####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS473_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS473_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.70 1.70 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.70 1.70 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 2 - 19 0.95 2.47 LONGEST_CONTINUOUS_SEGMENT: 18 3 - 20 0.98 2.21 LONGEST_CONTINUOUS_SEGMENT: 18 6 - 23 0.96 1.83 LCS_AVERAGE: 33.85 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 41 41 3 8 23 33 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 18 41 41 9 14 17 22 36 39 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 18 41 41 11 14 18 32 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 18 41 41 11 14 18 32 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 18 41 41 11 14 18 32 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 18 41 41 11 14 25 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 18 41 41 10 14 26 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 18 41 41 11 14 25 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 18 41 41 11 17 26 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 18 41 41 11 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 18 41 41 11 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 18 41 41 11 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 18 41 41 12 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 18 41 41 12 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 18 41 41 12 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 18 41 41 7 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 18 41 41 12 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 18 41 41 12 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 18 41 41 12 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 18 41 41 5 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 18 41 41 4 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 18 41 41 3 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 18 41 41 12 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 17 41 41 4 11 22 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 11 41 41 4 8 19 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 11 41 41 4 12 26 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 11 41 41 5 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 11 41 41 4 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 11 41 41 12 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 11 41 41 12 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 11 41 41 12 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 11 41 41 12 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 11 41 41 4 11 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 9 41 41 3 9 25 33 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 9 41 41 3 9 17 23 35 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 6 41 41 4 12 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 6 41 41 5 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 6 41 41 12 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 6 41 41 3 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 6 41 41 7 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 6 41 41 3 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 77.95 ( 33.85 100.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 20 27 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 29.27 48.78 65.85 82.93 92.68 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.33 0.55 0.87 1.27 1.48 1.62 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 GDT RMS_ALL_AT 2.17 2.39 2.09 1.80 1.73 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: E 24 E 24 # possible swapping detected: E 30 E 30 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 2.146 0 0.036 0.145 4.573 29.545 30.606 2.970 LGA Q 2 Q 2 3.431 0 0.222 1.387 4.454 25.000 22.828 3.738 LGA E 3 E 3 2.518 0 0.053 1.449 8.073 32.727 17.576 7.957 LGA T 4 T 4 2.585 0 0.035 1.110 4.931 32.727 32.208 4.931 LGA R 5 R 5 2.354 0 0.050 1.063 4.917 44.545 34.711 4.917 LGA K 6 K 6 1.581 0 0.033 1.253 6.409 58.182 35.152 5.929 LGA K 7 K 7 1.328 0 0.070 0.668 1.610 65.455 62.222 1.610 LGA C 8 C 8 1.563 0 0.035 0.756 4.229 61.818 50.606 4.229 LGA T 9 T 9 1.072 0 0.033 0.085 1.289 73.636 74.805 1.128 LGA E 10 E 10 0.442 0 0.032 0.993 4.670 86.364 55.354 4.670 LGA M 11 M 11 1.020 0 0.102 0.146 1.450 69.545 67.500 1.450 LGA K 12 K 12 1.305 0 0.043 0.621 3.389 65.455 54.949 3.051 LGA K 13 K 13 1.098 0 0.031 0.630 1.852 65.455 71.111 1.852 LGA K 14 K 14 1.045 0 0.042 0.604 2.267 65.455 69.697 2.267 LGA F 15 F 15 0.986 0 0.143 0.265 2.425 73.636 60.992 2.068 LGA K 16 K 16 0.410 0 0.148 1.290 4.840 90.909 60.000 4.119 LGA N 17 N 17 1.070 0 0.086 0.486 2.070 65.909 60.455 2.070 LGA C 18 C 18 0.770 0 0.033 0.076 1.138 86.364 82.121 1.138 LGA E 19 E 19 0.693 0 0.239 0.484 1.650 81.818 78.384 0.614 LGA V 20 V 20 1.331 0 0.063 0.069 1.825 61.818 61.299 1.515 LGA R 21 R 21 1.625 0 0.069 1.194 4.008 61.818 44.959 4.008 LGA C 22 C 22 1.687 0 0.151 0.241 3.401 66.364 53.636 3.401 LGA D 23 D 23 1.048 0 0.263 1.289 5.228 52.273 38.182 2.894 LGA E 24 E 24 1.635 0 0.057 0.612 5.730 51.364 27.273 5.670 LGA S 25 S 25 2.286 0 0.030 0.632 2.859 44.545 45.152 1.492 LGA N 26 N 26 1.116 0 0.039 1.171 4.783 73.636 47.955 4.783 LGA H 27 H 27 0.814 0 0.066 0.298 1.743 74.545 67.636 1.542 LGA C 28 C 28 1.641 0 0.028 0.790 4.435 65.909 51.212 4.435 LGA V 29 V 29 1.380 0 0.083 0.109 1.852 58.182 57.143 1.479 LGA E 30 E 30 1.252 0 0.122 0.575 2.526 61.818 51.919 1.825 LGA V 31 V 31 0.812 0 0.072 0.101 0.899 81.818 81.818 0.763 LGA R 32 R 32 0.700 0 0.132 1.102 3.111 81.818 70.248 1.731 LGA C 33 C 33 1.293 0 0.471 0.540 3.640 52.273 59.394 0.840 LGA S 34 S 34 2.507 0 0.150 0.170 3.949 26.818 28.788 2.146 LGA D 35 D 35 3.480 0 0.128 1.119 4.542 27.727 17.500 4.542 LGA T 36 T 36 1.573 0 0.207 1.108 5.162 65.909 43.117 5.162 LGA K 37 K 37 1.303 0 0.034 1.149 4.249 65.909 53.535 4.249 LGA Y 38 Y 38 1.191 0 0.091 1.304 5.811 65.455 41.515 5.811 LGA T 39 T 39 2.116 0 0.120 0.104 2.623 41.364 38.442 2.474 LGA L 40 L 40 2.211 0 0.604 0.916 4.104 27.273 28.864 2.137 LGA C 41 C 41 2.449 0 0.485 1.168 6.643 19.545 20.000 3.773 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 1.696 1.819 2.432 58.603 50.021 30.643 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 41 1.70 82.927 91.581 2.283 LGA_LOCAL RMSD: 1.696 Number of atoms: 41 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.696 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 1.696 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.171903 * X + -0.913292 * Y + 0.369252 * Z + 0.054443 Y_new = 0.830620 * X + -0.335903 * Y + -0.444116 * Z + 0.162723 Z_new = 0.529641 * X + 0.230363 * Y + 0.816341 * Z + -0.842083 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.774873 -0.558177 0.275038 [DEG: 101.6927 -31.9812 15.7585 ] ZXZ: 0.693615 0.615748 1.160534 [DEG: 39.7412 35.2798 66.4937 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS473_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS473_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 41 1.70 91.581 1.70 REMARK ---------------------------------------------------------- MOLECULE T0955TS473_1 PFRMAT TS TARGET T0955 MODEL 1 PARENT N/A ATOM 1 N SER 1 -2.561 -14.046 1.171 1.00 5.22 ATOM 5 CA SER 1 -1.162 -14.505 1.253 1.00 5.22 ATOM 6 CB SER 1 -0.468 -14.427 -0.126 1.00 5.82 ATOM 7 OG SER 1 -1.395 -14.643 -1.186 1.00 5.82 ATOM 9 C SER 1 -0.417 -13.646 2.217 1.00 5.22 ATOM 10 O SER 1 -0.577 -12.423 2.236 1.00 5.22 ATOM 11 N GLN 2 0.437 -14.301 3.039 1.00 4.01 ATOM 13 CA GLN 2 1.228 -13.625 4.034 1.00 4.01 ATOM 14 CB GLN 2 1.932 -14.563 5.036 1.00 4.58 ATOM 15 CG GLN 2 0.961 -15.309 5.975 1.00 4.58 ATOM 16 CD GLN 2 0.144 -14.332 6.836 1.00 4.58 ATOM 17 OE1 GLN 2 0.648 -13.388 7.445 1.00 4.58 ATOM 18 NE2 GLN 2 -1.196 -14.564 6.874 1.00 4.58 ATOM 21 C GLN 2 2.225 -12.701 3.406 1.00 4.01 ATOM 22 O GLN 2 2.487 -11.637 3.962 1.00 4.01 ATOM 23 N GLU 3 2.771 -13.065 2.219 1.00 4.01 ATOM 25 CA GLU 3 3.726 -12.241 1.520 1.00 4.01 ATOM 26 CB GLU 3 4.392 -12.980 0.346 1.00 4.58 ATOM 27 CG GLU 3 5.335 -14.117 0.789 1.00 4.58 ATOM 28 CD GLU 3 6.456 -13.606 1.699 1.00 4.58 ATOM 29 OE1 GLU 3 7.195 -12.668 1.301 1.00 4.58 ATOM 30 OE2 GLU 3 6.577 -14.149 2.828 1.00 4.58 ATOM 31 C GLU 3 3.082 -10.967 1.024 1.00 4.01 ATOM 32 O GLU 3 3.694 -9.900 1.095 1.00 4.01 ATOM 33 N THR 4 1.811 -11.051 0.550 1.00 4.01 ATOM 35 CA THR 4 1.063 -9.912 0.065 1.00 4.01 ATOM 36 CB THR 4 -0.225 -10.333 -0.607 1.00 4.58 ATOM 37 CG2 THR 4 -1.015 -9.105 -1.109 1.00 4.58 ATOM 38 OG1 THR 4 0.083 -11.157 -1.723 1.00 4.58 ATOM 40 C THR 4 0.782 -8.997 1.241 1.00 4.01 ATOM 41 O THR 4 0.887 -7.777 1.110 1.00 4.01 ATOM 42 N ARG 5 0.472 -9.585 2.426 1.00 4.01 ATOM 44 CA ARG 5 0.198 -8.835 3.629 1.00 4.01 ATOM 45 CB ARG 5 -0.292 -9.709 4.789 1.00 4.58 ATOM 46 CG ARG 5 -1.711 -10.165 4.507 1.00 4.58 ATOM 47 CD ARG 5 -2.342 -11.096 5.524 1.00 4.58 ATOM 48 NE ARG 5 -3.729 -11.298 5.017 1.00 4.58 ATOM 50 CZ ARG 5 -4.612 -12.150 5.619 1.00 4.58 ATOM 51 NH1 ARG 5 -5.867 -12.258 5.097 1.00 4.58 ATOM 54 NH2 ARG 5 -4.276 -12.885 6.721 1.00 4.58 ATOM 57 C ARG 5 1.414 -8.084 4.078 1.00 4.01 ATOM 58 O ARG 5 1.290 -6.926 4.474 1.00 4.01 ATOM 59 N LYS 6 2.613 -8.709 3.966 1.00 4.01 ATOM 61 CA LYS 6 3.869 -8.101 4.345 1.00 4.01 ATOM 62 CB LYS 6 5.062 -9.055 4.194 1.00 4.58 ATOM 63 CG LYS 6 5.088 -10.189 5.213 1.00 4.58 ATOM 64 CD LYS 6 6.245 -11.156 4.987 1.00 4.58 ATOM 65 CE LYS 6 6.235 -12.355 5.930 1.00 4.58 ATOM 66 NZ LYS 6 7.326 -13.274 5.558 1.00 4.58 ATOM 70 C LYS 6 4.149 -6.919 3.459 1.00 4.01 ATOM 71 O LYS 6 4.586 -5.880 3.952 1.00 4.01 ATOM 72 N LYS 7 3.851 -7.042 2.140 1.00 4.01 ATOM 74 CA LYS 7 4.060 -5.991 1.173 1.00 4.01 ATOM 75 CB LYS 7 3.760 -6.473 -0.261 1.00 4.58 ATOM 76 CG LYS 7 4.003 -5.449 -1.369 1.00 4.58 ATOM 77 CD LYS 7 3.766 -6.021 -2.762 1.00 4.58 ATOM 78 CE LYS 7 3.985 -5.008 -3.885 1.00 4.58 ATOM 79 NZ LYS 7 3.819 -5.676 -5.191 1.00 4.58 ATOM 83 C LYS 7 3.171 -4.814 1.487 1.00 4.01 ATOM 84 O LYS 7 3.640 -3.675 1.471 1.00 4.01 ATOM 85 N CYS 8 1.888 -5.076 1.840 1.00 4.01 ATOM 87 CA CYS 8 0.933 -4.045 2.162 1.00 4.01 ATOM 88 CB CYS 8 -0.490 -4.598 2.337 1.00 4.58 ATOM 89 SG CYS 8 -1.192 -5.161 0.757 1.00 4.58 ATOM 90 C CYS 8 1.327 -3.316 3.421 1.00 4.01 ATOM 91 O CYS 8 1.236 -2.090 3.470 1.00 4.01 ATOM 92 N THR 9 1.839 -4.057 4.438 1.00 4.01 ATOM 94 CA THR 9 2.259 -3.501 5.706 1.00 4.01 ATOM 95 CB THR 9 2.627 -4.587 6.704 1.00 4.58 ATOM 96 CG2 THR 9 3.070 -3.983 8.053 1.00 4.58 ATOM 97 OG1 THR 9 1.495 -5.408 6.946 1.00 4.58 ATOM 99 C THR 9 3.440 -2.584 5.484 1.00 4.01 ATOM 100 O THR 9 3.463 -1.480 6.032 1.00 4.01 ATOM 101 N GLU 10 4.404 -3.000 4.623 1.00 4.01 ATOM 103 CA GLU 10 5.580 -2.219 4.325 1.00 4.01 ATOM 104 CB GLU 10 6.625 -2.976 3.482 1.00 4.58 ATOM 105 CG GLU 10 7.361 -4.096 4.238 1.00 4.58 ATOM 106 CD GLU 10 8.091 -3.543 5.465 1.00 4.58 ATOM 107 OE1 GLU 10 8.895 -2.581 5.326 1.00 4.58 ATOM 108 OE2 GLU 10 7.840 -4.081 6.574 1.00 4.58 ATOM 109 C GLU 10 5.228 -0.950 3.610 1.00 4.01 ATOM 110 O GLU 10 5.805 0.097 3.906 1.00 4.01 ATOM 111 N MET 11 4.237 -1.014 2.687 1.00 4.01 ATOM 113 CA MET 11 3.798 0.135 1.936 1.00 4.01 ATOM 114 CB MET 11 2.823 -0.191 0.794 1.00 4.58 ATOM 115 CG MET 11 3.440 -1.016 -0.343 1.00 4.58 ATOM 116 SD MET 11 4.883 -0.293 -1.190 1.00 4.58 ATOM 117 CE MET 11 6.180 -1.263 -0.364 1.00 4.58 ATOM 118 C MET 11 3.140 1.131 2.841 1.00 4.01 ATOM 119 O MET 11 3.454 2.317 2.755 1.00 4.01 ATOM 120 N LYS 12 2.380 0.640 3.854 1.00 4.01 ATOM 122 CA LYS 12 1.709 1.483 4.813 1.00 4.01 ATOM 123 CB LYS 12 0.728 0.735 5.728 1.00 4.58 ATOM 124 CG LYS 12 -0.536 0.246 5.025 1.00 4.58 ATOM 125 CD LYS 12 -1.508 -0.423 5.992 1.00 4.58 ATOM 126 CE LYS 12 -2.775 -0.962 5.335 1.00 4.58 ATOM 127 NZ LYS 12 -3.666 -1.493 6.383 1.00 4.58 ATOM 131 C LYS 12 2.699 2.185 5.700 1.00 4.01 ATOM 132 O LYS 12 2.492 3.351 6.037 1.00 4.01 ATOM 133 N LYS 13 3.802 1.488 6.076 1.00 4.01 ATOM 135 CA LYS 13 4.842 2.034 6.920 1.00 4.01 ATOM 136 CB LYS 13 5.939 1.008 7.264 1.00 4.58 ATOM 137 CG LYS 13 5.547 -0.121 8.214 1.00 4.58 ATOM 138 CD LYS 13 6.698 -1.103 8.433 1.00 4.58 ATOM 139 CE LYS 13 6.350 -2.299 9.316 1.00 4.58 ATOM 140 NZ LYS 13 7.500 -3.224 9.368 1.00 4.58 ATOM 144 C LYS 13 5.552 3.152 6.205 1.00 4.01 ATOM 145 O LYS 13 5.839 4.187 6.806 1.00 4.01 ATOM 146 N LYS 14 5.825 2.961 4.893 1.00 4.01 ATOM 148 CA LYS 14 6.513 3.920 4.070 1.00 4.01 ATOM 149 CB LYS 14 6.963 3.298 2.738 1.00 4.58 ATOM 150 CG LYS 14 8.088 2.282 2.932 1.00 4.58 ATOM 151 CD LYS 14 8.556 1.594 1.653 1.00 4.58 ATOM 152 CE LYS 14 9.617 0.523 1.911 1.00 4.58 ATOM 153 NZ LYS 14 10.006 -0.118 0.642 1.00 4.58 ATOM 157 C LYS 14 5.689 5.138 3.767 1.00 4.01 ATOM 158 O LYS 14 6.215 6.253 3.787 1.00 4.01 ATOM 159 N PHE 15 4.372 4.955 3.511 1.00 4.01 ATOM 161 CA PHE 15 3.503 6.052 3.178 1.00 4.01 ATOM 162 CB PHE 15 2.720 5.805 1.862 1.00 4.58 ATOM 163 CG PHE 15 3.625 5.680 0.678 1.00 4.58 ATOM 164 CD1 PHE 15 4.000 4.408 0.223 1.00 4.58 ATOM 165 CE1 PHE 15 4.837 4.260 -0.885 1.00 4.58 ATOM 166 CZ PHE 15 5.298 5.395 -1.557 1.00 4.58 ATOM 167 CE2 PHE 15 4.926 6.669 -1.118 1.00 4.58 ATOM 168 CD2 PHE 15 4.090 6.811 -0.006 1.00 4.58 ATOM 169 C PHE 15 2.524 6.207 4.312 1.00 4.01 ATOM 170 O PHE 15 1.364 5.795 4.231 1.00 4.01 ATOM 171 N LYS 16 3.005 6.808 5.423 1.00 5.22 ATOM 173 CA LYS 16 2.209 7.033 6.607 1.00 5.22 ATOM 174 CB LYS 16 3.059 7.441 7.826 1.00 5.82 ATOM 175 CG LYS 16 3.942 6.335 8.403 1.00 5.82 ATOM 176 CD LYS 16 4.794 6.803 9.585 1.00 5.82 ATOM 177 CE LYS 16 5.736 5.732 10.142 1.00 5.82 ATOM 178 NZ LYS 16 6.565 6.306 11.223 1.00 5.82 ATOM 182 C LYS 16 1.181 8.117 6.408 1.00 5.22 ATOM 183 O LYS 16 0.016 7.931 6.759 1.00 5.22 ATOM 184 N ASN 17 1.593 9.266 5.821 1.00 5.22 ATOM 186 CA ASN 17 0.714 10.391 5.596 1.00 5.22 ATOM 187 CB ASN 17 1.484 11.692 5.272 1.00 5.82 ATOM 188 CG ASN 17 2.178 12.265 6.511 1.00 5.82 ATOM 189 OD1 ASN 17 1.835 12.022 7.669 1.00 5.82 ATOM 190 ND2 ASN 17 3.235 13.072 6.247 1.00 5.82 ATOM 193 C ASN 17 -0.258 10.165 4.475 1.00 5.22 ATOM 194 O ASN 17 -1.439 10.493 4.601 1.00 5.22 ATOM 195 N CYS 18 0.230 9.579 3.362 1.00 5.22 ATOM 197 CA CYS 18 -0.534 9.309 2.171 1.00 5.22 ATOM 198 CB CYS 18 0.371 8.913 0.996 1.00 5.82 ATOM 199 SG CYS 18 1.495 10.257 0.509 1.00 5.82 ATOM 200 C CYS 18 -1.576 8.240 2.330 1.00 5.22 ATOM 201 O CYS 18 -1.431 7.332 3.150 1.00 5.22 ATOM 202 N GLU 19 -2.692 8.376 1.566 1.00 5.22 ATOM 204 CA GLU 19 -3.773 7.420 1.571 1.00 5.22 ATOM 205 CB GLU 19 -5.023 7.929 0.830 1.00 5.82 ATOM 206 CG GLU 19 -6.234 6.981 0.884 1.00 5.82 ATOM 207 CD GLU 19 -7.449 7.557 0.153 1.00 5.82 ATOM 208 OE1 GLU 19 -8.459 6.811 0.083 1.00 5.82 ATOM 209 OE2 GLU 19 -7.420 8.717 -0.336 1.00 5.82 ATOM 210 C GLU 19 -3.271 6.189 0.864 1.00 5.22 ATOM 211 O GLU 19 -2.719 6.291 -0.232 1.00 5.22 ATOM 212 N VAL 20 -3.440 5.004 1.497 1.00 5.22 ATOM 214 CA VAL 20 -2.990 3.765 0.918 1.00 5.22 ATOM 215 CB VAL 20 -1.871 3.078 1.717 1.00 5.82 ATOM 216 CG1 VAL 20 -1.438 1.753 1.057 1.00 5.82 ATOM 217 CG2 VAL 20 -0.677 4.033 1.892 1.00 5.82 ATOM 218 C VAL 20 -4.171 2.833 0.841 1.00 5.22 ATOM 219 O VAL 20 -4.835 2.550 1.840 1.00 5.22 ATOM 220 N ARG 21 -4.461 2.385 -0.392 1.00 4.01 ATOM 222 CA ARG 21 -5.488 1.438 -0.733 1.00 4.01 ATOM 223 CB ARG 21 -6.268 1.808 -2.015 1.00 4.58 ATOM 224 CG ARG 21 -7.337 0.784 -2.417 1.00 4.58 ATOM 225 CD ARG 21 -8.206 1.185 -3.606 1.00 4.58 ATOM 226 NE ARG 21 -9.095 0.019 -3.907 1.00 4.58 ATOM 228 CZ ARG 21 -8.770 -0.918 -4.857 1.00 4.58 ATOM 229 NH1 ARG 21 -9.574 -2.009 -5.016 1.00 4.58 ATOM 232 NH2 ARG 21 -7.670 -0.781 -5.661 1.00 4.58 ATOM 235 C ARG 21 -4.756 0.162 -1.010 1.00 4.01 ATOM 236 O ARG 21 -3.840 0.155 -1.834 1.00 4.01 ATOM 237 N CYS 22 -5.146 -0.941 -0.335 1.00 4.01 ATOM 239 CA CYS 22 -4.506 -2.208 -0.548 1.00 4.01 ATOM 240 CB CYS 22 -3.561 -2.640 0.594 1.00 4.58 ATOM 241 SG CYS 22 -2.124 -1.553 0.803 1.00 4.58 ATOM 242 C CYS 22 -5.560 -3.257 -0.668 1.00 4.01 ATOM 243 O CYS 22 -6.255 -3.558 0.307 1.00 4.01 ATOM 244 N ASP 23 -5.739 -3.793 -1.899 1.00 4.01 ATOM 246 CA ASP 23 -6.692 -4.841 -2.120 1.00 4.01 ATOM 247 CB ASP 23 -7.572 -4.634 -3.374 1.00 4.58 ATOM 248 CG ASP 23 -8.648 -5.717 -3.543 1.00 4.58 ATOM 249 OD1 ASP 23 -8.711 -6.722 -2.782 1.00 4.58 ATOM 250 OD2 ASP 23 -9.473 -5.513 -4.469 1.00 4.58 ATOM 251 C ASP 23 -5.820 -6.052 -2.262 1.00 4.01 ATOM 252 O ASP 23 -5.094 -6.204 -3.247 1.00 4.01 ATOM 253 N GLU 24 -5.923 -6.950 -1.263 1.00 5.22 ATOM 255 CA GLU 24 -5.142 -8.154 -1.191 1.00 5.22 ATOM 256 CB GLU 24 -5.183 -8.823 0.195 1.00 5.82 ATOM 257 CG GLU 24 -4.437 -8.003 1.260 1.00 5.82 ATOM 258 CD GLU 24 -4.525 -8.619 2.659 1.00 5.82 ATOM 259 OE1 GLU 24 -5.144 -9.699 2.869 1.00 5.82 ATOM 260 OE2 GLU 24 -3.960 -7.967 3.574 1.00 5.82 ATOM 261 C GLU 24 -5.486 -9.170 -2.235 1.00 5.22 ATOM 262 O GLU 24 -4.582 -9.839 -2.734 1.00 5.22 ATOM 263 N SER 25 -6.786 -9.293 -2.599 1.00 5.22 ATOM 265 CA SER 25 -7.221 -10.247 -3.594 1.00 5.22 ATOM 266 CB SER 25 -8.761 -10.369 -3.650 1.00 5.82 ATOM 267 OG SER 25 -9.366 -9.147 -4.054 1.00 5.82 ATOM 269 C SER 25 -6.696 -9.886 -4.959 1.00 5.22 ATOM 270 O SER 25 -6.182 -10.747 -5.678 1.00 5.22 ATOM 271 N ASN 26 -6.793 -8.586 -5.319 1.00 5.22 ATOM 273 CA ASN 26 -6.333 -8.066 -6.581 1.00 5.22 ATOM 274 CB ASN 26 -6.967 -6.711 -6.970 1.00 5.82 ATOM 275 CG ASN 26 -8.442 -6.870 -7.352 1.00 5.82 ATOM 276 OD1 ASN 26 -8.948 -7.934 -7.713 1.00 5.82 ATOM 277 ND2 ASN 26 -9.174 -5.728 -7.298 1.00 5.82 ATOM 280 C ASN 26 -4.845 -7.882 -6.615 1.00 5.22 ATOM 281 O ASN 26 -4.259 -7.881 -7.699 1.00 5.22 ATOM 282 N HIS 27 -4.206 -7.749 -5.418 1.00 5.22 ATOM 284 CA HIS 27 -2.790 -7.513 -5.217 1.00 5.22 ATOM 285 CB HIS 27 -1.867 -8.615 -5.813 1.00 5.82 ATOM 286 CG HIS 27 -2.132 -10.006 -5.318 1.00 5.82 ATOM 287 ND1 HIS 27 -1.801 -10.471 -4.066 1.00 5.82 ATOM 288 CE1 HIS 27 -2.217 -11.762 -4.005 1.00 5.82 ATOM 289 NE2 HIS 27 -2.790 -12.155 -5.127 1.00 5.82 ATOM 290 CD2 HIS 27 -2.734 -11.047 -5.952 1.00 5.82 ATOM 291 C HIS 27 -2.455 -6.164 -5.813 1.00 5.22 ATOM 292 O HIS 27 -1.404 -5.969 -6.426 1.00 5.22 ATOM 293 N CYS 28 -3.385 -5.194 -5.634 1.00 4.01 ATOM 295 CA CYS 28 -3.231 -3.858 -6.143 1.00 4.01 ATOM 296 CB CYS 28 -4.416 -3.406 -7.021 1.00 4.58 ATOM 297 SG CYS 28 -4.251 -1.704 -7.646 1.00 4.58 ATOM 298 C CYS 28 -3.100 -2.893 -5.010 1.00 4.01 ATOM 299 O CYS 28 -3.919 -2.890 -4.088 1.00 4.01 ATOM 300 N VAL 29 -2.029 -2.066 -5.056 1.00 4.01 ATOM 302 CA VAL 29 -1.788 -1.066 -4.047 1.00 4.01 ATOM 303 CB VAL 29 -0.477 -1.233 -3.289 1.00 4.58 ATOM 304 CG1 VAL 29 -0.312 -0.104 -2.250 1.00 4.58 ATOM 305 CG2 VAL 29 -0.428 -2.626 -2.627 1.00 4.58 ATOM 306 C VAL 29 -1.811 0.250 -4.782 1.00 4.01 ATOM 307 O VAL 29 -1.081 0.442 -5.757 1.00 4.01 ATOM 308 N GLU 30 -2.687 1.168 -4.314 1.00 4.01 ATOM 310 CA GLU 30 -2.854 2.478 -4.888 1.00 4.01 ATOM 311 CB GLU 30 -4.305 2.738 -5.341 1.00 4.58 ATOM 312 CG GLU 30 -4.774 1.878 -6.523 1.00 4.58 ATOM 313 CD GLU 30 -6.224 2.180 -6.918 1.00 4.58 ATOM 314 OE1 GLU 30 -6.893 3.077 -6.334 1.00 4.58 ATOM 315 OE2 GLU 30 -6.697 1.465 -7.838 1.00 4.58 ATOM 316 C GLU 30 -2.547 3.457 -3.794 1.00 4.01 ATOM 317 O GLU 30 -3.270 3.536 -2.799 1.00 4.01 ATOM 318 N VAL 31 -1.431 4.202 -3.945 1.00 4.01 ATOM 320 CA VAL 31 -1.022 5.182 -2.979 1.00 4.01 ATOM 321 CB VAL 31 0.447 5.085 -2.617 1.00 4.58 ATOM 322 CG1 VAL 31 0.812 6.180 -1.605 1.00 4.58 ATOM 323 CG2 VAL 31 0.728 3.684 -2.049 1.00 4.58 ATOM 324 C VAL 31 -1.333 6.534 -3.557 1.00 4.01 ATOM 325 O VAL 31 -0.807 6.913 -4.603 1.00 4.01 ATOM 326 N ARG 32 -2.215 7.287 -2.866 1.00 5.22 ATOM 328 CA ARG 32 -2.592 8.601 -3.295 1.00 5.22 ATOM 329 CB ARG 32 -4.080 8.908 -3.035 1.00 5.82 ATOM 330 CG ARG 32 -5.014 7.994 -3.838 1.00 5.82 ATOM 331 CD ARG 32 -6.497 8.142 -3.497 1.00 5.82 ATOM 332 NE ARG 32 -7.310 7.348 -4.473 1.00 5.82 ATOM 334 CZ ARG 32 -7.506 5.995 -4.356 1.00 5.82 ATOM 335 NH1 ARG 32 -8.318 5.383 -5.265 1.00 5.82 ATOM 338 NH2 ARG 32 -6.912 5.244 -3.381 1.00 5.82 ATOM 341 C ARG 32 -1.717 9.572 -2.571 1.00 5.22 ATOM 342 O ARG 32 -1.811 9.726 -1.350 1.00 5.22 ATOM 343 N CYS 33 -0.843 10.250 -3.343 1.00 5.22 ATOM 345 CA CYS 33 0.078 11.214 -2.814 1.00 5.22 ATOM 346 CB CYS 33 1.556 10.874 -3.100 1.00 5.82 ATOM 347 SG CYS 33 2.073 9.258 -2.448 1.00 5.82 ATOM 348 C CYS 33 -0.204 12.554 -3.425 1.00 5.22 ATOM 349 O CYS 33 -0.976 12.678 -4.380 1.00 5.22 ATOM 350 N SER 34 0.428 13.602 -2.849 1.00 5.22 ATOM 352 CA SER 34 0.291 14.967 -3.289 1.00 5.22 ATOM 353 CB SER 34 1.027 15.951 -2.367 1.00 5.82 ATOM 354 OG SER 34 0.430 15.940 -1.079 1.00 5.82 ATOM 356 C SER 34 0.852 15.144 -4.675 1.00 5.22 ATOM 357 O SER 34 0.280 15.889 -5.472 1.00 5.22 ATOM 358 N ASP 35 1.973 14.441 -4.989 1.00 5.22 ATOM 360 CA ASP 35 2.618 14.529 -6.276 1.00 5.22 ATOM 361 CB ASP 35 3.985 13.797 -6.313 1.00 5.82 ATOM 362 CG ASP 35 5.008 14.479 -5.411 1.00 5.82 ATOM 363 OD1 ASP 35 5.174 15.726 -5.490 1.00 5.82 ATOM 364 OD2 ASP 35 5.638 13.746 -4.605 1.00 5.82 ATOM 365 C ASP 35 1.768 13.892 -7.338 1.00 5.22 ATOM 366 O ASP 35 1.467 14.540 -8.343 1.00 5.22 ATOM 367 N THR 36 1.338 12.623 -7.116 1.00 5.22 ATOM 369 CA THR 36 0.520 11.892 -8.057 1.00 5.22 ATOM 370 CB THR 36 1.251 11.570 -9.369 1.00 5.82 ATOM 371 CG2 THR 36 2.441 10.612 -9.139 1.00 5.82 ATOM 372 OG1 THR 36 0.359 11.028 -10.333 1.00 5.82 ATOM 374 C THR 36 -0.003 10.623 -7.414 1.00 5.22 ATOM 375 O THR 36 0.367 10.272 -6.289 1.00 5.22 ATOM 376 N LYS 37 -0.929 9.936 -8.126 1.00 4.01 ATOM 378 CA LYS 37 -1.490 8.693 -7.684 1.00 4.01 ATOM 379 CB LYS 37 -2.920 8.472 -8.211 1.00 4.58 ATOM 380 CG LYS 37 -3.628 7.230 -7.675 1.00 4.58 ATOM 381 CD LYS 37 -5.033 7.077 -8.245 1.00 4.58 ATOM 382 CE LYS 37 -5.774 5.866 -7.701 1.00 4.58 ATOM 383 NZ LYS 37 -7.111 5.759 -8.315 1.00 4.58 ATOM 387 C LYS 37 -0.567 7.628 -8.224 1.00 4.01 ATOM 388 O LYS 37 -0.385 7.491 -9.438 1.00 4.01 ATOM 389 N TYR 38 0.061 6.875 -7.298 1.00 4.01 ATOM 391 CA TYR 38 0.981 5.817 -7.617 1.00 4.01 ATOM 392 CB TYR 38 2.124 5.650 -6.579 1.00 4.58 ATOM 393 CG TYR 38 3.031 6.837 -6.574 1.00 4.58 ATOM 394 CD1 TYR 38 2.794 7.884 -5.676 1.00 4.58 ATOM 395 CE1 TYR 38 3.628 9.004 -5.651 1.00 4.58 ATOM 396 CZ TYR 38 4.709 9.090 -6.529 1.00 4.58 ATOM 397 OH TYR 38 5.550 10.225 -6.506 1.00 4.58 ATOM 399 CE2 TYR 38 4.960 8.044 -7.422 1.00 4.58 ATOM 400 CD2 TYR 38 4.123 6.923 -7.445 1.00 4.58 ATOM 401 C TYR 38 0.246 4.512 -7.589 1.00 4.01 ATOM 402 O TYR 38 -0.442 4.210 -6.617 1.00 4.01 ATOM 403 N THR 39 0.347 3.715 -8.672 1.00 4.01 ATOM 405 CA THR 39 -0.276 2.422 -8.682 1.00 4.01 ATOM 406 CB THR 39 -1.098 2.146 -9.908 1.00 4.58 ATOM 407 CG2 THR 39 -1.755 0.761 -9.765 1.00 4.58 ATOM 408 OG1 THR 39 -2.128 3.120 -10.010 1.00 4.58 ATOM 410 C THR 39 0.960 1.577 -8.620 1.00 4.01 ATOM 411 O THR 39 1.715 1.470 -9.591 1.00 4.01 ATOM 412 N LEU 40 1.195 0.982 -7.434 1.00 4.01 ATOM 414 CA LEU 40 2.363 0.189 -7.187 1.00 4.01 ATOM 415 CB LEU 40 2.632 0.007 -5.683 1.00 4.58 ATOM 416 CG LEU 40 3.053 1.327 -4.991 1.00 4.58 ATOM 417 CD1 LEU 40 3.117 1.164 -3.475 1.00 4.58 ATOM 418 CD2 LEU 40 4.352 1.916 -5.564 1.00 4.58 ATOM 419 C LEU 40 2.327 -1.132 -7.878 1.00 4.01 ATOM 420 O LEU 40 3.340 -1.554 -8.437 1.00 4.01 ATOM 421 N CYS 41 1.156 -1.799 -7.874 1.00 4.01 ATOM 423 CA CYS 41 1.020 -3.076 -8.519 1.00 4.01 ATOM 424 CB CYS 41 1.070 -4.276 -7.549 1.00 4.58 ATOM 425 SG CYS 41 0.952 -3.819 -5.792 1.00 4.58 ATOM 426 C CYS 41 -0.317 -3.103 -9.253 1.00 4.01 ATOM 427 O CYS 41 -1.263 -2.373 -8.850 1.00 4.01 ATOM 428 OXT CYS 41 -0.407 -3.860 -10.254 1.00 4.58 TER END