.00 
 SSP   125     T     E     C             1.00 
 SSP   126     L     E     C             1.00 
 SSP   127     Y     E     C             1.00 
 SSP   128     R     E     C             1.00 
 SSP   129     L     C     C             1.00 
 SSP  BREAK 
 SSP   142     D     C     C             1.00 
 SSP   143     F     C     H             1.00 
 SSP   144     M     C     H             1.00 
 SSP   145     D     C     H             1.00 
 SSP   146     E     H     H             1.00 
 SSP   147     R     H     H             1.00 
 SSP   148     S     H     H             1.00 
 SSP   149     H     C     H             1.00 
 SSP   150     H     C     C             1.00 
 SSP   151     A     C     C             1.00 
 SSP   152     A     C     C             1.00 
 SSP  BREAK 
 SSP   168     S     H     C             1.00 
 SSP   169     I     H     C             1.00 
 SSP   170     M     H     E             1.00 
 SSP   171     E     H     C             1.00 
 SSP   172     N     C     C             1.00 
 SSP   173     S     C     C             1.00 
 SSP   174     G     C     C             1.00 
 SSP   175     F     E     C             1.00 
 SSP   176     E     E     C             1.00 
 SSP  BREAK 
 SSP   178     Y     C     C             1.00 
 SSP   179     S     C     C             1.00 
 SSP  BREAK 
 SSP   181     E     C     C             1.00 
 SSP   182     W     C     C             1.00 
 SSP   183     W     C     E             1.00 
 SSP   184     H     E     E             1.00 
 SSP   185     Y     E     E             1.00 
 SSP   186     V     E     E             1.00 
 SSP   187     L     E     C             1.00 
 SSP   188     R     C     C             1.00 
 SSP  BREAK 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              61.9      66.7     50.0     62.8     41.6 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        58.0      65.6     71.4     50.7     41.6 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG            8              62.5              12.5 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00      84    100.0     61.9 
 
 BIN  0.00 - 1.00      1.00      84    100.0     61.9 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
# WARNING! The number of residues with CB atom coordinates: MODEL 0 , TARGET 188 
 
# WARNING! TARGET 1650 atoms, MODEL 1293 atoms, 1293 common with TARGET 
           Number of atoms possible to evaluate: 336 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    83.71           49.4   154    38.3   402     ARMSMC  
     SECONDARY STRUCTURE . .    65.63           63.2    57    40.1   142     ARMSMC  
     SURFACE . . . . . . . .    89.02           47.8    67    33.8   198     ARMSMC  
     BURIED  . . . . . . . .    79.38           50.6    87    42.6   204     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   173     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   163     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    59     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    89     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    84     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   137     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   105     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    48     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    76     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    61     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    49     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    45     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    19     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    39     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    10     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    23     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    23     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0     9     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    19     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     4     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1   73 - 106  34   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    23     73 - 95       4.84    15.70 
  LCS LOCAL_SCORE:             59.08 
 
 FRAGMENT  2  111 - 129  19   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    19    111 - 129      2.15     2.15 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3  142 - 152  11   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    11    142 - 152      3.74     3.74 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  4  168 - 176  9    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     9    168 - 176      3.86     3.86 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  5  181 - 188  8    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     8    181 - 188      2.38     2.38 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1   73 - 106  34   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    15     73 - 87       1.48    19.47 
  LCS LOCAL_SCORE:             28.72 
 
 FRAGMENT  2  111 - 129  19   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    18    111 - 128      1.28     2.29 
  LCS LOCAL_SCORE:             93.91 
 
 FRAGMENT  3  142 - 152  11   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7    145 - 151      1.71     5.30 
  LCS LOCAL_SCORE:             53.72 
 
 FRAGMENT  4  168 - 176  9    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    170 - 174      1.72     5.47 
  LONGEST_CONTINUOUS_SEGMENT     5    171 - 175      1.95     5.05 
  LONGEST_CONTINUOUS_SEGMENT     5    172 - 176      1.69     6.05 
  LCS LOCAL_SCORE:             46.91 
 
 FRAGMENT  5  181 - 188  8    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7    182 - 188      1.69     2.65 
  LCS LOCAL_SCORE:             81.25 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1   73 - 106  34   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    13     73 - 85       0.33    18.77 
  LCS LOCAL_SCORE:             23.10 
 
 FRAGMENT  2  111 - 129  19   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    15    111 - 125      0.95     2.63 
  LCS LOCAL_SCORE:             69.81 
 
 FRAGMENT  3  142 - 152  11   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    145 - 149      0.63     5.33 
  LCS LOCAL_SCORE:             35.54 
 
 FRAGMENT  4  168 - 176  9    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    171 - 174      0.62     7.41 
  LCS LOCAL_SCORE:             34.57 
 
 FRAGMENT  5  181 - 188  8    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6    183 - 188      0.88     2.97 
  LCS LOCAL_SCORE:             65.62 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS      73       K    13   15   23       H        5   6   6   6   6   7   7   8   8   8  10  12  12  14  15  18  20  20  21  22  
 LCS      74       R    13   15   23       H        3   6   6   6   6   7   7   8   8   8  10  12  13  16  17  18  20  20  21  22  
 LCS      75       A    13   15   23       H        5   6   6   6   6   7   7   8   8   8  10  12  13  16  17  18  20  20  21  22  
 LCS      76       V    13   15   23       H        5   6   6   6   6   7   7   8   8   8  10  12  12  13  14  16  18  20  20  22  
 LCS      77       N    13   15   23       H        5   6   6   6   6   7   7   8   8   8  10  12  12  13  14  16  16  17  18  20  
 LCS      78       C    13   15   23       H        5   6   6   6   6   7   7   8   8   8  10  12  12  13  14  16  16  17  18  20  
 LCS      79       F    13   15   23       H        5   6   6   6   6   7   7   8   8   8  10  12  12  13  14  16  16  17  18  19  
 LCS      80       M    13   15   23       H        5   6   6   6   6   7   7   8   8   8  10  12  12  13  14  16  16  17  18  19  
 LCS      81       Q    13   15   23       H        5   6   6   6   6   7   7   8   8   8   9  10  11  13  14  16  16  17  18  19  
 LCS      82       W    13   15   23       H        5   6   6   6   6   7   7   8   8   8  10  12  12  13  14  16  16  17  18  19  
 LCS      83       A    13   15   23       H        5   6   6   6   6   7   7   8   8   8  10  12  12  13  14  16  16  17  18  19  
 LCS      84       A    13   15   23       H        5   6   6   6   6   7   7   8   8   8   9  10  10  11  11  16  16  17  18  19  
 LCS      85       Q    13   15   23       C        5   6   6   6   6   7   7   8   8   8   9  10  10  11  11  12  15  16  17  19  
 LCS      86       P     3   15   23       C        1   1   1   2   4   6   7   8   8   8   9  10  10  11  11  14  16  16  18  19  
 LCS      87       E     3   15   23       C        1   1   1   5   6   7   7   8   8   8  10  12  12  13  14  16  16  17  18  19  
 LCS      88       N     3    3   23       C        1   1   1   2   3   4   6   7   8   8   9  12  12  13  14  16  16  17  18  19  
 LCS      89       N     3    3   23       C        1   1   1   2   3   3   4   7   8   8   9  12  12  13  14  16  16  17  18  19  
 LCS      90       L     0    3   23       C        0   0   0   0   6   7   7   7   8   8   8   9  10  11  11  12  15  16  16  17  
 LCS      91       T     3    3   23       C        1   1   1   5   6   7   7   8   8   8   9  10  10  11  11  12  15  16  16  17  
 LCS      92       K     3    3   23       H        1   1   1   1   3   3   7   8   8   8   9  10  10  11  11  12  12  16  16  17  
 LCS      93       E     3    3   23       H        1   1   1   1   1   1   1   3   5   6   7   8   9  10  10  10  11  12  13  17  
 LCS      94       S     5    5   23       H        1   1   2   2   2   2   3   3   5   6   7   8   8  10  10  10  11  11  19  21  
 LCS      95       Y     5    5   23       H        1   1   2   2   2   2   3   4   5   6   7   8   8  10  10  10  11  20  20  21  
 LCS      96       Y     5    5   14       C        1   1   2   2   2   2   3   4   4   5   5   5   6   7   7   8   9  10  11  12  
 LCS      97       P     5    5   14       C        1   1   2   2   2   2   3   4   4   5   5   5   6   6   6   6   8   8   9  10  
 LCS      98       N     5    5   14       C        1   1   2   2   2   2   3   4   4   5   5   5   6   6   6   6   7   7   9   9  
 LCS      99       I     3    8   14       C        1   1   1   2   2   3   3   4   4   5   5   5   6   6   6   6   7   8   8   9  
 LCS     100       D     7    8   14       C        1   3   3   3   3   3   3   4   4   5   5   5  11  14  16  18  19  20  21  22  
 LCS     101       R     7    8   14       C        1   3   3   3   3   3   3   3   4   5  11  13  14  17  17  18  20  20  21  22  
 LCS     102       T     7    8   14       C        1   3   3   3   3   3   3   4   4   5   5   5   6   6   9  18  20  20  21  22  
 LCS     103       E     7    8   14       C        1   3   3   3   3   3   3   8  10  12  14  15  16  17  17  18  20  20  21  22  
 LCS     104       M     7    8   14       C        1   3   3   5   6   8   9  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     105       I     7    8   14       C        1   3   3   3   3   3   8   9   9  14  15  15  16  17  17  18  20  20  21  22  
 LCS     106       S     7    8   14       C        1   3   3   3   3   3   4  10  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     107       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     108       G     0    0    0       C        0   1   1   2   6   8   9  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     109       Y     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     110       V     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     111       A    15   18   19       C        5   7   8  10  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     112       S    15   18   19       C        1   6   8  10  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     113       K    15   18   19       C        2   4   7   9  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     114       S    15   18   19       C        2   7   8  10  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     115       S    15   18   19       H        5   7   8  10  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     116       H    15   18   19       H        5   7   8  10  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     117       S    15   18   19       H        5   7   8  10  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     118       R    15   18   19       H        5   7   8  10  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     119       G    15   18   19       C        5   7   8  10  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     120       S    15   18   19       C        1   6   8  10  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     121       A    15   18   19       E        5   7   8  10  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     122       I    15   18   19       E        5   7   8  10  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     123       D    15   18   19       E        5   7   8  10  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     124       L    15   18   19       E        5   7   8  10  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     125       T    15   18   19       E        2   5   7  10  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     126       L    12   18   19       E        1   2   5   8  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     127       Y     6   18   19       E        1   2   8  10  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     128       R     6   18   19       E        1   1   5  10  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     129       L     3   15   19       C        0   1   1   1   2   3   4   5   7   9  12  13  16  17  17  18  20  20  21  22  
 LCS     130       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     131       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     132       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     133       E     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     134       L     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     135       V     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     136       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     137       M     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     138       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     139       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     140       R     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     141       F     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     142       D     3    3   11       C        1   1   1   1   1   1   1   2   3   3   3   5   5   5  12  14  16  16  18  19  
 LCS     143       F     3    4   11       C        1   1   1   1   1   2   3   4   7   8  10  12  12  13  14  16  16  17  18  19  
 LCS     144       M     3    6   11       C        1   1   1   1   2   3   3   4   4   4   4  11  12  13  14  16  16  17  18  19  
 LCS     145       D     5    7   11       C        1   2   2   2   2   3   3   5   6   8  10  11  12  13  14  16  16  17  18  19  
 LCS     146       E     5    7   11       H        1   2   2   2   2   3   3   4   4   4   4   5   5   5   6  16  16  17  18  19  
 LCS     147       R     5    7   11       H        1   2   2   2   2   3   3   4   4   4   4   5   6   6   7  12  13  17  18  19  
 LCS     148       S     5    7   11       H        1   2   2   2   2   3   3   4   4   5   5  10  11  11  12  12  16  17  18  19  
 LCS     149       H     5    7   11       C        1   2   2   2   2   3   3   4   4   5   5   8   9  10  10  12  13  14  15  15  
 LCS     150       H     3    7   11       C        0   1   1   1   2   2   3   4   4   5  10  10  11  11  12  12  13  14  15  15  
 LCS     151       A     3    7   11       C        0   0   2   2   2   3   3   4   4   4   4   5   6  10  10  12  13  14  15  15  
 LCS     152       A     3    3   11       C        0   0   1   1   1   2   3   4   4   4   4   5   6   6   7   8   9  10  10  11  
 LCS     153       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     154       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     155       I     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     156       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     157       C     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     158       N     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     159       E     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     160       A     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     161       Q     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     162       N     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     163       R     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     164       R     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     165       R     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     166       L     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     167       R     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     168       S     0    0    9       H        0   0   0   0   0   1   1   1   1   2   2   3   4   5   5   5  10  10  12  12  
 LCS     169       I     3    3    9       H        0   1   1   1   1   2   3   3   3   3   3   5   6   6   6  17  18  18  19  20  
 LCS     170       M     3    5    9       H        0   1   1   1   2   3   3   3   6   6  12  13  16  17  17  18  20  20  21  22  
 LCS     171       E     4    5    9       H        0   1   1   1   2   3   3   3   8  10  12  15  16  17  17  18  20  20  21  22  
 LCS     172       N     4    5    9       C        1   1   1   1   2   3   3   5   6   8   9  10  13  16  17  18  20  20  21  22  
 LCS     173       S     4    5    9       C        1   1   3   3   3   4   5   6   6   8   9  10  12  13  14  18  19  20  21  22  
 LCS     174       G     4    5    9       C        1   1   3   3   3   4   5   6   6   8   9  10  12  14  14  18  19  20  21  22  
 LCS     175       F     3    5    9       E        1   1   1   1   2   3   5   6   6   7   9  10  11  13  14  18  19  20  21  22  
 LCS     176       E     3    5    9       E        1   1   1   1   3   4   5   6   6   8  10  12  12  14  17  18  19  20  21  22  
 LCS     177       A     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     178       Y     0    0    0       C        0   0   1   1   3   6   8  10  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     179       S     0    0    0       C        0   1   1   1   1   1   8   9   9  14  15  15  16  17  17  18  20  20  21  22  
 LCS     180       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     181       E     3    3    8       C        0   1   1   1   1   1   8   9   9  14  15  15  16  17  17  18  20  20  21  22  
 LCS     182       W     3    7    8       C        1   1   1   4   7  10  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     183       W     6    7    8       C        1   7   8  10  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     184       H     6    7    8       E        5   7   8  10  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     185       Y     6    7    8       E        5   7   8  10  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     186       V     6    7    8       E        5   7   8  10  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     187       L     6    7    8       E        1   2   8  10  10  11  11  11  12  14  15  15  16  17  17  18  20  20  21  22  
 LCS     188       R     6    7    8       C        1   1   2   2   2   3   5   8  11  12  12  14  15  16  17  17  18  18  19  20  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   1.55 
 
 NUMBER_OF_CA_Tg:  202      NUMBER_OF_CA_Pr:   84      PERCENT_OF_CA:  41.58  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max      12      15      18      21      22      23      24      24      26      30      31      32      33      35      36      38      41      42      44      46  
 GDT PERCENT_OF_CA_Pr   14.29   17.86   21.43   25.00   26.19   27.38   28.57   28.57   30.95   35.71   36.90   38.10   39.29   41.67   42.86   45.24   48.81   50.00   52.38   54.76 
 GDT PERCENT_OF_CA_Tg    5.94    7.43    8.91   10.40   10.89   11.39   11.88   11.88   12.87   14.85   15.35   15.84   16.34   17.33   17.82   18.81   20.30   20.79   21.78   22.77 
 GDT FRAGMENT: Beg-End  73-85  111-186 111-186 111-187 111-187 111-187 111-187 111-187 104-187 104-187 104-187 103-187 103-187 103-187 103-188  75-187  73-187  73-187  73-187  73-187 
 GDT RMS_LOCAL           0.26    0.50    0.79    1.10    1.17    1.28    1.64    1.64    2.86    3.31    3.42    3.65    3.83    4.16    4.31    4.95    5.43    5.57    5.90    6.20 
 GDT RMS_ALL_CA         27.36   19.48   19.56   19.60   19.63   19.71   19.60   19.60   18.71   18.39   18.37   18.19   18.21   18.15   18.27   17.61   17.11   17.02   17.05   17.04 
 
 
 TEST (CA)  RMS =  13.23               (Number of atoms:   84) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   13.23         84    41.6   202     CRMSCA  
     CRN = ALL/NP  . . . . .    0.1575                            CRMSCA  
     SECONDARY STRUCTURE . .   11.66         30    42.3    71     CRMSCA  
     SURFACE . . . . . . . .   14.30         39    39.0   100     CRMSCA  
     BURIED  . . . . . . . .   12.22         45    44.1   102     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   13.22        336    33.7   996     CRMSMC  
     SECONDARY STRUCTURE . .   11.70        120    34.0   353     CRMSMC  
     SURFACE . . . . . . . .   14.11        156    31.6   494     CRMSMC  
     BURIED  . . . . . . . .   12.39        180    35.9   502     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    0.00          0     0.0   842     CRMSSC  
     RELIABLE SIDE CHAINS  .    0.00          0     0.0   740     CRMSSC  
     SECONDARY STRUCTURE . .    0.00          0     0.0   302     CRMSSC  
     SURFACE . . . . . . . .    0.00          0     0.0   422     CRMSSC  
     BURIED  . . . . . . . .    0.00          0     0.0   420     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   13.22        336    20.4  1650     CRMSALL 
     SECONDARY STRUCTURE . .   11.70        120    20.5   586     CRMSALL 
     SURFACE . . . . . . . .   14.11        156    19.0   822     CRMSALL 
     BURIED  . . . . . . . .   12.39        180    21.7   828     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   12.307      1.000       0.500     84    41.6   202     ERRCA  
     SECONDARY STRUCTURE . .   10.902      1.000       0.500     30    42.3    71     ERRCA  
     SURFACE . . . . . . . .   13.300      1.000       0.500     39    39.0   100     ERRCA  
     BURIED  . . . . . . . .   11.446      1.000       0.500     45    44.1   102     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   12.276      1.000       0.500    336    33.7   996     ERRMC  
     SECONDARY STRUCTURE . .   10.907      1.000       0.500    120    34.0   353     ERRMC  
     SURFACE . . . . . . . .   13.073      1.000       0.500    156    31.6   494     ERRMC  
     BURIED  . . . . . . . .   11.585      1.000       0.500    180    35.9   502     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.000      0.000       0.000      0     0.0   842     ERRSC  
     RELIABLE SIDE CHAINS  .    0.000      0.000       0.000      0     0.0   740     ERRSC  
     SECONDARY STRUCTURE . .    0.000      0.000       0.000      0     0.0   302     ERRSC  
     SURFACE . . . . . . . .    0.000      0.000       0.000      0     0.0   422     ERRSC  
     BURIED  . . . . . . . .    0.000      0.000       0.000      0     0.0   420     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   12.276      1.000       0.500    336    20.4  1650     ERRALL 
     SECONDARY STRUCTURE . .   10.907      1.000       0.500    120    20.5   586     ERRALL 
     SURFACE . . . . . . . .   13.073      1.000       0.500    156    19.0   822     ERRALL 
     BURIED  . . . . . . . .   11.585      1.000       0.500    180    21.7   828     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         0         0         7        25      84     202   DISTCA 
CA  (P)      0.00      0.00      0.00      3.47     12.38             202   DISTCA 
CA  (RMS)    0.00      0.00      0.00      4.50      6.84                   DISTCA 
 
ALL (N)         0         0         0        27       107     336    1650   DISTALL 
ALL (P)      0.00      0.00      0.00      1.64      6.48            1650   DISTALL 
ALL (RMS)    0.00      0.00      0.00      4.33      7.04                   DISTALL 
 
 
 
 
END of the results output 
