 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
# WARNING! The number of residues in SS section: 174 , MODEL 174 , TARGET 335 
#          The number of residues possible to evaluate: 174 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP     5     M     C     C             1.00 
 SSP     6     I     E     E             1.00 
 SSP     7     A     E     E             1.00 
 SSP     8     L     E     E             1.00 
 SSP     9     D     E     C             1.00 
 SSP  BREAK 
 SSP    17     G     H     C             1.00 
 SSP    18     Q     H     H             1.00 
 SSP    19     I     H     H             1.00 
 SSP    20     L     H     H             1.00 
 SSP    21     R     H     H             1.00 
 SSP    22     S     H     H             1.00 
 SSP    23     A     H     H             1.00 
 SSP    24     L     H     H             1.00 
 SSP    25     S     H     H             1.00 
 SSP    26     L     H     H             1.00 
 SSP    27     S     H     C             1.00 
 SSP  BREAK 
 SSP    29     I     H     C             1.00 
 SSP    30     T     H     E             1.00 
 SSP    31     G     C     E             1.00 
 SSP    32     Q     C     E             1.00 
 SSP    33     P     C     C             1.00 
 SSP  BREAK 
 SSP    35     T     E     C             1.00 
 SSP    36     I     E     E             1.00 
 SSP    37     T     E     E             1.00 
 SSP    38     S     C     E             1.00 
 SSP    39     I     C     E             1.00 
 SSP    40     R     C     E             1.00 
 SSP    41     A     C     E             1.00 
 SSP    42     G     C     C             1.00 
 SSP  BREAK 
 SSP    47     G     C     C             1.00 
 SSP    48     L     C     E             1.00 
 SSP    49     L     C     E             1.00 
 SSP    50     R     H     E             1.00 
 SSP    51     Q     H     C             1.00 
 SSP  BREAK 
 SSP    56     V     H     C             1.00 
 SSP    57     K     H     H             1.00 
 SSP    58     A     H     H             1.00 
 SSP    59     A     H     H             1.00 
 SSP    60     T     H     H             1.00 
 SSP    61     E     H     H             1.00 
 SSP    62     I     H     H             1.00 
 SSP    63     C     H     C             1.00 
 SSP  BREAK 
 SSP    69     G     C     C             1.00 
 SSP    70     A     C     E             1.00 
 SSP    71     E     C     E             1.00 
 SSP    72     L     C     E             1.00 
 SSP    73     G     C     E             1.00 
 SSP    74     S     C     E             1.00 
 SSP    75     Q     C     E             1.00 
 SSP    76     R     C     E             1.00 
 SSP    77     L     E     E             1.00 
 SSP    78     L     E     C             1.00 
 SSP  BREAK 
 SSP    87     G     C     C             1.00 
 SSP    88     D     E     H             1.00 
 SSP    89     Y     E     H             1.00 
 SSP    90     R     E     H             1.00 
 SSP    91     F     E     H             1.00 
 SSP    92     A     E     C             1.00 
 SSP  BREAK 
 SSP    99     C     H     C             1.00 
 SSP   100     T     H     E             1.00 
 SSP   101     L     H     E             1.00 
 SSP   102     V     H     E             1.00 
 SSP   103     L     H     E             1.00 
 SSP   104     Q     H     E             1.00 
 SSP   105     T     H     E             1.00 
 SSP   106     V     H     E             1.00 
 SSP   107     L     H     E             1.00 
 SSP   108     P     H     E             1.00 
 SSP  BREAK 
 SSP   110     L     H     H             1.00 
 SSP   111     W     C     H             1.00 
 SSP   112     F     C     H             1.00 
 SSP   113     A     C     H             1.00 
 SSP   114     D     C     H             1.00 
 SSP   115     G     C     C             1.00 
 SSP  BREAK 
 SSP   119     V     E     C             1.00 
 SSP   120     E     E     C             1.00 
 SSP   121     V     E     C             1.00 
 SSP   122     S     E     C             1.00 
 SSP  BREAK 
 SSP   133     A     C     H             1.00 
 SSP   134     D     H     H             1.00 
 SSP   135     F     H     H             1.00 
 SSP   136     I     H     H             1.00 
 SSP   137     R     H     H             1.00 
 SSP   138     R     H     H             1.00 
 SSP   139     V     C     H             1.00 
 SSP   140     L     H     H             1.00 
 SSP   141     E     H     H             1.00 
 SSP   142     P     H     H             1.00 
 SSP   143     L     H     H             1.00 
 SSP   144     L     H     H             1.00 
 SSP   145     A     H     H             1.00 
 SSP   146     K     H     H             1.00 
 SSP   147     I     H     H             1.00 
 SSP   148     G     C     H             1.00 
 SSP   149     I     C     H             1.00 
 SSP   150     H     C     C             1.00 
 SSP  BREAK 
 SSP   168     V     E     C             1.00 
 SSP   169     A     E     E             1.00 
 SSP   170     T     E     E             1.00 
 SSP   171     E     E     C             1.00 
 SSP  BREAK 
 SSP   180     T     C     C             1.00 
 SSP   181     L     E     E             1.00 
 SSP   182     Q     E     E             1.00 
 SSP   183     L     C     C             1.00 
 SSP  BREAK 
 SSP   204     H     H     C             1.00 
 SSP   205     V     H     H             1.00 
 SSP   206     A     H     H             1.00 
 SSP   207     E     H     H             1.00 
 SSP   208     R     H     H             1.00 
 SSP   209     E     H     H             1.00 
 SSP   210     I     H     H             1.00 
 SSP   211     A     H     H             1.00 
 SSP   212     T     H     H             1.00 
 SSP   213     L     H     H             1.00 
 SSP   214     A     H     H             1.00 
 SSP   215     G     H     C             1.00 
 SSP  BREAK 
 SSP   239     L     E     C             1.00 
 SSP   240     E     E     E             1.00 
 SSP   241     V     E     E             1.00 
 SSP   242     E     E     C             1.00 
 SSP  BREAK 
 SSP   245     N     C     C             1.00 
 SSP   246     I     C     E             1.00 
 SSP   247     T     E     E             1.00 
 SSP   248     E     E     E             1.00 
 SSP   249     R     E     E             1.00 
 SSP   250     F     E     E             1.00 
 SSP   251     F     E     E             1.00 
 SSP   252     V     E     E             1.00 
 SSP   253     V     E     C             1.00 
 SSP  BREAK 
 SSP   256     K     C     C             1.00 
 SSP   257     R     C     E             1.00 
 SSP   258     V     C     E             1.00 
 SSP   259     S     C     E             1.00 
 SSP   260     A     H     E             1.00 
 SSP   261     E     H     C             1.00 
 SSP   262     V     H     E             1.00 
 SSP   263     V     H     E             1.00 
 SSP   264     A     H     E             1.00 
 SSP   265     A     H     E             1.00 
 SSP   266     Q     H     C             1.00 
 SSP  BREAK 
 SSP   268     V     H     C             1.00 
 SSP   269     K     H     E             1.00 
 SSP   270     E     H     E             1.00 
 SSP   271     V     H     E             1.00 
 SSP   272     K     H     C             1.00 
 SSP  BREAK 
 SSP   274     Y     H     C             1.00 
 SSP   275     L     C     E             1.00 
 SSP   276     A     C     E             1.00 
 SSP   277     S     C     C             1.00 
 SSP  BREAK 
 SSP   280     A     C     C             1.00 
 SSP   281     V     E     H             1.00 
 SSP   282     G     C     H             1.00 
 SSP   283     E     H     H             1.00 
 SSP   284     Y     H     H             1.00 
 SSP   285     L     H     H             1.00 
 SSP   286     A     H     H             1.00 
 SSP   287     D     H     H             1.00 
 SSP   288     Q     H     H             1.00 
 SSP   289     L     H     H             1.00 
 SSP   290     V     H     H             1.00 
 SSP   291     L     H     C             1.00 
 SSP   292     P     H     C             1.00 
 SSP   293     M     H     C             1.00 
 SSP  BREAK 
 SSP   300     E     E     C             1.00 
 SSP   301     F     E     E             1.00 
 SSP   302     T     E     E             1.00 
 SSP   303     V     E     E             1.00 
 SSP   304     A     C     E             1.00 
 SSP   305     H     C     C             1.00 
 SSP  BREAK 
 SSP   324     R     C     C             1.00 
 SSP   325     F     E     E             1.00 
 SSP   326     S     E     E             1.00 
 SSP   327     L     E     E             1.00 
 SSP   328     I     E     C             1.00 
 SSP  BREAK 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              50.0      56.6     54.5     34.0     51.9 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        54.4      60.1     65.3     34.0     51.9 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG           18              82.5              17.5 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 1 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00     174    100.0     50.0 
 
 BIN  0.00 - 1.00      1.00     174    100.0     50.0 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
# WARNING! The number of residues with CB atom coordinates: MODEL 0 , TARGET 299 
 
# WARNING! TARGET 2492 atoms, MODEL 1965 atoms, 1860 common with TARGET 
           Number of atoms possible to evaluate: 696 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    69.42           58.6   302    45.2   668     ARMSMC  
     SECONDARY STRUCTURE . .    65.02           65.6   209    51.7   404     ARMSMC  
     SURFACE . . . . . . . .    74.14           50.8   124    38.8   320     ARMSMC  
     BURIED  . . . . . . . .    65.95           64.0   178    51.1   348     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   262     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   229     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   171     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   123     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   139     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   183     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   130     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   114     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    94     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    89     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    70     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    56     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    47     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    52     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    18     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    28     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    28     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    17     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    24     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     4     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1    5 - 9    5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5      5 - 9        0.72     0.72 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   17 - 27   11   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    11     17 - 27       0.31     0.31 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3   29 - 33   5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5     29 - 33       1.45     1.45 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  4   35 - 42   8    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     8     35 - 42       2.43     2.43 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  5   47 - 51   5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5     47 - 51       0.84     0.84 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  6   56 - 63   8    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     8     56 - 63       0.28     0.28 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  7   69 - 78   10   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     9     70 - 78       4.74     6.63 
  LCS LOCAL_SCORE:             89.00 
 
 FRAGMENT  8   87 - 92   6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6     87 - 92       3.64     3.64 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  9   99 - 108  10   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    10     99 - 108      4.74     4.74 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 10  110 - 115  6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6    110 - 115      2.25     2.25 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 11  119 - 122  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    119 - 122      1.20     1.20 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 12  133 - 150  18   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    18    133 - 150      3.57     3.57 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 13  168 - 171  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    168 - 171      0.58     0.58 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 14  180 - 183  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    180 - 183      0.58     0.58 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 15  204 - 215  12   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    12    204 - 215      0.26     0.26 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 16  239 - 242  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    239 - 242      0.43     0.43 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 17  245 - 253  9    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     9    245 - 253      4.60     4.60 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 18  256 - 266  11   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    11    256 - 266      4.36     4.36 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 19  268 - 272  5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    268 - 272      3.05     3.05 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 20  274 - 277  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    274 - 277      2.20     2.20 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 21  280 - 293  14   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    14    280 - 293      3.29     3.29 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 22  300 - 305  6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6    300 - 305      0.90     0.90 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 23  324 - 328  5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    324 - 328      1.52     1.52 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1    5 - 9    5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5      5 - 9        0.72     0.72 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   17 - 27   11   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    11     17 - 27       0.31     0.31 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3   29 - 33   5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5     29 - 33       1.45     1.45 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  4   35 - 42   8    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6     35 - 40       1.84     3.08 
  LCS LOCAL_SCORE:             68.75 
 
 FRAGMENT  5   47 - 51   5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5     47 - 51       0.84     0.84 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  6   56 - 63   8    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     8     56 - 63       0.28     0.28 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  7   69 - 78   10   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7     72 - 78       1.85     8.09 
  LCS LOCAL_SCORE:             61.00 
 
 FRAGMENT  8   87 - 92   6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3     87 - 89       0.48     6.46 
  LONGEST_CONTINUOUS_SEGMENT     3     88 - 90       0.96     6.50 
  LONGEST_CONTINUOUS_SEGMENT     3     89 - 91       0.69     6.17 
  LONGEST_CONTINUOUS_SEGMENT     3     90 - 92       0.62     6.26 
  LCS LOCAL_SCORE:             50.00 
 
 FRAGMENT  9   99 - 108  10   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    103 - 106      1.12     6.89 
  LCS LOCAL_SCORE:             34.00 
 
 FRAGMENT 10  110 - 115  6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    110 - 114      1.50     2.92 
  LCS LOCAL_SCORE:             77.78 
 
 FRAGMENT 11  119 - 122  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    119 - 122      1.20     1.20 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 12  133 - 150  18   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    16    133 - 148      1.68     3.94 
  LCS LOCAL_SCORE:             83.95 
 
 FRAGMENT 13  168 - 171  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    168 - 171      0.58     0.58 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 14  180 - 183  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    180 - 183      0.58     0.58 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 15  204 - 215  12   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    12    204 - 215      0.26     0.26 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 16  239 - 242  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    239 - 242      0.43     0.43 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 17  245 - 253  9    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    245 - 249      1.71     9.71 
  LONGEST_CONTINUOUS_SEGMENT     5    249 - 253      0.57     8.67 
  LCS LOCAL_SCORE:             55.56 
 
 FRAGMENT 18  256 - 266  11   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6    256 - 261      1.94    10.51 
  LCS LOCAL_SCORE:             45.45 
 
 FRAGMENT 19  268 - 272  5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    268 - 270      0.94     6.58 
  LONGEST_CONTINUOUS_SEGMENT     3    269 - 271      0.20     4.46 
  LONGEST_CONTINUOUS_SEGMENT     3    270 - 272      0.56     5.70 
  LCS LOCAL_SCORE:             60.00 
 
 FRAGMENT 20  274 - 277  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    274 - 276      0.69     3.86 
  LCS LOCAL_SCORE:             75.00 
 
 FRAGMENT 21  280 - 293  14   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    13    281 - 293      1.99     3.59 
  LCS LOCAL_SCORE:             87.76 
 
 FRAGMENT 22  300 - 305  6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6    300 - 305      0.90     0.90 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 23  324 - 328  5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    324 - 328      1.52     1.52 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1    5 - 9    5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5      5 - 9        0.72     0.72 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   17 - 27   11   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    11     17 - 27       0.31     0.31 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3   29 - 33   5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4     30 - 33       0.93     2.17 
  LCS LOCAL_SCORE:             76.00 
 
 FRAGMENT  4   35 - 42   8    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4     35 - 38       0.35     6.02 
  LONGEST_CONTINUOUS_SEGMENT     4     37 - 40       0.17     4.86 
  LONGEST_CONTINUOUS_SEGMENT     4     39 - 42       0.61     5.58 
  LCS LOCAL_SCORE:             50.00 
 
 FRAGMENT  5   47 - 51   5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5     47 - 51       0.84     0.84 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  6   56 - 63   8    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     8     56 - 63       0.28     0.28 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  7   69 - 78   10   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4     70 - 73       0.91    14.97 
  LONGEST_CONTINUOUS_SEGMENT     4     72 - 75       0.75     8.04 
  LONGEST_CONTINUOUS_SEGMENT     4     75 - 78       0.39    14.63 
  LCS LOCAL_SCORE:             39.00 
 
 FRAGMENT  8   87 - 92   6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3     87 - 89       0.48     6.46 
  LONGEST_CONTINUOUS_SEGMENT     3     88 - 90       0.96     6.50 
  LONGEST_CONTINUOUS_SEGMENT     3     89 - 91       0.69     6.17 
  LONGEST_CONTINUOUS_SEGMENT     3     90 - 92       0.62     6.26 
  LCS LOCAL_SCORE:             50.00 
 
 FRAGMENT  9   99 - 108  10   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3     99 - 101      0.37    11.63 
  LONGEST_CONTINUOUS_SEGMENT     3    101 - 103      0.53     8.63 
  LONGEST_CONTINUOUS_SEGMENT     3    102 - 104      0.64     8.03 
  LONGEST_CONTINUOUS_SEGMENT     3    103 - 105      0.23     7.83 
  LONGEST_CONTINUOUS_SEGMENT     3    104 - 106      0.90     7.91 
  LONGEST_CONTINUOUS_SEGMENT     3    105 - 107      0.36    13.81 
  LONGEST_CONTINUOUS_SEGMENT     3    106 - 108      0.76     9.44 
  LCS LOCAL_SCORE:             30.00 
 
 FRAGMENT 10  110 - 115  6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    110 - 113      0.21     3.39 
  LCS LOCAL_SCORE:             61.11 
 
 FRAGMENT 11  119 - 122  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    119 - 121      0.40     2.06 
  LONGEST_CONTINUOUS_SEGMENT     3    120 - 122      0.34     2.21 
  LCS LOCAL_SCORE:             75.00 
 
 FRAGMENT 12  133 - 150  18   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    11    138 - 148      0.83     4.07 
  LCS LOCAL_SCORE:             50.00 
 
 FRAGMENT 13  168 - 171  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    168 - 171      0.58     0.58 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 14  180 - 183  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    180 - 183      0.58     0.58 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 15  204 - 215  12   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    12    204 - 215      0.26     0.26 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 16  239 - 242  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    239 - 242      0.43     0.43 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 17  245 - 253  9    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    249 - 253      0.57     8.67 
  LCS LOCAL_SCORE:             45.68 
 
 FRAGMENT 18  256 - 266  11   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    256 - 259      0.86    12.76 
  LONGEST_CONTINUOUS_SEGMENT     4    257 - 260      0.64    11.02 
  LCS LOCAL_SCORE:             31.40 
 
 FRAGMENT 19  268 - 272  5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    268 - 270      0.94     6.58 
  LONGEST_CONTINUOUS_SEGMENT     3    269 - 271      0.20     4.46 
  LCS LOCAL_SCORE:             60.00 
 
 FRAGMENT 20  274 - 277  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    274 - 276      0.69     3.86 
  LCS LOCAL_SCORE:             75.00 
 
 FRAGMENT 21  280 - 293  14   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    12    282 - 293      0.90     4.08 
  LCS LOCAL_SCORE:             76.53 
 
 FRAGMENT 22  300 - 305  6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6    300 - 305      0.90     0.90 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT 23  324 - 328  5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    324 - 327      0.54     2.55 
  LCS LOCAL_SCORE:             76.00 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS       5       M     5    5    5       C        0   1   1   2   2   2   2   3   3   3   3   4   4   4   4   4   4   4   6   7  
 LCS       6       I     5    5    5       E        0   1   1   1   1   2   2   3   3   3   3   4   4   4   4   5   5   6   7   7  
 LCS       7       A     5    5    5       E        0   1   1   2   2   2   2   3   3   3   3   4   4   4   4   5   5   5   7   7  
 LCS       8       L     5    5    5       E        0   1   1   2   2   2   2   3   3   3   3   4   4   4   4   5   5   6   7   7  
 LCS       9       D     5    5    5       E        0   1   1   2   2   2   2   3   3   3   3   4   4   4   4   5   5   6   7   7  
 LCS      10       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      11       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      12       Q     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      13       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      14       E     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      15       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      16       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      17       G    11   11   11       H        3   3   3   3   3   3   3   3   3   3   3   4   4   4   4   4   4   4   6   6  
 LCS      18       Q    11   11   11       H        3   3   3   3   3   3   3   3   3   3   3   4   4   4   4   5   5   5   6   6  
 LCS      19       I    11   11   11       H        3   3   3   3   3   3   3   3   3   3   3   4   4   4   4   5   5   5   6   6  
 LCS      20       L    11   11   11       H        3   3   3   3   3   3   3   3   3   3   3   4   4   4   4   5   5   5   6   6  
 LCS      21       R    11   11   11       H        3   3   3   3   3   3   3   3   3   3   3   4   4   4   4   5   5   5   6   6  
 LCS      22       S    11   11   11       H        3   3   3   3   3   3   3   3   3   3   3   4   4   4   4   5   5   5   6   6  
 LCS      23       A    11   11   11       H        3   3   3   3   3   3   3   3   3   3   3   4   4   4   4   5   5   5   6   6  
 LCS      24       L    11   11   11       H        3   3   3   3   3   3   3   3   3   3   3   4   4   4   4   5   5   5   6   6  
 LCS      25       S    11   11   11       H        3   3   3   3   3   3   3   3   3   3   3   4   4   4   4   5   5   5   6   6  
 LCS      26       L    11   11   11       H        3   3   3   3   3   3   3   3   3   3   3   3   4   4   4   5   5   5   6   6  
 LCS      27       S    11   11   11       H        3   3   3   3   3   3   3   3   3   3   3   3   3   3   4   5   5   5   6   6  
 LCS      28       M     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      29       I     3    5    5       H        0   0   1   1   1   1   2   2   2   3   3   3   4   4   4   5   5   5   6   6  
 LCS      30       T     4    5    5       H        0   0   1   1   1   1   2   2   2   3   3   3   4   4   4   5   5   5   6   7  
 LCS      31       G     4    5    5       C        0   0   1   1   1   1   2   2   2   3   3   3   4   4   4   5   5   5   6   6  
 LCS      32       Q     4    5    5       C        0   0   1   1   1   1   2   2   2   2   3   3   4   4   4   5   5   5   6   6  
 LCS      33       P     4    5    5       C        0   0   1   1   1   1   2   2   2   2   2   3   3   3   3   4   5   5   6   6  
 LCS      34       F     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      35       T     4    6    8       E        1   1   1   1   1   2   2   2   2   2   2   2   3   3   4   4   5   5   7   7  
 LCS      36       I     4    6    8       E        1   1   1   1   1   2   2   2   2   2   2   3   3   3   4   4   5   5   5   6  
 LCS      37       T     4    6    8       E        1   1   1   1   1   2   2   2   2   2   2   3   3   3   4   4   5   5   5   5  
 LCS      38       S     4    6    8       C        1   1   1   1   1   2   2   2   2   2   2   3   3   3   4   4   5   5   5   5  
 LCS      39       I     4    6    8       C        1   1   1   1   1   2   2   2   2   2   2   3   3   3   4   4   6   6   8   8  
 LCS      40       R     4    6    8       C        1   1   1   1   1   2   2   2   2   2   3   4   4   5   5   5   6   8  10  13  
 LCS      41       A     4    4    8       C        0   1   1   1   1   2   2   2   2   2   3   4   4   5   5   5   6   6   8   8  
 LCS      42       G     4    4    8       C        0   1   1   1   1   2   2   2   2   2   3   4   4   5   5   5   6   6   8   8  
 LCS      43       R     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      44       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      45       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      46       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      47       G     5    5    5       C        1   1   1   1   1   1   1   1   2   2   3   4   4   5   5   5   7  10  11  13  
 LCS      48       L     5    5    5       C        1   1   1   1   1   1   1   2   4   5   6   6   7   7   8   9  11  11  13  14  
 LCS      49       L     5    5    5       C        1   1   1   1   1   1   3   3   4   5   6   6   7   7   8   9  11  11  13  14  
 LCS      50       R     5    5    5       H        1   1   1   1   1   2   3   3   4   5   6   6   7   7   8   9  11  11  13  14  
 LCS      51       Q     5    5    5       H        0   1   1   1   2   2   2   3   3   4   5   6   6   7   8   9  11  11  13  14  
 LCS      52       H     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      53       L     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      54       T     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      55       A     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      56       V     8    8    8       H        2   2   2   2   2   2   2   2   2   3   4   5   6   7   8   9  11  11  13  14  
 LCS      57       K     8    8    8       H        2   2   2   2   2   2   3   3   5   5   6   6   7   7   8   9  11  11  13  14  
 LCS      58       A     8    8    8       H        2   2   2   2   2   2   3   3   5   5   6   6   7   7   8   9  11  11  13  14  
 LCS      59       A     8    8    8       H        2   2   2   2   2   2   2   3   5   5   6   6   7   7   8   9  11  11  13  14  
 LCS      60       T     8    8    8       H        2   2   2   2   2   2   3   3   5   5   6   6   7   7   8   9  11  11  13  14  
 LCS      61       E     8    8    8       H        2   2   2   2   2   2   3   3   5   5   6   6   7   7   8   9  11  11  13  14  
 LCS      62       I     8    8    8       H        2   2   2   2   2   2   3   3   5   5   6   6   7   7   8   9  11  11  13  14  
 LCS      63       C     8    8    8       H        2   2   2   2   2   2   3   3   5   5   6   6   7   7   8   9  11  11  13  14  
 LCS      64       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      65       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      66       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      67       V     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      68       E     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      69       G     3    4    8       C        0   0   0   0   1   1   1   1   1   2   2   3   3   3   4   6   7   8   9   9  
 LCS      70       A     4    4    9       C        0   1   1   1   1   1   1   2   2   2   2   3   4   4   4   4   7   8   9   9  
 LCS      71       E     4    4    9       C        0   1   1   1   1   1   1   2   2   2   2   3   4   4   4   4   5   5   5   6  
 LCS      72       L     4    7    9       C        0   1   1   1   1   2   2   2   2   2   2   3   4   4   4   4   5   5   5   6  
 LCS      73       G     4    7    9       C        0   1   1   1   1   2   2   2   2   2   2   3   4   4   4   4   5   5   5   6  
 LCS      74       S     4    7    9       C        0   1   1   1   1   2   2   2   2   2   2   3   4   4   4   4   5   5   5   6  
 LCS      75       Q     4    7    9       C        0   1   1   1   1   2   2   2   2   2   2   3   4   4   4   4   5   5   5   6  
 LCS      76       R     4    7    9       C        0   1   1   1   1   2   2   2   2   2   2   3   4   4   4   4   5   5   5   6  
 LCS      77       L     4    7    9       E        0   1   1   1   1   2   2   2   2   2   2   2   3   3   4   4   5   5   5   6  
 LCS      78       L     4    7    9       E        0   1   1   1   1   2   2   2   2   2   2   2   2   3   4   4   5   5   5   6  
 LCS      79       F     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      80       R     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      81       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      82       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      83       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      84       V     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      85       R     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      86       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      87       G     3    3    6       C        0   0   0   0   0   0   1   1   5   5   6   6   6   6   7   7   7   8   8   8  
 LCS      88       D     3    3    6       E        0   0   0   0   0   0   1   1   1   1   1   5   6   6   7   7   7   8   8   8  
 LCS      89       Y     3    3    6       E        0   0   0   0   0   1   1   1   1   2   2   2   2   2   2   5   6   6   8   8  
 LCS      90       R     3    3    6       E        0   0   0   0   1   1   1   1   1   2   2   2   4   5   5   5   6   6   8   8  
 LCS      91       F     3    3    6       E        0   0   0   0   1   1   1   1   2   2   3   4   4   5   5   5   6   6   8   8  
 LCS      92       A     3    3    6       E        0   0   0   0   1   1   1   1   2   2   3   4   4   5   5   5   6   6   8   8  
 LCS      93       I     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      94       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      95       S     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      96       A     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      97       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      98       S     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      99       C     3    3   10       H        0   0   0   0   1   1   1   1   2   4   5   5   6   6   7   9  10  11  12  14  
 LCS     100       T     3    3   10       H        0   0   0   1   1   1   1   1   2   4   5   5   6   6   7   7   8  10  11  13  
 LCS     101       L     3    3   10       H        0   0   0   1   1   1   1   1   2   4   5   5   6   6   7   9  11  11  13  14  
 LCS     102       V     3    3   10       H        0   0   0   1   1   1   1   1   2   3   3   4   6   6   7   7   9  10  12  14  
 LCS     103       L     3    4   10       H        0   0   1   1   2   2   2   3   5   5   6   6   6   7   8   9  11  11  13  14  
 LCS     104       Q     3    4   10       H        0   0   1   1   2   3   5   5   5   5   6   6   6   6   8   8  10  11  13  14  
 LCS     105       T     3    4   10       H        0   0   1   1   2   2   2   3   3   4   5   5   6   6   7   8   9  11  12  14  
 LCS     106       V     3    4   10       H        0   0   1   1   2   2   2   3   3   4   4   5   6   6   8   9  11  11  13  14  
 LCS     107       L     3    3   10       H        0   0   0   0   1   2   2   2   3   3   4   5   6   7   8   8  11  11  13  14  
 LCS     108       P     3    3   10       H        0   0   0   1   2   2   3   3   5   5   6   6   7   7   8   9  11  11  13  14  
 LCS     109       A     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     110       L     4    5    6       H        1   1   1   1   2   2   2   2   3   3   4   5   5   6   7   7   7   7  10  12  
 LCS     111       W     4    5    6       C        1   1   1   1   2   2   2   2   2   3   3   5   5   6   7   7   7   9  10  11  
 LCS     112       F     4    5    6       C        1   1   1   1   2   2   2   2   2   3   3   4   5   5   6   7   7   7   7   9  
 LCS     113       A     4    5    6       C        1   1   1   1   2   2   2   2   3   3   4   4   5   5   6   7   7   7   8   8  
 LCS     114       D     3    5    6       C        0   0   0   0   2   2   2   2   3   3   4   4   5   5   7   7   7   7   8   8  
 LCS     115       G     3    3    6       C        0   0   0   0   1   1   2   2   3   3   4   4   5   6   7   7   7   7   8   8  
 LCS     116       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     117       S     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     118       R     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     119       V     3    4    4       E        0   0   1   1   1   1   2   2   3   4   4   5   5   6   7   7   7   8   8   8  
 LCS     120       E     3    4    4       E        0   0   1   1   1   1   2   2   3   4   4   5   5   6   7   7   7   8   8   8  
 LCS     121       V     3    4    4       E        0   0   1   1   1   1   2   2   3   4   4   5   5   6   7   7   7   8   8   8  
 LCS     122       S     3    4    4       E        0   0   1   1   1   1   1   2   3   3   3   3   4   6   7   7   7   8   8   8  
 LCS     123       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     124       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     125       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     126       D     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     127       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     128       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     129       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     130       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     131       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     132       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     133       A     7   16   18       C        0   1   2   3   4   4   5   5   5   5   6   6   7   7   8   8   9  10  11  13  
 LCS     134       D     7   16   18       H        1   1   3   3   4   4   5   5   5   5   6   6   7   7   8   8   9  10  13  14  
 LCS     135       F     7   16   18       H        1   1   2   3   4   4   5   5   5   5   6   6   7   7   8   8  10  11  13  14  
 LCS     136       I     7   16   18       H        1   1   2   2   4   4   5   5   5   5   6   6   7   7   8   9  11  11  13  14  
 LCS     137       R     7   16   18       H        1   1   2   3   4   4   5   5   5   5   6   6   7   7   8   9  11  11  13  14  
 LCS     138       R    11   16   18       H        1   2   3   3   4   4   5   5   5   5   6   6   6   7   8   9  11  11  13  14  
 LCS     139       V    11   16   18       C        1   2   3   3   4   4   5   5   5   5   6   6   6   6   7   7   9  11  12  14  
 LCS     140       L    11   16   18       H        1   2   3   3   4   4   5   5   5   5   6   6   6   7   8   9  11  11  13  14  
 LCS     141       E    11   16   18       H        1   2   3   3   4   4   5   5   5   5   6   6   6   7   8   9  11  11  13  14  
 LCS     142       P    11   16   18       H        1   2   3   3   4   4   5   5   5   5   6   6   6   6   7   7   7   8   8  13  
 LCS     143       L    11   16   18       H        1   2   3   3   4   4   5   5   5   5   6   6   6   6   7   7   7   8   8   8  
 LCS     144       L    11   16   18       H        1   2   3   3   4   4   5   5   5   5   6   6   6   6   7   7   7   8   8   8  
 LCS     145       A    11   16   18       H        1   2   3   3   4   4   5   5   5   5   6   6   6   6   7   7   7   8   8   8  
 LCS     146       K    11   16   18       H        1   2   3   3   4   4   5   5   5   5   6   6   6   6   7   7   7   8   8   8  
 LCS     147       I    11   16   18       H        1   2   3   3   4   4   5   5   5   5   6   6   6   6   7   7   7   8   8   8  
 LCS     148       G    11   16   18       C        1   2   3   3   4   4   5   5   5   5   6   6   6   6   7   7   7   8   8   8  
 LCS     149       I     3   12   18       C        0   0   0   1   1   1   2   3   5   5   6   6   6   6   7   7   7   8   8   8  
 LCS     150       H     3    4   18       C        0   0   0   1   1   1   1   1   1   2   3   3   3   5   7   7   7   8   8   8  
 LCS     151       Q     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     152       Q     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     153       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     154       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     155       L     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     156       L     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     157       R     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     158       H     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     159       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     160       F     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     161       Y     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     162       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     163       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     164       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     165       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     166       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     167       V     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     168       V     4    4    4       E        0   1   1   1   2   2   2   3   3   4   5   6   6   7   8   9  11  11  13  14  
 LCS     169       A     4    4    4       E        0   1   1   1   2   2   2   3   3   4   5   6   6   7   8   9  11  11  13  14  
 LCS     170       T     4    4    4       E        0   1   1   1   2   2   2   3   3   4   6   6   6   7   8   9  11  11  13  14  
 LCS     171       E     4    4    4       E        0   1   1   1   1   1   3   3   5   5   6   6   6   6   7   7   9  10  11  13  
 LCS     172       V     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     173       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     174       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     175       V     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     176       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     177       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     178       F     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     179       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     180       T     4    4    4       C        0   1   1   1   1   1   1   1   1   1   1   1   1   1   1   2   3   3   3   3  
 LCS     181       L     4    4    4       E        0   1   1   1   1   1   1   1   1   1   4   5   6   6   7   7   7   8   9   9  
 LCS     182       Q     4    4    4       E        0   1   1   1   1   1   1   1   2   4   5   5   6   6   7   7   7   8   9   9  
 LCS     183       L     4    4    4       C        0   1   1   1   1   2   2   2   3   4   5   5   6   6   7   7   7   8   9   9  
 LCS     184       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     185       E     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     186       R     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     187       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     188       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     189       I     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     190       V     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     191       Q     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     192       M     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     193       R     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     194       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     195       E     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     196       V     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     197       L     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     198       L     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     199       A     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     200       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     201       V     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     202       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     203       R     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     204       H    12   12   12       H        3   3   3   3   3   3   3   3   3   4   4   5   5   6   7   7   8   9  10  11  
 LCS     205       V    12   12   12       H        3   3   3   3   3   3   3   3   3   4   4   5   6   7   8   8   8   9  10  11  
 LCS     206       A    12   12   12       H        3   3   3   3   3   3   3   3   5   5   6   6   7   7   8   8   9  10  11  14  
 LCS     207       E    12   12   12       H        3   3   3   3   3   3   3   3   5   5   6   6   7   7   8   8   9  11  13  14  
 LCS     208       R    12   12   12       H        3   3   3   3   3   3   3   3   5   5   6   6   7   7   8   9  10  11  13  14  
 LCS     209       E    12   12   12       H        3   3   3   3   3   3   3   3   4   4   4   6   6   7   8   9  11  11  13  14  
 LCS     210       I    12   12   12       H        3   3   3   3   3   3   3   3   3   4   4   5   6   7   8   9  11  11  13  14  
 LCS     211       A    12   12   12       H        3   3   3   3   3   3   3   3   3   4   4   5   5   7   8   9  11  11  13  14  
 LCS     212       T    12   12   12       H        3   3   3   3   3   3   3   3   3   4   4   5   5   7   8   9  11  11  13  14  
 LCS     213       L    12   12   12       H        3   3   3   3   3   3   3   3   3   4   4   5   5   6   7   9  10  11  12  13  
 LCS     214       A    12   12   12       H        3   3   3   3   3   3   3   3   3   4   4   5   5   5   6   6   7   8  11  12  
 LCS     215       G    12   12   12       H        3   3   3   3   3   3   3   3   3   4   4   5   5   5   5   6   7   8  10  12  
 LCS     216       S     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     217       F     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     218       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     219       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     220       H     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     221       E     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     222       Q     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     223       N     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     224       I     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     225       H     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     226       N     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     227       L     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     228       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     229       R     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     230       D     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     231       Q     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     232       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     233       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     234       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     235       N     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     236       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     237       V     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     238       S     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     239       L     4    4    4       E        0   1   1   1   1   2   2   2   3   4   5   6   6   7   8   9  11  11  13  14  
 LCS     240       E     4    4    4       E        0   1   1   1   1   2   2   2   3   4   4   6   6   7   8   9  11  11  13  14  
 LCS     241       V     4    4    4       E        0   1   1   1   1   2   2   2   3   4   5   6   6   7   8   9  11  11  13  14  
 LCS     242       E     4    4    4       E        0   1   1   1   1   1   2   2   3   4   4   5   5   7   8   9  11  11  13  14  
 LCS     243       S     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     244       E     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     245       N     3    5    9       C        0   0   1   1   1   1   1   2   2   3   4   5   5   5   5   5   5   6   6   7  
 LCS     246       I     3    5    9       C        0   0   1   1   1   1   1   2   2   3   4   5   5   5   5   5   5   6   6   7  
 LCS     247       T     3    5    9       E        0   0   1   1   1   1   1   2   2   3   4   5   5   5   5   5   5   9  10  11  
 LCS     248       E     3    5    9       E        0   0   1   1   1   1   1   1   4   5   5   5   6   7   8   8   9  11  13  14  
 LCS     249       R     5    5    9       E        1   1   1   1   2   2   3   3   5   5   6   6   7   7   8   9  11  11  13  14  
 LCS     250       F     5    5    9       E        1   1   1   1   2   2   3   3   5   5   6   6   7   7   8   9  11  11  13  14  
 LCS     251       F     5    5    9       E        1   1   1   1   2   2   3   3   5   5   6   6   7   7   8   9  11  11  13  14  
 LCS     252       V     5    5    9       E        1   1   1   1   2   2   3   3   5   5   6   6   7   7   8   9  11  11  13  14  
 LCS     253       V     5    5    9       E        0   1   1   1   1   1   1   1   2   2   4   6   7   7   8   9  10  11  13  14  
 LCS     254       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     255       E     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     256       K     4    6   11       C        0   0   1   1   1   1   1   2   2   2   2   3   3   3   3   4   5   5   6   9  
 LCS     257       R     4    6   11       C        0   1   1   1   1   1   1   2   2   2   2   3   6   7   7   8   9  11  12  14  
 LCS     258       V     4    6   11       C        0   1   1   1   1   1   1   2   2   2   2   2   2   3   3   4   5   5  11  14  
 LCS     259       S     4    6   11       C        0   1   1   1   1   1   1   2   2   2   2   2   2   3   3   4   4   5   6  12  
 LCS     260       A     4    6   11       H        0   1   1   1   1   1   1   2   2   2   2   2   2   3   3   3   3   4   5   5  
 LCS     261       E     3    6   11       H        0   0   0   1   1   1   1   2   2   2   2   2   2   3   3   3   3   4   4   5  
 LCS     262       V     3    4   11       H        0   0   0   1   1   1   1   2   2   2   2   2   2   3   3   3   4   5   6   7  
 LCS     263       V     3    4   11       H        0   0   0   1   1   1   1   1   2   2   2   2   2   3   3   3   4   4   4   5  
 LCS     264       A     3    4   11       H        0   0   0   1   1   1   1   1   2   2   2   2   2   3   3   3   4   4   4   5  
 LCS     265       A     3    4   11       H        0   0   0   1   1   1   1   1   2   2   2   2   2   3   3   4   5   6   7   7  
 LCS     266       Q     3    3   11       H        0   0   0   0   0   1   1   1   3   4   4   4   4   4   5   5   7   8   8   8  
 LCS     267       L     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     268       V     3    3    5       H        0   0   0   0   1   1   1   3   3   4   4   4   4   5   5   6   7   8   8   9  
 LCS     269       K     3    3    5       H        0   0   0   0   1   1   2   3   3   4   4   4   4   5   5   6   7   8   8   8  
 LCS     270       E     3    3    5       H        0   0   0   0   1   1   1   1   2   2   2   2   2   2   3   3   4   8   8   8  
 LCS     271       V     3    3    5       H        0   0   0   0   1   1   1   1   2   2   2   2   2   2   3   3   4   4   4   5  
 LCS     272       K     3    3    5       H        0   0   0   0   0   1   1   1   1   2   2   2   2   2   3   3   4   4   5   5  
 LCS     273       R     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     274       Y     3    3    4       H        0   0   0   0   1   1   1   1   2   2   2   2   2   2   3   3   3   3   4   4  
 LCS     275       L     3    3    4       C        0   0   0   0   1   1   1   1   1   1   2   2   2   2   4   5   5   7   7   8  
 LCS     276       A     3    3    4       C        0   0   0   0   0   1   1   1   2   3   3   4   5   6   6   7   7   8   9   9  
 LCS     277       S     3    3    4       C        0   0   0   0   2   2   2   3   3   3   4   5   6   6   6   7   7   8   9   9  
 LCS     278       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     279       A     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     280       A     3    3   14       C        0   0   0   0   0   1   1   1   1   2   2   2   3   3   6   6   7   8   8   8  
 LCS     281       V     3   13   14       E        0   0   0   1   1   2   3   3   3   3   3   5   5   5   6   6   7   8   8   8  
 LCS     282       G    12   13   14       C        2   2   3   3   3   3   3   3   3   3   4   5   5   5   6   6   7   8   8   8  
 LCS     283       E    12   13   14       H        2   2   3   3   3   3   3   3   3   3   3   3   3   3   4   4   5   8   8   8  
 LCS     284       Y    12   13   14       H        2   2   3   3   3   3   3   3   3   3   3   3   3   3   4   6   7   8   8   8  
 LCS     285       L    12   13   14       H        2   2   3   3   3   3   3   3   3   3   4   5   5   5   6   6   7   8   8   8  
 LCS     286       A    12   13   14       H        2   2   3   3   3   3   3   3   3   3   4   5   5   5   6   6   7   8   8   8  
 LCS     287       D    12   13   14       H        2   2   3   3   3   3   3   3   3   3   3   5   5   5   6   6   7   8   8   8  
 LCS     288       Q    12   13   14       H        2   2   3   3   3   3   3   3   3   3   3   5   5   5   6   6   7   8   8   8  
 LCS     289       L    12   13   14       H        2   2   3   3   3   3   3   3   3   3   3   3   5   5   6   6   6   8   8   8  
 LCS     290       V    12   13   14       H        1   2   3   3   3   3   3   3   3   3   4   5   5   5   6   6   7   8   8   8  
 LCS     291       L    12   13   14       H        1   2   3   3   3   3   3   3   3   3   4   5   5   5   6   6   7   8   8   8  
 LCS     292       P    12   13   14       H        1   2   3   3   3   3   3   3   3   3   3   3   3   3   4   4   5   5   7   8  
 LCS     293       M    12   13   14       H        1   2   3   3   3   3   3   3   3   3   3   3   3   3   4   4   5   5   5   5  
 LCS     294       A     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     295       L     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     296       A     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     297       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     298       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     299       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     300       E     6    6    6       E        1   1   1   1   1   1   1   1   1   1   1   2   2   3   3   4   5   5   5   6  
 LCS     301       F     6    6    6       E        1   1   1   1   1   1   1   1   1   1   1   2   2   3   4   4   5   5   5   6  
 LCS     302       T     6    6    6       E        1   1   1   1   1   1   1   1   1   1   1   2   2   3   4   4   5   5   5   6  
 LCS     303       V     6    6    6       E        1   1   1   1   1   1   1   1   1   1   1   2   2   3   3   4   4   5   5   6  
 LCS     304       A     6    6    6       C        1   1   1   1   1   1   2   2   2   2   3   3   4   5   5   7   7   8   9   9  
 LCS     305       H     6    6    6       C        0   0   1   1   2   2   2   3   3   3   3   5   6   6   6   7   7   8   9   9  
 LCS     306       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     307       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     308       C     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     309       H     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     310       L     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     311       L     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     312       T     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     313       N     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     314       I     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     315       A     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     316       V     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     317       V     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     318       E     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     319       R     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     320       F     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     321       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     322       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     323       V     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     324       R     4    5    5       C        0   1   1   1   1   1   1   1   1   1   1   1   1   2   2   3   3   3   3   6  
 LCS     325       F     4    5    5       E        0   1   1   1   1   1   1   1   1   1   1   2   2   3   3   3   4   4   5   6  
 LCS     326       S     4    5    5       E        0   1   1   1   1   1   1   1   1   1   1   1   1   3   3   3   4   4   5   6  
 LCS     327       L     4    5    5       E        0   1   1   1   1   1   1   1   1   1   1   1   2   2   2   3   3   3   5   6  
 LCS     328       I     3    5    5       E        0   0   0   1   1   1   1   1   1   1   1   1   2   2   2   3   3   3   5   5  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   0.95 
 
 NUMBER_OF_CA_Tg:  335      NUMBER_OF_CA_Pr:  174      PERCENT_OF_CA:  51.94  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max      12      12      12      13      15      16      17      17      19      19      21      23      24      26      29      32      37      40      44      49  
 GDT PERCENT_OF_CA_Pr    6.90    6.90    6.90    7.47    8.62    9.20    9.77    9.77   10.92   10.92   12.07   13.22   13.79   14.94   16.67   18.39   21.26   22.99   25.29   28.16 
 GDT PERCENT_OF_CA_Tg    3.58    3.58    3.58    3.88    4.48    4.78    5.07    5.07    5.67    5.67    6.27    6.87    7.16    7.76    8.66    9.55   11.04   11.94   13.13   14.63 
 GDT FRAGMENT: Beg-End 204-215 204-215 204-215 133-148 133-148 133-148 104-148 104-148 103-149 103-171 103-171  48-252  48-253  48-253  48-252  48-252  48-252  48-252  48-253  48-253 
 GDT RMS_LOCAL           0.26    0.26    0.26    1.34    1.57    1.68    1.86    1.86    2.84    2.67    3.35    4.44    4.53    4.82    5.53    5.97    6.52    6.76    7.11    7.46 
 GDT RMS_ALL_CA         46.83   46.83   46.83   33.06   33.37   33.65   33.51   33.51   33.33   33.75   33.48   27.29   27.57   27.37   26.41   26.34   25.63   25.58   25.89   25.81 
 
 
 TEST (CA)  RMS =  20.73               (Number of atoms:  174) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   20.73        174    51.9   335     CRMSCA  
     CRN = ALL/NP  . . . . .    0.1191                            CRMSCA  
     SECONDARY STRUCTURE . .   21.17        119    58.9   202     CRMSCA  
     SURFACE . . . . . . . .   19.71         72    44.7   161     CRMSCA  
     BURIED  . . . . . . . .   21.42        102    58.6   174     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   20.77        696    42.5  1639     CRMSMC  
     SECONDARY STRUCTURE . .   21.21        476    47.6  1000     CRMSMC  
     SURFACE . . . . . . . .   19.56        288    36.6   787     CRMSMC  
     BURIED  . . . . . . . .   21.58        408    47.9   852     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    0.00          0     0.0  1152     CRMSSC  
     RELIABLE SIDE CHAINS  .    0.00          0     0.0   936     CRMSSC  
     SECONDARY STRUCTURE . .    0.00          0     0.0   744     CRMSSC  
     SURFACE . . . . . . . .    0.00          0     0.0   570     CRMSSC  
     BURIED  . . . . . . . .    0.00          0     0.0   582     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   20.77        696    27.9  2492     CRMSALL 
     SECONDARY STRUCTURE . .   21.21        476    30.7  1552     CRMSALL 
     SURFACE . . . . . . . .   19.56        288    23.7  1214     CRMSALL 
     BURIED  . . . . . . . .   21.58        408    31.9  1278     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   19.079      1.000       0.500    174    51.9   335     ERRCA  
     SECONDARY STRUCTURE . .   19.220      1.000       0.500    119    58.9   202     ERRCA  
     SURFACE . . . . . . . .   18.290      1.000       0.500     72    44.7   161     ERRCA  
     BURIED  . . . . . . . .   19.636      1.000       0.500    102    58.6   174     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   19.061      1.000       0.500    696    42.5  1639     ERRMC  
     SECONDARY STRUCTURE . .   19.177      1.000       0.500    476    47.6  1000     ERRMC  
     SURFACE . . . . . . . .   18.132      1.000       0.500    288    36.6   787     ERRMC  
     BURIED  . . . . . . . .   19.717      1.000       0.500    408    47.9   852     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.000      0.000       0.000      0     0.0  1152     ERRSC  
     RELIABLE SIDE CHAINS  .    0.000      0.000       0.000      0     0.0   936     ERRSC  
     SECONDARY STRUCTURE . .    0.000      0.000       0.000      0     0.0   744     ERRSC  
     SURFACE . . . . . . . .    0.000      0.000       0.000      0     0.0   570     ERRSC  
     BURIED  . . . . . . . .    0.000      0.000       0.000      0     0.0   582     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   19.061      1.000       0.500    696    27.9  2492     ERRALL 
     SECONDARY STRUCTURE . .   19.177      1.000       0.500    476    30.7  1552     ERRALL 
     SURFACE . . . . . . . .   18.132      1.000       0.500    288    23.7  1214     ERRALL 
     BURIED  . . . . . . . .   19.717      1.000       0.500    408    31.9  1278     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         0         1         5        24     174     335   DISTCA 
CA  (P)      0.00      0.00      0.30      1.49      7.16             335   DISTCA 
CA  (RMS)    0.00      0.00      2.81      3.54      6.94                   DISTCA 
 
ALL (N)         0         2         6        24        95     696    2492   DISTALL 
ALL (P)      0.00      0.08      0.24      0.96      3.81            2492   DISTALL 
ALL (RMS)    0.00      1.62      2.38      3.68      6.86                   DISTALL 
 
 
 
 
END of the results output 
