 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
# WARNING! The number of residues in SS section: 153 , MODEL 153 , TARGET 158 
#          The number of residues possible to evaluate: 153 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP     3     A     E     C             1.00 
 SSP     4     S     C     C             1.00 
 SSP     5     S     C     C             1.00 
 SSP     6     T     C     C             1.00 
 SSP     7     R     C     C             1.00 
 SSP     8     G     C     C             1.00 
 SSP     9     N     C     C             1.00 
 SSP    10     L     C     C             1.00 
 SSP    11     D     C     C             1.00 
 SSP    12     V     H     C             1.00 
 SSP    13     A     H     H             1.00 
 SSP    14     K     H     H             1.00 
 SSP    15     L     H     H             1.00 
 SSP    16     N     C     C             1.00 
 SSP    17     G     E     E             1.00 
 SSP    18     D     E     E             1.00 
 SSP    19     W     C     C             1.00 
 SSP    20     F     E     E             1.00 
 SSP    21     S     E     E             1.00 
 SSP    22     I     E     E             1.00 
 SSP    23     V     E     E             1.00 
 SSP    24     V     E     E             1.00 
 SSP    25     A     E     E             1.00 
 SSP    26     S     C     E             1.00 
 SSP    27     N     C     C             1.00 
 SSP    28     K     C     C             1.00 
 SSP    29     R     H     H             1.00 
 SSP    30     E     H     H             1.00 
 SSP    31     K     H     H             1.00 
 SSP    32     I     C     C             1.00 
 SSP    33     E     C     C             1.00 
 SSP    34     E     C     C             1.00 
 SSP    35     N     C     C             1.00 
 SSP    36     G     C     C             1.00 
 SSP    37     S     C     C             1.00 
 SSP    38     M     C     C             1.00 
 SSP    39     R     C     C             1.00 
 SSP    40     V     C     C             1.00 
 SSP    41     F     E     E             1.00 
 SSP    42     M     E     E             1.00 
 SSP    43     Q     E     E             1.00 
 SSP    44     H     E     E             1.00 
 SSP    45     I     E     E             1.00 
 SSP    46     D     E     E             1.00 
 SSP    47     V     E     E             1.00 
 SSP    48     L     E     C             1.00 
 SSP    49     E     C     C             1.00 
 SSP    50     N     C     C             1.00 
 SSP    51     S     E     E             1.00 
 SSP    52     L     E     E             1.00 
 SSP    53     G     E     E             1.00 
 SSP    54     F     E     E             1.00 
 SSP    55     K     E     E             1.00 
 SSP    56     F     E     E             1.00 
 SSP    57     R     E     E             1.00 
 SSP    58     I     E     E             1.00 
 SSP    59     K     E     E             1.00 
 SSP    60     E     C     E             1.00 
 SSP    61     N     C     C             1.00 
 SSP    62     G     C     C             1.00 
 SSP    63     E     C     E             1.00 
 SSP    64     C     E     E             1.00 
 SSP    65     R     E     E             1.00 
 SSP    66     E     E     E             1.00 
 SSP    67     L     E     E             1.00 
 SSP    68     Y     E     E             1.00 
 SSP    69     L     E     E             1.00 
 SSP    70     V     E     E             1.00 
 SSP    71     A     E     E             1.00 
 SSP    72     Y     E     E             1.00 
 SSP    73     K     E     E             1.00 
 SSP    74     T     C     C             1.00 
 SSP    75     P     C     C             1.00 
 SSP    76     E     C     C             1.00 
 SSP    77     D     C     C             1.00 
 SSP    78     G     C     C             1.00 
 SSP    79     E     C     C             1.00 
 SSP    80     Y     E     E             1.00 
 SSP    81     F     E     E             1.00 
 SSP    82     V     E     E             1.00 
 SSP    83     E     E     E             1.00 
 SSP    84     Y     C     C             1.00 
 SSP    85     D     C     C             1.00 
 SSP    86     G     C     C             1.00 
 SSP    87     G     E     E             1.00 
 SSP    88     N     E     E             1.00 
 SSP    89     T     E     E             1.00 
 SSP    90     F     E     E             1.00 
 SSP    91     T     E     E             1.00 
 SSP    92     I     E     E             1.00 
 SSP    93     L     E     E             1.00 
 SSP    94     K     E     E             1.00 
 SSP    95     T     E     E             1.00 
 SSP    96     D     C     C             1.00 
 SSP    97     Y     C     C             1.00 
 SSP    98     D     C     C             1.00 
 SSP    99     R     C     C             1.00 
 SSP   100     Y     E     E             1.00 
 SSP   101     V     E     E             1.00 
 SSP   102     M     E     E             1.00 
 SSP   103     F     E     E             1.00 
 SSP   104     H     E     E             1.00 
 SSP   105     L     E     E             1.00 
 SSP   106     I     E     E             1.00 
 SSP   107     N     E     E             1.00 
 SSP   108     F     E     E             1.00 
 SSP   109     K     E     E             1.00 
 SSP   110     N     C     C             1.00 
 SSP   111     G     C     C             1.00 
 SSP   112     E     E     E             1.00 
 SSP   113     T     E     E             1.00 
 SSP   114     F     E     E             1.00 
 SSP   115     Q     E     E             1.00 
 SSP   116     L     E     E             1.00 
 SSP   117     M     E     E             1.00 
 SSP   118     V     E     E             1.00 
 SSP   119     L     E     E             1.00 
 SSP   120     Y     E     E             1.00 
 SSP   121     G     E     E             1.00 
 SSP   122     R     C     C             1.00 
 SSP   123     T     C     C             1.00 
 SSP   124     K     C     C             1.00 
 SSP   125     D     C     C             1.00 
 SSP   126     L     C     C             1.00 
 SSP   127     S     C     C             1.00 
 SSP   128     S     H     H             1.00 
 SSP   129     D     H     H             1.00 
 SSP   130     I     H     H             1.00 
 SSP   131     K     H     H             1.00 
 SSP   132     E     H     H             1.00 
 SSP   133     K     H     H             1.00 
 SSP   134     F     H     H             1.00 
 SSP   135     A     H     H             1.00 
 SSP   136     K     H     H             1.00 
 SSP   137     L     H     H             1.00 
 SSP   138     C     H     H             1.00 
 SSP   139     E     H     H             1.00 
 SSP   140     A     C     C             1.00 
 SSP   141     H     C     C             1.00 
 SSP   142     G     C     C             1.00 
 SSP   143     I     C     C             1.00 
 SSP   144     T     C     C             1.00 
 SSP   145     R     H     H             1.00 
 SSP   146     D     H     H             1.00 
 SSP   147     N     H     H             1.00 
 SSP   148     I     E     C             1.00 
 SSP   149     I     E     E             1.00 
 SSP   150     D     E     E             1.00 
 SSP   151     L     H     C             1.00 
 SSP   152     T     H     C             1.00 
 SSP   153     K     H     C             1.00 
 SSP   154     T     C     C             1.00 
 SSP   155     D     C     C             1.00 
 SSP  BREAK 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              93.5      84.0     95.8     94.6     96.8 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        96.2      88.0     98.6     96.8     96.8 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG           15              93.3               0.0 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00     153    100.0     93.5 
 
 BIN  0.00 - 1.00      1.00     153    100.0     93.5 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
 
 CONSIDERED - explicitly provided contacts (with positive confidence) or 
              non contacts (with negative confidence) possible to evaluate 
 SEP      - Minimum separation between residues considered 
 NPC      - Number of contacts predicted correctly 
 PC(P)    - Percent of contacts predicted correctly from CONSIDERED in PREDICTION 
 PC(T)    - Percent of contacts predicted correctly from CONSIDERED in TARGET with SEP limit 
 PC(TT)   - Percent of contacts predicted correctly from TOTAL in TARGET with SEP limit 
 
                        CONSIDERED     CONSIDERED       TOTAL          TOTAL 
                      in PREDICTION    in TARGET    in PREDICTION    in TARGET 
 ALL RESIDUES USED         154             154           154            158 
 ALL CONTACTS (< 8.0A)     724             747           724            768 
 
               in PREDICTION      Predicted correctly          Submitted as        in TARGET 
                CONSIDERED     NPC   PC(P)   PC(T)   PC(TT)    NOT  predicted   CONSIDERED  TOTAL  |   SEP 
 RES CONTACTS       724        675   93.23   90.36   87.89       0     0.00         747       768  |   1-9999 
 RES CONTACTS       356        341   95.79   95.25   92.92       0     0.00         358       367  |   1-4    
 RES CONTACTS        67         64   95.52   88.89   88.89       0     0.00          72        72  |   5-8    
 RES CONTACTS       301        270   89.70   85.17   82.07       0     0.00         317       329  |   9-9999 
 
 
 
# WARNING! TARGET 1287 atoms, MODEL 1339 atoms, 1286 common with TARGET 
           Number of atoms possible to evaluate: 1254 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    32.87           85.6   306    97.5   314     ARMSMC  
     SECONDARY STRUCTURE . .    16.91           92.0   162   100.0   162     ARMSMC  
     SURFACE . . . . . . . .    42.56           80.0   160    97.6   164     ARMSMC  
     BURIED  . . . . . . . .    16.74           91.8   146    97.3   150     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    70.06           51.1   137    97.2   141     ARMSSC1 
     RELIABLE SIDE CHAINS  .    69.43           50.8   128    97.0   132     ARMSSC1 
     SECONDARY STRUCTURE . .    71.76           58.7    75   100.0    75     ARMSSC1 
     SURFACE . . . . . . . .    84.35           33.8    74    96.1    77     ARMSSC1 
     BURIED  . . . . . . . .    48.13           71.4    63    98.4    64     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    70.12           50.9   108    97.3   111     ARMSSC2 
     RELIABLE SIDE CHAINS  .    67.50           52.4    82    97.6    84     ARMSSC2 
     SECONDARY STRUCTURE . .    64.21           61.0    59   100.0    59     ARMSSC2 
     SURFACE . . . . . . . .    74.94           42.6    61    95.3    64     ARMSSC2 
     BURIED  . . . . . . . .    63.32           61.7    47   100.0    47     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    72.42           36.6    41    95.3    43     ARMSSC3 
     RELIABLE SIDE CHAINS  .    72.22           38.5    39    95.1    41     ARMSSC3 
     SECONDARY STRUCTURE . .    74.49           25.0    20   100.0    20     ARMSSC3 
     SURFACE . . . . . . . .    69.51           32.3    31    93.9    33     ARMSSC3 
     BURIED  . . . . . . . .    80.80           50.0    10   100.0    10     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    85.14           27.3    22   100.0    22     ARMSSC4 
     RELIABLE SIDE CHAINS  .    85.14           27.3    22   100.0    22     ARMSSC4 
     SECONDARY STRUCTURE . .    93.45           20.0    10   100.0    10     ARMSSC4 
     SURFACE . . . . . . . .    94.12           23.5    17   100.0    17     ARMSSC4 
     BURIED  . . . . . . . .    42.16           40.0     5   100.0     5     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1    3 - 156  154  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT   154      3 - 156      1.34     1.34 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1    3 - 156  154  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT   154      3 - 156      1.34     1.34 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1    3 - 156  154  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    92     63 - 154      0.95     1.36 
  LCS LOCAL_SCORE:             49.63 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS       3       A     6  154  154       E       24  68  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS       4       S    55  154  154       C       15  68  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS       5       S    55  154  154       C       34  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS       6       T    55  154  154       C        7  18  63  87  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS       7       R    55  154  154       C        5  17  63  87  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS       8       G    55  154  154       C        5  15  53  87  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS       9       N    55  154  154       C        7  50  84  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      10       L    55  154  154       C       19  69  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      11       D    55  154  154       C       30  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      12       V    55  154  154       H        7  64  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      13       A    55  154  154       H       31  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      14       K    55  154  154       H       37  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      15       L    55  154  154       H       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      16       N    55  154  154       C       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      17       G    55  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      18       D    55  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      19       W    55  154  154       C       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      20       F    55  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      21       S    55  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      22       I    55  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      23       V    55  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      24       V    55  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      25       A    55  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      26       S    55  154  154       C       30  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      27       N    55  154  154       C       10  67  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      28       K    55  154  154       C       30  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      29       R    55  154  154       H       36  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      30       E    55  154  154       H       28  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      31       K    55  154  154       H       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      32       I    55  154  154       C       30  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      33       E    55  154  154       C        6  61  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      34       E    55  154  154       C       31  69  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      35       N    55  154  154       C       26  67  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      36       G    55  154  154       C       28  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      37       S    55  154  154       C       27  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      38       M    55  154  154       C       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      39       R    55  154  154       C       20  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      40       V    55  154  154       C       18  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      41       F    55  154  154       E       37  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      42       M    55  154  154       E       27  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      43       Q    55  154  154       E       27  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      44       H    55  154  154       E       20  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      45       I    55  154  154       E       29  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      46       D    55  154  154       E       29  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      47       V    55  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      48       L    55  154  154       E       34  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      49       E    55  154  154       C       30  68  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      50       N    55  154  154       C       31  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      51       S    55  154  154       E        8  65  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      52       L    55  154  154       E        9  69  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      53       G    55  154  154       E        6  66  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      54       F    55  154  154       E       10  69  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      55       K    55  154  154       E       34  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      56       F    55  154  154       E       23  69  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      57       R    55  154  154       E       34  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      58       I    55  154  154       E       33  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      59       K    53  154  154       E        6  49  84  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      60       E    18  154  154       C        4   8  15  75  91  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      61       N    20  154  154       C        4   6  12  23  55  74  94  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      62       G    91  154  154       C        4  10  17  59  84  92  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      63       E    92  154  154       C        4  23  69  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      64       C    92  154  154       E       14  61  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      65       R    92  154  154       E       21  62  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      66       E    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      67       L    92  154  154       E       28  68  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      68       Y    92  154  154       E       15  67  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      69       L    92  154  154       E       31  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      70       V    92  154  154       E       31  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      71       A    92  154  154       E       37  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      72       Y    92  154  154       E       28  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      73       K    92  154  154       E        8  67  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      74       T    92  154  154       C       31  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      75       P    92  154  154       C       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      76       E    92  154  154       C       25  62  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      77       D    92  154  154       C        5  22  53  77  91  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      78       G    92  154  154       C       25  62  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      79       E    92  154  154       C       20  68  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      80       Y    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      81       F    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      82       V    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      83       E    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      84       Y    92  154  154       C       37  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      85       D    92  154  154       C       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      86       G    92  154  154       C       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      87       G    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      88       N    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      89       T    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      90       F    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      91       T    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      92       I    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      93       L    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      94       K    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      95       T    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      96       D    92  154  154       C       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      97       Y    92  154  154       C       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      98       D    92  154  154       C       34  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS      99       R    92  154  154       C       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     100       Y    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     101       V    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     102       M    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     103       F    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     104       H    92  154  154       E       37  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     105       L    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     106       I    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     107       N    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     108       F    92  154  154       E       37  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     109       K    92  154  154       E       37  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     110       N    92  154  154       C       34  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     111       G    92  154  154       C       15  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     112       E    92  154  154       E       12  65  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     113       T    92  154  154       E       31  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     114       F    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     115       Q    92  154  154       E       37  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     116       L    92  154  154       E       33  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     117       M    92  154  154       E       37  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     118       V    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     119       L    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     120       Y    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     121       G    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     122       R    92  154  154       C       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     123       T    92  154  154       C       16  68  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     124       K    92  154  154       C       23  68  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     125       D    92  154  154       C       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     126       L    92  154  154       C       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     127       S    92  154  154       C       25  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     128       S    92  154  154       H       37  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     129       D    92  154  154       H       37  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     130       I    92  154  154       H       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     131       K    92  154  154       H       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     132       E    92  154  154       H       34  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     133       K    92  154  154       H       37  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     134       F    92  154  154       H       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     135       A    92  154  154       H       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     136       K    92  154  154       H       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     137       L    92  154  154       H       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     138       C    92  154  154       H       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     139       E    92  154  154       H       18  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     140       A    92  154  154       C       17  68  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     141       H    92  154  154       C       24  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     142       G    92  154  154       C       30  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     143       I    92  154  154       C       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     144       T    92  154  154       C       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     145       R    92  154  154       H       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     146       D    92  154  154       H       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     147       N    92  154  154       H       37  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     148       I    92  154  154       E       37  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     149       I    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     150       D    92  154  154       E       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     151       L    92  154  154       H       38  70  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     152       T    92  154  154       H       12  60  86  89  92  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     153       K    92  154  154       H        5  17  55  86  91  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     154       T    92  154  154       C        2  24  68  87  91  94  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     155       D    91  154  154       C        1   3  10  46  75  89  96  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS     156       R     3  154  154       C        1   1   1   8  20  48  87  97  97  97  97  97  97  97  97  97  97  97  97  97  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):  47.15 
 
 NUMBER_OF_CA_Tg:  158      NUMBER_OF_CA_Pr:  154      PERCENT_OF_CA:  97.47  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max      61     112     137     142     146     149     152     154     154     154     154     154     154     154     154     154     154     154     154     154  
 GDT PERCENT_OF_CA_Pr   39.61   72.73   88.96   92.21   94.81   96.75   98.70  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00 
 GDT PERCENT_OF_CA_Tg   38.61   70.89   86.71   89.87   92.41   94.30   96.20   97.47   97.47   97.47   97.47   97.47   97.47   97.47   97.47   97.47   97.47   97.47   97.47   97.47 
 GDT FRAGMENT: Beg-End  15-151   5-151   3-152   3-152   3-152   3-154   3-155   3-156   3-156   3-156   3-156   3-156   3-156   3-156   3-156   3-156   3-156   3-156   3-156   3-156 
 GDT RMS_LOCAL           0.35    0.58    0.76    0.83    0.95    1.05    1.20    1.34    1.34    1.34    1.34    1.34    1.34    1.34    1.34    1.34    1.34    1.34    1.34    1.34 
 GDT RMS_ALL_CA          1.37    1.41    1.39    1.38    1.37    1.36    1.34    1.34    1.34    1.34    1.34    1.34    1.34    1.34    1.34    1.34    1.34    1.34    1.34    1.34 
 
 
 TEST (CA)  RMS =   1.34               (Number of atoms:  154) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    1.34        154    97.5   158     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0087                            CRMSCA  
     SECONDARY STRUCTURE . .    0.77         81   100.0    81     CRMSCA  
     SURFACE . . . . . . . .    1.62         80    96.4    83     CRMSCA  
     BURIED  . . . . . . . .    0.95         74    98.7    75     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    1.39        758    97.3   779     CRMSMC  
     SECONDARY STRUCTURE . .    0.85        402   100.0   402     CRMSMC  
     SURFACE . . . . . . . .    1.69        396    96.4   411     CRMSMC  
     BURIED  . . . . . . . .    0.98        362    98.4   368     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    2.52        639    97.6   655     CRMSSC  
     RELIABLE SIDE CHAINS  .    2.49        559    97.6   573     CRMSSC  
     SECONDARY STRUCTURE . .    2.28        357   100.0   357     CRMSSC  
     SURFACE . . . . . . . .    3.07        346    96.1   360     CRMSSC  
     BURIED  . . . . . . . .    1.65        293    99.3   295     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    2.03       1254    97.4  1287     CRMSALL 
     SECONDARY STRUCTURE . .    1.75        681   100.0   681     CRMSALL 
     SURFACE . . . . . . . .    2.48        666    96.2   692     CRMSALL 
     BURIED  . . . . . . . .    1.34        588    98.8   595     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.580      0.286       0.272    154    97.5   158     ERRCA  
     SECONDARY STRUCTURE . .    0.440      0.303       0.328     81   100.0    81     ERRCA  
     SURFACE . . . . . . . .    0.661      0.261       0.217     80    96.4    83     ERRCA  
     BURIED  . . . . . . . .    0.492      0.312       0.331     74    98.7    75     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.585      0.274       0.254    758    97.3   779     ERRMC  
     SECONDARY STRUCTURE . .    0.442      0.288       0.305    402   100.0   402     ERRMC  
     SURFACE . . . . . . . .    0.695      0.264       0.217    396    96.4   411     ERRMC  
     BURIED  . . . . . . . .    0.464      0.284       0.296    362    98.4   368     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    1.203      0.336       0.230    639    97.6   655     ERRSC  
     RELIABLE SIDE CHAINS  .    1.181      0.332       0.230    559    97.6   573     ERRSC  
     SECONDARY STRUCTURE . .    1.072      0.334       0.246    357   100.0   357     ERRSC  
     SURFACE . . . . . . . .    1.607      0.371       0.219    346    96.1   360     ERRSC  
     BURIED  . . . . . . . .    0.727      0.295       0.244    293    99.3   295     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.894      0.306       0.245   1254    97.4  1287     ERRALL 
     SECONDARY STRUCTURE . .    0.772      0.315       0.280    681   100.0   681     ERRALL 
     SURFACE . . . . . . . .    1.161      0.320       0.220    666    96.2   692     ERRALL 
     BURIED  . . . . . . . .    0.592      0.291       0.274    588    98.8   595     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        99       141       147       153       154     154     158   DISTCA 
CA  (P)     62.66     89.24     93.04     96.84     97.47             158   DISTCA 
CA  (RMS)    0.59      0.87      1.00      1.27      1.34                   DISTCA 
 
ALL (N)       636       977      1093      1208      1254    1254    1287   DISTALL 
ALL (P)     49.42     75.91     84.93     93.86     97.44            1287   DISTALL 
ALL (RMS)    0.62      0.97      1.21      1.64      2.03                   DISTALL 
 
 
 
 
END of the results output 
