PFRMAT AL 
TARGET T0045 
AUTHOR 2746-8822-4809 
METHOD SEQFOLD(MSI) IMPLEMENTATION OF FOLD RECOGNITION 
METHOD BASED ON FISCHER AND EISENBERG PROT. SCI. 5, 943, 1996 
METHOD GLOBAL-LOCAL SEQUENCE ALIGNEMENT DRIVEN BY PREDICTED 
METHOD SECONDARY STRUCTURE  
METHOD CONSEQUENTLY - MODELS ARE ALWAYS BASED ON SINGLE SEQUENCE 
METHOD NOVEL SIGNIFICANCE ANALYSIS BASED ON RANDOM ALIGNMENTS  
MODEL 1 
PARENT 1col_A 
F 29    M 22    
G 30    G 23    
D 31    D 24    
E 32    K 25    
A 33    I 26    
A 34    G 27    
E 35    E 28    
K 36    H 29    
L 37    L 30    
G 38    G 31    
REMARK TAR GAP 9 
I 39    I 41    
D 40    A 42    
P 41    D 43    
N 42    N 44    
REMARK TAR GAP 9 
R 43    R 54    
S 44    S 55    
F 45    F 56    
K 46    D 57    
T 47    D 58    
L 48    A 59    
L 49    M 60    
V 50    A 61    
A 51    S 62    
REMARK TAR GAP 12 
E 52    N 75    
N 53    K 76    
G 54    A 77    
D 55    D 78    
Q 56    R 79    
K 57    D 80    
K 58    A 81    
L 59    L 82    
REMARK TAR GAP 2 
A 60    A 85    
C 61    W 86    
F 62    K 87    
V 63    H 88    
L 64    V 89    
A 65    D 90    
T 66    A 91    
A 67    Q 92    
N 68    D 93    
M 69    M 94    
L 70    A 95    
N 71    N 96    
REMARK TAR GAP 1 
L 72    L 98    
K 73    G 99    
K 74    N 100   
A 75    L 101   
A 76    S 102   
K 77    K 103   
S 78    A 104   
I 79    F 105   
G 80    K 106   
V 81    V 107   
K 82    A 108   
K 83    D 109   
V 84    V 110   
E 85    V 111   
M 86    M 112   
A 87    K 113   
D 88    V 114   
K 89    E 115   
D 90    K 116   
A 91    V 117   
A 92    R 118   
Q 93    E 119   
K 94    K 120   
S 95    S 121   
REMARK TAR GAP 1 
T 96    E 123   
G 97    G 124   
Y 98    Y 125   
L 99    E 126   
V 100   T 127   
G 101   G 128   
G 102   N 129   
I 103   W 130   
S 104   G 131   
P 105   P 132   
L 106   L 133   
REMARK TAR GAP 10 
G 107   G 144   
Q 108   I 145   
K 109   A 146   
K 110   S 147   
R 111   S 148   
V 112   V 149   
K 113   A 150   
T 114   L 151   
V 115   G 152   
I 116   I 153   
K 117   F 154   
S 118   S 155   
T 119   A 156   
A 120   T 157   
L 121   L 158   
E 122   G 159   
F 123   A 160   
E 124   Y 161   
T 125   A 162   
I 126   L 163   
Y 127   S 164   
V 128   L 165   
REMARK REF GAP 2 
G 131   G 166   
K 132   V 167   
R 133   P 168   
G 134   A 169   
L 135   I 170   
S 136   A 171   
V 137   V 172   
E 138   G 173   
I 139   I 174   
A 140   A 175   
P 141   G 176   
Q 142   I 177   
D 143   L 178   
L 144   L 179   
A 145   A 180   
K 146   A 181   
V 147   V 182   
L 148   V 183   
G 149   G 184   
A 150   A 185   
REMARK TAR GAP 4 
E 151   K 190   
F 152   F 191   
T 153   A 192   
D 154   D 193   
I 155   A 194   
V 156   L 195   
D 157   N 196   
E 158   N 197   
TER 
END 
