 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
#          The number of residues in SS section: 85 , MODEL 85 , TARGET 257 
#          The number of residues possible to evaluate: 85 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP   170     R     E     C             1.00 
 SSP   171     V     E     E             1.00 
 SSP   172     G     E     E             1.00 
 SSP   173     A     E     E             1.00 
 SSP   174     V     C     E             1.00 
 SSP   175     E     C     E             1.00 
 SSP   176     S     C     E             1.00 
 SSP   177     Y     C     C             1.00 
 SSP   178     P     C     C             1.00 
 SSP   179     E     C     C             1.00 
 SSP   180     V     H     H             1.00 
 SSP   181     D     H     H             1.00 
 SSP   182     I     H     H             1.00 
 SSP   183     L     H     H             1.00 
 SSP   184     I     H     H             1.00 
 SSP   185     D     H     H             1.00 
 SSP   186     S     H     H             1.00 
 SSP   187     L     H     H             1.00 
 SSP   188     R     H     H             1.00 
 SSP   189     D     H     H             1.00 
 SSP   190     E     H     H             1.00 
 SSP   191     G     C     H             1.00 
 SSP   192     V     C     C             1.00 
 SSP   193     T     C     C             1.00 
 SSP   194     G     E     C             1.00 
 SSP   195     V     E     C             1.00 
 SSP   196     H     E     E             1.00 
 SSP   197     L     E     E             1.00 
 SSP   198     M     E     E             1.00 
 SSP   199     P     E     E             1.00 
 SSP   200     L     C     E             1.00 
 SSP   201     M     C     E             1.00 
 SSP   202     L     C     E             1.00 
 SSP   203     V     C     C             1.00 
 SSP   204     A     C     C             1.00 
 SSP   205     G     C     C             1.00 
 SSP   206     D     H     C             1.00 
 SSP   207     H     H     C             1.00 
 SSP   208     A     H     C             1.00 
 SSP   209     I     H     H             1.00 
 SSP   210     N     C     H             1.00 
 SSP   211     D     C     H             1.00 
 SSP   212     M     C     H             1.00 
 SSP   213     A     C     H             1.00 
 SSP   214     S     C     H             1.00 
 SSP  BREAK 
 SSP   218     D     C     H             1.00 
 SSP   219     S     C     H             1.00 
 SSP  BREAK 
 SSP   221     K     H     H             1.00 
 SSP   222     M     H     H             1.00 
 SSP   223     R     H     H             1.00 
 SSP   224     F     H     H             1.00 
 SSP   225     N     H     H             1.00 
 SSP   226     A     H     H             1.00 
 SSP   227     A     C     C             1.00 
 SSP   228     G     C     C             1.00 
 SSP   229     I     C     C             1.00 
 SSP   230     P     C     C             1.00 
 SSP   231     A     E     C             1.00 
 SSP   232     T     E     C             1.00 
 SSP   233     P     E     C             1.00 
 SSP   234     W     C     E             1.00 
 SSP   235     L     C     E             1.00 
 SSP   236     S     C     E             1.00 
 SSP   237     G     C     C             1.00 
 SSP   238     L     H     C             1.00 
 SSP   239     G     H     C             1.00 
 SSP   240     E     H     C             1.00 
 SSP   241     N     C     C             1.00 
 SSP   242     P     H     C             1.00 
 SSP   243     A     H     C             1.00 
 SSP   244     I     H     C             1.00 
 SSP   245     R     H     C             1.00 
 SSP   246     A     H     C             1.00 
 SSP   247     M     H     C             1.00 
 SSP   248     F     H     C             1.00 
 SSP   249     V     H     C             1.00 
 SSP   250     A     H     H             1.00 
 SSP   251     H     H     H             1.00 
 SSP   252     L     H     H             1.00 
 SSP   253     H     H     H             1.00 
 SSP   254     Q     H     C             1.00 
 SSP   255     A     H     C             1.00 
 SSP   256     L     H     C             1.00 
 SSP   257     N     H     C             1.00 
 SSP   258     M     C     C             1.00 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              51.8      55.0     53.8     46.9     33.1 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        53.4      59.7     57.9     43.8     33.1 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG            7              85.7               0.0 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00      85    100.0     51.8 
 
 BIN  0.00 - 1.00      1.00      85    100.0     51.8 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
# WARNING! The number of residues with CB atom coordinates: MODEL 0 , TARGET 241 
 
 ERROR! Check the common set of atoms between TARGET and MODEL 1702 1718 
# WARNING! TARGET 2018 atoms, MODEL 1734 atoms, 1702 common with TARGET 
           Number of atoms possible to evaluate: 340 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    62.44           62.8   164    32.0   512     ARMSMC  
     SECONDARY STRUCTURE . .    63.64           70.0    90    28.1   320     ARMSMC  
     SURFACE . . . . . . . .    60.21           65.8    76    29.7   256     ARMSMC  
     BURIED  . . . . . . . .    64.31           60.2    88    34.4   256     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   213     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   196     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   133     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   112     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   101     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   168     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   121     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   110     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    93     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    75     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    60     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    46     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    44     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    44     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    16     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    24     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    24     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    20     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    20     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     4     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1  170 - 214  45   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    18    176 - 193      4.30    15.78 
  LONGEST_CONTINUOUS_SEGMENT    18    177 - 194      4.62    18.32 
  LONGEST_CONTINUOUS_SEGMENT    18    182 - 199      4.91    12.12 
  LCS LOCAL_SCORE:             36.40 
 
 FRAGMENT  2  221 - 258  38   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    27    221 - 247      4.77    13.74 
  LCS LOCAL_SCORE:             64.75 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1  170 - 214  45   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    15    177 - 191      1.80    17.37 
  LONGEST_CONTINUOUS_SEGMENT    15    178 - 192      2.00    18.86 
  LCS LOCAL_SCORE:             22.32 
 
 FRAGMENT  2  221 - 258  38   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    10    221 - 230      1.28    22.62 
  LCS LOCAL_SCORE:             18.84 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1  170 - 214  45   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    13    179 - 191      0.51    19.35 
  LCS LOCAL_SCORE:             16.44 
 
 FRAGMENT  2  221 - 258  38   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     9    221 - 229      0.49    22.97 
  LCS LOCAL_SCORE:             15.10 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS     170       R     6    6    8       E        1   2   2   2   2   2   3   3   3   4   5   8  10  12  14  16  18  21  21  22  
 LCS     171       V     6    6    8       E        1   2   2   2   2   2   3   3   3   4   5   6  10  12  14  15  18  21  21  22  
 LCS     172       G     6    6    8       E        1   2   2   2   2   2   3   3   3   7   7   8  10  12  14  15  18  21  21  22  
 LCS     173       A     6    6   12       E        1   2   2   2   2   4   4   5   5   7   7   7  10  12  14  15  17  19  21  22  
 LCS     174       V     6    6   12       C        1   2   2   2   2   2   3   5   5   7   7   7  10  12  14  15  18  21  21  22  
 LCS     175       E     6    6   17       C        1   2   2   2   2   2   2   2   5   7   7   8  10  12  14  15  16  19  20  22  
 LCS     176       S     4    5   18       C        1   1   1   1   1   2   2   3   4   6   7   8  11  14  15  16  18  21  21  22  
 LCS     177       Y     4   15   18       C        1   1   1   1   3   5   5   5   5   6   7  12  14  14  15  15  18  20  21  22  
 LCS     178       P     4   15   18       C        1   1   1   5   5   5   5   5   6   7   7   8  10  10  15  15  17  20  21  22  
 LCS     179       E    13   15   18       C        2   4   5   5   5   5   5   7   9  13  13  15  15  17  18  19  20  20  21  22  
 LCS     180       V    13   15   18       H        1   4   5   5   5   7   8   9  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     181       D    13   15   18       H        4   4   5   5   5   5   5  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     182       I    13   15   18       H        4   4   5   5   5   5   5   7   8  10  13  15  15  17  18  19  20  21  21  22  
 LCS     183       L    13   15   18       H        4   4   5   5   5   5   5   8  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     184       I    13   15   18       H        4   4   5   5   5   7   8  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     185       D    13   15   18       H        4   4   5   5   5   5   5   5   5  10  11  15  15  17  18  19  20  21  21  22  
 LCS     186       S    13   15   18       H        4   4   5   5   5   5   5   5   5   6  11  15  15  17  18  19  20  21  21  22  
 LCS     187       L    13   15   18       H        4   4   5   5   6   7   8  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     188       R    13   15   18       H        4   4   5   5   5   6   8  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     189       D    13   15   18       H        4   4   5   5   5   5   5   5   5   5   7  13  15  17  18  19  20  20  21  22  
 LCS     190       E    13   15   18       H        4   4   5   5   5   5   5   5   5   9  13  15  15  17  18  19  20  21  21  22  
 LCS     191       G    13   15   18       C        4   4   5   5   6   7   8  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     192       V     4   15   18       C        1   1   1   1   3   3   5  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     193       T     4    8   18       C        1   1   1   1   3   3   3   4   5   6   9  10  14  16  18  19  20  20  21  22  
 LCS     194       G     6    8   18       E        1   2   2   2   3   3   3   3   4   5   6   7   8   8   9  10  13  17  19  22  
 LCS     195       V     6    8   18       E        1   2   2   2   3   3   3   4   5   6   6   7   8   8  11  13  17  20  21  22  
 LCS     196       H     6    8   18       E        1   2   2   2   3   3   3   4   5   6   6   7   8   9  11  13  17  20  21  22  
 LCS     197       L     6    8   18       E        1   2   2   2   3   3   3   4   5   6   6   7   8  13  15  17  18  21  21  22  
 LCS     198       M     6    8   18       E        1   2   2   2   3   3   3   4   5   6   6   8  10  13  15  16  18  21  21  22  
 LCS     199       P     6    8   18       E        0   2   2   2   3   3   3   3   5   6   6   7   8  12  15  16  18  21  21  22  
 LCS     200       L     4    8   16       C        1   1   1   2   3   3   3   3   4   5   5   6   7   8   9  15  18  21  21  22  
 LCS     201       M     4    8   16       C        1   1   1   1   3   3   3   3   4   5   5   6   8   8  13  17  18  21  21  22  
 LCS     202       L     5    7   16       C        1   1   2   2   2   3   3   3   4   5   5   5   6   7   8  10  11  12  21  22  
 LCS     203       V     5    7   16       C        1   1   2   2   2   3   3   3   4   5   5   6  15  16  18  19  20  21  21  22  
 LCS     204       A     5    7   16       C        1   1   2   4   6   7   8   8   9  12  13  14  15  17  18  19  20  21  21  22  
 LCS     205       G     5    7   16       C        1   1   2   2   2   3   3   4   5   6  10  12  13  15  16  17  18  21  21  22  
 LCS     206       D     5    7   16       H        1   1   2   2   2   3   3   3   4   5   7   7  12  15  16  17  18  21  21  22  
 LCS     207       H     5    8   16       H        1   1   3   5   6   7   8   8  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     208       A     5    8   16       H        1   1   2   2   2   7   8   8  10  12  13  15  15  17  18  19  20  21  21  22  
 LCS     209       I     5    8   16       H        1   1   3   4   6   7   8   8  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     210       N     5    8   16       C        1   1   3   4   6   7   8  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     211       D     5    8   16       C        1   1   1   4   6   7   8  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     212       M     5    8   16       C        1   1   3   5   6   7   8  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     213       A     5    8   16       C        1   3   3   5   6   7   8  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     214       S     4    8   16       C        1   1   3   5   6   7   8  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     215       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     216       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     217       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     218       D     0    0    0       C        0   0   0   3   4   5   6  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     219       S     0    0    0       C        0   1   1   1   4   5   6  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     220       W     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     221       K     9   10   27       H        3   3   3   5   6   7   8  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     222       M     9   10   27       H        3   3   3   5   6   7   8  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     223       R     9   10   27       H        3   3   3   5   6   7   8  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     224       F     9   10   27       H        3   3   3   5   6   7   8  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     225       N     9   10   27       H        3   3   3   5   6   7   8  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     226       A     9   10   27       H        3   3   3   5   6   7   8  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     227       A     9   10   27       C        3   3   3   5   6   7   8  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     228       G     9   10   27       C        3   3   3   5   6   7   8  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     229       I     9   10   27       C        1   3   3   5   6   7   8  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     230       P     4   10   27       C        1   1   1   3   4   4   7  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     231       A     6    7   27       E        1   2   2   2   2   3   4   4   5   7   8  11  14  16  18  19  20  21  21  22  
 LCS     232       T     6    7   27       E        1   2   2   2   3   4   7  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     233       P     6    7   27       E        1   2   2   3   4   4   7   9  11  12  13  15  15  17  18  19  20  21  21  22  
 LCS     234       W     6    7   27       C        1   2   2   2   2   3   6   9  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     235       L     6    7   27       C        1   2   2   2   3   5   7  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     236       S     6    7   27       C        1   2   2   2   2   3   4   6  10  13  13  15  15  17  18  19  20  21  21  22  
 LCS     237       G     5    7   27       C        1   1   1   1   3   5   7  10  11  13  13  15  15  17  18  19  20  21  21  22  
 LCS     238       L     5    7   27       H        1   1   1   1   5   5   7   8  10  13  13  15  15  17  18  19  20  21  21  22  
 LCS     239       G     5    7   27       H        1   1   1   1   2   3   4   5   7   9  12  13  15  17  18  19  20  20  21  22  
 LCS     240       E     4    6   27       H        1   1   1   1   1   2   3   5   7   7  10  13  15  17  18  19  20  20  21  22  
 LCS     241       N     4    6   27       C        1   1   1   1   1   2   3   5   7   7   9  10  15  17  18  19  20  20  21  22  
 LCS     242       P     4    6   27       H        1   1   1   1   2   2   4   5   8  10  12  14  15  17  18  19  20  20  21  22  
 LCS     243       A     4    6   27       H        1   1   1   1   1   2   2   3   4   5   8   9  10  12  15  19  20  20  21  22  
 LCS     244       I     3    6   27       H        0   1   1   1   2   2   2   2   4   5   8   9  10  17  18  19  20  20  21  22  
 LCS     245       R     3    6   27       H        0   1   1   1   2   2   2   5   7   7   9  10  10  14  15  19  20  20  21  22  
 LCS     246       A     3    3   27       H        0   1   1   1   2   3   4   4   5   7   8   9  10  12  12  13  15  18  20  22  
 LCS     247       M     3    3   27       H        0   1   1   1   2   3   4   5   7   7   9  10  10  12  12  13  15  19  20  22  
 LCS     248       F     3    7   26       H        1   1   1   1   1   2   3   3   5   5   7   7   8   8  10  12  15  18  20  22  
 LCS     249       V     6    7   18       H        1   2   2   2   2   2   3   3   4   4   5   5   6   7   7   8   8   9   9   9  
 LCS     250       A     6    7   18       H        1   2   2   2   2   2   3   3   4   4   5   5   6   7   7   8   8   8   9   9  
 LCS     251       H     6    7   18       H        1   2   2   2   2   2   3   3   4   4   5   5   6   7   7   8   8   9   9   9  
 LCS     252       L     6    7   18       H        1   2   2   2   2   2   3   3   4   4   5   5   6   7   7   7   8   8   8   8  
 LCS     253       H     6    7   18       H        1   2   2   2   2   2   3   3   4   4   5   5   6   7   7   7   8   8   8   8  
 LCS     254       Q     6    7   18       H        1   2   2   2   2   2   3   3   4   4   5   5   6   7   7   7   8   8   8   8  
 LCS     255       A     4    5   18       H        1   1   1   1   1   1   3   3   4   4   5   5   6   7   7   7   8   8   8   8  
 LCS     256       L     4    5   18       H        1   1   1   1   1   1   2   3   3   4   5   5   6   7   7   7   8   8   8   8  
 LCS     257       N     4    5   18       H        1   1   1   1   2   2   3   3   4   4   5   5   6   7   7   7   8   8   8   8  
 LCS     258       M     3    3   18       C        1   1   1   1   2   2   2   2   3   4   4   5   6   7   7   7   8   8   8   8  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   0.83 
 
 NUMBER_OF_CA_Tg:  257      NUMBER_OF_CA_Pr:   85      PERCENT_OF_CA:  33.07  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max      11      12      13      13      16      20      22      26      30      34      35      39      41      45      47      51      52      54      56      58  
 GDT PERCENT_OF_CA_Pr   12.94   14.12   15.29   15.29   18.82   23.53   25.88   30.59   35.29   40.00   41.18   45.88   48.24   52.94   55.29   60.00   61.18   63.53   65.88   68.24 
 GDT PERCENT_OF_CA_Tg    4.28    4.67    5.06    5.06    6.23    7.78    8.56   10.12   11.67   13.23   13.62   15.18   15.95   17.51   18.29   19.84   20.23   21.01   21.79   22.57 
 GDT FRAGMENT: Beg-End 181-191 179-191 179-191 179-191 191-229 180-229 180-229 181-237 180-237 179-238 179-238 179-238 179-238 179-242 179-244 179-245 179-245 170-238 170-238 170-238 
 GDT RMS_LOCAL           0.28    0.39    0.51    0.51    1.83    2.13    2.29    3.03    3.26    3.54    3.60    3.95    4.13    4.78    4.97    5.38    5.43    6.09    5.97    6.15 
 GDT RMS_ALL_CA         25.86   25.46   25.43   25.43   14.78   14.70   14.69   15.83   15.68   15.15   15.19   15.33   15.25   14.22   14.02   13.61   13.67   16.74   15.96   15.82 
 
 
 TEST (CA)  RMS =  11.87               (Number of atoms:   85) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   11.87         85    33.1   257     CRMSCA  
     CRN = ALL/NP  . . . . .    0.1396                            CRMSCA  
     SECONDARY STRUCTURE . .   12.48         46    28.8   160     CRMSCA  
     SURFACE . . . . . . . .   12.68         39    30.2   129     CRMSCA  
     BURIED  . . . . . . . .   11.13         46    35.9   128     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   11.86        340    26.8  1269     CRMSMC  
     SECONDARY STRUCTURE . .   12.54        184    23.1   796     CRMSMC  
     SURFACE . . . . . . . .   12.50        156    24.4   639     CRMSMC  
     BURIED  . . . . . . . .   11.28        184    29.2   630     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    0.00          0     0.0   990     CRMSSC  
     RELIABLE SIDE CHAINS  .    0.00          0     0.0   802     CRMSSC  
     SECONDARY STRUCTURE . .    0.00          0     0.0   651     CRMSSC  
     SURFACE . . . . . . . .    0.00          0     0.0   542     CRMSSC  
     BURIED  . . . . . . . .    0.00          0     0.0   448     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   11.86        340    16.8  2018     CRMSALL 
     SECONDARY STRUCTURE . .   12.54        184    14.3  1291     CRMSALL 
     SURFACE . . . . . . . .   12.50        156    14.7  1058     CRMSALL 
     BURIED  . . . . . . . .   11.28        184    19.2   960     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   10.633      1.000       0.500     85    33.1   257     ERRCA  
     SECONDARY STRUCTURE . .   11.223      1.000       0.500     46    28.8   160     ERRCA  
     SURFACE . . . . . . . .   11.220      1.000       0.500     39    30.2   129     ERRCA  
     BURIED  . . . . . . . .   10.136      1.000       0.500     46    35.9   128     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   10.546      1.000       0.500    340    26.8  1269     ERRMC  
     SECONDARY STRUCTURE . .   11.205      1.000       0.500    184    23.1   796     ERRMC  
     SURFACE . . . . . . . .   10.975      1.000       0.500    156    24.4   639     ERRMC  
     BURIED  . . . . . . . .   10.182      1.000       0.500    184    29.2   630     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.000      0.000       0.000      0     0.0   990     ERRSC  
     RELIABLE SIDE CHAINS  .    0.000      0.000       0.000      0     0.0   802     ERRSC  
     SECONDARY STRUCTURE . .    0.000      0.000       0.000      0     0.0   651     ERRSC  
     SURFACE . . . . . . . .    0.000      0.000       0.000      0     0.0   542     ERRSC  
     BURIED  . . . . . . . .    0.000      0.000       0.000      0     0.0   448     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   10.546      1.000       0.500    340    16.8  2018     ERRALL 
     SECONDARY STRUCTURE . .   11.205      1.000       0.500    184    14.3  1291     ERRALL 
     SURFACE . . . . . . . .   10.975      1.000       0.500    156    14.7  1058     ERRALL 
     BURIED  . . . . . . . .   10.182      1.000       0.500    184    19.2   960     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         0         0         9        45      85     257   DISTCA 
CA  (P)      0.00      0.00      0.00      3.50     17.51             257   DISTCA 
CA  (RMS)    0.00      0.00      0.00      3.75      7.23                   DISTCA 
 
ALL (N)         0         2         6        41       181     340    2018   DISTALL 
ALL (P)      0.00      0.10      0.30      2.03      8.97            2018   DISTALL 
ALL (RMS)    0.00      1.75      2.30      3.83      7.16                   DISTALL 
 
 
 
 
END of the results output 
