PFRMAT AL 
TARGET T0045 
AUTHOR 3707-4066-9021 
REMARK FORESST ordered by Z scores, length ratios and J scores using 
REMARK SIMPA with homologues as secondary structure predictions. 
METHOD FORESST is a fold recognition method based on secondary structure 
METHOD predictions and hidden Markov models of observed secondary structures. 
METHOD Di Francesco V, Garnier J and Munson PJ., 1997, Protein Topology  
METHOD recognition METHOD from secondary structure sequences: application  
METHOD of the hidden Markov model to the alpha class proteins.  
METHOD J. Mol. Biol.267:446-463. 
MODEL  1 
PARENT 8atcA 
M   1    H  134 
T   2    P  135 
P   3    T  136 
A   4    Q  137 
I   5    T  138 
D   6    L  139 
L   7    L  140 
L   8    D  141 
K   9    L  142 
K  10    F  143 
Q  11    L  152 
K  12    D  153 
I  13    N  154 
P  14    L  155 
F  15    H  156 
I  16    V  157 
L  17    A  158 
H  18    M  159 
T  19    V  160 
Y  20    G  161 
D  21    D  162 
H  22    L  163 
D  23    K  164 
P  24    Y  165 
N  25    G  166 
N  26    R  167 
Q  27    T  168 
H  28    V  169 
F  29    H  170 
G  30    S  171 
D  31    L  172 
E  32    T  173 
A  33    Q  174 
A  34    A  175 
E  35    L  176 
K  36    A  177 
L  37    K  178 
G  38    F  179 
I  39    D  180 
D  40    G  181 
P  41    N  182 
T  47    R  183 
L  48    F  184 
L  49    Y  185 
V  50    F  186 
A  51    I  187 
E  52    A  188 
N  53    P  189 
G  54    D  190 
D  55    A  191 
Q  56    L  192 
K  57    A  193 
K  58    M  194 
N  68    P  195 
M  69    E  196 
L  70    Y  197 
N  71    I  198 
L  72    L  199 
K  73    D  200 
K  74    M  201 
A  75    L  202 
A  76    D  203 
K  77    E  204 
S  78    K  205 
I  79    G  206 
G  80    I  207 
V  81    A  208 
K  82    W  209 
K  83    S  210 
V  84    L  211 
E  85    H  212 
M  86    S  213 
A  87    S  214 
D  88    I  215 
K  89    E  216 
D  90    E  217 
A  91    V  218 
A  92    M  219 
Q  93    A  220 
K  94    E  221 
S  95    V  222 
T  96    D  223 
G  97    I  224 
Y  98    L  225 
L  99    Y  226 
V 100    M  227 
G 101    T  228 
G 102    R  229 
I 103    V  230 
S 104    Q  231 
P 105    K  232 
L 106    E  233 
G 107    R  234 
Q 108    L  235 
K 109    D  236 
K 110    P  237 
R 111    S  238 
V 112    E  239 
K 113    A  251 
T 114    S  252 
V 115    D  253 
I 116    L  254 
K 117    H  255 
S 118    N  256 
T 119    A  257 
A 120    K  258 
L 121    A  259 
E 122    N  260 
F 123    M  261 
E 124    K  262 
T 125    V  263 
I 126    L  264 
Y 127    H  265 
V 128    P  266 
S 129    L  267 
G 130    P  268 
G 131    R  269 
K 132    V  270 
R 133    D  271 
G 134    E  272 
L 135    I  273 
S 136    A  274 
Q 142    T  275 
D 143    D  276 
L 144    V  277 
A 145    D  278 
K 146    K  279 
V 147    T  280 
L 148    P  281 
G 149    H  282 
A 150    A  283 
E 151    W  284 
F 152    Y  285 
T 153    F  286 
D 154    Q  287 
I 155    Q  288 
V 156    A  289 
D 157    G  290 
E 158    N  291 
TER 
END 
