 
PFRMAT AL  
TARGET T0062  
AUTHOR 2746-8822-4809  
METHOD SEQFOLD(MSI) IMPLEMENTATION OF FOLD RECOGNITION  
METHOD BASED ON FISCHER AND EISENBERG PROT. SCI. 5, 943, 1996  
METHOD GLOBAL-LOCAL SEQUENCE ALIGNEMENT DRIVEN BY PREDICTED  
METHOD SECONDARY STRUCTURE  
METHOD CONSEQUENTLY - MODELS ARE ALWAYS BASED ON SINGLE SEQUENCE  
METHOD NOVEL SIGNIFICANCE ANALYSIS BASED ON RANDOM ALIGNMENTS  
REMARK T62 HAS TWO DOMAINS ALIGNED TO DIFFERENT TEMPLATES  
REMARK LONG CONNECTING STRAND IS MISSING FROM THE ALIGNMENT   
MODEL 1  
REMARK REF GAP 1 
REMARK TAR GAP 1  
REMARK TAR GAP 2 
REMARK TAR GAP 4 
PARENT 2cnd  
R 98    K 132   
D 99    Q 133   
D 100   R 134   
E 101   N 135   
E 102   A 136   
R 103   R 137   
P 104   R 138   
M 105   L 139   
I 106   A 140   
L 107   M 141   
I 108   I 142   
A 109   C 143   
G 110   G 144   
G 111   G 145   
T 112   S 146   
G 113   G 147   
F 114   I 148   
S 115   T 149   
Y 116   P 150   
A 117   M 151   
R 118   Y 152   
S 119   Q 153   
I 120   I 154   
L 121   I 155   
L 122   Q 156   
T 123   A 157   
A 124   V 158   
L 125   L 159   
A 126   R 160   
R 127   D 161   
N 128   Q 162   
P 129   P 163   
REMARK TAR GAP 2 
N 130   H 166   
R 131   T 167   
D 132   E 168   
I 133   M 169   
T 134   H 170   
I 135   L 171   
Y 136   V 172   
W 137   Y 173   
G 138   A 174   
G 139   N 175   
R 140   R 176   
E 141   T 177   
E 142   E 178   
Q 143   D 179   
H 144   D 180   
L 145   I 181   
Y 146   L 182   
D 147   L 183   
L 148   R 184   
C 149   D 185   
E 150   E 186   
L 151   L 187   
E 152   D 188   
A 153   R 189   
L 154   W 190   
S 155   A 191   
L 156   A 192   
K 157   E 193   
H 158   Y 194   
P 159   P 195   
G 160   D 196   
REMARK TAR GAP 4 
L 161   W 201   
Q 162   Y 202   
V 163   V 203   
V 164   I 204   
P 165   D 205   
V 166   Q 206   
V 167   V 207   
E 168   K 208   
Q 169   R 209   
P 170   P 210   
E 171   E 211   
A 172   E 212   
G 173   G 213   
W 174   W 214   
R 175   K 215   
G 176   Y 216   
R 177   S 217   
T 178   V 218   
G 179   G 219   
T 180   F 220   
V 181   V 221   
L 182   T 222   
T 183   E 223   
A 184   A 224   
V 185   V 225   
L 186   L 226   
Q 187   R 227   
D 188   E 228   
H 189   H 229   
TER 
END 
