 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
# WARNING! The number of residues in SS section: 115 , MODEL 115 , TARGET 335 
#          The number of residues possible to evaluate: 115 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP    36     I     E     C             1.00 
 SSP    37     T     E     C             1.00 
 SSP    38     S     C     E             1.00 
 SSP    39     I     C     E             1.00 
 SSP    40     R     C     C             1.00 
 SSP    41     A     C     C             1.00 
 SSP    42     G     C     C             1.00 
 SSP    43     R     C     C             1.00 
 SSP    44     A     C     C             1.00 
 SSP    45     K     C     C             1.00 
 SSP    46     P     C     C             1.00 
 SSP    47     G     C     C             1.00 
 SSP    48     L     C     C             1.00 
 SSP    49     L     C     C             1.00 
 SSP    50     R     H     C             1.00 
 SSP    51     Q     H     C             1.00 
 SSP    52     H     H     C             1.00 
 SSP    53     L     H     C             1.00 
 SSP    54     T     H     C             1.00 
 SSP    55     A     H     C             1.00 
 SSP    56     V     H     C             1.00 
 SSP    57     K     H     E             1.00 
 SSP    58     A     H     E             1.00 
 SSP    59     A     H     E             1.00 
 SSP    60     T     H     C             1.00 
 SSP    61     E     H     C             1.00 
 SSP    62     I     H     C             1.00 
 SSP    63     C     H     C             1.00 
 SSP    64     G     C     C             1.00 
 SSP    65     A     C     C             1.00 
 SSP    66     T     E     C             1.00 
 SSP  BREAK 
 SSP    73     G     C     C             1.00 
 SSP    74     S     C     C             1.00 
 SSP    75     Q     C     C             1.00 
 SSP    76     R     C     E             1.00 
 SSP    77     L     E     E             1.00 
 SSP    78     L     E     E             1.00 
 SSP    79     F     E     E             1.00 
 SSP    80     R     E     C             1.00 
 SSP    81     P     C     C             1.00 
 SSP    82     G     C     C             1.00 
 SSP    83     T     C     C             1.00 
 SSP    84     V     C     C             1.00 
 SSP    85     R     C     C             1.00 
 SSP    86     G     C     C             1.00 
 SSP    87     G     C     C             1.00 
 SSP    88     D     E     C             1.00 
 SSP    89     Y     E     E             1.00 
 SSP    90     R     E     E             1.00 
 SSP    91     F     E     E             1.00 
 SSP    92     A     E     E             1.00 
 SSP    93     I     E     C             1.00 
 SSP    94     G     E     C             1.00 
 SSP    95     S     E     C             1.00 
 SSP    96     A     E     C             1.00 
 SSP    97     G     E     C             1.00 
 SSP    98     S     E     C             1.00 
 SSP    99     C     H     C             1.00 
 SSP   100     T     H     H             1.00 
 SSP   101     L     H     H             1.00 
 SSP   102     V     H     H             1.00 
 SSP   103     L     H     H             1.00 
 SSP   104     Q     H     C             1.00 
 SSP   105     T     H     C             1.00 
 SSP   106     V     H     C             1.00 
 SSP   107     L     H     H             1.00 
 SSP   108     P     H     H             1.00 
 SSP   109     A     H     H             1.00 
 SSP  BREAK 
 SSP   112     F     C     H             1.00 
 SSP   113     A     C     H             1.00 
 SSP   114     D     C     H             1.00 
 SSP   115     G     C     C             1.00 
 SSP   116     P     C     C             1.00 
 SSP   117     S     E     C             1.00 
 SSP   118     R     E     E             1.00 
 SSP   119     V     E     E             1.00 
 SSP   120     E     E     E             1.00 
 SSP   121     V     E     E             1.00 
 SSP   122     S     E     C             1.00 
 SSP   123     G     E     C             1.00 
 SSP   124     G     E     C             1.00 
 SSP   125     T     C     C             1.00 
 SSP   126     D     E     C             1.00 
 SSP   127     N     C     E             1.00 
 SSP   128     P     C     E             1.00 
 SSP   129     S     C     C             1.00 
 SSP   130     A     C     C             1.00 
 SSP   131     P     C     C             1.00 
 SSP   132     P     C     C             1.00 
 SSP   133     A     C     C             1.00 
 SSP   134     D     H     C             1.00 
 SSP   135     F     H     H             1.00 
 SSP   136     I     H     H             1.00 
 SSP   137     R     H     H             1.00 
 SSP   138     R     H     H             1.00 
 SSP   139     V     C     H             1.00 
 SSP   140     L     H     H             1.00 
 SSP   141     E     H     H             1.00 
 SSP   142     P     H     H             1.00 
 SSP   143     L     H     H             1.00 
 SSP   144     L     H     H             1.00 
 SSP   145     A     H     H             1.00 
 SSP   146     K     H     H             1.00 
 SSP   147     I     H     C             1.00 
 SSP   148     G     C     C             1.00 
 SSP   149     I     C     C             1.00 
 SSP   150     H     C     C             1.00 
 SSP   151     Q     E     C             1.00 
 SSP   152     Q     E     E             1.00 
 SSP   153     T     E     E             1.00 
 SSP   154     T     E     E             1.00 
 SSP   155     L     E     E             1.00 
 SSP   156     L     E     C             1.00 
 SSP   157     R     E     C             1.00 
 SSP   158     H     C     C             1.00 
 SSP  BREAK 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              58.3      47.4     44.1     79.1     34.3 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        59.9      38.9     64.7     80.0     34.3 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG           10              70.0              10.0 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            1                 1 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00     115    100.0     58.3 
 
 BIN  0.00 - 1.00      1.00     115    100.0     58.3 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
# WARNING! The number of residues with CB atom coordinates: MODEL 0 , TARGET 299 
 
# WARNING! TARGET 2492 atoms, MODEL 2211 atoms, 2100 common with TARGET 
           Number of atoms possible to evaluate: 460 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    76.80           48.2   224    33.5   668     ARMSMC  
     SECONDARY STRUCTURE . .    69.37           53.5   129    31.9   404     ARMSMC  
     SURFACE . . . . . . . .    77.64           47.6   105    32.8   320     ARMSMC  
     BURIED  . . . . . . . .    76.05           48.7   119    34.2   348     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   262     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   229     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   171     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   123     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   139     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   183     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   130     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   114     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    94     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    89     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    70     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    56     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    47     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    52     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    18     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    28     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    28     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    17     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    24     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     4     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1   36 - 66   31   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    17     40 - 56       4.83    16.02 
  LCS LOCAL_SCORE:             47.97 
 
 FRAGMENT  2   73 - 109  37   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    26     84 - 109      4.69    16.45 
  LCS LOCAL_SCORE:             65.01 
 
 FRAGMENT  3  112 - 158  47   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    25    127 - 151      4.91     9.90 
  LONGEST_CONTINUOUS_SEGMENT    25    128 - 152      4.94     9.74 
  LONGEST_CONTINUOUS_SEGMENT    25    134 - 158      4.76     8.36 
  LCS LOCAL_SCORE:             47.76 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1   36 - 66   31   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     8     45 - 52       1.86    23.93 
  LCS LOCAL_SCORE:             17.69 
 
 FRAGMENT  2   73 - 109  37   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    14     96 - 109      1.90    18.20 
  LCS LOCAL_SCORE:             33.67 
 
 FRAGMENT  3  112 - 158  47   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    16    134 - 149      1.99    13.99 
  LCS LOCAL_SCORE:             22.50 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1   36 - 66   31   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6     46 - 51       0.94    26.29 
  LCS LOCAL_SCORE:             12.80 
 
 FRAGMENT  2   73 - 109  37   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     9     87 - 95       0.87    15.06 
  LCS LOCAL_SCORE:             17.17 
 
 FRAGMENT  3  112 - 158  47   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    11    138 - 148      0.81    16.69 
  LCS LOCAL_SCORE:             14.08 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS      36       I     3    5   11       E        0   0   0   0   1   1   2   2   2   2   2   2   3   3   3   3   4   5   7   8  
 LCS      37       T     4    5   11       E        0   1   1   1   1   1   2   2   2   2   2   2   3   3   3   3   4   5   7   8  
 LCS      38       S     4    5   11       C        0   1   1   1   1   1   2   2   2   2   2   2   4   4   4   5   5   5   6   8  
 LCS      39       I     4    5   11       C        0   1   1   1   1   1   2   2   2   2   2   2   3   4   5   6   8   8   9  19  
 LCS      40       R     4    5   17       C        0   1   1   1   2   3   3   3   4   4   5   7   9  11  15  16  17  20  22  22  
 LCS      41       A     3    5   17       C        0   0   1   1   1   1   2   2   4   4   4   5   5   6   7  12  16  19  22  22  
 LCS      42       G     3    5   17       C        0   0   1   1   2   2   2   3   4   4   4  10  13  14  16  17  19  20  22  22  
 LCS      43       R     4    5   17       C        0   1   1   1   2   2   2   2   3   3   3  11  13  14  16  17  19  20  22  22  
 LCS      44       A     4    5   17       C        0   1   1   1   1   1   2   2   2   3   3  10  13  14  16  17  19  20  22  22  
 LCS      45       K     4    8   17       C        0   1   1   1   2   2   2   4   6   8  10  11  13  14  16  17  19  20  22  22  
 LCS      46       P     6    8   17       C        0   1   1   1   2   2   2   2   3   7   9  11  13  14  16  17  19  20  22  22  
 LCS      47       G     6    8   17       C        0   1   1   1   2   4   5   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS      48       L     6    8   17       C        0   1   2   2   3   4   5   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS      49       L     6    8   17       C        0   1   1   2   3   4   5   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS      50       R     6    8   17       H        0   1   2   2   3   4   5   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS      51       Q     6    8   17       H        0   1   1   1   2   2   2   4   8   9  10  11  13  14  16  17  19  20  21  22  
 LCS      52       H     4    8   17       H        0   1   1   1   2   3   5   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS      53       L     3    5   17       H        0   0   1   2   3   4   5   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS      54       T     3    4   17       H        0   0   0   0   1   2   3   5   7   9  10  11  13  14  16  17  19  20  22  22  
 LCS      55       A     3    4   17       H        0   0   1   1   1   1   1   5   7   9  10  11  13  14  16  17  19  20  22  22  
 LCS      56       V     3    3   17       H        0   0   1   1   1   1   2   3   4   5   9  11  13  14  16  17  19  20  22  22  
 LCS      57       K     3    3   14       H        0   0   1   1   1   1   1   4   4   4   5   5   5   8   8   9  14  16  18  21  
 LCS      58       A     3    3   14       H        0   0   1   1   1   1   3   4   4   4   5   5   5   5   7   7  10  11  12  13  
 LCS      59       A     4    5   14       H        0   1   1   1   1   2   2   2   3   3   5   5   5   5   7   7   8   8   9  10  
 LCS      60       T     4    5   14       H        0   1   1   1   1   2   2   2   3   3   3   3   4   5   6   7   8   8   9   9  
 LCS      61       E     4    5   12       H        0   1   1   1   1   2   2   2   3   3   3   3   4   5   5   5   8   8   8   8  
 LCS      62       I     4    5   12       H        0   1   1   1   1   2   2   2   3   3   3   3   5   5   6   7   8   8   8   8  
 LCS      63       C     3    5   12       H        0   0   0   1   1   2   2   2   3   3   3   3   4   5   5   5   5   6   7   8  
 LCS      64       G     3    5   12       C        0   0   0   1   1   2   2   2   2   2   3   3   4   4   4   5   5   5   7   8  
 LCS      65       A     3    5   12       C        0   0   0   1   1   2   2   2   3   3   3   3   4   5   5   5   5   6   7   8  
 LCS      66       T     3    4   12       E        0   0   1   1   1   1   2   2   3   3   3   3   4   5   5   5   5   6   7   8  
 LCS      67       V     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      68       E     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      69       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      70       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      71       E     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      72       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      73       G     4   11   18       C        0   1   1   2   2   3   3   3   4   4   4   4   4   4   5   5   8   8   9  10  
 LCS      74       S     4   11   18       C        0   1   2   2   2   3   3   3   4   4   4   4   4   5   5   5   6   6   9  10  
 LCS      75       Q     5   11   18       C        0   1   1   2   2   3   3   3   4   4   4   4   5   5   5   6   6   6   7   8  
 LCS      76       R     5   11   18       C        0   1   1   2   2   3   3   3   4   4   4   4   5   5   6   6   6   6   7   8  
 LCS      77       L     6   11   18       E        0   1   1   2   2   3   3   3   4   4   4   4   5   5   6   8   9  10  10  11  
 LCS      78       L     6   11   18       E        1   1   1   2   2   3   3   3   4   4   4   4   5   5   6   8   9  10  10  11  
 LCS      79       F     6   11   19       E        1   1   1   2   2   3   3   3   4   4   4   5   5   6   7   8   9  10  10  11  
 LCS      80       R     6   11   19       E        1   1   1   2   2   3   3   3   4   4   4   5   5   6   7   8   9  10  10  11  
 LCS      81       P     6   11   22       C        1   1   1   2   2   3   3   3   4   4   4   5   5   6   7   8  17  20  22  22  
 LCS      82       G     6   11   22       C        1   1   1   2   2   3   3   3   4   4   5   5   5   6  15  17  19  20  22  22  
 LCS      83       T     5   11   24       C        1   1   1   2   2   3   3   4   4   8   9  11  13  14  16  17  19  20  22  22  
 LCS      84       V     5   12   26       C        1   1   1   1   2   3   4   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS      85       R     5   12   26       C        0   1   2   2   3   3   4   5   7   9  10  11  13  14  16  17  19  20  22  22  
 LCS      86       G     3   12   26       C        0   1   1   2   3   4   5   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS      87       G     9   12   26       C        1   2   2   2   3   3   3   4   7   8  10  11  13  14  16  17  19  20  22  22  
 LCS      88       D     9   12   26       E        1   2   2   2   5   5   6   7   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS      89       Y     9   12   26       E        1   2   2   2   5   5   6   7   8   9   9  10  13  14  16  17  19  20  22  22  
 LCS      90       R     9   12   26       E        1   2   2   2   3   3   6   7   8   9   9  10  13  14  16  17  19  20  22  22  
 LCS      91       F     9   12   26       E        1   2   2   2   5   5   6   7   8   9   9  10  10  11  11  11  11  11  20  22  
 LCS      92       A     9   12   26       E        1   2   2   2   3   3   3   5   8   9   9  10  10  11  11  11  19  20  22  22  
 LCS      93       I     9   12   26       E        1   2   2   2   5   5   6   7   8   9   9  10  10  11  11  11  11  11  13  22  
 LCS      94       G     9   12   26       E        0   1   2   2   3   3   3   5   6   9   9  10  10  11  11  16  19  20  22  22  
 LCS      95       S     9   12   26       E        0   2   2   2   3   3   5   7   8   9   9  10  10  11  11  11  11  20  22  22  
 LCS      96       A     3   14   26       E        0   0   1   1   3   4   6   7   8   9   9  10  13  14  16  17  19  20  22  22  
 LCS      97       G     3   14   26       E        0   0   1   2   3   4   4   5   8   9   9  10  13  14  16  17  19  20  22  22  
 LCS      98       S     3   14   26       E        0   0   1   3   3   4   6   7   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS      99       C     6   14   26       H        1   1   1   3   3   4   6   7   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     100       T     6   14   26       H        1   1   2   3   4   5   6   7   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     101       L     6   14   26       H        1   1   2   3   5   5   6   7   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     102       V     6   14   26       H        1   1   2   3   3   4   6   7   8   9   9  10  12  13  16  17  19  20  22  22  
 LCS     103       L     7   14   26       H        1   2   2   3   3   4   6   7   8   9   9  10  12  13  16  17  18  20  22  22  
 LCS     104       Q     7   14   26       H        1   2   2   3   5   5   6   7   8   9   9  10  10  11  11  11  12  15  17  19  
 LCS     105       T     7   14   26       H        1   2   2   3   5   5   6   7   8   9   9  10  10  11  11  11  12  14  16  18  
 LCS     106       V     7   14   26       H        1   2   2   3   5   5   6   7   8   9   9  10  10  12  14  15  17  18  19  20  
 LCS     107       L     7   14   26       H        1   2   2   3   5   5   6   7   8   9   9  10  11  13  14  16  17  19  20  21  
 LCS     108       P     7   14   26       H        1   2   2   3   5   5   6   7   8   9   9  10  10  11  11  11  11  14  15  17  
 LCS     109       A     7   14   26       H        1   2   2   3   5   5   6   7   8   9   9  10  10  11  11  11  12  15  17  18  
 LCS     110       L     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     111       W     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     112       F     3    3   17       C        0   0   0   0   0   1   1   2   2   5   7   8   9  10  12  13  15  17  17  19  
 LCS     113       A     3    5   17       C        0   0   1   1   1   3   4   5   6   7   9  10  11  13  16  17  18  20  22  22  
 LCS     114       D     3    7   17       C        0   0   1   1   1   2   3   5   5   7   9  10  11  13  14  16  17  19  19  21  
 LCS     115       G     4   10   17       C        0   0   1   1   2   3   6   7   8   9   9  10  11  13  16  17  18  20  22  22  
 LCS     116       P     7   10   17       C        1   2   2   3   5   5   6   7   8   9   9  10  12  14  16  17  19  20  22  22  
 LCS     117       S     7   10   17       E        1   2   2   3   5   5   6   7   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     118       R     7   10   17       E        1   2   2   3   5   5   6   7   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     119       V     7   10   17       E        1   2   2   3   5   5   6   7   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     120       E     7   10   17       E        1   2   2   3   5   5   6   7   8   9   9  10  10  14  16  17  19  20  22  22  
 LCS     121       V     7   10   17       E        1   2   2   3   5   5   6   7   8   9   9  11  13  14  16  17  19  20  22  22  
 LCS     122       S     7   10   17       E        1   2   2   3   5   5   6   7   8   9   9  10  10  11  11  11  11  11  13  14  
 LCS     123       G     3   10   17       E        0   0   1   1   1   2   4   4   6   7   8   9  10  11  11  11  11  11  21  22  
 LCS     124       G     3   10   17       E        0   1   2   2   2   5   5   6   7   8   9  10  10  11  11  11  11  11  12  13  
 LCS     125       T     4    7   17       C        0   1   1   1   2   4   5   7   8   9   9  10  10  11  11  11  11  11  12  13  
 LCS     126       D     4    7   17       E        0   1   1   1   2   3   4   5   7   8   9  10  10  11  11  11  11  11  12  13  
 LCS     127       N     4    7   25       C        0   1   1   1   1   3   4   5   5   6   7   8  10  10  11  17  19  20  22  22  
 LCS     128       P     5    7   25       C        0   1   1   1   1   2   3   3   4   5   6   9  12  14  16  17  19  20  22  22  
 LCS     129       S     5    7   25       C        0   1   1   1   3   3   4   5   6   7   8  10  13  14  16  17  19  20  22  22  
 LCS     130       A     5    5   25       C        0   1   1   1   2   3   4   5   5   5   6   7   8   8  10  11  13  20  22  22  
 LCS     131       P     5    5   25       C        0   1   1   1   1   1   2   2   3   3   5   6   7   8   8  11  11  15  20  22  
 LCS     132       P     5    5   25       C        0   1   1   1   1   1   2   2   4   5   5   6   6   7   7   8  10  11  12  15  
 LCS     133       A     3    3   25       C        0   0   0   0   1   1   1   2   2   3   4   4   5   6   7   7   8   9  10  12  
 LCS     134       D     6   16   25       H        1   1   1   3   4   4   4   5   5   6   7   9  12  14  16  17  19  20  22  22  
 LCS     135       F     6   16   25       H        1   1   1   2   4   4   4   5   6   7   9  11  13  14  16  17  19  20  22  22  
 LCS     136       I     6   16   25       H        1   1   1   1   3   4   4   5   6   7   9  11  13  14  16  17  19  20  22  22  
 LCS     137       R     6   16   25       H        1   1   1   2   4   4   4   5   7   8  10  11  13  14  16  17  19  20  22  22  
 LCS     138       R    11   16   25       H        1   1   3   3   4   4   5   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     139       V    11   16   25       C        1   2   3   3   4   4   5   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     140       L    11   16   25       H        1   2   3   3   3   4   5   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     141       E    11   16   25       H        1   2   3   3   4   4   5   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     142       P    11   16   25       H        1   2   3   3   4   4   5   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     143       L    11   16   25       H        1   2   3   3   4   4   4   5   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     144       L    11   16   25       H        1   2   3   3   4   4   5   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     145       A    11   16   25       H        1   2   3   3   4   4   5   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     146       K    11   16   25       H        1   2   3   3   4   4   4   5   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     147       I    11   16   25       H        1   2   3   3   4   4   4   5   6   8  10  11  12  14  16  17  19  20  22  22  
 LCS     148       G    11   16   25       C        1   2   3   3   4   4   5   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     149       I    10   16   25       C        0   1   2   3   4   4   5   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     150       H     4   14   25       C        0   1   1   2   2   4   5   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     151       Q     6    8   25       E        0   1   1   2   2   3   3   5   5   7   8  11  12  14  16  17  19  20  22  22  
 LCS     152       Q     6    8   25       E        0   1   1   2   2   3   4   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     153       T     6    8   25       E        0   1   1   2   2   3   3   4   5   5   9  11  12  14  16  17  19  20  22  22  
 LCS     154       T     6    8   25       E        0   1   2   2   2   4   5   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     155       L     6    8   25       E        0   1   2   2   2   3   4   4   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     156       L     6    8   25       E        0   1   1   2   3   4   5   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     157       R     5    8   25       E        0   1   1   2   3   4   5   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS     158       H     3    3   25       C        0   1   1   2   3   4   5   6   8   9  10  11  13  14  16  17  19  20  22  22  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   0.60 
 
 NUMBER_OF_CA_Tg:  335      NUMBER_OF_CA_Pr:  115      PERCENT_OF_CA:  34.33  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max       6       9      11      12      18      19      23      26      29      32      36      40      46      50      56      60      65      69      74      77  
 GDT PERCENT_OF_CA_Pr    5.22    7.83    9.57   10.43   15.65   16.52   20.00   22.61   25.22   27.83   31.30   34.78   40.00   43.48   48.70   52.17   56.52   60.00   64.35   66.96 
 GDT PERCENT_OF_CA_Tg    1.79    2.69    3.28    3.58    5.37    5.67    6.87    7.76    8.66    9.55   10.75   11.94   13.73   14.93   16.72   17.91   19.40   20.60   22.09   22.99 
 GDT FRAGMENT: Beg-End 140-145 140-148 138-148 101-122  88-122  88-122  88-122  88-125  88-125  47-158  47-158  47-158  43-158  43-158  42-158  42-158  42-158  42-158  40-158  40-158 
 GDT RMS_LOCAL           0.20    0.57    0.81    1.16    1.88    1.98    2.49    2.69    2.96    3.53    3.89    4.15    4.68    4.87    5.50    5.53    5.92    6.21    6.59    6.71 
 GDT RMS_ALL_CA         27.14   25.77   25.34   21.86   21.82   21.84   22.37   22.02   22.22   14.04   13.64   13.77   13.19   13.37   13.41   13.01   13.02   12.87   12.76   12.82 
 
 
 TEST (CA)  RMS =  11.85               (Number of atoms:  115) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   11.85        115    34.3   335     CRMSCA  
     CRN = ALL/NP  . . . . .    0.1030                            CRMSCA  
     SECONDARY STRUCTURE . .   11.77         66    32.7   202     CRMSCA  
     SURFACE . . . . . . . .   12.30         54    33.5   161     CRMSCA  
     BURIED  . . . . . . . .   11.43         61    35.1   174     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   11.77        460    28.1  1639     CRMSMC  
     SECONDARY STRUCTURE . .   11.78        264    26.4  1000     CRMSMC  
     SURFACE . . . . . . . .   12.00        216    27.4   787     CRMSMC  
     BURIED  . . . . . . . .   11.57        244    28.6   852     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    0.00          0     0.0  1152     CRMSSC  
     RELIABLE SIDE CHAINS  .    0.00          0     0.0   936     CRMSSC  
     SECONDARY STRUCTURE . .    0.00          0     0.0   744     CRMSSC  
     SURFACE . . . . . . . .    0.00          0     0.0   570     CRMSSC  
     BURIED  . . . . . . . .    0.00          0     0.0   582     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   11.77        460    18.5  2492     CRMSALL 
     SECONDARY STRUCTURE . .   11.78        264    17.0  1552     CRMSALL 
     SURFACE . . . . . . . .   12.00        216    17.8  1214     CRMSALL 
     BURIED  . . . . . . . .   11.57        244    19.1  1278     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   10.579      1.000       0.500    115    34.3   335     ERRCA  
     SECONDARY STRUCTURE . .   10.530      1.000       0.500     66    32.7   202     ERRCA  
     SURFACE . . . . . . . .   10.994      1.000       0.500     54    33.5   161     ERRCA  
     BURIED  . . . . . . . .   10.211      1.000       0.500     61    35.1   174     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   10.526      1.000       0.500    460    28.1  1639     ERRMC  
     SECONDARY STRUCTURE . .   10.534      1.000       0.500    264    26.4  1000     ERRMC  
     SURFACE . . . . . . . .   10.686      1.000       0.500    216    27.4   787     ERRMC  
     BURIED  . . . . . . . .   10.385      1.000       0.500    244    28.6   852     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.000      0.000       0.000      0     0.0  1152     ERRSC  
     RELIABLE SIDE CHAINS  .    0.000      0.000       0.000      0     0.0   936     ERRSC  
     SECONDARY STRUCTURE . .    0.000      0.000       0.000      0     0.0   744     ERRSC  
     SURFACE . . . . . . . .    0.000      0.000       0.000      0     0.0   570     ERRSC  
     BURIED  . . . . . . . .    0.000      0.000       0.000      0     0.0   582     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   10.526      1.000       0.500    460    18.5  2492     ERRALL 
     SECONDARY STRUCTURE . .   10.534      1.000       0.500    264    17.0  1552     ERRALL 
     SURFACE . . . . . . . .   10.686      1.000       0.500    216    17.8  1214     ERRALL 
     BURIED  . . . . . . . .   10.385      1.000       0.500    244    19.1  1278     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         3         3        14        65     115     335   DISTCA 
CA  (P)      0.00      0.90      0.90      4.18     19.40             335   DISTCA 
CA  (RMS)    0.00      1.88      1.88      3.93      7.34                   DISTCA 
 
ALL (N)         0         5         9        50       263     460    2492   DISTALL 
ALL (P)      0.00      0.20      0.36      2.01     10.55            2492   DISTALL 
ALL (RMS)    0.00      1.84      2.24      3.91      7.31                   DISTALL 
 
 
 
 
END of the results output 
