 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
# WARNING! The number of residues in SS section: 72 , MODEL 72 , TARGET 158 
#          The number of residues possible to evaluate: 72 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP     1     T     C     C             1.00 
 SSP     2     V     E     C             1.00 
 SSP     3     A     E     C             1.00 
 SSP     4     Y     E     C             1.00 
 SSP     5     I     E     C             1.00 
 SSP     6     A     E     C             1.00 
 SSP     7     I     E     C             1.00 
 SSP     8     G     E     C             1.00 
 SSP  BREAK 
 SSP    14     P     H     C             1.00 
 SSP    15     L     H     C             1.00 
 SSP    16     E     H     C             1.00 
 SSP    17     Q     H     C             1.00 
 SSP    18     V     H     C             1.00 
 SSP    19     N     H     C             1.00 
 SSP    20     A     H     C             1.00 
 SSP    21     A     H     C             1.00 
 SSP    22     L     H     H             1.00 
 SSP    23     K     H     H             1.00 
 SSP    24     A     H     H             1.00 
 SSP    25     L     H     H             1.00 
 SSP    26     G     H     H             1.00 
 SSP    27     D     C     C             1.00 
 SSP  BREAK 
 SSP    29     P     C     C             1.00 
 SSP    30     E     C     C             1.00 
 SSP    31     S     E     C             1.00 
 SSP    32     H     E     C             1.00 
 SSP    33     I     E     E             1.00 
 SSP    34     L     E     E             1.00 
 SSP    35     T     E     C             1.00 
 SSP    36     V     E     C             1.00 
 SSP  BREAK 
 SSP    44     P     C     C             1.00 
 SSP    45     L     C     C             1.00 
 SSP    46     G     C     C             1.00 
 SSP    47     P     C     C             1.00 
 SSP    48     Q     C     C             1.00 
 SSP    49     D     C     H             1.00 
 SSP    50     Q     C     H             1.00 
 SSP    51     P     C     H             1.00 
 SSP    52     D     C     H             1.00 
 SSP    53     Y     E     H             1.00 
 SSP    54     L     E     H             1.00 
 SSP    55     N     E     H             1.00 
 SSP    56     A     E     H             1.00 
 SSP    57     A     E     H             1.00 
 SSP    58     V     E     H             1.00 
 SSP    59     A     E     H             1.00 
 SSP    60     L     E     H             1.00 
 SSP    61     E     E     H             1.00 
 SSP    62     T     E     H             1.00 
 SSP    63     S     C     H             1.00 
 SSP    64     L     C     H             1.00 
 SSP    65     A     C     C             1.00 
 SSP    66     P     H     C             1.00 
 SSP    67     E     H     C             1.00 
 SSP    68     E     H     H             1.00 
 SSP    69     L     H     H             1.00 
 SSP    70     L     H     H             1.00 
 SSP    71     N     H     H             1.00 
 SSP    72     H     H     H             1.00 
 SSP    73     T     H     H             1.00 
 SSP    74     Q     H     H             1.00 
 SSP    75     R     H     H             1.00 
 SSP    76     I     H     H             1.00 
 SSP    77     E     H     H             1.00 
 SSP    78     L     H     H             1.00 
 SSP    79     Q     H     C             1.00 
 SSP    80     Q     H     E             1.00 
 SSP    81     G     C     E             1.00 
 SSP    82     R     C     E             1.00 
 SSP    83     V     C     C             1.00 
 SSP    84     R     C     C             1.00 
 SSP    85     K     H     C             1.00 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              41.7      55.2      8.7     60.0     45.6 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        53.1      75.9     13.0     66.1     45.6 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG            6              48.6              18.1 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00      72    100.0     41.7 
 
 BIN  0.00 - 1.00      1.00      72    100.0     41.7 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
# WARNING! The number of residues with CB atom coordinates: MODEL 0 , TARGET 150 
 
# WARNING! TARGET 1266 atoms, MODEL 1005 atoms, 1005 common with TARGET 
           Number of atoms possible to evaluate: 288 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    79.71           47.1   136    43.3   314     ARMSMC  
     SECONDARY STRUCTURE . .    73.69           53.5    99    62.7   158     ARMSMC  
     SURFACE . . . . . . . .    77.28           49.4    77    42.8   180     ARMSMC  
     BURIED  . . . . . . . .    82.78           44.1    59    44.0   134     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   137     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   129     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    68     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    82     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    55     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   114     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    80     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    57     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    69     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    45     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    38     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    31     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    17     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    33     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     5     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    15     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    15     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0     4     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    14     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     1     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1    1 - 8    8    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     8      1 - 8        1.30     1.30 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   14 - 27   14   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    14     14 - 27       4.40     4.40 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3   29 - 36   8    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     8     29 - 36       1.61     1.61 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  4   44 - 85   42   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    31     54 - 84       4.93     7.53 
  LCS LOCAL_SCORE:             65.02 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1    1 - 8    8    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     8      1 - 8        1.30     1.30 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   14 - 27   14   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     8     20 - 27       1.65    10.16 
  LCS LOCAL_SCORE:             44.39 
 
 FRAGMENT  3   29 - 36   8    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     8     29 - 36       1.61     1.61 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  4   44 - 85   42   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    16     67 - 82       1.73     7.98 
  LCS LOCAL_SCORE:             21.37 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1    1 - 8    8    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7      1 - 7        0.79     1.58 
  LCS LOCAL_SCORE:             82.81 
 
 FRAGMENT  2   14 - 27   14   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7     21 - 27       0.75    11.62 
  LCS LOCAL_SCORE:             37.76 
 
 FRAGMENT  3   29 - 36   8    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5     29 - 33       0.76     3.03 
  LONGEST_CONTINUOUS_SEGMENT     5     31 - 35       0.88     2.36 
  LCS LOCAL_SCORE:             59.38 
 
 FRAGMENT  4   44 - 85   42   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    14     67 - 80       0.57     9.25 
  LCS LOCAL_SCORE:             16.38 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS       1       T     7    8    8       C        3   3   4   4   5   5   5   5   6   8  10  10  11  12  13  13  15  17  17  19  
 LCS       2       V     7    8    8       E        3   3   4   4   5   5   5   5   6   8  10  10  11  12  13  13  15  17  18  19  
 LCS       3       A     7    8    8       E        2   3   4   4   5   5   5   5   6   8  10  10  11  12  13  13  15  17  17  19  
 LCS       4       Y     7    8    8       E        3   3   4   4   5   5   5   5   6   8  10  10  11  12  12  12  15  17  17  19  
 LCS       5       I     7    8    8       E        3   3   4   4   6   7   9   9   9   9  10  10  11  12  13  13  15  15  17  17  
 LCS       6       A     7    8    8       E        3   3   4   4   5   5   5   5   6   8  10  10  11  12  13  13  15  15  17  17  
 LCS       7       I     7    8    8       E        1   3   4   4   5   5   5   5   6   8  10  10  11  12  13  13  15  15  17  17  
 LCS       8       G     4    8    8       E        1   1   2   3   5   5   5   5   6   8  10  10  11  12  13  13  15  15  17  17  
 LCS       9       S     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      10       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      11       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      12       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      13       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      14       P     3    3   14       H        1   1   1   1   2   3   4   6   6   7  10  10  11  12  13  13  15  17  17  19  
 LCS      15       L     4    4   14       H        2   2   2   2   2   3   5   6   6   7  15  18  19  21  22  22  24  25  27  27  
 LCS      16       E     4    4   14       H        2   2   2   2   2   3   4   5   6   8  15  18  19  21  22  22  24  25  27  27  
 LCS      17       Q     4    4   14       H        2   2   2   2   2   3   5   6   6   8  10  10  17  21  22  22  24  25  27  27  
 LCS      18       V     4    4   14       H        2   2   2   2   2   3   4   6   6   8  10  10  11  12  13  13  24  25  25  26  
 LCS      19       N     3    4   14       H        1   1   2   5   8  12  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      20       A     3    8   14       H        1   1   2   3   4   5   5   6   6   7  15  16  19  21  22  23  24  27  28  30  
 LCS      21       A     7    8   14       H        2   4   4   5   6   8   9   9   9   9  15  16  19  21  22  23  24  27  28  30  
 LCS      22       L     7    8   14       H        2   4   5   8  10  12  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      23       K     7    8   14       H        2   4   4   5   6   9  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      24       A     7    8   14       H        2   4   4   8  10  12  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      25       L     7    8   14       H        2   4   4   5   6   8  10  10  13  15  17  18  19  21  22  23  24  27  28  30  
 LCS      26       G     7    8   14       H        2   4   4   5   6   8   9   9   9   9  10  10  11  18  19  23  24  27  28  30  
 LCS      27       D     7    8   14       C        2   4   4   5   6   8   9  10  12  13  15  16  18  20  22  23  24  27  28  30  
 LCS      28       I     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      29       P     5    8    8       C        1   3   3   5   6   8   9   9   9   9  10  10  10  11  12  12  13  15  16  17  
 LCS      30       E     5    8    8       C        1   3   3   5   6   8   9   9   9   9  10  10  10  11  12  12  13  13  14  14  
 LCS      31       S     5    8    8       E        1   3   3   5   6   8   9   9   9   9  10  10  10  11  12  12  13  13  14  14  
 LCS      32       H     5    8    8       E        1   3   3   4   6   6   9   9   9   9  10  10  10  11  12  12  13  13  14  14  
 LCS      33       I     5    8    8       E        1   3   3   4   6   8   9   9   9   9  10  10  10  11  12  12  13  13  14  14  
 LCS      34       L     5    8    8       E        1   2   3   5   6   8   9   9   9   9  10  10  10  11  12  12  13  13  14  14  
 LCS      35       T     5    8    8       E        1   2   3   4   6   8   9   9   9   9  10  10  10  11  12  12  13  13  14  14  
 LCS      36       V     3    8    8       E        1   1   1   3   5   5   5   5   6   6   7   8   9  11  12  12  13  15  17  17  
 LCS      37       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      38       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      39       F     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      40       Y     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      41       R     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      42       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      43       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      44       P     3    4   14       C        0   1   2   2   2   2   3   4   5   6   8   9  11  16  18  20  24  27  28  30  
 LCS      45       L     3    6   14       C        0   1   2   3   3   4   5   6   6   8   8  10  14  16  18  22  24  27  28  30  
 LCS      46       G     4    6   14       C        1   1   2   3   3   4   5   6   6   8   8  10  14  16  18  20  24  27  28  30  
 LCS      47       P     4    6   14       C        1   1   2   3   3   4   5   6   6   7   8   9  11  15  18  20  20  27  28  30  
 LCS      48       Q     4    6   14       C        1   1   2   3   3   3   5   6   6   7   8   9   9  12  13  16  18  22  23  30  
 LCS      49       D     4    6   14       C        1   1   2   3   3   4   5   6   6   8   8   9  12  13  16  17  20  25  28  30  
 LCS      50       Q     3    6   14       C        1   1   2   3   3   4   5   6   6   8   8   9  11  13  16  17  24  26  28  30  
 LCS      51       P     3    4   14       C        0   1   1   2   3   3   5   6   6   8   8  10  13  15  18  21  24  27  28  30  
 LCS      52       D     3    4   14       C        0   1   1   2   3   4   5   6   6   8   8  10  13  15  18  21  23  27  28  30  
 LCS      53       Y     3    3   30       E        1   1   1   1   2   2   3   7   8  13  15  16  18  20  22  23  24  27  28  30  
 LCS      54       L     3    3   31       E        1   1   1   1   1   2   4   5  11  13  15  16  18  20  22  23  24  27  28  30  
 LCS      55       N     3    3   31       E        1   1   1   1   1   2   4   5   6   9  10  16  18  20  22  23  24  27  28  30  
 LCS      56       A     3    3   31       E        0   1   1   1   1   4   5   6   7  12  15  16  18  20  22  23  24  27  28  30  
 LCS      57       A     3    3   31       E        0   1   1   1   7  10  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      58       V     3    3   31       E        1   1   1   1   2   2   3   8  11  14  17  18  19  21  22  23  24  27  28  30  
 LCS      59       A     3    3   31       E        1   1   1   1   2   2   3   4   7  11  13  14  15  20  22  23  24  27  28  30  
 LCS      60       L     3    3   31       E        1   1   1   9   9  10  10  12  13  15  17  18  19  21  22  23  24  27  28  30  
 LCS      61       E     3    3   31       E        1   1   1   1   5   6  10  11  13  15  17  18  19  21  22  23  24  27  28  30  
 LCS      62       T     3    4   31       E        1   1   1   2   2   3   5   8  13  15  17  18  19  21  22  23  24  27  28  30  
 LCS      63       S     3    4   31       C        1   1   1   2   2   3  10  10  12  14  16  18  19  21  22  23  24  25  27  28  
 LCS      64       L     3    4   31       C        1   1   1   5   6   9   9  10  11  12  13  15  17  17  18  22  24  25  26  28  
 LCS      65       A     3    4   31       C        1   1   1   2   2   5   6   7  10  12  13  14  15  16  17  19  21  24  25  28  
 LCS      66       P     3   15   31       H        1   1   1   1   4   6  10  12  12  13  15  16  17  20  22  23  24  27  28  30  
 LCS      67       E    14   16   31       H        7   8   8   9  10  12  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      68       E    14   16   31       H        7   8   8   9  10  12  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      69       L    14   16   31       H        7   8   8   9  10  12  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      70       L    14   16   31       H        7   8   8   9  10  12  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      71       N    14   16   31       H        7   8   8   9  10  12  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      72       H    14   16   31       H        7   8   8   9  10  12  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      73       T    14   16   31       H        7   8   8   9  10  12  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      74       Q    14   16   31       H        7   8   8   9  10  12  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      75       R    14   16   31       H        7   8   8   9  10  12  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      76       I    14   16   31       H        7   8   8   9  10  12  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      77       E    14   16   31       H        7   8   8   9  10  12  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      78       L    14   16   31       H        7   8   8   9  10  12  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      79       Q    14   16   31       H        3   8   8   9  10  12  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      80       Q    14   16   31       H        2   5   8   9   9  10  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      81       G     4   16   31       C        1   1   3   3   9  10  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      82       R     4   16   31       C        1   1   3   3  10  12  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      83       V     4    5   31       C        1   1   5   8  10  12  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      84       R     4    5   31       C        1   3   5   8  10  12  12  13  14  15  17  18  19  21  22  23  24  27  28  30  
 LCS      85       K     4    5   30       H        1   1   3   3   3   4  10  11  12  13  15  16  17  18  20  22  24  25  27  30  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   1.82 
 
 NUMBER_OF_CA_Tg:  158      NUMBER_OF_CA_Pr:   72      PERCENT_OF_CA:  45.57  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max      12      13      14      15      17      19      20      22      23      25      27      30      31      34      35      37      39      43      45      48  
 GDT PERCENT_OF_CA_Pr   16.67   18.06   19.44   20.83   23.61   26.39   27.78   30.56   31.94   34.72   37.50   41.67   43.06   47.22   48.61   51.39   54.17   59.72   62.50   66.67 
 GDT PERCENT_OF_CA_Tg    7.59    8.23    8.86    9.49   10.76   12.03   12.66   13.92   14.56   15.82   17.09   18.99   19.62   21.52   22.15   23.42   24.68   27.22   28.48   30.38 
 GDT FRAGMENT: Beg-End  67-78   67-79   67-80   60-80   22-84   19-84   22-84   19-84   19-84   19-84   19-84   15-84   19-84   15-84   15-84   19-84   19-84   19-84   19-84   19-85  
 GDT RMS_LOCAL           0.22    0.38    0.57    0.77    1.76    2.00    2.20    2.41    2.59    3.01    3.34    3.91    3.91    4.36    4.49    4.88    5.16    5.82    6.06    6.40 
 GDT RMS_ALL_CA         12.74   12.84   13.16   13.04   11.75   11.73   11.50   11.63   11.59   11.43   11.41   11.59   11.56   11.76   11.70   11.65   11.52   11.76   11.85   12.00 
 
 
 TEST (CA)  RMS =  10.78               (Number of atoms:   72) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   10.78         72    45.6   158     CRMSCA  
     CRN = ALL/NP  . . . . .    0.1497                            CRMSCA  
     SECONDARY STRUCTURE . .   10.51         51    64.6    79     CRMSCA  
     SURFACE . . . . . . . .   11.28         41    45.1    91     CRMSCA  
     BURIED  . . . . . . . .   10.08         31    46.3    67     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   10.78        288    36.8   782     CRMSMC  
     SECONDARY STRUCTURE . .   10.45        204    52.0   392     CRMSMC  
     SURFACE . . . . . . . .   11.38        164    36.4   451     CRMSMC  
     BURIED  . . . . . . . .    9.92        124    37.5   331     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    0.00          0     0.0   634     CRMSSC  
     RELIABLE SIDE CHAINS  .    0.00          0     0.0   528     CRMSSC  
     SECONDARY STRUCTURE . .    0.00          0     0.0   318     CRMSSC  
     SURFACE . . . . . . . .    0.00          0     0.0   395     CRMSSC  
     BURIED  . . . . . . . .    0.00          0     0.0   239     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   10.78        288    22.7  1266     CRMSALL 
     SECONDARY STRUCTURE . .   10.45        204    32.2   634     CRMSALL 
     SURFACE . . . . . . . .   11.38        164    21.6   759     CRMSALL 
     BURIED  . . . . . . . .    9.92        124    24.5   507     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    9.464      1.000       0.500     72    45.6   158     ERRCA  
     SECONDARY STRUCTURE . .    8.982      1.000       0.500     51    64.6    79     ERRCA  
     SURFACE . . . . . . . .    9.981      1.000       0.500     41    45.1    91     ERRCA  
     BURIED  . . . . . . . .    8.780      1.000       0.500     31    46.3    67     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    9.424      1.000       0.500    288    36.8   782     ERRMC  
     SECONDARY STRUCTURE . .    8.880      1.000       0.500    204    52.0   392     ERRMC  
     SURFACE . . . . . . . .   10.037      1.000       0.500    164    36.4   451     ERRMC  
     BURIED  . . . . . . . .    8.613      1.000       0.500    124    37.5   331     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.000      0.000       0.000      0     0.0   634     ERRSC  
     RELIABLE SIDE CHAINS  .    0.000      0.000       0.000      0     0.0   528     ERRSC  
     SECONDARY STRUCTURE . .    0.000      0.000       0.000      0     0.0   318     ERRSC  
     SURFACE . . . . . . . .    0.000      0.000       0.000      0     0.0   395     ERRSC  
     BURIED  . . . . . . . .    0.000      0.000       0.000      0     0.0   239     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    9.424      1.000       0.500    288    22.7  1266     ERRALL 
     SECONDARY STRUCTURE . .    8.880      1.000       0.500    204    32.2   634     ERRALL 
     SURFACE . . . . . . . .   10.037      1.000       0.500    164    21.6   759     ERRALL 
     BURIED  . . . . . . . .    8.613      1.000       0.500    124    24.5   507     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         4        12        19        36      72     158   DISTCA 
CA  (P)      0.00      2.53      7.59     12.03     22.78             158   DISTCA 
CA  (RMS)    0.00      1.53      2.39      2.97      5.79                   DISTCA 
 
ALL (N)         2        17        49        73       149     288    1266   DISTALL 
ALL (P)      0.16      1.34      3.87      5.77     11.77            1266   DISTALL 
ALL (RMS)    0.96      1.49      2.21      2.89      5.81                   DISTALL 
 
 
 
 
END of the results output 
