 
PFRMAT AL 
TARGET T0051 
AUTHOR 8120-3487-1357 
REMARK Matrix Used: BS_30_25%  
REMARK Alignment Method Used: Quasi-Global Dynamic Programming 
METHOD Sequence-Structure alignment based on the environments 
METHOD published in: Deerfield, Holland-Minkley, Geigel, and  
METHOD Nicholas 1997. "Classification of the Environment of  
METHOD Protein Residues" J. Prot. Chem. 16:441-446. 
METHOD  
METHOD This test uses our latest (unpublished) environment  
METHOD classifications and extentions. 
MODEL  2 
PARENT 1ctd_B 
K  133 K    1 
G  134 S    2 
C  135 E    3 
R  136 E    4 
K  137 E    5 
V  138 L    6 
L  139 A    7 
E  140 N    8 
A  141 A    9 
V  142 F   10 
N  143 R   11 
L  144 I   12 
P  145 F   13 
L  146 D   14 
Q  147 K   15 
A  148 N   16 
R  149 A   17 
H  150 D   18 
G  151 G   19 
T  152 Y   20 
P  153 I   21 
D  154 D   22 
S  155 I   23 
R  156 E   24 
L  157 E   25 
L  158 L   26 
A  159 G   27 
E  160 E   28 
I  161 I   29 
I  162 L   30 
H  163 R   31 
A  164 A   32 
G  165 T   33 
G  166 G   34 
TER 
END 
