PFRMAT AL 
TARGET T0078 
AUTHOR 2746-8822-4809 
METHOD SEQFOLD(MSI) IMPLEMENTATION OF FOLD RECOGNITION 
METHOD BASED ON FISCHER AND EISENBERG PROT. SCI. 5, 943, 1996 
METHOD GLOBAL-LOCAL SEQUENCE ALIGNEMENT DRIVEN BY PREDICTED 
METHOD SECONDARY STRUCTURE  
METHOD CONSEQUENTLY - MODELS ARE ALWAYS BASED ON SINGLE SEQUENCE 
METHOD NOVEL SIGNIFICANCE ANALYSIS BASED ON RANDOM ALIGNMENTS  
MODEL 2 
PARENT 1gln 
L 11 I 37 
L 12 V 38 
N 13 R 39 
L 14 I 40 
E 15 E 41 
K 16 D 42 
I 17 T 43 
E 18 D 44 
E 19 R 45 
G 20 A 46 
L 21 R 47 
F 22 Y 48 
R 23 V 49 
G 24 P 50 
Q 25 G 51 
S 26 A 52 
E 27 E 53 
D 28 E 54 
REMARK TAR GAP 8 
L 29 L 63 
G 30 G 64 
L 31 L 65 
R 32 S 66 
Q 33 Y 67 
V 34 D 68 
F 35 E 69 
G 36 G 70 
G 37 P 71 
Q 38 D 72 
V 39 V 73 
V 40 A 74 
G 41 A 75 
REMARK TAR GAP 1 
Q 42 T 77 
A 43 G 78 
L 44 P 79 
Y 45 Y 80 
A 46 R 81 
A 47 Q 82 
K 48 S 83 
E 49 E 84 
T 50 R 85 
V 51 L 86 
P 52 P 87 
REMARK REF GAP 3 
L 56 L 88 
V 57 Y 89 
H 58 Q 90 
S 59 K 91 
F 60 Y 92 
H 61 A 93 
S 62 E 94 
Y 63 E 95 
F 64 L 96 
L 65 L 97 
R 66 K 98 
P 67 R 99 
G 68 G 100 
D 69 W 101 
S 70 A 102 
K 71 Y 103 
K 72 R 104 
P 73 A 105 
I 74 F 106 
REMARK TAR GAP 5 
I 75 L 112 
Y 76 E 113 
D 77 Q 114 
V 78 I 115 
E 79 R 116 
T 80 K 117 
L 81 E 118 
R 82 K 119 
D 83 G 120 
G 84 G 121 
N 85 Y 122 
S 86 D 123 
F 87 G 124 
S 88 R 125 
A 89 A 126 
R 90 R 127 
R 91 N 128 
V 92 I 129 
A 93 P 130 
A 94 P 131 
REMARK TAR GAP 6 
I 95 A 138 
Q 96 R 139 
N 97 R 140 
G 98 G 141 
K 99 E 142 
P 100 P 143 
REMARK REF GAP 3 
M 104 H 144 
T 105 V 145 
A 106 I 146 
S 107 R 147 
F 108 L 148 
Q 109 K 149 
A 110 V 150 
P 111 P 151 
E 112 R 152 
A 113 P 153 
G 114 G 154 
REMARK TAR GAP 13 
F 115 Y 168 
E 116 D 169 
H 117 N 170 
Q 118 Q 171 
K 119 E 172 
REMARK REF GAP 1 
M 121 I 173 
P 122 P 174 
S 123 D 175 
A 124 V 176 
P 125 V 177 
REMARK TAR GAP 2 
A 126 K 180 
P 127 S 181 
D 128 D 182 
G 129 G 183 
L 130 Y 184 
P 131 P 185 
S 132 T 186 
REMARK TAR GAP 3 
E 133 A 190 
T 134 N 191 
Q 135 V 192 
I 136 V 193 
A 137 D 194 
Q 138 D 195 
S 139 H 196 
L 140 L 197 
A 141 M 198 
H 142 G 199 
L 143 V 200 
L 144 T 201 
P 145 D 202 
P 146 V 203 
V 147 I 204 
L 148 R 205 
K 149 A 206 
D 150 E 207 
K 151 E 208 
F 152 W 209 
I 153 L 210 
C 154 V 211 
D 155 S 212 
R 156 T 213 
P 157 P 214 
L 158 I 215 
E 159 H 216 
V 160 V 217 
REMARK TAR GAP 9 
R 161 A 227 
P 162 P 228 
V 163 R 229 
E 164 F 230 
F 165 Y 231 
H 166 H 232 
N 167 M 233 
P 168 P 234 
L 169 L 235 
REMARK TAR GAP 5 
K 170 K 241 
G 171 T 242 
H 172 K 243 
V 173 I 244 
A 174 S 245 
E 175 K 246 
P 176 R 247 
H 177 K 248 
R 178 S 249 
Q 179 H 250 
V 180 T 251 
REMARK TAR GAP 3 
W 181 W 255 
I 182 Y 256 
R 183 K 257 
A 184 A 258 
N 185 E 259 
G 186 G 260 
S 187 F 261 
V 188 L 262 
P 189 P 263 
D 190 E 264 
D 191 A 265 
L 192 L 266 
R 193 R 267 
V 194 N 268 
H 195 Y 269 
Q 196 L 270 
Y 197 C 271 
L 198 L 272 
L 199 M 273 
G 200 G 274 
Y 201 F 275 
A 202 S 276 
REMARK REF GAP 17 
L 220 M 277 
E 221 P 278 
P 222 D 279 
G 223 G 280 
I 224 R 281 
Q 225 E 282 
I 226 I 283 
A 227 F 284 
T 228 T 285 
I 229 L 286 
D 230 E 287 
H 231 E 288 
REMARK REF GAP 3 
F 235 F 289 
H 236 I 290 
R 237 Q 291 
P 238 A 292 
F 239 F 293 
N 240 T 294 
REMARK REF GAP 3 
W 244 W 295 
TER 
END 
