 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
# WARNING! The number of residues in SS section: 0 0 , MODEL 0 , TARGET 335 
 
# WARNING! TARGET 2492 atoms, MODEL 773 atoms, 724 common with TARGET 
           Number of atoms possible to evaluate: 275 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   668     ARMSMC  
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   404     ARMSMC  
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   320     ARMSMC  
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   348     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   262     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   229     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   171     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   123     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   139     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   183     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   130     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   114     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    94     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    89     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    70     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    56     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    47     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    52     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    18     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    28     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    28     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    17     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    24     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     4     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1    8 - 47   40   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    40      8 - 47       4.76     4.76 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   51 - 69   19   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    19     51 - 69       4.80     4.80 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3   79 - 98   20   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    20     79 - 98       3.61     3.61 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  4  100 - 133  34   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    34    100 - 133      3.94     3.94 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  5  140 - 154  15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    15    140 - 154      1.05     1.05 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  6  169 - 183  15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    15    169 - 183      2.78     2.78 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  7  187 - 198  12   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    12    187 - 198      2.85     2.85 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  8  201 - 240  40   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    15    201 - 215      4.40    15.06 
  LCS LOCAL_SCORE:             32.88 
 
 FRAGMENT  9  244 - 255  12   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    12    244 - 255      4.89     4.89 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 10  272 - 339  68   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    54    278 - 331      4.88     9.16 
  LONGEST_CONTINUOUS_SEGMENT    54    279 - 332      4.98     9.16 
  LCS LOCAL_SCORE:             69.74 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1    8 - 47   40   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    19     12 - 30       2.00     7.33 
  LCS LOCAL_SCORE:             32.25 
 
 FRAGMENT  2   51 - 69   19   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    10     51 - 60       1.42    10.88 
  LCS LOCAL_SCORE:             42.66 
 
 FRAGMENT  3   79 - 98   20   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    11     79 - 89       2.00     6.18 
  LCS LOCAL_SCORE:             50.50 
 
 FRAGMENT  4  100 - 133  34   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    26    100 - 125      1.95     4.36 
  LCS LOCAL_SCORE:             63.15 
 
 FRAGMENT  5  140 - 154  15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    15    140 - 154      1.05     1.05 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  6  169 - 183  15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    10    174 - 183      1.95     3.85 
  LCS LOCAL_SCORE:             58.22 
 
 FRAGMENT  7  187 - 198  12   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     9    187 - 195      1.83     3.92 
  LCS LOCAL_SCORE:             69.44 
 
 FRAGMENT  8  201 - 240  40   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    12    201 - 212      1.49    16.02 
  LCS LOCAL_SCORE:             18.62 
 
 FRAGMENT  9  244 - 255  12   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     9    246 - 254      1.87     5.30 
  LONGEST_CONTINUOUS_SEGMENT     9    247 - 255      1.65     5.91 
  LCS LOCAL_SCORE:             68.06 
 
 FRAGMENT 10  272 - 339  68   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    21    280 - 300      1.98     9.28 
  LCS LOCAL_SCORE:             18.47 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1    8 - 47   40   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    13     18 - 30       0.96     8.59 
  LCS LOCAL_SCORE:             19.81 
 
 FRAGMENT  2   51 - 69   19   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     8     51 - 58       0.28    12.37 
  LCS LOCAL_SCORE:             29.64 
 
 FRAGMENT  3   79 - 98   20   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5     83 - 87       0.93     5.71 
  LONGEST_CONTINUOUS_SEGMENT     5     90 - 94       0.77    10.50 
  LCS LOCAL_SCORE:             22.00 
 
 FRAGMENT  4  100 - 133  34   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    19    100 - 118      0.97     4.97 
  LONGEST_CONTINUOUS_SEGMENT    19    101 - 119      0.96     4.72 
  LONGEST_CONTINUOUS_SEGMENT    19    102 - 120      0.97     4.50 
  LONGEST_CONTINUOUS_SEGMENT    19    103 - 121      0.97     4.37 
  LCS LOCAL_SCORE:             39.97 
 
 FRAGMENT  5  140 - 154  15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    14    140 - 153      0.95     1.11 
  LONGEST_CONTINUOUS_SEGMENT    14    141 - 154      0.99     1.07 
  LCS LOCAL_SCORE:             93.33 
 
 FRAGMENT  6  169 - 183  15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    171 - 175      0.86    12.41 
  LONGEST_CONTINUOUS_SEGMENT     5    178 - 182      0.99     8.46 
  LONGEST_CONTINUOUS_SEGMENT     5    179 - 183      0.76     6.51 
  LCS LOCAL_SCORE:             30.67 
 
 FRAGMENT  7  187 - 198  12   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6    190 - 195      0.80     4.29 
  LCS LOCAL_SCORE:             40.28 
 
 FRAGMENT  8  201 - 240  40   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    11    202 - 212      0.86    16.47 
  LCS LOCAL_SCORE:             14.38 
 
 FRAGMENT  9  244 - 255  12   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     8    247 - 254      0.99     5.74 
  LCS LOCAL_SCORE:             52.78 
 
 FRAGMENT 10  272 - 339  68   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    13    282 - 294      0.91     9.48 
  LCS LOCAL_SCORE:             11.38 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS       8       L     4    4   40       -        0   1   1   1   1   1  12  16  19  21  25  28  29  31  32  33  33  35  37  40  
 LCS       9       D     4    4   40       -        0   1   1   1   1  10  12  16  19  22  25  28  29  31  32  33  33  35  37  40  
 LCS      10       G     4    5   40       -        0   1   1   1   1   1   1   3   5  21  22  25  29  31  32  33  33  35  37  40  
 LCS      11       A     4    5   40       -        0   1   1   1   1   2  10  16  19  24  26  28  29  31  32  33  33  35  37  40  
 LCS      12       Q     4   19   40       -        0   1   1   1   1  11  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      13       G     4   19   40       -        0   1   3   5  11  13  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      14       E     4   19   40       -        0   1   2   6   8  13  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      15       G    12   19   40       -        0   2   5   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      16       G    12   19   40       -        1   2   3   7   8  10  13  16  20  25  26  28  29  31  32  33  33  35  37  40  
 LCS      17       G    12   19   40       -        1   2   3   4   7   9  11  13  17  21  25  28  29  31  32  33  33  35  37  40  
 LCS      18       Q    13   19   40       -        2   2   3   7   8  12  15  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      19       I    13   19   40       -        2   2   4   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      20       L    13   19   40       -        2   2   3   4   5  12  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      21       R    13   19   40       -        2   2   3   4   5  10  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      22       S    13   19   40       -        2   2   4   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      23       A    13   19   40       -        2   2   3   4  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      24       L    13   19   40       -        2   2   3   5  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      25       S    13   19   40       -        2   2   4   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      26       L    13   19   40       -        1   2   3   5  10  13  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      27       S    13   19   40       -        1   2   3   4   8  12  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      28       M    13   19   40       -        1   2   4   7  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      29       I    13   19   40       -        0   1   3   4   5   6  12  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      30       T    13   19   40       -        0   1   3   4   5   6  10  14  20  24  26  28  29  31  32  33  33  35  37  40  
 LCS      31       G     4   14   40       -        0   0   1   2   4  11  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      32       Q     7   10   40       -        0   1   2   5   6   8  13  17  21  25  26  28  29  31  32  33  33  35  37  40  
 LCS      33       P     7   10   40       -        0   1   3   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      34       F     7   10   40       -        0   1   3   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      35       T     7   10   40       -        1   1   2   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      36       I     7   10   40       -        2   4   6   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      37       T     7   10   40       -        1   1   7   8  10  12  16  18  22  25  26  28  29  31  32  33  33  35  37  40  
 LCS      38       S     7   10   40       -        1   4   6   8  10  14  16  19  22  25  26  28  29  31  32  33  33  35  37  40  
 LCS      39       I     3    9   40       -        0   0   1   1   2   2   2   3  18  21  25  27  28  31  32  33  33  35  37  40  
 LCS      40       R     4    9   40       -        1   1   1   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      41       A     4    6   40       -        1   1   1   1   4   5   7  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      42       G     4    6   40       -        1   1   1   1   1   2   3   8  20  23  26  28  29  31  32  33  33  35  37  40  
 LCS      43       R     4    6   40       -        1   1   3   5   9  13  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      44       A     3    5   40       -        0   0   1   1   2   2   5   8   8  11  13  15  28  31  32  33  33  35  37  40  
 LCS      45       K     3    4   40       -        0   0   1   1   2   2   5   8   8  11  13  28  29  31  32  33  33  35  37  40  
 LCS      46       P     3    4   40       -        0   0   1   1   1   2   3   5   6  11  13  15  17  20  22  32  33  34  35  37  
 LCS      47       G     3    4   40       -        0   0   1   1   1   1   1   6   7   9  12  15  17  31  32  32  33  34  37  40  
 LCS      48       L     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      49       L     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      50       R     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      51       Q     8   10   19       -        2   2   3   5  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      52       H     8   10   19       -        2   2   2   2   4   7  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      53       L     8   10   19       -        2   2   2   2   4  11  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      54       T     8   10   19       -        2   2   4   6  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      55       A     8   10   19       -        2   2   3   4   5  12  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      56       V     8   10   19       -        2   2   2   2   2   7  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      57       K     8   10   19       -        2   2   3   6  10  13  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      58       A     8   10   19       -        2   2   2   2   8  12  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      59       A     3   10   19       -        0   1   1   1   2   5   5   8  11  22  26  28  29  31  32  33  33  35  37  40  
 LCS      60       T     3   10   19       -        0   2   3   7  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      61       E     3    8   19       -        0   1   1   1   3   4   5   7   9  10  13  25  27  28  31  32  33  34  36  37  
 LCS      62       I     5    6   19       -        0   1   1   2   4   5   6   7   8   9  10  12  13  16  19  22  25  31  35  36  
 LCS      63       C     5    6   19       -        0   1   1   1   1   3   4   7   8   9  10  11  13  15  19  22  25  27  30  33  
 LCS      64       G     5    6   19       -        0   1   1   1   1   5   6   7   8   9  10  12  13  15  19  22  25  27  30  32  
 LCS      65       A     5    6   19       -        0   1   1   1   2   3   6   7   8   9  10  12  13  15  19  22  25  27  32  34  
 LCS      66       T     5    6   19       -        0   1   1   2   2   5   6   7   8   9  10  12  13  15  19  22  25  27  32  34  
 LCS      67       V     3    6   19       -        0   1   2   3   4   5   6   7   8   9  10  12  21  22  26  29  31  33  35  37  
 LCS      68       E     3    5   19       -        0   0   1   4   6   7   9  11  14  17  21  25  28  30  32  33  33  35  37  40  
 LCS      69       G     3    5   19       -        0   0   1   1   2   5   8  11  14  17  21  25  29  31  32  33  33  35  37  40  
 LCS      70       A     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      71       E     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      72       L     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      73       G     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      74       S     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      75       Q     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      76       R     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      77       L     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      78       L     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      79       F     3   11   20       -        0   0   1   2   3   5   6   7   8   9  10  14  21  24  26  28  30  31  33  36  
 LCS      80       R     4   11   20       -        0   0   1   2   3   3   3   6   8   9  10  12  13  16  24  25  28  30  32  34  
 LCS      81       P     4   11   20       -        0   0   1   3   4   5   6   7   8   9  10  12  13  16  19  22  25  30  32  34  
 LCS      82       G     4   11   20       -        0   1   1   2   3   3   3   7   8   9  10  12  13  15  19  22  25  30  32  34  
 LCS      83       T     5   11   20       -        0   1   1   2   4   5   6   7   8   9  10  12  13  15  19  22  25  27  30  34  
 LCS      84       V     5   11   20       -        0   1   2   3   4   5   6   7   8   9  10  12  13  16  19  22  28  30  32  34  
 LCS      85       R     5   11   20       -        0   1   2   3   4   5   6   7   8   9  10  12  13  16  19  22  25  27  30  34  
 LCS      86       G     5   11   20       -        0   1   2   3   4   5   6   7   8   9  10  12  13  16  19  22  25  27  30  34  
 LCS      87       G     5   11   20       -        0   1   2   3   4   5   6   7   8   9  10  12  13  16  18  20  25  27  32  34  
 LCS      88       D     4   11   20       -        0   1   2   3   4   5   6   7   8   9  10  12  13  16  18  20  22  27  32  34  
 LCS      89       Y     3   11   20       -        0   0   0   0   1   2   3   4   5   8  10  12  15  19  28  29  30  31  34  34  
 LCS      90       R     5    9   20       -        0   1   1   5   7  11  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      91       F     5    9   20       -        0   1   1   2   7  11  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      92       A     5    9   20       -        0   1   1   3   6  10  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      93       I     5    9   20       -        0   1   2   3   4   7  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      94       G     5    9   20       -        0   1   1   2   4   7  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      95       S     4    9   20       -        1   1   1   2   2   4   5   7  16  22  26  28  29  31  32  33  33  35  37  40  
 LCS      96       A     4    9   20       -        1   1   2   2   7  13  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      97       G     4    9   20       -        1   1   2   5  10  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      98       S     4    9   20       -        1   1   5   8  10  13  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS      99       C     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     100       T    19   26   34       -        1   2   5   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     101       L    19   26   34       -        1   3   6   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     102       V    19   26   34       -        1   4   6   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     103       L    19   26   34       -        1   4   6   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     104       Q    19   26   34       -        2   5   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     105       T    19   26   34       -        1   5   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     106       V    19   26   34       -        2   5   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     107       L    19   26   34       -        1   5   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     108       P    19   26   34       -        1   5   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     109       A    19   26   34       -        2   5   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     110       L    19   26   34       -        2   5   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     111       W    19   26   34       -        1   5   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     112       F    19   26   34       -        2   5   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     113       A    19   26   34       -        2   5   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     114       D    19   26   34       -        2   5   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     115       G    19   26   34       -        1   4   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     116       P    19   26   34       -        1   5   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     117       S    19   26   34       -        1   5   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     118       R    19   26   34       -        2   5   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     119       V    19   26   34       -        2   5   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     120       E    19   26   34       -        2   5   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     121       V    19   26   34       -        1   3   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     122       S     7   26   34       -        1   2   5   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     123       G     7   26   34       -        0   2   5   5  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     124       G     3   26   34       -        0   0   0   1   5   9  11  13  23  25  26  28  29  31  32  33  33  34  36  38  
 LCS     125       T     3   26   34       -        1   2   5   8  11  14  16  20  24  25  26  28  29  31  32  33  33  34  37  39  
 LCS     126       D     3   24   34       -        0   0   0   1   1   2  15  19  24  25  26  28  29  31  32  33  33  34  37  38  
 LCS     127       N     3    6   34       -        0   0   0   1   6  11  16  20  24  25  26  28  29  31  32  33  33  35  37  39  
 LCS     128       P     3    6   34       -        0   0   0   1   1   3   4   5   6  15  19  27  29  31  32  33  33  34  36  37  
 LCS     129       S     3    4   34       -        0   0   0   1   1   2   2   5   9  10  11  13  15  26  28  29  30  31  32  34  
 LCS     130       A     3    4   34       -        0   0   2   3   4   5   7   8  12  15  19  28  29  31  32  33  33  34  37  39  
 LCS     131       P     3    4   34       -        0   0   0   1   1   2   4   7  12  15  26  28  29  31  32  33  33  35  37  40  
 LCS     132       P     3    3   34       -        0   0   0   3   4   6   8  11  14  16  26  28  29  31  32  33  33  35  37  40  
 LCS     133       A     3    3   34       -        0   0   0   0   3   6   8  11  14  17  22  25  29  31  32  33  33  35  37  40  
 LCS     134       D     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     135       F     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     136       I     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     137       R     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     138       R     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     139       V     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     140       L    14   15   15       -        2   3   3   4   8  13  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     141       E    14   15   15       -        2   3   4   7  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     142       P    14   15   15       -        2   3   3   6   8  13  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     143       L    14   15   15       -        2   3   3   4   8  13  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     144       L    14   15   15       -        2   3   4   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     145       A    14   15   15       -        2   3   5   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     146       K    14   15   15       -        2   3   3   7  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     147       I    14   15   15       -        2   3   5   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     148       G    14   15   15       -        2   3   6   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     149       I    14   15   15       -        2   5   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     150       H    14   15   15       -        1   4   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     151       Q    14   15   15       -        2   5   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     152       Q    14   15   15       -        0   5   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     153       T    14   15   15       -        0   5   7   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     154       T    14   15   15       -        0   2   5   8  11  14  16  20  24  25  26  28  29  31  32  33  33  35  37  40  
 LCS     155       L     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     156       L     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     157       R     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     158       H     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     159       G     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     160       F     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     161       Y     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     162       P     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     163       A     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     164       G     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     165       G     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     166       G     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     167       V     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     168       V     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     169       A     3    3   15       -        0   1   1   1   2   2   3   4   7   7  22  27  29  31  32  33  33  35  37  40  
 LCS     170       T     3    7   15       -        0   0   1   2   2   3   4   5  11  14  20  25  27  29  32  33  33  35  37  40  
 LCS     171       E     5    7   15       -        1   1   1   1   2   3   4   5   6   7  10  11  13  14  25  26  31  34  36  40  
 LCS     172       V     5    7   15       -        1   1   1   1   2   3   4   5   6   7  10  11  13  14  24  26  28  33  36  40  
 LCS     173       S     5    7   15       -        1   1   1   1   2   3   4   5   6   7   8  11  13  14  25  26  28  33  36  40  
 LCS     174       P     5   10   15       -        1   1   1   2   2   3   4   5   6   6  10  11  13  14  25  26  28  33  37  40  
 LCS     175       V     5   10   15       -        0   1   1   2   2   3   4   5   7   9  10  11  13  22  25  29  32  35  37  40  
 LCS     176       A     4   10   15       -        0   1   1   1   2   3   4   5   6   7   9  11  13  14  25  29  32  35  37  40  
 LCS     177       S     4   10   15       -        0   1   1   2   2   3   4   5   6   7   8  10  11  13  16  20  23  25  37  40  
 LCS     178       F     5   10   15       -        0   1   1   2   2   3   3   5   6   7   8  10  11  13  27  30  33  35  37  40  
 LCS     179       N     5   10   15       -        0   1   1   2   2   3   4   5   6   7   8  10  11  13  16  22  31  35  37  40  
 LCS     180       T     5   10   15       -        1   1   1   2   2   3   4   5   6   7   8  10  11  13  16  29  33  35  37  40  
 LCS     181       L     5   10   15       -        1   1   1   2   2   3   4   5   6   7   8  11  13  27  32  33  33  35  37  40  
 LCS     182       Q     5   10   15       -        1   1   1   2   2   3   3   5   6   7   7  10  20  24  30  33  33  35  37  40  
 LCS     183       L     5   10   15       -        1   1   1   2   2   3   3   5  14  16  18  24  26  30  32  33  33  35  37  40  
 LCS     184       G     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     185       E     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     186       R     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     187       G     3    9   12       -        0   0   0   2   2   2   2   3   3   4   6   9  11  13  16  19  21  24  26  27  
 LCS     188       N     4    9   12       -        1   1   1   2   2   2   2   3   3   4   6   6   7   8  14  17  19  24  26  27  
 LCS     189       I     4    9   12       -        1   1   1   1   2   2   2   3   4   4   6   6   7  13  14  17  19  24  29  40  
 LCS     190       V     6    9   12       -        1   1   1   2   2   2   2   3   4   4   6   6   7   8   8   9  12  22  24  27  
 LCS     191       Q     6    9   12       -        1   1   1   2   2   2   2   3   4   4   6   6   7   8  14  15  17  22  24  27  
 LCS     192       M     6    9   12       -        1   1   1   2   2   2   2   3   4   4   6   6   7   8  15  15  16  17  24  27  
 LCS     193       R     6    9   12       -        1   1   1   2   2   2   2   3   5   7   9  11  13  14  15  17  19  24  26  27  
 LCS     194       G     6    9   12       -        1   1   1   2   2   2   2   3   4   5   6   7  13  14  15  17  21  24  26  27  
 LCS     195       E     6    9   12       -        1   1   1   2   2   2   2   3   4   4   6   7   9  13  16  19  21  24  36  40  
 LCS     196       V     4    8   12       -        0   1   1   1   1   1   2   3   4   4   8  17  21  24  27  29  31  35  37  40  
 LCS     197       L     4    8   12       -        0   1   1   2   2   2   3   4   5   6   8   9  11  13  14  25  30  34  37  40  
 LCS     198       L     3    3   12       -        0   0   0   1   2   2   3   4   5   6   8   9  11  13  14  17  19  21  23  25  
 LCS     199       A     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     200       G     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     201       V     3   12   15       -        0   0   0   0   2   3   3   3   4   4   4   4   5   8  10  11  11  14  23  25  
 LCS     202       P    11   12   15       -        1   1   2   3   3   3   3   3   4   4   4   5   6   7  10  11  19  21  23  25  
 LCS     203       R    11   12   15       -        2   2   2   3   3   3   3   4   5   6   8   9  11  13  14  17  19  21  23  25  
 LCS     204       H    11   12   15       -        2   2   2   3   3   3   3   3   5   6   8   9  11  13  14  17  19  21  23  25  
 LCS     205       V    11   12   15       -        2   2   2   3   3   3   4   4   5   6   6   8   9  10  11  12  13  19  21  35  
 LCS     206       A    11   12   15       -        2   2   2   3   3   3   3   3   4   4   4   5   7   8   8   9  26  30  33  38  
 LCS     207       E    11   12   15       -        2   2   2   3   3   3   3   3   4   4   4   5   5   5  14  17  19  21  24  27  
 LCS     208       R    11   12   15       -        2   2   2   3   3   3   3   3   5   5   6   8   9  10  12  15  26  29  33  36  
 LCS     209       E    11   12   15       -        2   2   2   3   3   3   3   3   4   4   4   5   5   5   6  15  18  29  31  35  
 LCS     210       I    11   12   15       -        2   2   2   3   3   3   3   3   4   4   4   5   5   5   5   6   6  14  15  16  
 LCS     211       A    11   12   15       -        1   2   2   3   3   3   3   3   4   4   4   5   5   5   5   9  11  14  15  22  
 LCS     212       T    11   12   15       -        0   1   2   3   3   3   3   3   4   4   4   4   5   5   5   6  18  19  31  35  
 LCS     213       L     3    4   15       -        0   0   0   0   1   1   2   3   4   4   4   4   5   5   5   5   5   6   6  22  
 LCS     214       A     3    4   15       -        0   0   0   0   1   1   5   5   6   7   8   9  10  11  23  27  30  34  37  40  
 LCS     215       G     3    4   15       -        0   0   0   2   3   4   6   9  12  14  15  19  22  26  28  30  33  35  37  40  
 LCS     216       S     3    5   11       -        0   0   0   1   1   1   2   2   2   3   4   5   5   6   6   9  21  24  26  40  
 LCS     217       F     3    5   11       -        0   0   0   1   1   2   2   2   2   3   4   9  11  13  16  30  33  35  37  40  
 LCS     218       S     3    5   11       -        0   0   0   1   1   1   2   2   2   3   4   5  11  12  16  20  31  35  37  40  
 LCS     219       L     3    6   11       -        0   0   1   1   2   4   4   5   5   8  10  11  21  25  28  31  33  35  37  40  
 LCS     220       H     4    6   11       -        0   1   1   1   1   1   2   4   7   8  11  12  13  14  18  20  22  34  37  40  
 LCS     221       E     4    6   13       -        0   1   1   1   1   1   2   3   5   5  11  12  12  14  15  16  21  34  37  40  
 LCS     222       Q     4    6   13       -        0   1   1   1   1   1   2   2   2   3   6   8  12  14  15  16  18  19  29  32  
 LCS     223       N     4    6   13       -        0   1   1   1   1   1   2   3   4   4   4   8   8  10  11  12  31  35  37  40  
 LCS     224       I     4    6   13       -        0   1   1   1   1   1   2   2   3   3  14  19  23  26  28  31  33  35  37  40  
 LCS     225       H     4    6   13       -        0   1   1   1   2   2   2   3   3   6   8   9  11  23  26  29  31  35  37  40  
 LCS     226       N     3    4   13       -        0   0   0   1   2   2   2   2   3   3   4   4   4   5   5  17  19  21  23  25  
 LCS     227       L     3    4   13       -        0   0   0   1   2   2   2   2   3   3   4   5   5   5  11  12  18  19  21  22  
 LCS     228       P     5    6   13       -        0   1   1   1   1   2   2   2   3   3   4   5   5   5   5   6   6  14  14  15  
 LCS     229       R     5    6   13       -        1   1   1   1   2   2   2   2   3   3   6   6   6   8  10  11  11  14  14  15  
 LCS     230       D     5    6   13       -        1   1   1   1   2   2   2   2   3   3   4   5   7   8  10  11  11  14  14  15  
 LCS     231       Q     5    6   13       -        1   1   1   1   2   2   2   2   3   3   4   5   5   5   5   6   6   6   7   8  
 LCS     232       G     5    6   13       -        1   1   1   1   2   2   2   2   3   3   4   5   5   5   5   6   6   6   7   8  
 LCS     233       P     3    6   13       -        0   0   1   1   1   2   2   2   3   3   4   5   5   5   5   6   6   6   7  12  
 LCS     234       G     3    5   13       -        0   0   1   1   1   2   2   3   4   4   4   5   5   5   5   6   6   6   7   8  
 LCS     235       N     4    6   12       -        0   0   1   1   2   2   3   3   4   4   4   5   5   5   6   6   6   6   7   9  
 LCS     236       T     4    6   12       -        0   0   1   1   2   2   2   3   4   4   4   4   5   5   6   6   7   8   8   9  
 LCS     237       V     4    6   12       -        0   1   2   2   3   3   3   3   4   4   4   5   5   5   6   6   7   8   8   9  
 LCS     238       S     4    6   12       -        0   1   1   1   1   2   2   3   3   4   4   4   5   5   6   7   7   8   8   9  
 LCS     239       L     4    6    8       -        0   1   1   1   1   2   3   3   4   4   4   5   5   5   6   7   7   8   8   9  
 LCS     240       E     4    6    8       -        0   1   1   1   1   2   2   3   3   4   4   4   5   5   5   8   8  10  10  11  
 LCS     241       V     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     242       E     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     243       S     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     244       E     3    4   12       -        0   0   0   1   1   1   3   3   5   8  25  28  29  31  32  33  33  34  36  37  
 LCS     245       N     3    4   12       -        0   0   0   1   1   1   3   3   6   8  12  28  29  31  32  33  33  34  36  37  
 LCS     246       I     3    9   12       -        0   0   0   1   2   2   3   5  10  14  20  28  29  31  32  33  33  35  37  40  
 LCS     247       T     8    9   12       -        1   1   2   2   2   2   3   3   3   8  10  12  20  22  23  27  31  35  37  40  
 LCS     248       E     8    9   12       -        1   2   2   2   2   2   3   3   3   4   4   5   5   5  18  23  26  30  32  36  
 LCS     249       R     8    9   12       -        1   2   2   2   2   2   3   3   3   4   4   5   5   5   6   6   6   6  25  32  
 LCS     250       F     8    9   12       -        1   2   2   2   2   2   3   3   3   4   4   5   5   5   6   7   7   7   8   9  
 LCS     251       F     8    9   12       -        1   2   2   2   2   2   3   3   3   4   4   5   5   5   6   7   7   8   8   9  
 LCS     252       V     8    9   12       -        1   2   2   2   2   2   3   3   3   4   4   5   5   5   6   6   7   8   8   9  
 LCS     253       V     8    9   12       -        1   2   2   2   2   2   3   3   3   4   4   5   5   5   6   6   7   8   8   9  
 LCS     254       G     8    9   12       -        0   2   2   2   2   2   3   3   3   4   4   5   5   5   6   6   7   8   8   9  
 LCS     255       E     3    9   12       -        0   0   0   1   1   2   2   3   3   4   4   5   5   5   6   6   6   7   7   8  
 LCS     256       K     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     257       R     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     258       V     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     259       S     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     260       A     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     261       E     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     262       V     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     263       V     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     264       A     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     265       A     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     266       Q     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     267       L     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     268       V     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     269       K     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     270       E     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     271       V     0    0    0       -        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     272       K     3    3   15       -        0   0   0   0   1   1   1   1   2   2   2   3   4   4   4   5   5   6   6   7  
 LCS     273       R     3    3   15       -        0   0   0   0   1   1   1   2   2   2   3   3   4   4   5   6   6   7   7   7  
 LCS     274       Y     3    3   15       -        0   0   0   0   1   1   1   2   2   2   3   3   4   4   5   6   6   7   7   7  
 LCS     275       L     3    5   15       -        0   0   0   1   1   1   2   2   2   3   3   4   4   4   5   6   7   9  10  14  
 LCS     276       A     4    6   15       -        1   1   1   1   1   1   2   2   2   3   3   4   4   4   5   6   7   9  13  29  
 LCS     277       S     4    6   47       -        1   1   1   1   1   2   2   2   4   6   9   9  11  12  14  15  16  17  28  29  
 LCS     278       T     4    6   54       -        1   1   1   1   1   2   5   6   8   9  11  12  13  14  15  16  18  19  25  26  
 LCS     279       A     4    6   54       -        1   1   1   1   1   3   5   8   8  10  11  12  14  14  15  16  18  19  20  20  
 LCS     280       A     4   21   54       -        0   1   2   5   5   5   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     281       V     4   21   54       -        0   0   1   1   3   5   6   8   9  10  11  12  14  14  15  16  18  25  28  29  
 LCS     282       G    13   21   54       -        1   3   3   4   5   6   7   8   9  10  11  12  14  14  20  21  25  28  28  31  
 LCS     283       E    13   21   54       -        1   3   3   4   5   6   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     284       Y    13   21   54       -        1   3   3   5   5   6   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     285       L    13   21   54       -        1   3   3   5   5   6   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     286       A    13   21   54       -        1   3   3   5   5   6   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     287       D    13   21   54       -        1   3   3   5   5   6   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     288       Q    13   21   54       -        1   3   3   5   5   6   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     289       L    13   21   54       -        1   3   3   5   5   6   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     290       V    13   21   54       -        1   3   3   5   5   6   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     291       L    13   21   54       -        1   3   3   5   5   6   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     292       P    13   21   54       -        1   3   3   5   5   6   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     293       M    13   21   54       -        1   3   3   5   5   6   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     294       A    13   21   54       -        1   1   3   5   5   6   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     295       L     9   21   54       -        1   2   3   5   5   6   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     296       A     6   21   54       -        1   2   3   5   5   6   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     297       G     3   21   54       -        0   0   1   2   4   5   6   7   8  10  11  12  14  14  15  16  18  19  20  20  
 LCS     298       A     3   21   54       -        0   1   3   5   5   6   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     299       G     3   21   54       -        0   1   3   5   5   6   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     300       E     3   21   54       -        0   1   3   5   5   6   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     301       F     3    3   54       -        0   0   0   0   1   2   6   7   8  10  11  12  14  14  15  16  17  19  20  20  
 LCS     302       T     3    3   54       -        0   0   0   0   1   3   6   7   8  10  11  12  14  14  15  16  17  19  20  20  
 LCS     303       V     3    4   54       -        0   0   1   1   1   5   6   7   8  10  11  12  14  14  15  16  18  19  20  20  
 LCS     304       A     3    4   54       -        0   0   1   2   3   5   6   7   8  10  11  12  14  14  15  16  18  19  20  20  
 LCS     305       H     3    5   54       -        0   1   2   4   5   5   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     306       P     5    5   54       -        0   0   1   1   1   2   4   7   8  10  11  12  14  14  15  16  18  19  20  20  
 LCS     307       S     5    5   54       -        0   1   1   3   4   5   6   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     308       C     5    5   54       -        0   1   1   1   2   3   4   6   8  10  11  12  14  14  15  16  18  19  20  20  
 LCS     309       H     5   14   54       -        0   1   1   1   2   3   5   8   8  10  11  12  14  14  15  16  18  19  20  20  
 LCS     310       L    12   14   54       -        2   3   3   3   4   4   4   6   8  10  11  12  14  14  15  16  18  19  20  20  
 LCS     311       L    12   14   54       -        2   3   3   3   4   5   6   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     312       T    12   14   54       -        2   3   3   3   4   4   5   6   7   8  10  11  12  14  15  16  18  19  20  20  
 LCS     313       N    12   14   54       -        2   3   3   3   4   4   4   5   5   8  10  11  12  14  15  16  18  19  20  20  
 LCS     314       I    12   14   54       -        2   3   3   3   4   4   5   8   8  10  11  12  14  14  15  16  18  19  20  20  
 LCS     315       A    12   14   54       -        2   3   3   3   4   4   5   6   8   9  11  12  14  14  15  16  18  19  20  20  
 LCS     316       V    12   14   54       -        2   3   3   3   4   4   5   5   7   8   8  10  11  14  15  16  17  19  20  20  
 LCS     317       V    12   14   54       -        2   3   3   3   4   4   4   6   8   9  11  12  14  14  15  16  18  19  20  20  
 LCS     318       E    12   14   54       -        2   3   3   3   4   5   6   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     319       R    12   14   54       -        2   3   3   3   4   4   4   4   4   8  11  12  14  14  15  16  18  19  20  20  
 LCS     320       F    12   14   54       -        1   3   3   3   4   4   5   6   8   9  11  12  14  14  15  16  18  19  20  20  
 LCS     321       L    12   14   54       -        0   2   3   3   4   4   5   8   8  10  11  12  14  14  15  16  18  19  20  20  
 LCS     322       P     3   14   54       -        0   1   2   3   4   4   5   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     323       V     5    8   54       -        0   1   1   3   5   6   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     324       R     7    8   54       -        0   1   2   2   5   6   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     325       F     7    8   54       -        1   1   2   2   4   5   5   7   8  10  11  12  14  14  15  16  18  19  20  20  
 LCS     326       S     7    8   54       -        1   1   2   2   4   6   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     327       L     7    8   54       -        1   1   2   2   4   5   6   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     328       I     7    8   54       -        1   1   2   2   2   5   6   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     329       E     7    8   54       -        1   1   2   2   2   5   6   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     330       T     7    8   54       -        0   1   2   2   3   6   7   8   9  10  11  12  14  14  15  16  18  19  20  20  
 LCS     331       D     4    9   54       -        0   0   1   1   1   2   3   4   5   6   8  10  12  13  14  16  18  19  20  20  
 LCS     332       G     7    9   54       -        1   1   2   2   2   2   3   4   5   5   8   9  11  13  14  16  18  19  20  20  
 LCS     333       V     7    9   19       -        1   1   2   2   2   2   3   4   5   5   7   9  11  13  14  16  17  19  20  20  
 LCS     334       T     7    9   19       -        1   1   2   2   2   2   3   4   6   7   9  10  11  13  14  16  18  19  20  20  
 LCS     335       R     7    9   19       -        1   1   2   2   2   2   3   4   6   7   9  10  11  13  14  16  18  19  20  20  
 LCS     336       V     7    9   19       -        1   1   2   2   2   2   3   4   5   5   9   9  11  13  14  16  17  19  20  20  
 LCS     337       S     7    9   19       -        1   1   2   2   2   2   2   4   6   7   9  10  12  13  14  16  18  19  20  20  
 LCS     338       I     7    9   19       -        1   1   2   2   2   2   2   4   5   7   9  10  12  13  14  16  18  19  20  20  
 LCS     339       E     5    9   19       -        1   1   2   2   2   2   2   4   5   5   8   9  11  12  14  16  17  18  20  20  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   1.91 
 
 NUMBER_OF_CA_Tg:  335      NUMBER_OF_CA_Pr:  275      PERCENT_OF_CA:  82.09  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max      10      18      24      30      38      47      56      69      82      86      88      94     100     106     109     112     113     118     125     134  
 GDT PERCENT_OF_CA_Pr    3.64    6.55    8.73   10.91   13.82   17.09   20.36   25.09   29.82   31.27   32.00   34.18   36.36   38.55   39.64   40.73   41.09   42.91   45.45   48.73 
 GDT PERCENT_OF_CA_Tg    2.99    5.37    7.16    8.96   11.34   14.03   16.72   20.60   24.48   25.67   26.27   28.06   29.85   31.64   32.54   33.43   33.73   35.22   37.31   40.00 
 GDT FRAGMENT: Beg-End 104-151 104-153  37-153  15-151  15-153  15-154  13-154  12-154  12-154  12-154  12-154  11-154   8-245   8-246   8-246   8-183   8-246   8-246   8-247   8-247 
 GDT RMS_LOCAL           0.35    0.67    0.91    1.38    1.69    2.09    2.38    2.81    3.13    3.25    3.32    3.62    3.97    4.22    4.34    4.57    4.52    5.74    6.06    6.60 
 GDT RMS_ALL_CA         22.89   22.92   22.93   23.03   23.10   23.26   23.44   23.61   23.51   23.49   23.46   23.55   23.65   23.64   23.65   23.82   23.60   24.68   24.83   25.25 
 
 
 TEST (CA)  RMS =  21.13               (Number of atoms:  275) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   21.13        275    82.1   335     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0768                            CRMSCA  
     SECONDARY STRUCTURE . .   20.57        174    86.1   202     CRMSCA  
     SURFACE . . . . . . . .   22.20        127    78.9   161     CRMSCA  
     BURIED  . . . . . . . .   20.16        148    85.1   174     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   21.13        275    16.8  1639     CRMSMC  
     SECONDARY STRUCTURE . .   20.57        174    17.4  1000     CRMSMC  
     SURFACE . . . . . . . .   22.20        127    16.1   787     CRMSMC  
     BURIED  . . . . . . . .   20.16        148    17.4   852     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    0.00          0     0.0  1152     CRMSSC  
     RELIABLE SIDE CHAINS  .    0.00          0     0.0   936     CRMSSC  
     SECONDARY STRUCTURE . .    0.00          0     0.0   744     CRMSSC  
     SURFACE . . . . . . . .    0.00          0     0.0   570     CRMSSC  
     BURIED  . . . . . . . .    0.00          0     0.0   582     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   21.13        275    11.0  2492     CRMSALL 
     SECONDARY STRUCTURE . .   20.57        174    11.2  1552     CRMSALL 
     SURFACE . . . . . . . .   22.20        127    10.5  1214     CRMSALL 
     BURIED  . . . . . . . .   20.16        148    11.6  1278     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   18.959      1.000       0.500    275    82.1   335     ERRCA  
     SECONDARY STRUCTURE . .   18.395      1.000       0.500    174    86.1   202     ERRCA  
     SURFACE . . . . . . . .   19.966      1.000       0.500    127    78.9   161     ERRCA  
     BURIED  . . . . . . . .   18.095      1.000       0.500    148    85.1   174     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   18.959      1.000       0.500    275    16.8  1639     ERRMC  
     SECONDARY STRUCTURE . .   18.395      1.000       0.500    174    17.4  1000     ERRMC  
     SURFACE . . . . . . . .   19.966      1.000       0.500    127    16.1   787     ERRMC  
     BURIED  . . . . . . . .   18.095      1.000       0.500    148    17.4   852     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.000      0.000       0.000      0     0.0  1152     ERRSC  
     RELIABLE SIDE CHAINS  .    0.000      0.000       0.000      0     0.0   936     ERRSC  
     SECONDARY STRUCTURE . .    0.000      0.000       0.000      0     0.0   744     ERRSC  
     SURFACE . . . . . . . .    0.000      0.000       0.000      0     0.0   570     ERRSC  
     BURIED  . . . . . . . .    0.000      0.000       0.000      0     0.0   582     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   18.959      1.000       0.500    275    11.0  2492     ERRALL 
     SECONDARY STRUCTURE . .   18.395      1.000       0.500    174    11.2  1552     ERRALL 
     SURFACE . . . . . . . .   19.966      1.000       0.500    127    10.5  1214     ERRALL 
     BURIED  . . . . . . . .   18.095      1.000       0.500    148    11.6  1278     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         0         1         4        40     275     335   DISTCA 
CA  (P)      0.00      0.00      0.30      1.19     11.94             335   DISTCA 
CA  (RMS)    0.00      0.00      2.37      3.85      7.91                   DISTCA 
 
ALL (N)         0         0         1         4        40     275    2492   DISTALL 
ALL (P)      0.00      0.00      0.04      0.16      1.61            2492   DISTALL 
ALL (RMS)    0.00      0.00      2.37      3.85      7.91                   DISTALL 
 
 
 
 
END of the results output 
