 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
#          The number of residues in SS section: 115 , MODEL 115 , TARGET 378 
#          The number of residues possible to evaluate: 115 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP   269     A     C     C             1.00 
 SSP   270     Y     C     C             1.00 
 SSP   271     P     C     C             1.00 
 SSP   272     S     C     H             1.00 
 SSP   273     G     C     H             1.00 
 SSP   274     G     C     H             1.00 
 SSP   275     A     C     C             1.00 
 SSP   276     G     C     C             1.00 
 SSP   277     M     C     C             1.00 
 SSP   278     Y     E     C             1.00 
 SSP   279     G     E     C             1.00 
 SSP   280     S     C     C             1.00 
 SSP   281     A     H     H             1.00 
 SSP   282     D     H     H             1.00 
 SSP   283     D     H     H             1.00 
 SSP   284     V     H     H             1.00 
 SSP   285     L     H     H             1.00 
 SSP   286     R     H     H             1.00 
 SSP   287     A     H     H             1.00 
 SSP   288     L     H     H             1.00 
 SSP   289     E     H     H             1.00 
 SSP   290     A     H     H             1.00 
 SSP   291     I     H     H             1.00 
 SSP   292     R     H     H             1.00 
 SSP   293     A     H     C             1.00 
 SSP   294     N     C     C             1.00 
 SSP   295     P     C     C             1.00 
 SSP   296     G     C     C             1.00 
 SSP   297     F     C     C             1.00 
 SSP   298     L     C     C             1.00 
 SSP   299     P     C     H             1.00 
 SSP   300     E     H     H             1.00 
 SSP   301     T     H     H             1.00 
 SSP   302     L     H     H             1.00 
 SSP   303     A     H     H             1.00 
 SSP   304     D     H     H             1.00 
 SSP   305     A     H     H             1.00 
 SSP   306     A     H     C             1.00 
 SSP   307     R     H     C             1.00 
 SSP   308     R     C     C             1.00 
 SSP   309     D     C     E             1.00 
 SSP   310     Q     C     E             1.00 
 SSP   311     A     C     C             1.00 
 SSP   312     G     C     C             1.00 
 SSP  BREAK 
 SSP   318     R     C     C             1.00 
 SSP   319     G     C     C             1.00 
 SSP   320     P     C     E             1.00 
 SSP   321     G     C     E             1.00 
 SSP   322     W     E     E             1.00 
 SSP   323     G     E     C             1.00 
 SSP   324     F     E     C             1.00 
 SSP   325     G     C     C             1.00 
 SSP   326     Y     C     C             1.00 
 SSP   327     L     C     E             1.00 
 SSP   328     S     C     E             1.00 
 SSP   329     A     E     E             1.00 
 SSP   330     V     E     E             1.00 
 SSP   331     L     E     C             1.00 
 SSP  BREAK 
 SSP   334     P     H     C             1.00 
 SSP   335     A     H     C             1.00 
 SSP   336     A     H     C             1.00 
 SSP   337     A     H     C             1.00 
 SSP   338     G     C     E             1.00 
 SSP   339     T     C     E             1.00 
 SSP   340     P     C     E             1.00 
 SSP   341     Q     C     E             1.00 
 SSP   342     H     C     E             1.00 
 SSP   343     A     C     E             1.00 
 SSP   344     G     C     E             1.00 
 SSP   345     T     C     E             1.00 
 SSP   346     L     E     E             1.00 
 SSP   347     Q     E     C             1.00 
 SSP  BREAK 
 SSP   350     G     E     C             1.00 
 SSP   351     V     C     E             1.00 
 SSP   352     Y     C     E             1.00 
 SSP   353     G     C     E             1.00 
 SSP   354     H     E     E             1.00 
 SSP   355     S     E     E             1.00 
 SSP   356     W     E     E             1.00 
 SSP   357     F     E     E             1.00 
 SSP   358     V     E     C             1.00 
 SSP   359     D     E     C             1.00 
 SSP   360     R     C     C             1.00 
 SSP   361     A     C     C             1.00 
 SSP   362     L     C     C             1.00 
 SSP   363     G     C     C             1.00 
 SSP   364     L     E     E             1.00 
 SSP   365     S     E     E             1.00 
 SSP   366     V     E     E             1.00 
 SSP   367     L     E     E             1.00 
 SSP   368     L     E     E             1.00 
 SSP   369     L     E     E             1.00 
 SSP   370     T     E     C             1.00 
 SSP   371     N     C     C             1.00 
 SSP   372     T     E     C             1.00 
 SSP   373     A     E     C             1.00 
 SSP   374     Y     C     C             1.00 
 SSP   375     E     H     H             1.00 
 SSP   376     G     H     H             1.00 
 SSP   377     M     H     H             1.00 
 SSP   378     S     H     H             1.00 
 SSP   379     G     C     H             1.00 
 SSP   380     P     H     H             1.00 
 SSP   381     L     H     H             1.00 
 SSP   382     T     H     C             1.00 
 SSP   383     I     H     H             1.00 
 SSP   384     A     H     H             1.00 
 SSP   385     L     H     H             1.00 
 SSP   386     R     H     H             1.00 
 SSP   387     D     H     H             1.00 
 SSP   388     A     H     H             1.00 
 SSP   389     V     H     H             1.00 
 SSP   390     Y     C     C             1.00 
 SSP   391     A     C     C             1.00 
 SSP   392     R     C     C             1.00 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              63.5      79.5     53.8     56.0     30.4 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        60.7      75.7     57.9     50.3     30.4 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG           12              75.0               0.0 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            1                 1 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00     115    100.0     63.5 
 
 BIN  0.00 - 1.00      1.00     115    100.0     63.5 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
# WARNING! The number of residues with CB atom coordinates: MODEL 0 , TARGET 336 
 
# WARNING! TARGET 2840 atoms, MODEL 2565 atoms, 2466 common with TARGET 
           Number of atoms possible to evaluate: 460 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    69.02           55.9   222    29.4   754     ARMSMC  
     SECONDARY STRUCTURE . .    33.12           81.6   103    33.2   310     ARMSMC  
     SURFACE . . . . . . . .    77.12           50.0    68    20.6   330     ARMSMC  
     BURIED  . . . . . . . .    65.12           58.4   154    36.3   424     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   278     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   249     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   116     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   119     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   159     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   216     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   157     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    88     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   106     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   110     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    69     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    60     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    25     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    51     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    18     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    35     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    35     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    16     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    28     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     7     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1  269 - 312  44   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    44    269 - 312      3.19     3.19 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2  318 - 331  14   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    12    318 - 329      4.99     6.39 
  LCS LOCAL_SCORE:             81.12 
 
 FRAGMENT  3  334 - 347  14   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    11    334 - 344      4.93     8.62 
  LCS LOCAL_SCORE:             76.53 
 
 FRAGMENT  4  350 - 392  43   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    43    350 - 392      4.21     4.21 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1  269 - 312  44   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    29    272 - 300      1.98     3.59 
  LCS LOCAL_SCORE:             53.51 
 
 FRAGMENT  2  318 - 331  14   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    320 - 324      1.51     9.50 
  LONGEST_CONTINUOUS_SEGMENT     5    321 - 325      1.38    10.04 
  LONGEST_CONTINUOUS_SEGMENT     5    327 - 331      1.61    10.83 
  LCS LOCAL_SCORE:             34.18 
 
 FRAGMENT  3  334 - 347  14   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7    338 - 344      1.56     8.54 
  LCS LOCAL_SCORE:             42.35 
 
 FRAGMENT  4  350 - 392  43   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    15    378 - 392      1.86     9.53 
  LCS LOCAL_SCORE:             26.66 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1  269 - 312  44   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    23    272 - 294      0.72     4.51 
  LCS LOCAL_SCORE:             33.78 
 
 FRAGMENT  2  318 - 331  14   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    318 - 321      0.71    15.12 
  LONGEST_CONTINUOUS_SEGMENT     4    328 - 331      0.20    11.11 
  LCS LOCAL_SCORE:             27.04 
 
 FRAGMENT  3  334 - 347  14   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    339 - 343      0.86     8.91 
  LONGEST_CONTINUOUS_SEGMENT     5    340 - 344      0.78     8.71 
  LCS LOCAL_SCORE:             30.61 
 
 FRAGMENT  4  350 - 392  43   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     9    381 - 389      0.94    11.37 
  LONGEST_CONTINUOUS_SEGMENT     9    382 - 390      0.83    11.54 
  LCS LOCAL_SCORE:             15.36 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS     269       A     3   26   44       C        0   0   0   4   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     270       Y     4   26   44       C        0   1   3   5   5   6   7   9  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     271       P     4   26   44       C        0   1   3   5   5   6   7   9  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     272       S    23   29   44       C        1   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     273       G    23   29   44       C        1   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     274       G    23   29   44       C        1   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     275       A    23   29   44       C        2   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     276       G    23   29   44       C        2   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     277       M    23   29   44       C        3   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     278       Y    23   29   44       E        3   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     279       G    23   29   44       E        3   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     280       S    23   29   44       C        3   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     281       A    23   29   44       H        3   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     282       D    23   29   44       H        3   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     283       D    23   29   44       H        3   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     284       V    23   29   44       H        3   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     285       L    23   29   44       H        3   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     286       R    23   29   44       H        3   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     287       A    23   29   44       H        3   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     288       L    23   29   44       H        3   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     289       E    23   29   44       H        3   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     290       A    23   29   44       H        3   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     291       I    23   29   44       H        2   5   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     292       R    23   29   44       H        2   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     293       A    23   29   44       H        2   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     294       N    23   29   44       C        1   5   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     295       P     4   29   44       C        0   1   2   5   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     296       G     3   29   44       C        0   0   1   1   1   4   4   6  13  18  21  22  24  24  26  26  26  27  27  28  
 LCS     297       F     4   29   44       C        0   1   1   4   6   9  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     298       L     4   29   44       C        0   1   1   1   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     299       P     9   29   44       C        2   3   3   5   6  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     300       E     9   29   44       H        2   2   2   4   6   9  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     301       T     9   11   44       H        2   2   2   3   4   6  10  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     302       L     9   11   44       H        2   2   2   2   2   3  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     303       A     9   11   44       H        2   2   2   2   2   6  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     304       D     9   11   44       H        2   2   2   2   2   3   8  12  15  18  21  22  24  24  26  26  26  27  27  28  
 LCS     305       A     9   11   44       H        2   2   2   3   4   8  10  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     306       A     9   11   44       H        2   2   3   5   7  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     307       R     9   11   44       H        2   2   2   2   2   3   3   6  13  15  19  22  24  24  26  26  26  27  27  28  
 LCS     308       R     4   11   44       C        0   0   3   4   5   7   8  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     309       D     4   11   44       C        0   1   3   4   4   7   8  13  15  18  21  22  24  24  26  26  26  27  27  28  
 LCS     310       Q     4    6   44       C        0   0   1   3   5   5   7   8   9  10  11  13  24  24  25  26  26  27  27  28  
 LCS     311       A     3    6   44       C        0   0   0   2   3   5   7   8  10  10  11  13  24  24  26  26  26  27  27  28  
 LCS     312       G     3    6   44       C        0   0   0   1   1   1   2   8  10  10  11  13  16  17  19  26  26  27  27  28  
 LCS     313       V     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     314       G     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     315       A     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     316       E     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     317       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     318       R     4    4   12       C        0   0   1   1   1   1   2   3   3   3  15  17  20  24  26  26  26  27  27  28  
 LCS     319       G     4    4   12       C        0   0   1   1   2   6   7  10  12  18  21  22  24  24  26  26  26  27  27  28  
 LCS     320       P     4    5   12       C        0   0   1   1   1   1   1   1   2   2   3  22  23  24  26  26  26  27  27  28  
 LCS     321       G     4    5   12       C        1   1   1   1   3   4   4   5   5  14  18  20  23  24  26  26  26  27  27  28  
 LCS     322       W     4    5   12       E        1   1   1   2   3   4   6   9  12  15  18  21  23  24  26  26  26  27  27  28  
 LCS     323       G     4    5   12       E        1   1   1   2   3   4   4  10  12  15  17  20  23  24  26  26  26  27  27  28  
 LCS     324       F     4    5   12       E        1   1   1   1   5   6   7   9  12  15  18  21  23  24  26  26  26  27  27  28  
 LCS     325       G     3    5   12       C        0   0   0   1   1   1   1  11  13  16  20  22  23  24  26  26  26  27  27  28  
 LCS     326       Y     3    4   12       C        0   0   0   2   3   4   4   8  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     327       L     3    5   12       C        0   0   1   1   1   5   7   8   8  18  21  22  24  24  26  26  26  27  27  28  
 LCS     328       S     4    5   12       C        1   1   1   2   3   3   7   9  12  18  21  22  24  24  26  26  26  27  27  28  
 LCS     329       A     4    5   12       E        1   1   1   2   3   4   4   6  12  18  21  22  24  24  26  26  26  27  27  28  
 LCS     330       V     4    5    8       E        1   1   1   1   1   2   3   4   6   8   9  14  24  24  26  26  26  27  27  28  
 LCS     331       L     4    5    7       E        1   1   1   1   2   2   3   4   6   7   8  10  24  24  26  26  26  27  27  28  
 LCS     332       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     333       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     334       P     3    4   11       H        0   0   0   1   1   1   1   2  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     335       A     3    5   11       H        0   0   0   0   1   1   1   2   2   2   2   2  24  24  26  26  26  27  27  28  
 LCS     336       A     4    5   11       H        0   0   1   1   1   1   1   2   2   2   2  15  18  21  23  23  26  27  27  28  
 LCS     337       A     4    5   11       H        0   0   1   1   1   1   1   1   1   5   7  10  18  21  23  23  24  26  27  28  
 LCS     338       G     4    7   11       C        0   0   1   1   1   1   1   1   1   2   3   6  17  18  19  23  24  26  26  27  
 LCS     339       T     5    7   11       C        0   0   1   1   1   1   1   1   1   2   2   6   6  18  19  20  24  26  27  28  
 LCS     340       P     5    7   11       C        1   1   1   1   1   1   1   1   1   5   5   6   6   7   8   9  10  11  20  20  
 LCS     341       Q     5    7   11       C        1   1   1   1   1   1   1   1   4   5   5   6   6   7   9  10  19  19  20  20  
 LCS     342       H     5    7   11       C        1   1   1   1   1   1   1   1   1   2   2   3   4   5   5   9  10  11  12  14  
 LCS     343       A     5    7   11       C        1   1   1   1   1   1   1   1   1   2   2   2   4   5   5   5   6   6   6   7  
 LCS     344       G     5    7   11       C        0   1   1   1   1   1   1   1   1   2   2   2   2   5   5   5   6   6   6   7  
 LCS     345       T     4    5   10       C        0   0   1   1   1   1   1   1   1   2   2   2   2   5   5   5   6   6   6   7  
 LCS     346       L     4    5   10       E        0   0   1   1   1   1   1   1   1   1   2   2   2   2   3   3   4   4   5   6  
 LCS     347       Q     4    5    9       E        0   0   1   1   1   1   1   1   1   1   1   2   2   2   3   3   4   4   5   6  
 LCS     348       W     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     349       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     350       G     3    3   43       E        0   0   0   0   1   1   1   2   4   5   5   6   7   8  19  20  26  27  27  28  
 LCS     351       V     3    5   43       C        0   0   0   0   5   8  10  12  15  18  20  22  24  24  26  26  26  27  27  28  
 LCS     352       Y     7    9   43       C        0   0   1   2   7   9  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     353       G     7    9   43       C        1   1   1   2   2   7  10  12  15  18  21  22  24  24  26  26  26  27  27  28  
 LCS     354       H     7    9   43       E        1   1   1   2   6   9  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     355       S     7    9   43       E        1   1   1   2   2   6   8  12  15  18  21  22  24  24  26  26  26  27  27  28  
 LCS     356       W     7    9   43       E        1   1   1   5   8   9  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     357       F     7    9   43       E        1   1   1   2   4   6   8  12  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     358       V     7    9   43       E        1   1   3   5   6   9  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     359       D     7    9   43       E        0   1   1   2   2   7  10  12  15  18  21  22  24  24  26  26  26  27  27  28  
 LCS     360       R     3    9   43       C        0   0   1   2   4   6  10  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     361       A     3   12   43       C        0   0   1   2   3   5   6   7   8  10  12  15  18  24  26  26  26  27  27  28  
 LCS     362       L     4   12   43       C        0   0   1   1   3   5   6  10  12  12  20  22  24  24  26  26  26  27  27  28  
 LCS     363       G     8   12   43       C        1   2   2   2   3   5   6  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     364       L     8   12   43       E        1   2   2   2   3   5  10  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     365       S     8   12   43       E        1   2   2   2   3   5   7  12  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     366       V     8   12   43       E        1   2   2   2   3   5   9  12  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     367       L     8   12   43       E        1   2   2   3   5   5   7  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     368       L     8   12   43       E        1   2   2   2   5   5  10  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     369       L     8   12   43       E        1   2   2   2   3   5   6   7   8  12  21  22  24  24  26  26  26  27  27  28  
 LCS     370       T     8   12   43       E        1   2   2   2   4   5  10  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     371       N     3   12   43       C        0   0   1   2   3   6   8  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     372       T     3   12   43       E        0   0   4   5   5   6   8  10  13  17  21  22  24  24  26  26  26  27  27  28  
 LCS     373       A     3    7   43       E        0   1   1   2   3   5   6  10  13  18  21  22  24  24  26  26  26  27  27  28  
 LCS     374       Y     5    7   43       C        1   1   1   2   3   5   9  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     375       E     5    7   43       H        1   1   1   1   3   4   6  10  13  16  19  22  23  24  26  26  26  27  27  28  
 LCS     376       G     5    7   43       H        1   1   1   1   1   1   2   2   3   4   4   9  18  21  23  23  26  27  27  28  
 LCS     377       M     5    7   43       H        1   1   1   1   1   1   2   3   6   7  11  22  24  24  26  26  26  27  27  28  
 LCS     378       S     5   15   43       H        1   1   4   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     379       G     6   15   43       C        1   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     380       P     6   15   43       H        1   1   6   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     381       L     9   15   43       H        1   1   2   3   7   8  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     382       T     9   15   43       H        1   6   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     383       I     9   15   43       H        1   3   6   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     384       A     9   15   43       H        1   2   2   3   3   3   4   5  15  18  21  22  24  24  26  26  26  27  27  28  
 LCS     385       L     9   15   43       H        1   2   2   3   5   7   8  11  14  18  21  22  24  24  26  26  26  27  27  28  
 LCS     386       R     9   15   43       H        2   3   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     387       D     9   15   43       H        1   2   2   4   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     388       A     9   15   43       H        1   2   2   3   3   3   5   6  15  18  21  22  24  24  26  26  26  27  27  28  
 LCS     389       V     9   15   43       H        1   2   2   3   5   9  11  13  15  18  21  22  24  24  26  26  26  27  27  28  
 LCS     390       Y     9   15   43       C        1   5   7   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     391       A     6   15   43       C        1   1   4   7   8  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS     392       R     6   15   43       C        0   1   1   2   7  10  11  13  16  18  21  22  24  24  26  26  26  27  27  28  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   0.74 
 
 NUMBER_OF_CA_Tg:  378      NUMBER_OF_CA_Pr:  115      PERCENT_OF_CA:  30.42  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max      13      23      27      30      32      38      45      52      61      71      82      85      91      94      99     100     102     104     105     106  
 GDT PERCENT_OF_CA_Pr   11.30   20.00   23.48   26.09   27.83   33.04   39.13   45.22   53.04   61.74   71.30   73.91   79.13   81.74   86.09   86.96   88.70   90.43   91.30   92.17 
 GDT PERCENT_OF_CA_Tg    3.44    6.08    7.14    7.94    8.47   10.05   11.90   13.76   16.14   18.78   21.69   22.49   24.07   24.87   26.19   26.46   26.98   27.51   27.78   28.04 
 GDT FRAGMENT: Beg-End 278-290 272-382 272-390 272-391 272-391 269-392 269-391 269-392 269-392 269-392 269-392 269-392 269-392 269-392 269-392 269-392 269-392 269-392 269-392 269-392 
 GDT RMS_LOCAL           0.38    0.69    0.82    1.17    1.35    1.92    2.20    2.69    3.04    3.36    3.70    3.80    4.05    4.17    4.44    4.48    4.59    4.72    4.79    4.87 
 GDT RMS_ALL_CA          7.57    7.26    7.15    6.98    6.94    6.88    6.96    6.77    6.80    6.76    6.76    6.75    6.76    6.76    6.67    6.67    6.66    6.65    6.66    6.65 
 
 
 TEST (CA)  RMS =   6.55               (Number of atoms:  115) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    6.55        115    30.4   378     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0570                            CRMSCA  
     SECONDARY STRUCTURE . .    5.77         53    34.2   155     CRMSCA  
     SURFACE . . . . . . . .    7.25         36    21.7   166     CRMSCA  
     BURIED  . . . . . . . .    6.21         79    37.3   212     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    6.45        460    24.9  1848     CRMSMC  
     SECONDARY STRUCTURE . .    5.68        212    27.6   769     CRMSMC  
     SURFACE . . . . . . . .    7.14        144    17.8   809     CRMSMC  
     BURIED  . . . . . . . .    6.11        316    30.4  1039     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    0.00          0     0.0  1328     CRMSSC  
     RELIABLE SIDE CHAINS  .    0.00          0     0.0  1118     CRMSSC  
     SECONDARY STRUCTURE . .    0.00          0     0.0   560     CRMSSC  
     SURFACE . . . . . . . .    0.00          0     0.0   583     CRMSSC  
     BURIED  . . . . . . . .    0.00          0     0.0   745     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    6.45        460    16.2  2840     CRMSALL 
     SECONDARY STRUCTURE . .    5.68        212    18.0  1180     CRMSALL 
     SURFACE . . . . . . . .    7.14        144    11.5  1247     CRMSALL 
     BURIED  . . . . . . . .    6.11        316    19.8  1593     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.487      1.000       0.500    115    30.4   378     ERRCA  
     SECONDARY STRUCTURE . .    4.792      1.000       0.500     53    34.2   155     ERRCA  
     SURFACE . . . . . . . .    5.961      1.000       0.500     36    21.7   166     ERRCA  
     BURIED  . . . . . . . .    5.271      1.000       0.500     79    37.3   212     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.358      1.000       0.500    460    24.9  1848     ERRMC  
     SECONDARY STRUCTURE . .    4.700      1.000       0.500    212    27.6   769     ERRMC  
     SURFACE . . . . . . . .    5.857      1.000       0.500    144    17.8   809     ERRMC  
     BURIED  . . . . . . . .    5.130      1.000       0.500    316    30.4  1039     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.000      0.000       0.000      0     0.0  1328     ERRSC  
     RELIABLE SIDE CHAINS  .    0.000      0.000       0.000      0     0.0  1118     ERRSC  
     SECONDARY STRUCTURE . .    0.000      0.000       0.000      0     0.0   560     ERRSC  
     SURFACE . . . . . . . .    0.000      0.000       0.000      0     0.0   583     ERRSC  
     BURIED  . . . . . . . .    0.000      0.000       0.000      0     0.0   745     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.358      1.000       0.500    460    16.2  2840     ERRALL 
     SECONDARY STRUCTURE . .    4.700      1.000       0.500    212    18.0  1180     ERRALL 
     SURFACE . . . . . . . .    5.857      1.000       0.500    144    11.5  1247     ERRALL 
     BURIED  . . . . . . . .    5.130      1.000       0.500    316    19.8  1593     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         6        21        63       106     115     378   DISTCA 
CA  (P)      0.00      1.59      5.56     16.67     28.04             378   DISTCA 
CA  (RMS)    0.00      1.58      2.34      3.49      5.00                   DISTCA 
 
ALL (N)         1        23        97       274       421     460    2840   DISTALL 
ALL (P)      0.04      0.81      3.42      9.65     14.82            2840   DISTALL 
ALL (RMS)    0.96      1.66      2.37      3.48      4.81                   DISTALL 
 
 
 
 
END of the results output 
