 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
# WARNING! The number of residues in SS section: 97 , MODEL 97 , TARGET 116 
#          The number of residues possible to evaluate: 97 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP    17     P     C     C             1.00 
 SSP    18     H     C     C             1.00 
 SSP    19     V     C     C             1.00 
 SSP    20     S     C     C             1.00 
 SSP    21     D     C     C             1.00 
 SSP    22     E     C     C             1.00 
 SSP    23     E     C     H             1.00 
 SSP    24     L     H     H             1.00 
 SSP    25     P     H     H             1.00 
 SSP    26     V     H     H             1.00 
 SSP    27     L     H     H             1.00 
 SSP    28     L     H     H             1.00 
 SSP    29     R     C     H             1.00 
 SSP    30     Q     C     H             1.00 
 SSP    31     I     C     C             1.00 
 SSP    32     P     C     C             1.00 
 SSP    33     D     C     C             1.00 
 SSP    34     W     C     C             1.00 
 SSP    35     N     E     E             1.00 
 SSP    36     I     E     E             1.00 
 SSP    37     E     E     C             1.00 
 SSP    38     V     E     C             1.00 
 SSP    39     R     E     C             1.00 
 SSP    40     D     C     C             1.00 
 SSP    41     G     C     C             1.00 
 SSP    42     I     E     C             1.00 
 SSP  BREAK 
 SSP    45     L     E     E             1.00 
 SSP    46     E     E     E             1.00 
 SSP    47     K     E     E             1.00 
 SSP    48     V     E     E             1.00 
 SSP    49     Y     E     E             1.00 
 SSP    50     L     E     E             1.00 
 SSP    51     F     E     C             1.00 
 SSP    52     K     C     C             1.00 
 SSP    53     N     C     C             1.00 
 SSP    54     F     H     H             1.00 
 SSP    55     K     H     H             1.00 
 SSP    56     H     H     H             1.00 
 SSP    57     A     H     H             1.00 
 SSP    58     L     H     H             1.00 
 SSP    59     A     H     H             1.00 
 SSP    60     F     H     H             1.00 
 SSP    61     T     H     H             1.00 
 SSP    62     N     H     H             1.00 
 SSP    63     A     H     H             1.00 
 SSP    64     V     H     H             1.00 
 SSP    65     G     H     H             1.00 
 SSP    66     E     H     H             1.00 
 SSP    67     I     H     H             1.00 
 SSP    68     S     H     H             1.00 
 SSP    69     E     H     H             1.00 
 SSP    70     A     H     H             1.00 
 SSP    71     E     H     H             1.00 
 SSP    72     G     C     C             1.00 
 SSP    73     H     C     C             1.00 
 SSP    74     H     C     C             1.00 
 SSP    75     P     C     C             1.00 
 SSP    76     G     E     E             1.00 
 SSP    77     L     E     E             1.00 
 SSP    78     L     E     E             1.00 
 SSP    79     T     E     E             1.00 
 SSP    80     E     E     E             1.00 
 SSP    81     W     C     C             1.00 
 SSP    82     G     C     C             1.00 
 SSP    83     K     E     E             1.00 
 SSP    84     V     E     E             1.00 
 SSP    85     T     E     E             1.00 
 SSP    86     V     E     E             1.00 
 SSP    87     T     E     E             1.00 
 SSP    88     W     E     E             1.00 
 SSP    89     W     C     C             1.00 
 SSP    90     S     E     E             1.00 
 SSP    91     H     C     C             1.00 
 SSP    92     S     C     C             1.00 
 SSP    93     I     C     C             1.00 
 SSP    94     K     C     C             1.00 
 SSP    95     G     E     E             1.00 
 SSP    96     L     C     C             1.00 
 SSP    97     H     C     C             1.00 
 SSP    98     R     H     H             1.00 
 SSP    99     N     H     H             1.00 
 SSP   100     D     H     H             1.00 
 SSP   101     F     H     H             1.00 
 SSP   102     I     H     H             1.00 
 SSP   103     M     H     H             1.00 
 SSP   104     A     H     H             1.00 
 SSP   105     A     H     H             1.00 
 SSP   106     R     H     H             1.00 
 SSP   107     T     H     H             1.00 
 SSP   108     D     H     H             1.00 
 SSP   109     E     H     H             1.00 
 SSP   110     V     H     H             1.00 
 SSP   111     A     H     H             1.00 
 SSP   112     K     H     H             1.00 
 SSP   113     T     C     C             1.00 
 SSP   114     A     C     C             1.00 
 SSP   115     E     C     C             1.00 
 SSP  BREAK 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              91.8     100.0     80.8     90.9     83.6 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        95.2      98.4     88.5     97.0     83.6 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG            7             100.0               0.0 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00      97    100.0     91.8 
 
 BIN  0.00 - 1.00      1.00      97    100.0     91.8 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
 
 CONSIDERED - explicitly provided contacts (with positive confidence) or 
              non contacts (with negative confidence) possible to evaluate 
 SEP      - Minimum separation between residues considered 
 NPC      - Number of contacts predicted correctly 
 PC(P)    - Percent of contacts predicted correctly from CONSIDERED in PREDICTION 
 PC(T)    - Percent of contacts predicted correctly from CONSIDERED in TARGET with SEP limit 
 PC(TT)   - Percent of contacts predicted correctly from TOTAL in TARGET with SEP limit 
 
                        CONSIDERED     CONSIDERED       TOTAL          TOTAL 
                      in PREDICTION    in TARGET    in PREDICTION    in TARGET 
 ALL RESIDUES USED          97              97            97            116 
 ALL CONTACTS (< 8.0A)     449             439           449            544 
 
               in PREDICTION      Predicted correctly          Submitted as        in TARGET 
                CONSIDERED     NPC   PC(P)   PC(T)   PC(TT)    NOT  predicted   CONSIDERED  TOTAL  |   SEP 
 RES CONTACTS       449        400   89.09   91.12   73.53       0     0.00         439       544  |   1-9999 
 RES CONTACTS       276        261   94.57   96.31   83.39       0     0.00         271       313  |   1-4    
 RES CONTACTS        31         25   80.65   89.29   67.57       0     0.00          28        37  |   5-8    
 RES CONTACTS       142        114   80.28   81.43   58.76       0     0.00         140       194  |   9-9999 
 
 
 
# WARNING! TARGET 923 atoms, MODEL 938 atoms, 923 common with TARGET 
           Number of atoms possible to evaluate: 783 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    37.89           82.1   190    82.6   230     ARMSMC  
     SECONDARY STRUCTURE . .    24.14           92.0   112    94.9   118     ARMSMC  
     SURFACE . . . . . . . .    45.02           72.6   106    77.9   136     ARMSMC  
     BURIED  . . . . . . . .    26.28           94.0    84    89.4    94     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    67.01           66.3    83    86.5    96     ARMSSC1 
     RELIABLE SIDE CHAINS  .    67.20           64.0    75    85.2    88     ARMSSC1 
     SECONDARY STRUCTURE . .    64.67           70.8    48    96.0    50     ARMSSC1 
     SURFACE . . . . . . . .    68.38           63.0    46    80.7    57     ARMSSC1 
     BURIED  . . . . . . . .    65.27           70.3    37    94.9    39     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    63.08           67.7    65    86.7    75     ARMSSC2 
     RELIABLE SIDE CHAINS  .    48.81           73.9    46    85.2    54     ARMSSC2 
     SECONDARY STRUCTURE . .    62.21           72.2    36    94.7    38     ARMSSC2 
     SURFACE . . . . . . . .    74.66           53.8    39    83.0    47     ARMSSC2 
     BURIED  . . . . . . . .    39.84           88.5    26    92.9    28     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    43.17           50.0    22    75.9    29     ARMSSC3 
     RELIABLE SIDE CHAINS  .    42.33           52.4    21    80.8    26     ARMSSC3 
     SECONDARY STRUCTURE . .    41.15           53.3    15    88.2    17     ARMSSC3 
     SURFACE . . . . . . . .    43.50           47.1    17    73.9    23     ARMSSC3 
     BURIED  . . . . . . . .    42.03           60.0     5    83.3     6     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    71.77           60.0    10    76.9    13     ARMSSC4 
     RELIABLE SIDE CHAINS  .    71.77           60.0    10    76.9    13     ARMSSC4 
     SECONDARY STRUCTURE . .    81.07           57.1     7   100.0     7     ARMSSC4 
     SURFACE . . . . . . . .    72.39           62.5     8    72.7    11     ARMSSC4 
     BURIED  . . . . . . . .    69.22           50.0     2   100.0     2     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1   17 - 42   26   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    26     17 - 42       2.80     2.80 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   45 - 115  71   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    71     45 - 115      1.26     1.26 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1   17 - 42   26   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    23     17 - 39       1.53     2.95 
  LCS LOCAL_SCORE:             80.92 
 
 FRAGMENT  2   45 - 115  71   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    71     45 - 115      1.26     1.26 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1   17 - 42   26   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    15     22 - 36       0.99     3.09 
  LCS LOCAL_SCORE:             47.93 
 
 FRAGMENT  2   45 - 115  71   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    55     59 - 113      1.00     1.34 
  LCS LOCAL_SCORE:             74.51 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS      17       P    13   23   26       C        2   3  25  50  75  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      18       H    14   23   26       C        4  11  42  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      19       V    14   23   26       C        4  31  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      20       S    14   23   26       C        4  25  48  69  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      21       D    14   23   26       C        4  25  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      22       E    15   23   26       C        4  12  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      23       E    15   23   26       C        4  10  35  64  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      24       L    15   23   26       H        4  37  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      25       P    15   23   26       H        6  31  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      26       V    15   23   26       H       15  37  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      27       L    15   23   26       H       18  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      28       L    15   23   26       H       15  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      29       R    15   23   26       C       15  37  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      30       Q    15   23   26       C        9  23  47  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      31       I    15   23   26       C        8  37  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      32       P    15   23   26       C        4  18  29  57  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      33       D    15   23   26       C        4  37  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      34       W    15   23   26       C       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      35       N    15   23   26       E       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      36       I    15   23   26       E       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      37       E     7   23   26       E       12  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      38       V     7   23   26       E        3   5  16  48  64  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      39       R     7   23   26       E        3   5   7  11  55  66  79  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      40       D     3    8   26       C        2   2   3   3  10  37  43  57  74  79  82  82  83  83  83  83  83  83  83  83  
 LCS      41       G     3    5   26       C        2   2   3   3   4   5   6  30  38  66  68  81  83  83  83  83  83  83  83  83  
 LCS      42       I     3    5   26       E        2   2   2   2   4   5  18  23  67  79  82  82  83  83  83  83  83  83  83  83  
 LCS      43       M     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      44       Q     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      45       L    46   71   71       E       12  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      46       E    46   71   71       E       18  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      47       K    46   71   71       E       18  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      48       V    46   71   71       E       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      49       Y    46   71   71       E       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      50       L    46   71   71       E       15  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      51       F    46   71   71       E       14  37  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      52       K    46   71   71       C       14  31  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      53       N    46   71   71       C       14  31  54  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      54       F    46   71   71       H       13  26  48  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      55       K    46   71   71       H       16  26  42  64  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      56       H    46   71   71       H       14  30  51  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      57       A    46   71   71       H       16  31  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      58       L    46   71   71       H       16  30  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      59       A    55   71   71       H       16  30  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      60       F    55   71   71       H       16  37  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      61       T    55   71   71       H       16  32  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      62       N    55   71   71       H       16  32  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      63       A    55   71   71       H       16  31  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      64       V    55   71   71       H       16  40  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      65       G    55   71   71       H       16  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      66       E    55   71   71       H       16  40  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      67       I    55   71   71       H       16  41  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      68       S    55   71   71       H       17  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      69       E    55   71   71       H       16  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      70       A    55   71   71       H       16  41  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      71       E    55   71   71       H       16  41  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      72       G    55   71   71       C       18  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      73       H    55   71   71       C       18  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      74       H    55   71   71       C       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      75       P    55   71   71       C       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      76       G    55   71   71       E       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      77       L    55   71   71       E       11  39  56  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      78       L    55   71   71       E       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      79       T    55   71   71       E       20  43  61  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      80       E    55   71   71       E        4  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      81       W    55   71   71       C        6  19  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      82       G    55   71   71       C        6  19  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      83       K    55   71   71       E       13  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      84       V    55   71   71       E       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      85       T    55   71   71       E       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      86       V    55   71   71       E       18  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      87       T    55   71   71       E       18  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      88       W    55   71   71       E       19  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      89       W    55   71   71       C       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      90       S    55   71   71       E       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      91       H    55   71   71       C       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      92       S    55   71   71       C       12  37  53  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      93       I    55   71   71       C       18  42  60  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      94       K    55   71   71       C       18  43  61  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      95       G    55   71   71       E       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      96       L    55   71   71       C       15  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      97       H    55   71   71       C       12  42  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      98       R    55   71   71       H       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS      99       N    55   71   71       H       19  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS     100       D    55   71   71       H       15  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS     101       F    55   71   71       H       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS     102       I    55   71   71       H       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS     103       M    55   71   71       H       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS     104       A    55   71   71       H       19  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS     105       A    55   71   71       H       19  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS     106       R    55   71   71       H       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS     107       T    55   71   71       H       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS     108       D    55   71   71       H       15  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS     109       E    55   71   71       H       18  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS     110       V    55   71   71       H       18  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS     111       A    55   71   71       H       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS     112       K    55   71   71       H       20  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS     113       T    55   71   71       C       19  43  62  73  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS     114       A    53   71   71       C        2  24  47  64  77  78  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS     115       E    34   71   71       C        2  12  26  42  51  72  80  81  81  81  82  82  83  83  83  83  83  83  83  83  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):  30.32 
 
 NUMBER_OF_CA_Tg:  116      NUMBER_OF_CA_Pr:   97      PERCENT_OF_CA:  83.62  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max      24      50      73      85      90      91      93      94      94      94      96      96      97      97      97      97      97      97      97      97  
 GDT PERCENT_OF_CA_Pr   24.74   51.55   75.26   87.63   92.78   93.81   95.88   96.91   96.91   96.91   98.97   98.97  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00 
 GDT PERCENT_OF_CA_Tg   20.69   43.10   62.93   73.28   77.59   78.45   80.17   81.03   81.03   81.03   82.76   82.76   83.62   83.62   83.62   83.62   83.62   83.62   83.62   83.62 
 GDT FRAGMENT: Beg-End  34-112  27-113  19-113  18-113  18-114  17-114  17-115  17-115  17-115  17-115  17-115  17-115  17-115  17-115  17-115  17-115  17-115  17-115  17-115  17-115 
 GDT RMS_LOCAL           0.39    0.64    1.02    1.17    1.26    1.29    1.39    1.46    1.46    1.46    1.71    1.71    1.86    1.86    1.86    1.86    1.86    1.86    1.86    1.86 
 GDT RMS_ALL_CA          2.16    2.04    1.90    1.89    1.91    1.91    1.90    1.88    1.88    1.88    1.87    1.87    1.86    1.86    1.86    1.86    1.86    1.86    1.86    1.86 
 
 
 TEST (CA)  RMS =   1.86               (Number of atoms:   97) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    1.86         97    83.6   116     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0192                            CRMSCA  
     SECONDARY STRUCTURE . .    1.54         57    96.6    59     CRMSCA  
     SURFACE . . . . . . . .    2.16         54    78.3    69     CRMSCA  
     BURIED  . . . . . . . .    1.41         43    91.5    47     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    1.89        479    83.6   573     CRMSMC  
     SECONDARY STRUCTURE . .    1.54        283    96.6   293     CRMSMC  
     SURFACE . . . . . . . .    2.20        266    78.0   341     CRMSMC  
     BURIED  . . . . . . . .    1.40        213    91.8   232     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    2.85        395    86.1   459     CRMSSC  
     RELIABLE SIDE CHAINS  .    2.94        327    85.8   381     CRMSSC  
     SECONDARY STRUCTURE . .    2.71        230    96.2   239     CRMSSC  
     SURFACE . . . . . . . .    3.38        216    80.0   270     CRMSSC  
     BURIED  . . . . . . . .    2.05        179    94.7   189     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    2.41        783    84.8   923     CRMSALL 
     SECONDARY STRUCTURE . .    2.20        458    96.4   475     CRMSALL 
     SURFACE . . . . . . . .    2.83        432    79.1   546     CRMSALL 
     BURIED  . . . . . . . .    1.77        351    93.1   377     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    1.464      1.000       0.500     97    83.6   116     ERRCA  
     SECONDARY STRUCTURE . .    1.241      1.000       0.500     57    96.6    59     ERRCA  
     SURFACE . . . . . . . .    1.745      1.000       0.500     54    78.3    69     ERRCA  
     BURIED  . . . . . . . .    1.112      1.000       0.500     43    91.5    47     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    1.485      1.000       0.500    479    83.6   573     ERRMC  
     SECONDARY STRUCTURE . .    1.259      1.000       0.500    283    96.6   293     ERRMC  
     SURFACE . . . . . . . .    1.779      1.000       0.500    266    78.0   341     ERRMC  
     BURIED  . . . . . . . .    1.119      1.000       0.500    213    91.8   232     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    2.235      1.000       0.500    395    86.1   459     ERRSC  
     RELIABLE SIDE CHAINS  .    2.272      1.000       0.500    327    85.8   381     ERRSC  
     SECONDARY STRUCTURE . .    2.119      1.000       0.500    230    96.2   239     ERRSC  
     SURFACE . . . . . . . .    2.796      1.000       0.500    216    80.0   270     ERRSC  
     BURIED  . . . . . . . .    1.557      1.000       0.500    179    94.7   189     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    1.849      1.000       0.500    783    84.8   923     ERRALL 
     SECONDARY STRUCTURE . .    1.680      1.000       0.500    458    96.4   475     ERRALL 
     SURFACE . . . . . . . .    2.261      1.000       0.500    432    79.1   546     ERRALL 
     BURIED  . . . . . . . .    1.342      1.000       0.500    351    93.1   377     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        36        82        90        94        97      97     116   DISTCA 
CA  (P)     31.03     70.69     77.59     81.03     83.62             116   DISTCA 
CA  (RMS)    0.77      1.16      1.32      1.48      1.86                   DISTCA 
 
ALL (N)       239       554       670       733       783     783     923   DISTALL 
ALL (P)     25.89     60.02     72.59     79.41     84.83             923   DISTALL 
ALL (RMS)    0.75      1.16      1.45      1.80      2.41                   DISTALL 
 
 
 
 
END of the results output 
